characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: description

text: tara

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Legionellales bacterium

text: uncultured Legionellales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR594288_concoct_117

characteristic: title


status: PUBLIC

tag: attribute

text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR594288 of study ERP001737.

text: tara

text: not provided

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured bacterium

characteristic: organism

text: Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.

characteristic: project name

characteristic: sample derived from

text: uncultured bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR594288_concoct_13


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: description

text: tara

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR594288_concoct_130

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: tara

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

characteristic: project name

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: ERR594288_concoct_56


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: description

text: tara

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

characteristic: sample derived from

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR594288_concoct_131


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: tara

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Alphaproteobacteria bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR594288_maxbin2_40

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: description

text: tara

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Legionellales bacterium

characteristic: organism

characteristic: project name

text: uncultured Legionellales bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: ERR594288_concoct_85


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: tara

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Rhodobiaceae bacterium

characteristic: sample derived from

text: uncultured Rhodobiaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR594288_metabat2_117


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR594289 of study ERP001737.

characteristic: description

text: tara

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Halomonas salina

text: Halomonas salina

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR594289_binner12_Refined_10

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: tara

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Oceanospirillaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Oceanospirillaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: ERR594289_binner12_Refined_121


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

characteristic: description

text: tara

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Alcanivorax profundi

characteristic: sample derived from

text: Alcanivorax profundi

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR594289_binner13_Refined_112


text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR594348 of study ERP001737.

text: tara

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Candidatus Nitrosopelagicus sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR594348_concoct_2

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR594349 of study ERP001737.

characteristic: description

text: tara

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Acidimicrobiaceae bacterium

characteristic: organism

text: Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.

characteristic: project name

text: uncultured Acidimicrobiaceae bacterium

text: Illumina HiSeq 2000

text: multi-marker approach

text: Metagenome-assembled genome: ERR594349_concoct_101


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

text: not provided

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: tara

text: not provided

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Acidimicrobiaceae bacterium

characteristic: sample derived from

text: uncultured Acidimicrobiaceae bacterium

text: Illumina HiSeq 2000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: ERR594349_concoct_58


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

text: not provided

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR594299 of study ERP001737.

characteristic: description

text: tara

characteristic: environmental medium

text: not provided

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Pseudoalteromonas sp.

text: uncultured Pseudoalteromonas sp.

text: Illumina HiSeq 2000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: ERR594299_metabat2_4

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479897 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: Bathycoccus prasinos

characteristic: organism

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

characteristic: project name

text: Bathycoccus prasinos

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479897_concoct_37


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Ostreococcus lucimarinus CCE9901

characteristic: sample derived from

text: Ostreococcus lucimarinus CCE9901

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479897_concoct_2


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480113 of study SRP278138.

text: go-ship

text: Southern Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: Fragilariopsis cylindrus CCMP1102

text: Fragilariopsis cylindrus CCMP1102

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480113_metabat2_3

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479650 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Synechococcus sp.

characteristic: organism

characteristic: project name

text: uncultured Synechococcus sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479650_maxbin2_1


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479654 of study SRP278138.

text: go-ship

text: Pacific Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured euryarchaeote

characteristic: sample derived from

text: uncultured euryarchaeote

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479654_binner23_Refined_9


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479651 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479651_binner13_Refined_3

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479655 of study SRP278138.

text: go-ship

text: Pacific Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Candidatus Poseidoniales archaeon

characteristic: organism

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479655_concoct_3


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479658 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479658_concoct_15


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479664 of study SRP278138.

text: go-ship

text: Pacific Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479664_binner13_Refined_4

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: description

text: go-ship

characteristic: environmental medium

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

characteristic: organism

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479664_binner13_Refined_6


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479693 of study SRP278138.

text: go-ship

text: Indian Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479693_maxbin2_3


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479724 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Actinomarinales bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479724_metabat2_4

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479701 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

characteristic: organism

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479701_binner12_Refined_3


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479712 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Phycisphaerales bacterium

characteristic: sample derived from

text: uncultured Phycisphaerales bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479712_concoct_33


