text: killed

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: human

text: Nascent RNA

text: Homo sapiens

text: anti-m6A (rabbit polyclonal from Synaptic Systems)

text: Synaptic Systems

text: before BrU-IP

text: Homo sapiens

text: m6A-IP from 15min BrU-labeled nascent RNA


status: PUBLIC

characteristic: External Id

text: NIAID Integrated Research Facility

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Centers for Disease Control and Prevention

tag: attribute

characteristic: collected by

characteristic: collection date

text: The starting material for Marburg Angola virus (full designation: Marburg virus/H.sapiens-tc/AGO/2005/Ang-1379v) was obtained from Dr. Thomas Ksiazek (University of Texas Medical Branch at Galveston, Galveston, TX, USA). VERO C1008 (E6) cells, Kidney (African green monkey), Working Cell Bank, NR-596 were obtained through BEI Resources (National Institute of Allergy and Infectious diseases [NIAID], National Institutes of Health [NIH], Manassas, VA). The IRF0169_MARV Master stock was propagated using Minimum Essential Medium-alpha, GlutaMAX, no nucleosides (Gibco, ThermoFisher Scientific) supplemented with 2% US-origin, certified, heat-inactivated fetal bovine serum (HI-FBS, Gibco, ThermoFisher Scientific). Following harvest, HI-FBS was QS'd to 10% final concentration prior to cryopreservation.

characteristic: description

text: TrizolLS

characteristic: extraction method

text: Angola

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: 8 Mo

characteristic: host age

text: Marburg Virus Disease

characteristic: host disease

text: female

characteristic: host sex

characteristic: host subject id

text: Fatal case

characteristic: isolate

text: serum

characteristic: isolation source

text: Vero C1008 (E6) cells

characteristic: lab-host

text: VERO C1008 (E6) cells

characteristic: laboratory host

text: Orthomarburgvirus marburgense

characteristic: organism

text: harvest date: 12-Jun-2015; passaged 3x in cell culture

text: 05-Jun-2015 to 12-Jun-2015

characteristic: passage date

text: Integrated Research Facility (Cai, Yingyun; Sword, Jennifer M.; Honko, Anna N.)

characteristic: stock production

text: Marburg virus Angola (p3 tissue culture Master Stock, UTMB stock)

characteristic: title


characteristic: External Id

text: NIAID Integrated Research Facility

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collected by

characteristic: collection date

text: This Master stock was propagated from founder material orginally at USAMRIID [label read: E6 p3 3/24/05, Fr: NIVp2, 7-03-03, 1:10 (assume SPB19901924)]. VERO C1008 (E6) cells, Kidney (African green monkey), Working Cell Bank, NR-596 were obtained through BEI Resources (National Institute of Allergy and Infectious diseases [NIAID], National Institutes of Health [NIH], Manassas, VA). Virus stock was propagated using Minimum Essential Medium-alpha, GlutaMAX, no nucleosides (Gibco, ThermoFisher Scientific) supplemented with 2% US-origin, certified, heat-inactivated fetal bovine serum (HI-FBS, Gibco, ThermoFisher Scientific). Following harvest, HI-FBS was QS'd to 10% final concentration prior to cryopreservation.

text: TrizolLS

text: Malaysia: Kuala Lumpur

text: Homo sapiens

text: NiV disease

text: male

text: Fatal case

text: Vero C1008 (E6) cells

text: VERO C1008 (E6) cells

text: Henipavirus nipahense

text: harvest date: 23-Mar-2015; passaged 4x in cell culture

text: 20-Mar-2015 to 23-Mar-2015

text: Vero76+1, VeroE6+3

text: Integrated Research Facility (Honko, Anna N.; Sword, Jennifer M.)

text: Nipah virus Malaysia (p4 tissue culture Master Stock, USAMRIID stock)


text: NIAID Integrated Research Facility

text: live

text: Pathogen.cl

text: This Master stock was propagated from founder material orginally produced at USAMRIID. VERO C1008 (E6) cells, Kidney (African green monkey), Working Cell Bank, NR-596 were obtained through BEI Resources (National Institute of Allergy and Infectious diseases [NIAID], National Institutes of Health [NIH], Manassas, VA). Virus stock was propagated using Minimum Essential Medium-alpha, GlutaMAX, no nucleosides (Gibco, ThermoFisher Scientific) supplemented with 2% US-origin, certified, heat-inactivated fetal bovine serum (HI-FBS, Gibco, ThermoFisher Scientific). Following harvest, HI-FBS was QS'd to 10% final concentration prior to cryopreservation.

