characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Bedaquiline evolved M. smegmatis strain Line 3

text: NCTC 8159

characteristic: strain


status: PUBLIC

characteristic: External Id

text: RIKEN Center for Biosystems Dynamics Research

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Mycolicibacterium smegmatis

characteristic: organism

text: Identification of mutations conferring resistance to 10 anti-tuberculosis drugs by laboratory evolution of non-pathogenic Mycobacterium on agar plate

characteristic: project name

text: Bedaquiline evolved M. smegmatis strain Line 4

characteristic: sample name

text: NCTC 8159

characteristic: sub strain

characteristic: title

text: type strain of Mycolicibacterium smegmatis

characteristic: type material


characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Thioridazine evolved M. smegmatis strain Line 1

text: NCTC 8159

characteristic: strain


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Thioridazine evolved M. smegmatis strain Line 2

text: NCTC 8159


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Thioridazine evolved M. smegmatis strain Line 3

text: NCTC 8159


text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Thioridazine evolved M. smegmatis strain Line 4

text: NCTC 8159


text: live

text: MIGS.ba

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Linezolid evolved M. smegmatis strain Line 1

text: NCTC 8159


text: live

text: MIGS.ba

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Mycolicibacterium smegmatis

text: Linezolid evolved M. smegmatis strain Line 2

text: NCTC 8159


text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

characteristic: organism

characteristic: project name

text: Linezolid evolved M. smegmatis strain Line 3

text: NCTC 8159


text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Linezolid evolved M. smegmatis strain Line 4

characteristic: sample name

text: NCTC 8159

characteristic: sub strain


text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Meropenem evolved M. smegmatis strain Line 1

text: NCTC 8159

characteristic: title

characteristic: type material


characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Meropenem evolved M. smegmatis strain Line 2

text: NCTC 8159

characteristic: strain


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Meropenem evolved M. smegmatis strain Line 3

text: NCTC 8159


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Meropenem evolved M. smegmatis strain Line 4

text: NCTC 8159


text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Clofazimine evolved M. smegmatis strain Line 1

text: NCTC 8159


text: RIKEN Center for Biosystems Dynamics Research

text: live

text: MIGS.ba

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

text: Clofazimine evolved M. smegmatis strain Line 2

text: NCTC 8159


text: live

text: MIGS.ba

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Mycolicibacterium smegmatis

text: Identification of mutations conferring resistance to 10 anti-tuberculosis drugs by laboratory evolution of non-pathogenic Mycobacterium on agar plate

text: Clofazimine evolved M. smegmatis strain Line 3

text: NCTC 8159


text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Mycolicibacterium smegmatis

characteristic: organism

characteristic: project name

text: Clofazimine evolved M. smegmatis strain Line 4

text: NCTC 8159

text: type strain of Mycolicibacterium smegmatis


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

tag: Namespace:WASHINGTON UNIVERSITY SCHOOL OF MEDICINE

characteristic: Submitter Id

text: Teff

text: house mouse

characteristic: common name

text: EAE

text: no

text: EAE

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


characteristic: External Id

text: WASHINGTON UNIVERSITY SCHOOL OF MEDICINE

text: public

text: Treg

text: house mouse

text: EAE

text: no

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing

characteristic: title


characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: Teff

text: house mouse

text: EAE

text: no

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

characteristic: INSDC status

text: EAE.71521.MOG35_CAR.pln.Treg.1.JY-CACTTGAG-57

text: Treg

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Teff.1.JY-TGACTGAC-57

text: Teff

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Treg.2.JY-CTGTCACT-57

text: Treg

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Teff.2.JY-CGATCGTA-57

text: Teff

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Treg.3.JY-GATGTGCT-57

text: Treg

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Teff.3.JY-GTTGTGCA-57

text: Teff

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Treg.4.JY-GTGTCTGA-57

text: Treg

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Teff.4.JY-GACTGAGA-57

text: Teff

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Treg.5.JY-GATCTCGA-57

text: Treg

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: public

text: EAE.71521.MOG35_CAR.pln.Teff.5.JY-ACGTAGCT-57

text: Teff

text: house mouse

text: EAE

text: EAE

text: Mus musculus

text: Mus musculus

text: pln

text: Trac sequencing


text: GENGS-CBMSO

text: public

text: GENGS-CBMSO

characteristic: broker name

text: Unpaired U1 reads

text: Thermus thermophilus HB27

text: Thermus thermophilus HB27

text: Unpaired U1 reads


text: GENGS-CBMSO

text: public

text: GENGS-CBMSO

text: Unpaired U2 reads

text: Thermus thermophilus HB27

text: Thermus thermophilus HB27

text: Unpaired U2 reads


text: GENGS-CBMSO

text: public

text: GENGS-CBMSO

text: Paired reads

text: Thermus thermophilus HB27

text: Thermus thermophilus HB27

text: Paired reads


text: Institute of Health Carlos III

text: public

tag: Namespace:Institute of Health Carlos III

text: Sandoval Health Center

characteristic: collecting institution

text: not provided

text: Sandoval Health Center

characteristic: collector name

text: sample collected from monkeypox virus infected patients

text: Spain

characteristic: geographic location (country and/or sea)

text: Madrid

characteristic: geographic location (region and locality)

text: human

characteristic: host common name

text: diseased

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: Monkeypox virus

text: Monkeypox virus


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-10-06-2022-13:31:50:547-2658

tag: Namespace:Institute of Pathology, Cantonal Hospital Baselland

characteristic: Submitter Id

text: human

characteristic: common name

text: clinical isolate

text: Control

characteristic: description

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Lung


characteristic: External Id

text: Institute of Pathology, Cantonal Hospital Baselland

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-10-06-2022-13:31:50:547-2665

