characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724382 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Candidatus Peregrinibacteria bacterium

characteristic: organism

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: project name

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724382_metabat2_42


status: PUBLIC

tag: attribute

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

unit: DD

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured archaeon

characteristic: sample derived from

text: uncultured archaeon

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724382_binner123_Refined_52

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724456 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

characteristic: project name

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724456_binner123_Refined_33


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3723783 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina Genome Analyzer II

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3723783_metabat2_5


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724190 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured euryarchaeote

text: uncultured euryarchaeote

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724190_metabat2_66

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724533 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724533_concoct_112


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725726 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Woesearchaeota archaeon

characteristic: sample derived from

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725726_binner13_Refined_37


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725730 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured archaeon

text: uncultured archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3725730_binner123_Refined_2

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725729 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: organism

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725729_binner12_Refined_44


text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719657 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: Canada

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Opitutae bacterium

characteristic: sample derived from

text: uncultured Opitutae bacterium

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719657_binner13_Refined_18


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724533_concoct_81

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719656 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Opitutae bacterium

characteristic: organism

characteristic: project name

text: uncultured Opitutae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719656_binner13_Refined_90


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Helicobacteraceae bacterium

characteristic: sample derived from

text: uncultured Helicobacteraceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725730_concoct_60


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724644 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724644_metabat2_40

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724508 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured archaeon

characteristic: organism

characteristic: project name

text: uncultured archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724508_concoct_38


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719695 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured archaeon

characteristic: sample derived from

text: uncultured archaeon

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719695_concoct_61


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719647 of study SRP043213.

text: fjord

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Diapherotrites archaeon

text: Candidatus Diapherotrites archaeon

text: Illumina HiSeq 2500

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3719647_concoct_38

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719691 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719691_binner12_Refined_12


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725355 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured euryarchaeote

characteristic: sample derived from

text: uncultured euryarchaeote

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725355_binner12_Refined_45


text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724468 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724468_binner23_Refined_41

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724309 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Woesearchaeota archaeon

characteristic: organism

characteristic: project name

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724309_binner123_Refined_41


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724648 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured euryarchaeote

characteristic: sample derived from

text: uncultured euryarchaeote

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724648_concoct_65


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724382 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724382_binner23_Refined_35

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724309_metabat2_26


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724310 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Woesearchaeota archaeon

characteristic: sample derived from

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724310_binner12_Refined_27


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725731 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Sulfurimonas sp.

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

text: uncultured Sulfurimonas sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3725731_concoct_121

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

text: EBI-EMG

characteristic: broker name

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724309_binner13_Refined_27


text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724469 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724469_concoct_68


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724482 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724482_concoct_65

characteristic: title


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Candidatus Woesearchaeota archaeon

characteristic: organism

characteristic: project name

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3725731_concoct_103


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3719629 of study SRP043213.

text: fjord

text: Canada

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Woesearchaeota archaeon

characteristic: sample derived from

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3719629_concoct_102


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3725726 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Gemmatimonadales bacterium

text: uncultured Gemmatimonadales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3725726_concoct_95

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724644 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: Candidatus Woesearchaeota archaeon

characteristic: organism

characteristic: project name

text: Candidatus Woesearchaeota archaeon

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724644_metabat2_25


text: EMG

text: public

text: default

characteristic: binning software

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724645 of study SRP043213.

characteristic: description

text: fjord

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: marine

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Thioglobus sp.

characteristic: sample derived from

text: uncultured Candidatus Thioglobus sp.