characteristic: description

text: TrizolLS

characteristic: extraction method

text: Australia: Hendra

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: HeV disease

characteristic: host disease

characteristic: isolate

text: Vero C1008 (E6) cells

text: VERO C1008 (E6) cells

text: Henipavirus hendraense

text: harvest date: 14-May-2015 passaged 6x in cell culture

text: 11-May-2015 to 14-May-2015

text: CRFK+4, Vero76+1, VeroE6+1

text: Hendra virus (p tissue culture Master Stock, USAMRIID stock)


text: NIAID Integrated Research Facility

text: live

text: Pathogen.cl

text: This stock was propagated from the Master stock (BioSample SAMN05860095, IRF0158_NiV) in VERO C1008 (E6) cells, Kidney (African green monkey), Working Cell Bank, NR-596 obtained through BEI Resources (National Institute of Allergy and Infectious diseases [NIAID], National Institutes of Health [NIH], Manassas, VA). Virus stock was propagated using Minimum Essential Medium-alpha, GlutaMAX, no nucleosides (Gibco, ThermoFisher Scientific) supplemented with 2% US-origin, certified, heat-inactivated fetal bovine serum (HI-FBS, Gibco, ThermoFisher Scientific). Following harvest, HI-FBS was QS'd to 10% final concentration prior to cryopreservation.

text: TrizolLS

text: Malaysia: Kuala Lumpur

text: Homo sapiens

text: NiV disease

text: male

characteristic: host sex

text: Fatal case

text: Vero C1008 (E6) cells

characteristic: lab-host

text: VERO C1008 (E6) cells

characteristic: laboratory host

text: Henipavirus nipahense

characteristic: organism

text: harvest date: 14-Apr-2015; passaged 5x in cell culture (parent stock: SAMN05860095)

text: 11-Apr-2015 to 14-Apr-2015

characteristic: passage date

text: Vero76+1, VeroE6+4

text: Integrated Research Facility (Johnson, Joshua C.; Jennifer M.; Honko, Anna N.)

characteristic: stock production

text: Nipah virus Malaysia (p5 tissue culture Working Stock, USAMRIID stock)

characteristic: title


Roseomonas sp.

characteristic: External Id

text: Kyonggi University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Kuwait

text: hydrocarbon contaminated soil

characteristic: isolation source

text: Pseudoroseomonas deserti

text: Pure culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Roseomonas deserti

text: type strain of Roseomonas deserti

characteristic: type material


text: NIAID Integrated Research Facility

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Centers for Disease Control

characteristic: collected by

characteristic: collection date

text: This stock was propagated from the Master stock (BioSample SAMN05859702, IRF0169_MARV) in VERO C1008 (E6) cells, Kidney (African green monkey), Working Cell Bank, NR-596 were obtained through BEI Resources (National Institute of Allergy and Infectious diseases [NIAID], National Institutes of Health [NIH], Manassas, VA). The IRF0202_MARV working stock was propagated using Minimum Essential Medium-alpha, GlutaMAX, no nucleosides (Gibco, ThermoFisher Scientific) supplemented with 2% US-origin, certified, heat-inactivated fetal bovine serum (HI-FBS, Gibco, ThermoFisher Scientific). Following harvest, HI-FBS was QS'd to 10% final concentration prior to cryopreservation.

characteristic: description

text: TrizolLS

characteristic: extraction method

text: Angola

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: 8 Mo

characteristic: host age

text: Marburg Virus Disease

characteristic: host disease

text: female

characteristic: host sex

characteristic: host subject id

text: Fatal case

text: Marburg virus/H.sapiens-tc/AGO/2005/Ang-1379v

characteristic: isolate

text: serum

text: VERO C1008 (E6) cells

text: Orthomarburgvirus marburgense

text: 04-Dec-2015 to 09-Dec-2015

text: Marburg virus Angola (p4 tissue culture Working Stock, UTMB stock)