text: human

text: clinical isolate

text: Control

text: Homo sapiens

text: Homo sapiens

text: Lung

characteristic: title


text: public

text: ena-SAMPLE-TAB-10-06-2022-13:31:50:548-2672

text: human

text: clinical isolate

text: Control

text: Homo sapiens

text: Homo sapiens

text: Lung


text: public

text: ena-SAMPLE-TAB-10-06-2022-13:31:50:548-2679

text: human

text: clinical isolate

text: Control

text: Homo sapiens

text: Homo sapiens

text: Lung


CBS 573.63

text: Spribille Lab

text: public

text: CBS 573.63

tag: Namespace:Spribille Lab

text: CBS 573.63

text: Sporothrix epigloea CBS 573.63 isolate

text: Sporothrix epigloea

text: Sporothrix epigloea

text: CBS 573.63

characteristic: strain

text: Sporothrix epigloea CBS 573.63


CBS 119000

text: Spribille Lab

text: public

text: CBS 119000

text: CBS 119000

text: Sporothrix epigloea CBS 119000 isolate

text: Sporothrix epigloea

text: Sporothrix epigloea

text: CBS 119000

text: Sporothrix epigloea CBS 119000


text: Spribille Lab

text: public

text: Annulohypoxylon species isolate SEMC78

text: Annulohypoxylon stygium

text: Annulohypoxylon stygium

text: Annulohypoxylon species SEMC78


text: Seoul National University

text: public

tag: Namespace:Seoul National University

characteristic: collection date

text: A sample derived from a patient diagnosed with TB and part of the study for the creation of the Pan-Lineage Reference Genome.

text: Japan

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 204)


characteristic: ENA first public

text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

characteristic: isolate

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 206)


characteristic: ENA-CHECKLIST

text: Seoul National University

text: public

characteristic: SRA accession

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 208)


text: Seoul National University

text: public

characteristic: Submitter Id

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 209)


text: Seoul National University

text: public

characteristic: description

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 211)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 212)


characteristic: External Id

text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 213)


text: Seoul National University

characteristic: INSDC center name

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 214)


text: Seoul National University

characteristic: INSDC last update

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 215)


text: Seoul National University

text: public

characteristic: INSDC status

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 216)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 217)

characteristic: title


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 218)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 219)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 223)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 225)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 226)


text: Seoul National University

text: public

text: A sample derived from a patient diagnosed with TB and part of the study for the creation of the Pan-Lineage Reference Genome.

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 227)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 228)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 230)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 231)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 233)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 234)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 235)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 236)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 238)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 239)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 240)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 242)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 243)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 244)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 245)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 247)


text: Seoul National University

text: public

text: A sample derived from a patient diagnosed with TB and part of the study for the creation of the Pan-Lineage Reference Genome.

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 248)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 249)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 251)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 252)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 253)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 254)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 256)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 258)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 260)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 261)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 262)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 264)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 265)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 266)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 267)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 270)


text: Seoul National University

text: public

text: A sample derived from a patient diagnosed with TB and part of the study for the creation of the Pan-Lineage Reference Genome.

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 271)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 272)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 273)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 274)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 275)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 276)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 277)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 278)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 279)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 280)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 281)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 283)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 284)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 287)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 288)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 289)


text: Seoul National University

text: public

text: A sample derived from a patient diagnosed with TB and part of the study for the creation of the Pan-Lineage Reference Genome.

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 291)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 292)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 293)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 294)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 296)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 297)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 298)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 300)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 302)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 303)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 304)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 305)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 306)


text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 307)


text: CVS Edinburgh

text: public

text: house mouse

characteristic: common name

text: mouse liver RNA

text: labelled

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: liver


text: CVS Edinburgh

text: public

characteristic: collection date

text: house mouse

text: mouse liver RNA

text: WT

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: B6; wild-type

text: liver


text: CVS Edinburgh

text: public

text: house mouse

text: mouse liver RNA

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: Mus musculus

text: liver


text: CVS Edinburgh

text: public

text: house mouse

text: mouse kidney RNA

text: labelled

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: kidney


text: CVS Edinburgh

text: public

text: house mouse

text: mouse kidney RNA

text: WT

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: B6; wild-type

text: kidney


text: CVS Edinburgh

text: public

text: house mouse

text: mouse kidney RNA

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: kidney


text: CVS Edinburgh

text: public

text: house mouse

text: mouse liver RNA

text: unlabelled

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: B6; wild-type

text: liver


text: CVS Edinburgh

text: public

text: house mouse

text: mouse liver RNA

text: unlabelled

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: liver


text: CVS Edinburgh

text: public

text: house mouse

text: mouse liver RNA

text: creneg

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: liver


text: CVS Edinburgh

text: public

text: house mouse

text: mouse liver RNA

text: creneg

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: B6; wild-type

text: liver


text: CVS Edinburgh

text: public

text: house mouse

text: mouse liver RNA

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: B6; wild-type

text: liver


text: CVS Edinburgh

text: public

text: house mouse

text: mouse kidney RNA

text: unlabelled

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: B6; wild-type

text: kidney


text: CVS Edinburgh

text: public

text: house mouse

text: mouse kidney RNA

text: unlabelled

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: kidney


text: CVS Edinburgh

text: public

text: house mouse

text: mouse kidney RNA

text: creneg

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: kidney


text: CVS Edinburgh

text: public

text: house mouse

text: mouse kidney RNA

text: creneg

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: B6; wild-type

text: kidney


text: CVS Edinburgh

text: public

text: house mouse

text: mouse kidney RNA

text: United Kingdom

text: Mus musculus

text: Mus musculus

text: B6; wild-type

text: kidney


text: Guilherme Henrique Gebim Polizel

text: public

text: cattle

text: male animal

text: Brazil

text: Bos taurus

text: Bos taurus

text: Liver


text: Division of Regulatory Genomics and Cancer Evolution, German Cancer Research Center