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR3724645_maxbin2_1


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: water

text: EBI-EMG

characteristic: broker name

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR3724646 of study SRP043213.

text: fjord

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

text: marine metagenome

text: marine

text: marine metagenome

text: uncultured Elusimicrobiales bacterium

text: Saanich Inlet is a seasonally anoxic fjord opening to the Strait of Georgia on the southeast coast of Vancouver Island, British Columbia. It is approximately 24 kilometers long with a maximal basin depth of 234 meters and receives limited freshwater input from the surrounding watershed. A shallow glacial entrance sill 75 meters deep restricts circulation within interior and basin waters for most of the year. During spring and summer months, restricted circulation combined with high levels of primary productivity in surface waters lead to oxygen loss with concomitant water column stratification indicated by accumulation of methane (CH4), Ammonia (NH3) and Hydrogen Sulfide (H2S). In late summer and fall, oxygenated nutrient-rich ocean waters upwelling through the Strait cascade into Saanich Inlet shoaling anoxic bottom waters upward and transforming the redox chemistry of the water column. This process is stable on decadal time scales exhibiting a relatively narrow deviation in the depth distribution of the oxycline at different times of year. The recurring seasonal development of water column anoxia followed by deep-water renewal enables spatiotemporal profiling of microbial community structure and function across a wide range of water column redox states.

text: uncultured Elusimicrobiales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR3724646_binner23_Refined_37

characteristic: title


CP

text: Durham University

text: public

text: CP

text: Sarah Smith Robert Cavaye

characteristic: collection date

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Durham County Hall pond

characteristic: geographic location (region and locality)

text: Escherichia phage vB_Eco_CP

characteristic: organism

text: Escherichia phage vB_Eco_CP


SAP

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Durham University

characteristic: INSDC center name

text: public

text: SAP

text: Charlotte West Jonathan Townson

text: United Kingdom

text: Durham University Sr Aidens pond

text: Escherichia phage vB_Eco_SAP

text: Escherichia phage vB_Eco_SAP


text: Durham University

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Edward Hislop Ellie Hill

text: United Kingdom

text: Durham Maiden Castle Jetty

text: Escherichia phage vB_Eco_EH2

text: Escherichia phage vB_Eco_EH2


EL

text: Durham University

text: public

text: EL

text: Elizabeth Walker Kael Lee

text: United Kingdom

text: Durham Botanical Garden pond

text: Escherichia phage vB_Eco_EL

text: Escherichia phage vB_Eco_EL


text: ANSES

text: public

text: Chlamydiifrater volucris

text: France

text: healthy

characteristic: host health state

text: Phoenicopterus roseus 15-2067_O09

characteristic: host scientific name

characteristic: isolate

text: cloacal swab

text: Chlamydiifrater volucris

text: Chlamydiifrater volucris


text: ANSES

text: public

text: Chlamydiifrater volucris

text: France

text: healthy

text: Phoenicopterus roseus 15-2067_O77

text: cloacal swab

text: Chlamydiifrater volucris

text: Chlamydiifrater volucris


text: Comenius University, Faculty of Mathematics, Physics and Informatics

text: public

text: Candida parapsilosis strain  SR23 (CBS 7157)