Tchoupitoulas culture

characteristic: External Id

text: Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Dr Graham Lloyd

characteristic: culture collection

text: USA

text: Rattus norvegicus

text: Pancreas

text: NCPV viral culture

text: Rattus norvegicus pancreas

text: Vero E6

characteristic: lab host

text: Orthohantavirus seoulense

characteristic: organism

text: Tchoupitoulas 579-8

text: Viral sample from Seoul orthohantavirus

characteristic: title


Tula culture

text: Public Health England

text: live

text: Viral

characteristic: SRA accession

text: R Elliott, Univesity of Glasgow

characteristic: collected by

text: NCPV: 0504102v

text: Czech Republic

characteristic: geo loc name

text: NCPV viral culture

text: Vero E6

text: Orthohantavirus tulaense

text: Viral sample from Tula orthohantavirus


Puumala culture #851

text: Public Health England

text: live

text: Viral

text: Dr G van der Groen, Institute of Tropical Medicine

text: Russia

text: NCPV viral culture

text: Orthohantavirus puumalaense

characteristic: strain

text: Viral sample from Puumala orthohantavirus


Acremonium chrysogenum delta-veA

text: Ruhr-Universitaet Bochum

text: live

text: Microbe, viral or environmental

text: Department of General and Molecular Botany; Ruhr-University Bochum; Universitaetsstr. 150, 44801 Bochum, Germany

characteristic: biomaterial provider

text: laboratory strain

characteristic: isolation source

text: Hapsidospora chrysogena

text: whole organism

characteristic: sample type

text: delta-veA

text: Microbe sample from Acremonium chrysogenum


Acremonium chrysogenum A3/2

characteristic: External Id

text: Ruhr-Universitaet Bochum

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: laboratory strain

text: Hapsidospora chrysogena

text: whole organism


Acremonium chrysogenum ATCC 11550

text: Ruhr-Universitaet Bochum

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: laboratory strain

text: Hapsidospora chrysogena

text: whole organism

text: ATCC 11550


text: Universidade Federal do Parana (UFPR)