text: public

unit: week

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: house mouse

text: Protocols: Dissected spleen fragments were transferred to a 40-μm cell strainer (Greiner # 542040) and ground with a syringe plunger. The cell suspension was strained twice. Strainers were washed with additional DMEM (Gibco # 41966029) with 5% FBS and cells were pelleted by centrifugation at 300 x g for 4 minutes at 4°C. Cell pellets were carefully resuspended in 300 uL of ACK lysis buffer (Lonza # BP10-548E) for 1 minute in ice. After incubation cells were washed with 1mL of DMEM with 5% FBS and pelleted. DNA was crosslinked, fragmented, ligated, de-crosslinked and shuffled to get circular templates. Inverse PCR was performed using independent primer sets respectively targeting the 5’ end of the chrX duplication (forward TTCAGTAGGTGTGACAGAGA; reverse ACATAATTATAGCGCTGGCA), 3’ end of the chrX duplication (forward GCATCTGTCTGCTTACTTTG; reverse GGTCTGGATACCTTTCAAGG) and the chrY translocation site identified with the first two pairs (forward TAAAAGGGGAGGTAGACACA; reverse GTGTTCAAACCAGACTCCT). PCR products were purified, library prepped using the Nextera DNA Flex (Illumina) chemistry and pooled.

text: adult

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

characteristic: individual

text: not applicable

text: Mus musculus

text: Mus musculus

text: spleen

characteristic: organism part

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: WTM


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: house mouse

characteristic: description

text: adult

text: Four Core Genotypes XYM

text: not collected

text: not applicable

characteristic: isolate

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

text: Mus musculus

text: male

text: XYM


text: National Defence Medical collage

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

characteristic: collection date

text: Norway rat

characteristic: common name

text: Protocols: Normal sarine or isoproterenol was injected rats, and the rat heart was taken one hour after the injection. microRNA was extracted from the rat heart. miRNeasy mini kit was used according to manufacturer’s instruction. TruSeq Small RNA Library Prep kit was used according to manufacturer’s instruction.

text: adolescence

text: normal

characteristic: disease

text: non specific

text: not collected

text: ISO-10-03 rat

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

text: Isoproterenol

characteristic: stimulus

text: SD

characteristic: title


text: National Defence Medical collage

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: Norway rat

text: adolescence

characteristic: developmental stage

text: normal

text: non specific

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: ISO-10-04 rat

characteristic: individual

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

characteristic: organism part

text: Rattus norvegicus

text: male

text: Isoproterenol

text: SD


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: National Defence Medical collage

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: Norway rat

characteristic: description

text: adolescence

text: normal

text: non specific

text: not collected

text: ISO-10-05 rat

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

characteristic: sex

text: Isoproterenol

text: SD

characteristic: strain


text: National Defence Medical collage

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

characteristic: collection date

text: Norway rat

characteristic: common name

text: adolescence

text: normal

characteristic: disease

text: non specific

text: not collected

text: ISO-10-06 rat

text: not applicable

characteristic: isolate

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

text: Isoproterenol

text: SD


text: National Defence Medical collage

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: Norway rat

text: adolescence

characteristic: developmental stage

text: normal

text: non specific

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: ISO-10-07 rat

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

text: Isoproterenol

characteristic: stimulus

text: SD

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: National Defence Medical collage

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: Norway rat

characteristic: description

text: adolescence

text: normal

text: non specific

text: not collected

text: NS1 rat

characteristic: individual

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

characteristic: organism part

text: Rattus norvegicus

text: male

text: Normal Sarine

text: SD


text: National Defence Medical collage

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

characteristic: collection date

text: Norway rat

characteristic: common name

text: adolescence

text: normal

characteristic: disease

text: non specific

text: not collected

text: NS2 rat

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

characteristic: sex

text: Normal Sarine

text: SD

characteristic: strain


text: National Defence Medical collage

text: public

characteristic: age

text: ArrayExpress

characteristic: broker name

text: not collected

text: Norway rat

text: adolescence

characteristic: developmental stage

text: normal

text: non specific

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: NS5 rat

text: not applicable

characteristic: isolate

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

text: Normal Sarine

text: SD


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: National Defence Medical collage