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479734 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured bacterium

text: uncultured bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479734_concoct_61

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479745 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479745_binner123_Refined_22


text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Flavobacteriaceae bacterium

characteristic: sample derived from

text: uncultured Flavobacteriaceae bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479745_binner12_Refined_43


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Flavobacteriales bacterium

text: uncultured Flavobacteriales bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479745_binner12_Refined_1

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured euryarchaeote

characteristic: organism

characteristic: project name

text: uncultured euryarchaeote

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479745_binner12_Refined_27


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Opitutales bacterium

characteristic: sample derived from

text: uncultured Opitutales bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479745_binner12_Refined_5


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Rhodobiaceae bacterium

text: uncultured Rhodobiaceae bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479745_concoct_73

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479747 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479747_maxbin2_7


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Candidatus Poseidoniales archaeon

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479745_concoct_51


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479756 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured euryarchaeote

text: uncultured euryarchaeote

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479756_binner123_Refined_11

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479762 of study SRP278138.

text: go-ship

text: Indian Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479762_binner12_Refined_5


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479755 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

characteristic: sample derived from

text: uncultured bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479755_concoct_25


text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479766 of study SRP278138.

text: go-ship

text: Indian Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Candidatus Actinomarinales bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479766_binner12_Refined_2

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479765 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479765_concoct_1


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479777 of study SRP278138.

text: go-ship

text: Indian Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured euryarchaeote

characteristic: sample derived from

text: uncultured euryarchaeote

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479777_maxbin2_4


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480122 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Southern Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Phycisphaera sp.

text: uncultured Phycisphaera sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480122_binner12_Refined_3

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480125 of study SRP278138.

text: go-ship

text: Southern Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Cryomorphaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Cryomorphaceae bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480125_binner13_Refined_15


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: description

text: go-ship

characteristic: environmental medium

text: Southern Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Planktomarina sp.

characteristic: sample derived from

text: uncultured Planktomarina sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480122_binner123_Refined_1


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480126 of study SRP278138.

text: go-ship

text: Southern Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Rhodobacterales bacterium

text: uncultured Rhodobacterales bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480126_binner23_Refined_5

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480127 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Southern Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Rhodobacterales bacterium

characteristic: organism

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

characteristic: project name

text: uncultured Rhodobacterales bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480127_binner123_Refined_11


text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480130 of study SRP278138.

text: go-ship

text: Pacific Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Pseudoalteromonas sp.

characteristic: sample derived from

text: uncultured Pseudoalteromonas sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480130_binner123_Refined_4


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480153 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Poseidoniales archaeon

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480153_binner12_Refined_1

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480143 of study SRP278138.

text: go-ship

text: Indian Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Ponticaulis sp.

characteristic: organism

characteristic: project name

text: uncultured Ponticaulis sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480143_binner123_Refined_3


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480152 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480152_concoct_10


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480154 of study SRP278138.

text: go-ship

text: Indian Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Synechococcus sp.

text: uncultured Synechococcus sp.

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480154_binner12_Refined_13

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

text: uncultured bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480154_binner12_Refined_4


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480283 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Bacteriovorax sp.

characteristic: sample derived from

text: uncultured Bacteriovorax sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480283_concoct_15


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480281 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480281_concoct_23

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480285 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured euryarchaeote

characteristic: organism

characteristic: project name

text: uncultured euryarchaeote

text: Illumina HiSeq 4000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480285_binner12_Refined_2


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: MGnify-genomes-generation-pipeline_v1.0.0

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480288 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Synechococcus sp.

characteristic: sample derived from

text: uncultured Synechococcus sp.

