text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724482 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: project name

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724482_concoct_14


status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724533 of study SRP043213.

text: fjord

text: not provided

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724533_binner12_Refined_10

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719693 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Woesearchaeota archaeon

characteristic: organism

characteristic: project name

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719693_concoct_57


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724382 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Desulfobacula sp.

characteristic: sample derived from

text: uncultured Desulfobacula sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724382_concoct_50


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724315 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724315_concoct_90

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724388 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724388_binner13_Refined_21


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724190 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured euryarchaeote

characteristic: sample derived from

text: uncultured euryarchaeote

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724190_concoct_66


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Oceanospirillaceae bacterium

text: uncultured Oceanospirillaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724190_maxbin2_8

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Anaerolineae bacterium

characteristic: organism

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: project name

text: uncultured Anaerolineae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724533_binner12_Refined_93


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Saprospirales bacterium

characteristic: sample derived from

text: uncultured Saprospirales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724190_metabat2_74


text: EMG

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriaceae bacterium

text: uncultured Flavobacteriaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724190_concoct_1

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725054 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725054_concoct_7


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3723783 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Peregrinibacteria bacterium

characteristic: sample derived from

text: Illumina Genome Analyzer II

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3723783_concoct_125


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Cellvibrionales bacterium

text: uncultured Cellvibrionales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724190_binner13_Refined_36

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

characteristic: organism

characteristic: project name

text: uncultured Flavobacteriales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724190_concoct_87


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725015 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Gemmatimonadales bacterium

characteristic: sample derived from

text: uncultured Gemmatimonadales bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725015_concoct_96


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724190 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured euryarchaeote

text: uncultured euryarchaeote

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724190_concoct_71

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724533 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: organism

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724533_concoct_68


text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724469 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724469_concoct_20


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724469_concoct_0

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724468 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724468_binner13_Refined_42


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724468_concoct_123


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724470 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Planctomycetaceae bacterium

text: uncultured Planctomycetaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724470_binner12_Refined_16

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724469_binner13_Refined_43


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724533_concoct_107


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Polaribacter sp.

text: uncultured Polaribacter sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724533_concoct_70

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724307 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724307_binner12_Refined_73


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724307_metabat2_32


text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724308 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724308_concoct_24

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724466 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured euryarchaeote

characteristic: organism

characteristic: project name

text: uncultured euryarchaeote

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724466_concoct_129


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724482 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724482_concoct_83


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725731 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Bathyarchaeota archaeon

text: Candidatus Bathyarchaeota archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3725731_binner12_Refined_10

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724648 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

characteristic: project name

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724648_binner13_Refined_62


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724388 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724388_binner13_Refined_7


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724382 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724382_concoct_98

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724644 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Diapherotrites archaeon

characteristic: organism

characteristic: project name

text: Candidatus Diapherotrites archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724644_metabat2_57


text: EMG

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724312 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Bacteriovoracaceae bacterium

characteristic: sample derived from

text: uncultured Bacteriovoracaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724312_binner13_Refined_101


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724482 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Halieaceae bacterium

text: uncultured Halieaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724482_metabat2_66

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724468 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Woesearchaeota archaeon

characteristic: organism

characteristic: project name

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724468_binner13_Refined_41


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured archaeon

characteristic: sample derived from

text: uncultured archaeon

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724644_binner123_Refined_15


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724646 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724646_binner13_Refined_7

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724644_binner12_Refined_54


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719574 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Cellvibrionales bacterium

characteristic: sample derived from

text: uncultured Cellvibrionales bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719574_binner12_Refined_20


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719567 of study SRP043213.

text: fjord

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Halieaceae bacterium

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

text: uncultured Halieaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3719567_binner12_Refined_41

characteristic: title


text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Lentibacter algarum

characteristic: organism

characteristic: project name

text: Lentibacter algarum

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719574_concoct_30


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719647 of study SRP043213.

text: fjord

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Woesearchaeota archaeon

characteristic: sample derived from

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719647_binner13_Refined_23


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719625 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Opitutales bacterium

text: uncultured Opitutales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3719625_metabat2_74

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719573 of study SRP043213.

text: fjord

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

characteristic: project name

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719573_binner23_Refined_25


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Planctomycetaceae bacterium

characteristic: sample derived from

text: uncultured Planctomycetaceae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719625_binner23_Refined_95


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

text: fjord

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Cellvibrionales bacterium

text: uncultured Cellvibrionales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3719574_binner12_Refined_93

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Nitrosomonadaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Nitrosomonadaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719567_concoct_52


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719655 of study SRP043213.

text: fjord

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured archaeon

characteristic: sample derived from

text: uncultured archaeon

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719655_concoct_132


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724508 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Phycisphaerae bacterium

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

text: uncultured Phycisphaerae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724508_concoct_121

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724482 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Rhodospirillaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Rhodospirillaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724482_metabat2_24


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Gracilibacteria bacterium

characteristic: sample derived from

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724508_metabat2_99


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724310 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724310_concoct_54

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724311 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

characteristic: organism

characteristic: project name

text: uncultured Flavobacteriales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724311_concoct_65


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3723783 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina Genome Analyzer II

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3723783_binner12_Refined_81


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719695 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Nitrospina sp.

text: uncultured Nitrospina sp.

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3719695_binner13_Refined_68

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724469 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Flavobacteriales bacterium

characteristic: organism

characteristic: project name

text: uncultured Flavobacteriales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724469_concoct_65


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Marinovum sp.

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: sample derived from

text: uncultured Marinovum sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724311_metabat2_42


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724312 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Oligoflexia bacterium

text: uncultured Oligoflexia bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724312_concoct_147

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

characteristic: project name

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724311_concoct_69


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724646 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured archaeon

characteristic: sample derived from

text: uncultured archaeon

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724646_concoct_91


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724468 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724468_binner123_Refined_2

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Rhodospirillaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Rhodospirillaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724312_binner123_Refined_40


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724465 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured archaeon

characteristic: sample derived from

text: uncultured archaeon

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724465_binner13_Refined_1


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724467 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured archaeon

text: uncultured archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724467_binner13_Refined_15

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured archaeon

characteristic: organism

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: project name

text: uncultured archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724467_concoct_23


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724464 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724464_concoct_21


text: EMG

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725353 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Thioglobus sp.

text: uncultured Candidatus Thioglobus sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3725353_binner23_Refined_32

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725353_binner12_Refined_46


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719696 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719696_concoct_30


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3723783 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured archaeon

text: uncultured archaeon

text: Illumina Genome Analyzer II

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3723783_binner12_Refined_65

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719708 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719708_concoct_86


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719572 of study SRP043213.

text: fjord

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719572_binner13_Refined_37


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724566 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Actinomarinales bacterium

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724566_metabat2_9

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724646 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured archaeon

characteristic: organism

characteristic: project name

text: uncultured archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724646_binner123_Refined_1


text: EMG

text: public

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725731 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

characteristic: sample derived from

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725731_binner123_Refined_28


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725354 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3725354_binner13_Refined_58

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719656 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Planctomicrobium sp.

characteristic: organism

characteristic: project name

text: uncultured Planctomicrobium sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719656_concoct_17


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3723783 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina Genome Analyzer II

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3723783_concoct_58


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724308 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Phycisphaerae bacterium

text: uncultured Phycisphaerae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724308_concoct_88

characteristic: title