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: Norway rat

characteristic: description

text: adolescence

text: normal

text: non specific

text: not collected

text: NS6 rat

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

text: Rattus norvegicus

text: male

text: Normal Sarine

characteristic: stimulus

text: SD

characteristic: title


text: National Defence Medical collage

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

characteristic: collection date

text: Norway rat

characteristic: common name

text: adolescence

text: normal

characteristic: disease

text: non specific

text: not collected

text: NS7 rat

characteristic: individual

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart

characteristic: organism part

text: Rattus norvegicus

text: male

text: Normal Sarine

text: SD


E-MTAB-14104:BL17500 1

text: Gurdon Institute, University of Cambridge

text: public

text: E-MTAB-14104:BL17500 1

text: ArrayExpress

characteristic: broker name

text: not collected

text: fruit fly

text: Protocols: In brief, groups of 50 testes for different genotypes were ground in 750 μl of TRIzol reagent and incubated at room temperature for 10 min.  Phenol was removed from samples by multiple rounds of chloroform extraction. RNA from the supernatant was precipitated by adding 0.5x isopropanol and washed once with 70% ethanol. The extracted RNA was then treated with RNase-free DNase I (New England Biolabs, M0303) for 30 min at 37°C to remove DNA followed by heat-inactivating DNase I by incubating 10 min at 65°C upon adding 1 μl of 50 mM EDTA.  Approximately 500 ng of total RNA was used for library prep. Following DNase I digestion, long RNA (>200 nt) was isolated using Zymo Clean and Concentrator columns (Zymo, R1019). Subsequently, rRNA was removed using the NEBNext mRNA Magnetic Isolation Module (New England Biolabs, E7490L). With the purified RNA, cDNA libraries were prepared by employing the NEBNext Ultra Directional RNA Library Prep Kit (New England Biolabs, E7760) and double-stranded cDNA was purified using AMPure XP Beads (Beckman Coulter, A63881).

text: y1 w67c23; P{EPgy2}Poldip2EY08866

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Drosophila melanogaster

text: Drosophila melanogaster

text: testis

text: Drosophila melanogaster

text: BL17500 1


E-MTAB-14104:BL17500 2

characteristic: ENA first public

text: public

text: E-MTAB-14104:BL17500 2

text: ArrayExpress

text: not collected

text: fruit fly

text: y1 w67c23; P{EPgy2}Poldip2EY08866

text: not collected

text: not applicable

characteristic: isolate

text: Drosophila melanogaster

characteristic: organism

text: Drosophila melanogaster

text: testis

text: Drosophila melanogaster

text: BL17500 2


E-MTAB-14104:C ctrl 1

characteristic: ENA-CHECKLIST

text: public

characteristic: SRA accession

text: E-MTAB-14104:C ctrl 1

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: fruit fly

text: wild type genotype

text: not collected

text: not applicable

text: Drosophila melanogaster

text: Drosophila melanogaster

text: testis

text: Drosophila melanogaster

text: C ctrl 1


E-MTAB-14104:C ctrl 2

text: public

text: E-MTAB-14104:C ctrl 2

text: ArrayExpress

text: not collected

text: fruit fly

characteristic: description

text: wild type genotype

text: not collected

text: not applicable

text: Drosophila melanogaster

text: Drosophila melanogaster

text: testis

text: Drosophila melanogaster

text: C ctrl 2

characteristic: title


text: OXFORDUNIV

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: age

text: ArrayExpress

text: not collected

text: Asian cultivated rice

text: Kitaake

characteristic: cultivar

text: Protocols: Mid leaf sections from five individual plants were combined. NA Plants were grown 16 hours of light @ 26-28 C and 8 hours dark @22C @300um PPFD.  NA NA Total RNA extraction from pooled rice leaves was performed using the QIAGEN RNeasy kit. Library preparation on isolated RNA samples was performed by Novogene.