text: France

text: contaminated culture of Saccharomyces cerevisiae

text: Candida parapsilosis

text: Candida parapsilosis

text: SR23, CBS 7157

characteristic: strain


text: Department of Plant and Microbial Biology

text: public

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.1a.Acidovorax defluvii

text: fresh water

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: lake microbial community

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Acidovorax defluvii

characteristic: project name

characteristic: sample derived from

text: Acidovorax defluvii

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: lake microbial community


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

text: freshwater biome

characteristic: collection date

text: CheckM v1.2.2

text: C6.microcosm.1a.Aeromonas bestiarum

characteristic: description

text: fresh water

text: Switzerland

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: Aeromonas bestiarum

characteristic: organism

text: Aeromonas bestiarum

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community

characteristic: title


text: public

text: metaSPAdes v3.13.1

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.1b.Acidovorax defluvii

text: fresh water

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: lake microbial community

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Acidovorax defluvii

text: Acidovorax defluvii

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

text: freshwater biome

characteristic: collection date

text: CheckM v1.2.2

text: C6.microcosm.1b.Aeromonas bestiarum

text: fresh water

text: Switzerland

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: Aeromonas bestiarum

characteristic: project name

characteristic: sample derived from

text: Aeromonas bestiarum

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: lake microbial community


text: public

text: metaSPAdes v3.13.1

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.2.Pseudomonas rhodesiae

characteristic: description

text: fresh water

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: Pseudomonas rhodesiae

characteristic: organism

text: Pseudomonas rhodesiae

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

text: freshwater biome

characteristic: collection date

text: CheckM v1.2.2

text: C6.microcosm.3.Acidovorax facilis

text: fresh water

text: Switzerland

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: lake microbial community

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Acidovorax facilis

text: Acidovorax facilis

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community


text: public

text: metaSPAdes v3.13.1

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.3.Acidovorax sp001428665

characteristic: description

text: fresh water

characteristic: environmental medium

text: Switzerland

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: bacterioplankton metagenome

characteristic: project name

characteristic: sample derived from

text: bacterioplankton metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: lake microbial community


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

text: freshwater biome

characteristic: collection date

text: CheckM v1.2.2

text: C6.microcosm.3.Aeromonas caviae

text: fresh water

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: Aeromonas caviae

characteristic: organism

text: Aeromonas caviae

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community

characteristic: title


text: public

text: metaSPAdes v3.13.1

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.5.Acidovorax sp016783915

characteristic: description

text: fresh water

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: lake microbial community

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: bacterioplankton metagenome

text: bacterioplankton metagenome

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

text: freshwater biome

characteristic: collection date

text: CheckM v1.2.2

text: C6.microcosm.6.Acidovorax soli

text: fresh water

text: Switzerland

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: Acidovorax soli

characteristic: project name

characteristic: sample derived from

text: Acidovorax soli

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: lake microbial community


text: public

text: metaSPAdes v3.13.1

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.7.Acidovorax defluvii

characteristic: description

text: fresh water

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: Acidovorax defluvii

characteristic: organism

text: Acidovorax defluvii

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

text: freshwater biome

characteristic: collection date

text: CheckM v1.2.2

text: C6.microcosm.7.Aeromonas hydrophila

text: fresh water

text: Switzerland

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: lake microbial community

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Aeromonas hydrophila

text: Aeromonas hydrophila

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community


text: public

text: metaSPAdes v3.13.1

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.7.Pseudomonas sp019747075

characteristic: description

text: fresh water

characteristic: environmental medium

text: Switzerland

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: bacterioplankton metagenome

characteristic: project name

characteristic: sample derived from

text: bacterioplankton metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: lake microbial community


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

text: freshwater biome

characteristic: collection date

text: CheckM v1.2.2

text: C6.microcosm.9.Acidovorax sp004210805

text: fresh water

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: bacterioplankton metagenome

characteristic: organism

text: bacterioplankton metagenome

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community

characteristic: title


text: public

text: metaSPAdes v3.13.1

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.11.Pararheinheimera texasensis

characteristic: description

text: fresh water

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: lake microbial community

text: freshwater lake biome

characteristic: local environmental context

text: lake water metagenome

characteristic: metagenomic source

text: Rheinheimera texasensis

text: Rheinheimera texasensis

text: Illumina NovaSeq 6000

text: multi-marker approach

text: lake microbial community


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: metaSPAdes v3.13.1

characteristic: assembly software

text: coverage

text: freshwater biome

characteristic: collection date

text: CheckM v1.2.2

text: C6.microcosm.12.Acidovorax sp003663825

text: fresh water

text: Switzerland

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

text: bacterioplankton metagenome

characteristic: project name

characteristic: sample derived from

text: bacterioplankton metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: lake microbial community


text: public

text: metaSPAdes v3.13.1

text: coverage

characteristic: binning parameters

characteristic: binning software

text: freshwater biome

characteristic: broad-scale environmental context

characteristic: completeness score

text: CheckM v1.2.2

characteristic: completeness software

characteristic: contamination score

text: C6.microcosm.12.Duganella fentianensis

characteristic: description

text: fresh water

characteristic: environmental medium

text: Switzerland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: metagenome-assembled genome

text: lake microbial community

text: freshwater lake biome

text: lake water metagenome

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