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480288_maxbin2_3


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480289 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Candidatus Poseidoniales archaeon

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480289_binner123_Refined_4

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480291 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

characteristic: organism

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480291_metabat2_2


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480294 of study SRP278138.

text: go-ship

text: Pacific Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480294_binner12_Refined_5


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480293 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

text: uncultured bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480293_maxbin2_18

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480297 of study SRP278138.

text: go-ship

text: Pacific Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured euryarchaeote

characteristic: organism

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

characteristic: project name

text: uncultured euryarchaeote

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480297_binner12_Refined_18


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480295 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480295_concoct_32


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480306 of study SRP278138.

text: go-ship

text: Pacific Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480306_binner13_Refined_1

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480310 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Candidatus Poseidoniales archaeon

characteristic: organism

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480310_binner123_Refined_2


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: go-ship

text: Pacific Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480310_binner13_Refined_1


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: description

text: go-ship

characteristic: environmental medium

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Thermoplasmata archaeon

text: uncultured Thermoplasmata archaeon

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480310_binner13_Refined_4

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480314 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

characteristic: organism

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480314_binner12_Refined_6


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480313 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Pacific Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: sample derived from

text: uncultured bacterium

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480313_concoct_26


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480315 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480315_binner12_Refined_19

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Puniceicoccaceae bacterium

characteristic: organism

characteristic: project name

text: uncultured Puniceicoccaceae bacterium

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12480315_binner12_Refined_20


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479822 of study SRP278138.

text: go-ship

text: Indian Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Candidatus Actinomarinales bacterium

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479822_metabat2_1


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479827 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured euryarchaeote

text: uncultured euryarchaeote

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479827_binner12_Refined_14

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479841 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured Candidatus Poseidoniales archaeon

characteristic: organism

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479841_metabat2_14


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479874 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479874_concoct_20


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479834 of study SRP278138.

text: go-ship

text: Indian Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: uncultured euryarchaeote

text: uncultured euryarchaeote

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12479834_binner12_Refined_1

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12479876 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

text:
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal time scale. The program covers a suite of physical (light, heat, currents, water column structure, etc.) and chemical (nutrients, oxygen, dissolved organic and inorganic carbon, pH, etc.) state variables over the full ocean water column, and in areas of the ocean inaccessible to other platforms. The principal scientific objectives for GO-SHIP are: (1) understanding and documenting the large-scale ocean water property distributions, their changes, and drivers of those changes, and (2) addressing questions of how a future ocean will increase in dissolved inorganic carbon, become more acidified and more stratified, and experience changes in circulation and ventilation processes due to global warming and altered water cycle.

The vision of the biological GO-SHIP initiative, or "Bio-GO-SHIP," is to develop a deep understanding of the link between the physio-chemical environment and global ocean plankton diversity, abundance, and biogeochemical roles in the context of a changing ocean. This will be achieved through systematic, high-quality, and calibrated sampling of marine 'omics products.

In this BioProject, we aim to provide a singular resource for Bio-GO-SHIP 'omics datasets. We also provide appropriate metadata such that the 'omics data may be linked to the broad range of state variables measured by GO-SHIP and associated oceanographic transects.

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR12479876_concoct_12


text: EMG

characteristic: INSDC center name

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

text: MGnify-genomes-generation-pipeline_v1.0.0

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR13122036 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

text: Vibrio rotiferianus

characteristic: sample derived from

text: Vibrio rotiferianus

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR13122036_maxbin2_3


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12480334 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Indian Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Illumina NovaSeq 6000

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR12480334_concoct_30

characteristic: title


text: EMG

characteristic: INSDC center name

text: public

characteristic: assembly quality

characteristic: assembly software

text: default

characteristic: binning parameters

characteristic: binning software

text: water

text: EBI-EMG

characteristic: broker name

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR13122038 of study SRP278138.

text: go-ship

text: Atlantic Ocean

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: marine metagenome

text: ocean

text: marine metagenome

characteristic: organism

characteristic: project name

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR13122038_concoct_26


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: EMG

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: default

text: water

characteristic: broad-scale environmental context

text: EBI-EMG

characteristic: collection date

text: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR13122040 of study SRP278138.

characteristic: description

text: go-ship

characteristic: environmental medium

text: Atlantic Ocean

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: marine metagenome

text: ocean

characteristic: local environmental context

text: marine metagenome

characteristic: metagenomic source

text: Crocosphaera watsonii

characteristic: sample derived from

text: Crocosphaera watsonii

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

text: Metagenome-assembled genome: SRR13122040_maxbin2_2