text: leaf production stage

characteristic: developmental stage

text: not collected

text: not applicable

text: Oryza sativa

text: Oryza sativa

text: leaf component

text: Oryza sativa


text: OXFORDUNIV

text: public

text: ArrayExpress

text: not collected

characteristic: collection date

text: Asian cultivated rice

characteristic: common name

text: Kitaake

text: leaf production stage

text: WT

text: not collected

text: not applicable

text: Oryza sativa

text: Oryza sativa

text: leaf component

characteristic: organism part

text: Oryza sativa


text: University of Jaén

text: public

text: Industry

characteristic: broad-scale environmental context

text: Transcriptome of Enterococcus faecalis E9.8

text: Environmental surface of the wall

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Slaughterhouse

characteristic: local environmental context

text: Enterococcus faecalis

text: Transcriptomic profile of eugenol-adapted E. faecalis E9.8

characteristic: project name

text: Enterococcus faecalis


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: UANTW

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Belgium

text: Carrot Juice Fermentation

text: Lactiplantibacillus plantarum

characteristic: organism

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBF-0270


text: UANTW

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Portugal

text: phyllosphere

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBP-0214

characteristic: title


text: UANTW

text: public

characteristic: collection date

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-0098


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBF-0218


text: UANTW

text: public

text: Belgium

text: Vagina

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBV-1431


text: UANTW

text: public

text: Belgium

text: Strawberry Anthosphere

text: Leuconostoc citreum

text: Leuconostoc citreum

text: Leuconostoc citreum AMBP-0466


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-0661


text: UANTW

text: public

text: Belgium

text: Strawberry Anthosphere

text: Leuconostoc citreum

text: Leuconostoc citreum

text: Leuconostoc citreum AMBP-0460


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBF-0164


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBF-0207


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-0637


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-1176


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBF-0166


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-0030


text: UANTW

text: public

text: Belgium

text: Strawberry Anthosphere

text: Leuconostoc pseudomesenteroides

text: Leuconostoc pseudomesenteroides

text: Leuconostoc pseudomesenteroides AMBP-0458


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBF-0262


text: UANTW

text: public

text: Belgium

text: Strawberry Anthosphere

text: Leuconostoc citreum

text: Leuconostoc citreum

text: Leuconostoc citreum AMBP-0451


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Leuconostoc citreum

text: Leuconostoc citreum

text: Leuconostoc citreum AMBF-0231


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-1343


text: UANTW

text: public

text: Belgium

text: Vagina

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBV-1424


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBF-0205


text: UANTW

text: public

text: Belgium

text: phyllosphere

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBP-0424


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-1344


text: UANTW

text: public

text: Belgium

text: Vagina

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBV-1371


text: UANTW

text: public

text: Portugal

text: compost tea

text: Leuconostoc suionicum

text: Leuconostoc suionicum

text: Leuconostoc suionicum AMBP-0236


text: UANTW

text: public

text: Belgium

text: Compost tea

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBC-0001-G11


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBF-0252


text: UANTW

text: public

text: Portugal

text: Compost tea

text: Leuconostoc suionicum

text: Leuconostoc suionicum

text: Leuconostoc suionicum AMBP-0221


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBF-0114


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-1010


text: UANTW

text: public

text: Belgium

text: Vagina

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBV-1430


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Leuconostoc citreum

text: Leuconostoc citreum

text: Leuconostoc citreum AMBF-0233


text: UANTW

text: public

text: Belgium

text: Carrot Juice Fermentation

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBF-0234


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-1314


text: UANTW

text: public

text: Portugal

text: Compost tea

text: Leuconostoc suionicum

text: Leuconostoc suionicum

text: Leuconostoc suionicum AMBP-0220


text: UANTW

text: public

text: Belgium

text: Vagina

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum

text: Lactiplantibacillus plantarum AMBV-1009


text: UANTW

text: public

text: Belgium

text: Vagina

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides

text: Leuconostoc mesenteroides AMBV-1437


text: Statens Serum Institut

text: public

text: building

unit: m

characteristic: depth

text: wastewater

text: Denmark

text: wastewater treatment plant

text: Severe acute respiratory syndrome coronavirus 2

text: SARS-CoV-2 wastewater Illumina sequencing, Denmark

text: Illumina

characteristic: sequencing method


text: Institute of Vertberate Biology

text: public

text: human

characteristic: common name

characteristic: description

text: Czechia

text: Homo sapiens

text: Homo sapiens


text: Institute of Vertberate Biology

text: public

text: dog

text: Czechia

characteristic: geographic location (country and/or sea)

text: Canis lupus familiaris

text: Canis lupus familiaris


text: UZH

text: public

text: house mouse

text: Switzerland

text: Mus musculus

text: Mus musculus


text: HPC

text: public

text: ena-SAMPLE-TAB-08-06-2024-18:32:51:310-77385

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:693-71531

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71532

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71533

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71534

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71535

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71536

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71537

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71538

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71539

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71540

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71541

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71543

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:694-71544

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:695-71545

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:695-71546

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:695-71547

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:695-71548

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-07:31:34:695-71549

text: E.coli dead uv

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77436

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77437

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77438

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77439

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77440

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77441

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77442

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77443

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77444

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77445

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:238-77446

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77447

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77448

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77449

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77450

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77451

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77452

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77453

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77454

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77455

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77456

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77457

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77458

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77459

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77460

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77461

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77462

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77463

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77464

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77465

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77466

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77467

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77468

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77469

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: HPC

text: public

text: ena-SAMPLE-TAB-09-06-2024-08:46:41:239-77470

text: E.coli alive

text: Germany

text: Escherichia coli K-12

text: Escherichia coli K-12


text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: NOT PROVIDED

characteristic: barcoding center

text: aquatic biome

characteristic: broad-scale environmental context

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: collecting institution

text: adult annelid tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: California | Ventura County | Mugu Lagoon

characteristic: geographic location (region and locality)

text: salt marsh

characteristic: habitat

text: adult

characteristic: host life stage

text: Branchellion lobata

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: marine biome

text: annelid metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: annelid metagenome

text: e86d6440-b26e-410a-8fb4-38012c0db47f-asg-metagenome

characteristic: tolid


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15); bin3C (version 0.3.3); MaxBin (version 2.2.7); MetaTOR

characteristic: binning software

text: aquatic biome

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: collection date

characteristic: completeness score

text: checkM (version 1.2.2); checkM_DB (release 2015-01-16)

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult annelid tissue

text: USA

characteristic: geographic location (country and/or sea)

text: salt marsh

text: adult

text: Branchellion lobata

text: not collected

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

characteristic: investigation type

text: Annelid: Branchellion lobata

text: marine biome

characteristic: local environmental context

text: annelid metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Gammaproteobacteria bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.6)

characteristic: tRNA extraction software

text: GTDB-TK (version 2.4.0); GTDB (release 214)

characteristic: taxonomic classification

text: taxonomic classification defined by topology and ANI

characteristic: taxonomic identity marker

text: 2366ea80-1c32-43bc-b11b-d40805bb6133-asg-MAGScoT_cleanbin_000002

characteristic: title


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: collecting institution

characteristic: collection date

text: adult annelid tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: salt marsh

characteristic: habitat

text: adult

characteristic: host life stage

text: Branchellion lobata

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

text: Annelid: Branchellion lobata

text: marine biome

text: annelid metagenome

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Pacbio Sequel II

text: PROKKA (version 1.14.6)

text: 60ca992e-a94e-4e44-bc0e-4a64e85d55bf-asg-MAGScoT_cleanbin_000003

characteristic: tolid


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult annelid tissue

text: USA

characteristic: geographic location (country and/or sea)

text: salt marsh

text: adult

text: Branchellion lobata

text: not collected

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

characteristic: investigation type

text: Annelid: Branchellion lobata

text: marine biome

characteristic: local environmental context

text: annelid metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.6)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 5f02b0da-25a6-4e34-ad6c-46ba8e262337-asg-MAGScoT_cleanbin_000004

characteristic: title


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: collecting institution

characteristic: collection date

text: adult annelid tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: salt marsh

characteristic: habitat

text: adult

characteristic: host life stage

text: Branchellion lobata

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

text: Annelid: Branchellion lobata

text: marine biome

text: annelid metagenome

text: uncultured Burkholderiales bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: uncultured Burkholderiales bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.6)

text: taxonomic classification fully defined by topology

text: 2d515ceb-2a66-4041-b9bd-6ca6441c059f-asg-MAGScoT_cleanbin_000005

characteristic: tolid


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult annelid tissue

text: USA

characteristic: geographic location (country and/or sea)

text: salt marsh

text: adult

text: Branchellion lobata

text: not collected

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

characteristic: investigation type

text: Annelid: Branchellion lobata

text: marine biome

characteristic: local environmental context

text: annelid metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Burkholderiales bacterium

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: uncultured Burkholderiales bacterium

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.6)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 10cf0522-3ff2-4447-b35b-bb989bc573a4-asg-MAGScoT_cleanbin_000006

characteristic: title


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: collecting institution

characteristic: collection date

text: adult annelid tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: salt marsh

characteristic: habitat

text: adult

characteristic: host life stage

text: Branchellion lobata

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

text: Annelid: Branchellion lobata

text: marine biome

text: annelid metagenome

text: Aureibaculum sp.

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Aureibaculum sp.

text: Pacbio Sequel II

text: PROKKA (version 1.14.6)

text: f9bac44d-54dd-40a2-b335-ae202841e6d1-asg-MAGScoT_cleanbin_000009

characteristic: tolid


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: aquatic biome

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult annelid tissue

text: USA

characteristic: geographic location (country and/or sea)

text: salt marsh

text: adult

text: Branchellion lobata

text: not collected

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

characteristic: investigation type

text: Annelid: Branchellion lobata

text: marine biome

characteristic: local environmental context

text: annelid metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: Mesoflavibacter zeaxanthinifaciens

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: Mesoflavibacter zeaxanthinifaciens

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.6)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: a3e7e20c-410b-40a6-ad1a-6040d48e250e-asg-MAGScoT_cleanbin_000010

characteristic: title

text: wcBraLoba9.Mesoflavibacter_zeaxanthinifaciens_1


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

text: Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: collecting institution

characteristic: collection date

text: adult annelid tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: California | Ventura County | Mugu Lagoon

characteristic: geographic location (region and locality)

text: salt marsh

characteristic: habitat

text: adult

characteristic: host life stage

text: Branchellion lobata

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

text: Annelid: Branchellion lobata

text: marine biome

text: annelid metagenome

text: Vibrio sinaloensis

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: Vibrio sinaloensis

text: Pacbio Sequel II

text: PROKKA (version 1.14.6)

text: 794c908b-fcca-4021-a1a8-da5eb3c32e88-asg-MAGScoT_cleanbin_000001

characteristic: tolid


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

text: MAGScoT (version 1.0.0); MetaBat (version 2.15); bin3C (version 0.3.3); MaxBin (version 2.2.7); MetaTOR

text: aquatic biome

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: completeness score

characteristic: completeness software

characteristic: contamination score

characteristic: depth

text: adult annelid tissue

text: USA

characteristic: geographic location (country and/or sea)

text: salt marsh

text: adult

text: Branchellion lobata

text: not collected

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

characteristic: investigation type

text: Annelid: Branchellion lobata

text: marine biome

characteristic: local environmental context

text: annelid metagenome

characteristic: metagenomic source

characteristic: number of standard tRNAs extracted

text: uncultured Mesonia sp.

characteristic: organism

text: WHOLE ORGANISM

text: ASG

characteristic: project name

text: uncultured Mesonia sp.

text: Pacbio Sequel II

characteristic: sequencing method

text: PROKKA (version 1.14.6)

characteristic: tRNA extraction software

characteristic: taxonomic classification

characteristic: taxonomic identity marker

text: 27f41666-8290-4d0e-87ab-1dca81c034a3-asg-MAGScoT_cleanbin_000007

characteristic: title


text: PROKKA (version 1.14.6)

characteristic: 16S recovery software

text: Yes

characteristic: 16s recovered

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Queen Mary University of London

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Minimap2 (version 2.24-r1122)

characteristic: MAG coverage software

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: Hifiasm (version 0.19.8)

characteristic: assembly software

text: NOT PROVIDED

characteristic: barcoding center

text: coverage; graph; hic-mapping

characteristic: binning parameters

characteristic: binning software

text: aquatic biome

characteristic: broad-scale environmental context

text: RALPH APPY

text: PORT OF LOS ANGELES

characteristic: collecting institution

characteristic: collection date

text: checkM (version 1.2.2); checkM_DB (release 2015-01-16)

text: adult annelid tissue

characteristic: environmental medium

text: USA

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: salt marsh

characteristic: habitat

text: adult

characteristic: host life stage

text: Branchellion lobata

characteristic: host scientific name

text: not collected

characteristic: host sex

characteristic: host taxid

text: SHANA GOFFREDI

text: OCCIDENTAL COLLEGE

text: metagenome-assembled genome

text: Annelid: Branchellion lobata

text: marine biome

text: annelid metagenome

text: uncultured Rhizobiaceae bacterium

text: WHOLE ORGANISM

characteristic: organism part

text: ASG

characteristic: sample derived from

text: uncultured Rhizobiaceae bacterium

text: Pacbio Sequel II

text: PROKKA (version 1.14.6)

text: 1654a0c5-b25b-43f6-868d-d8aff391589a-asg-MAGScoT_cleanbin_000008

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Statens Serum Institut

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: building

characteristic: depth

text: wastewater

text: Denmark

characteristic: geographic location (country and/or sea)

text: wastewater treatment plant

characteristic: local environmental context

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: SARS-CoV-2 wastewater Illumina sequencing, Denmark

characteristic: project name

text: Illumina

characteristic: sequencing method

characteristic: title


text: Genoscope

characteristic: GAL

text: not provided

text: EarlhamInstitute

text: public

text: NHMC 42.13475

text: NOT APPLICABLE

text: COPO

characteristic: broker name

text: Eleftheria Antaloudaki

text: NATURAL HISTORY MUSEUM of CRETE

characteristic: collecting institution

characteristic: collection date

characteristic: collector ORCID ID

text: Greece

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Crete | Heraklion | NHMC white buildings Knossou garden

characteristic: geographic location (region and locality)

text: Steep limestones over the sea

characteristic: habitat

text: Eleftheria Antaloudaki

text: NATURAL HISTORY MUSEUM of CRETE

text: vegetative structure

characteristic: lifestage

text: Carlina diae

text: LEAF

text: Greece | Crete | Heraklion | Dia Island

characteristic: original geographic location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ERGA

text: NOT PROVIDED

characteristic: proxy biomaterial

text: NOT APPLICABLE

characteristic: proxy voucher

text: hand picking

characteristic: sample collection method

text: DANAE KARAKASI

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

text: NATURAL HISTORY MUSEUM of CRETE

characteristic: sample coordinator affiliation

text: Carlina diae

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: ERGA EA 6287 65

text: NHMC 42.13475

text: 53c17614-4d1a-4acb-be47-10b037b59be1-erga


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Genoscope

characteristic: GAL

text: not provided

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NHMC 42.13475

text: NOT APPLICABLE

text: COPO

characteristic: broker name

text: Eleftheria Antaloudaki

text: NATURAL HISTORY MUSEUM of CRETE

characteristic: collecting institution

characteristic: collection date

text: Greece

characteristic: geographic location (country and/or sea)

text: Steep limestones over the sea

text: Eleftheria Antaloudaki

text: NATURAL HISTORY MUSEUM of CRETE

text: vegetative structure

text: Carlina diae

characteristic: organism

text: LEAF

characteristic: organism part

text: Greece | Crete | Heraklion | Dia Island

text: ERGA

characteristic: project name

text: NOT PROVIDED

text: NOT APPLICABLE

text: hand picking

text: DANAE KARAKASI

text: NATURAL HISTORY MUSEUM of CRETE

characteristic: sample derived from

text: Carlina diae

text: HERMAPHRODITE MONOECIOUS

text: ERGA EA 6287 65

text: NHMC 42.13475

text: e031d6e2-f25a-4ed6-bd9b-e8f52385d820-erga

characteristic: title

characteristic: tolid


characteristic: ENA first public

text: Genoscope

text: not provided

text: EarlhamInstitute

text: public

text: NHMC 42.13475

text: NOT APPLICABLE

text: COPO

text: Eleftheria Antaloudaki

text: NATURAL HISTORY MUSEUM of CRETE

characteristic: collector ORCID ID

text: Greece

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Steep limestones over the sea

characteristic: habitat

text: Eleftheria Antaloudaki

text: NATURAL HISTORY MUSEUM of CRETE

text: vegetative structure

characteristic: lifestage

text: Carlina diae

text: LEAF

text: Greece | Crete | Heraklion | Dia Island

characteristic: original geographic location

characteristic: original geographic location (latitude)

characteristic: original geographic location (longitude)

text: ERGA

text: NOT PROVIDED

characteristic: proxy biomaterial

text: NOT APPLICABLE

characteristic: proxy voucher

text: hand picking

characteristic: sample collection method

text: DANAE KARAKASI

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

text: NATURAL HISTORY MUSEUM of CRETE

characteristic: sample coordinator affiliation

text: Carlina diae

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: ERGA EA 6287 65

text: NHMC 42.13475

text: d8a300c3-c494-4631-a921-f1a4fcf2294f-erga


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Genoscope

characteristic: GAL

text: not provided

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NHMC 42.13475

text: NOT APPLICABLE

text: COPO

characteristic: broker name

text: Eleftheria Antaloudaki

text: NATURAL HISTORY MUSEUM of CRETE

characteristic: collecting institution

characteristic: collection date

text: Greece

characteristic: geographic location (country and/or sea)

text: Steep limestones over the sea

text: Eleftheria Antaloudaki

text: NATURAL HISTORY MUSEUM of CRETE

text: vegetative structure

text: Carlina diae

characteristic: organism

text: LEAF

characteristic: organism part

text: Greece | Crete | Heraklion | Dia Island

text: ERGA

characteristic: project name

text: NOT PROVIDED

text: NOT APPLICABLE

text: hand picking

text: DANAE KARAKASI

text: NATURAL HISTORY MUSEUM of CRETE

characteristic: sample derived from

text: Carlina diae

text: HERMAPHRODITE MONOECIOUS

text: ERGA EA 6287 65

text: NHMC 42.13475

text: 9c81839d-b726-4ca8-9f03-a7ca7c7ceb42-erga

characteristic: title

characteristic: tolid


characteristic: ENA first public

text: DTU-GE

text: public

text: DTU_2023_1016970_1_MG_RA_CPH_Sewage_1029

text: DTU-GE

characteristic: description

text: Sewage

characteristic: environmental medium

text: Denmark

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: wastewater metagenome

text: NextSeq 500

text: wastewater metagenome


characteristic: ENA-CHECKLIST

text: DTU-GE

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DTU_2023_1016975_1_MG_RA_CPH_Sewage_1040

text: DTU-GE

text: Sewage

text: Denmark

text: wastewater metagenome

text: NextSeq 500

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU_2023_1016972_1_MG_RA_CPH_Sewage_1049

characteristic: Submitter Id

text: DTU-GE

characteristic: broker name

characteristic: collection date

text: Sewage

text: Denmark

text: wastewater metagenome

text: NextSeq 500

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU_2023_1016978_1_MG_RA_CPH_Sewage_1052

text: DTU-GE

text: Sewage

text: Denmark

characteristic: geographic location (country and/or sea)

text: wastewater metagenome

characteristic: organism

text: NextSeq 500

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU_2023_1016979_1_MG_RA_CPH_Sewage_1053

text: DTU-GE

text: Sewage

text: Denmark

text: wastewater metagenome

text: NextSeq 500

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU_2023_1016980_1_MG_RA_CPH_Sewage_1054

text: DTU-GE

text: Sewage

text: Denmark

text: wastewater metagenome

text: NextSeq 500

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU-GE

text: Sewage

text: Denmark

text: wastewater metagenome

text: NextSeq 500

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU_2023_1026166_1_MG_DK_AV_Vallensbaek_1085

text: DTU-GE

text: Sewage

text: Denmark

text: wastewater metagenome

text: NextSeq 500

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU_2023_1026167_1_MG_DK_AV_Gildhoej_1086

text: DTU-GE

text: Sewage

text: Denmark

text: wastewater metagenome

text: NextSeq 500

text: wastewater metagenome


text: DTU-GE

text: public

text: DTU-GE

text: Sewage

text: Denmark

text: wastewater metagenome

text: GridION

text: wastewater metagenome


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: Carezza Botto

text: Universidad de Chile

characteristic: collecting institution

text: Chile

text: Región Metropolitana | Maipo | Calera de Tango | Fundo la Batalla

characteristic: geographic location (region and locality)

text: Household

characteristic: habitat

text: Carezza Botto

text: Universidad de Chile

text: adult

characteristic: lifestage

text: Triatoma infestans

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Triatoma infestans

text: MALE

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: Carezza Botto

text: Universidad de Chile

text: Chile

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Household

text: Carezza Botto

text: Universidad de Chile

text: adult

text: Triatoma infestans

text: WHOLE ORGANISM

text: ToL

text: Triatoma infestans

text: FEMALE

text: NOT PROVIDED

text: N

characteristic: title

characteristic: tolid


text: Sanger Institute

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Carezza Botto

text: Universidad de Chile

characteristic: collection date

text: Chile

characteristic: geographic location (country and/or sea)

text: Household

text: Carezza Botto

text: Universidad de Chile

text: adult

text: Triatoma infestans

characteristic: organism

text: HEAD

characteristic: sample derived from

text: Triatoma infestans

text: MALE

text: NOT PROVIDED

text: N


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

text: Carezza Botto

text: Universidad de Chile

characteristic: collecting institution

text: Chile

characteristic: geographic location (region and locality)

text: Household

characteristic: habitat

text: Carezza Botto

text: Universidad de Chile

text: adult

characteristic: lifestage

text: Triatoma infestans

text: THORAX

characteristic: organism part

characteristic: project name

text: Triatoma infestans

text: MALE

text: NOT PROVIDED

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: Carezza Botto

text: Universidad de Chile

text: Chile

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Household

text: Carezza Botto

text: Universidad de Chile

text: adult

text: Triatoma infestans

text: LEG

text: Triatoma infestans

text: MALE

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont


text: Sanger Institute

text: Tree of Life Programme

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Carezza Botto

text: Universidad de Chile

characteristic: collection date

text: Chile

characteristic: geographic location (country and/or sea)

text: Household

text: Carezza Botto

text: Universidad de Chile

text: adult

text: Triatoma infestans

text: HEAD

text: Triatoma infestans

text: FEMALE

text: NOT PROVIDED

text: N

characteristic: title

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

text: Carezza Botto

text: Universidad de Chile

characteristic: collecting institution

text: Chile

characteristic: geographic location (region and locality)

text: Household

characteristic: habitat

text: Carezza Botto

text: Universidad de Chile

text: adult

characteristic: lifestage

text: Triatoma infestans

characteristic: organism

text: THORAX

characteristic: sample derived from

text: Triatoma infestans

text: FEMALE

text: NOT PROVIDED

text: N


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

text: public

text: Carezza Botto

text: Universidad de Chile

text: Chile

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Household

text: Carezza Botto

text: Universidad de Chile

text: adult

text: Triatoma infestans

text: LEG

characteristic: organism part

characteristic: project name

text: Triatoma infestans

text: FEMALE

text: NOT PROVIDED

text: N


text: Anthony Smith, NICD

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: EnteroBase

characteristic: broker name

text: EnteroBase

text: A. Smith, National Institute for Communicable Diseases

characteristic: collection date

text: Whole genome sequencing data uploaded by EnteroBase user

characteristic: description

text: South Africa

characteristic: geographic location (country and/or sea)

text: Gauteng

text: Human, Stool

text: Salmonella enterica

text: Salmonella enterica

text: Muenchen

characteristic: serovar

characteristic: strain


text: Anthony Smith, NICD

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Gauteng

characteristic: geographic location (region and locality)

text: Human, Stool

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

text: Typhimurium

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Anthony Smith, NICD

characteristic: INSDC center name

text: public

text: EnteroBase

text: EnteroBase

text: South Africa

text: Gauteng

text: Human, Blood culture

text: Salmonella enterica

text: Salmonella enterica

text: Typhimurium