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Brazil: Lavras

text: Vigna unguiculata

characteristic: host

text: root nodules

text: Bradyrhizobium brasilense

text: cell culture

text: UFLA 03-321

text: Microbe sample from Bradyrhizobium sp. UFLA 03-321


Acidovorax citrulli 7A1

text: Hebrew University of Jerusalem

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

characteristic: env biome

characteristic: env feature

text: Israel

text: Citrullus lanatus

text: 31.0461 N 34.8516 E

characteristic: lat lon

text: Paracidovorax citrulli

characteristic: organism

text: MIGS Cultured Bacterial/Archaeal sample from Acidovorax citrulli

characteristic: title


Rouxiella sp. ERMR1:05

characteristic: External Id

text: CSIR-Institute of Himalayan Bioresource Technology

text: live

text: Microbe, viral or environmental

text: 4600 m

characteristic: altitude

text: Rakshak Kumar

characteristic: biomaterial provider

text: Rakshak Kumar

characteristic: collected by

characteristic: culture collection

text: 15 cm

characteristic: depth

text: Pure isolate of bacteria surviving at harsh environment of high altitude

text: Himachal Pradesh

text: India: West Sikkim, East Rathong Glacier

characteristic: geo loc name

text: Rakshak Kumar

characteristic: identified by

text: soil

characteristic: isolation source

text: 27.34 N 88.05999999 E

text: Rahnella sikkimica

text: 500 gm

text: bacteria

characteristic: sample type

characteristic: strain

text: 10 Degree Celcius

characteristic: temp

text: Rouxiella sp. ERMR1:05: Environmental isolate from Sikkim Himalaya


status: KILLED

text: MIMARKS.specimen

characteristic: BioSampleModel

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|shenjean

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: killed

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: sea coast

text: sea grass bed

text: marine sediment

text: USA: Sammy Creek Landing, Upper Sugarloaf Key, FL

text: Ctena orbiculata

characteristic: host

text: Gill

text: not applicable

characteristic: isolate

text: 24.64756 N 81.40721 W

text: uncultured bacterium

text: uncultured bacterium


characteristic: External Id

text: killed

characteristic: activation time

text: NCBI

text: activated B cell

characteristic: cell type

text: house mouse

characteristic: common name

text: WT

characteristic: genotype/variation

text: Mus musculus

characteristic: organism

text: Mus musculus

text: spleen

characteristic: tissue

characteristic: title


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: killed

text: activated, 30h, HU

text: NCBI

text: activated B cell

text: house mouse

text: WT

text: Mus musculus

text: Mus musculus

text: spleen


characteristic: INSDC first public

characteristic: INSDC last update

text: killed

text: activated, 24h

text: NCBI

text: activated B cell

text: house mouse

text: WT

text: Mus musculus

text: Mus musculus

text: spleen


text: killed

characteristic: INSDC status

characteristic: SRA accession

text: Embryonic day 13.5

characteristic: age

text: NCBI

text: house mouse

characteristic: genotype

text: Mus musculus

text: Mus musculus

text: forelimb

text: forelimb

text: Forelimb Smad4-KO E13.5


text: killed

characteristic: Submitter Id

text: Embryonic day 12.5

text: NCBI

characteristic: broker name

text: house mouse

text: Mus musculus

text: Mus musculus

text: forelimb

text: forelimb

text: Forelimb Smad4-KO E12.5


characteristic: External Id

text: killed

text: Embryonic day 13.5

text: NCBI

text: house mouse

text: wild type

text: Mus musculus

text: Mus musculus

text: forelimb

text: forelimb

text: Forelimb WT E13.5


text: killed

text: Embryonic day 12.5

text: NCBI

text: house mouse

text: wild type

text: Mus musculus

text: Mus musculus

text: forelimb

text: forelimb

text: Forelimb WT E12.5


text: killed

text: Embryonic day 12.5&13.5

text: NCBI

characteristic: chip antibody

text: house mouse

text: Mus musculus

text: Mus musculus

text: forelimb

characteristic: strain

text: forelimb

text: Forelimb input DNA


text: killed

text: Embryonic day 12.5&13.5

text: NCBI

text: Smad4 antibody (04-1033, Millipore)

text: house mouse

characteristic: common name

text: Mus musculus

text: Mus musculus

text: forelimb

text: forelimb

text: Forelimb Smad4 ChIPSeq


text: Plant

characteristic: BioSampleModel

characteristic: INSDC center name

text: killed

text: Biological replicate 1

characteristic: Replicates

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Leaf adaxial cells

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

characteristic: ecotype

text: China: Beijing

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: Shoot


text: Plant

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

text: killed

text: Biological replicate 2

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Leaf adaxial cells

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot

characteristic: tissue


text: Plant

characteristic: INSDC last update

text: killed

characteristic: INSDC status

text: Biological replicate 3

characteristic: SRA accession

text: 7 DAG

characteristic: age

text: Yuling jiao

text: NCBI

text: Leaf adaxial cells

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

characteristic: External Id

text: killed

text: Biological replicate 1

characteristic: Submitter Id

text: 7 DAG

text: Yuling jiao

text: NCBI

characteristic: broker name

text: Epidermal cells

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 2

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Epidermal cells

text: thale cress

characteristic: common name

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

characteristic: BioSampleModel

text: killed

text: Biological replicate 3

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Epidermal cells

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

characteristic: INSDC center name

text: killed

text: Biological replicate 1

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Central zone

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 2

characteristic: Replicates

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Central zone

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 3

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Central zone

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

characteristic: ecotype

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 1

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Leaf abaxial cells

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

text: Shoot


text: Plant

characteristic: ENA-FIRST-PUBLIC

text: killed

text: Biological replicate 2

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Leaf abaxial cells

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

characteristic: ENA-LAST-UPDATE

text: killed

text: Biological replicate 3

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Leaf abaxial cells

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

characteristic: INSDC first public

text: killed

text: Biological replicate 1

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Leaf margin

text: thale cress

text: 7 DAG seedling

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 2

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Leaf margin

text: thale cress

text: 7 DAG seedling

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot

characteristic: tissue


text: Plant

characteristic: INSDC last update

text: killed

text: Biological replicate 3

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Leaf margin

text: thale cress

text: 7 DAG seedling

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

characteristic: INSDC status

text: Biological replicate 1

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Peripheral zone

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 2

characteristic: SRA accession

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Peripheral zone

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 3

text: 7 DAG

characteristic: age

text: Yuling jiao

text: NCBI

text: Peripheral zone

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

characteristic: External Id

text: killed

text: Biological replicate 1

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Organization center

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 2

characteristic: Submitter Id

text: 7 DAG

text: Yuling jiao

text: NCBI

text: Organization center

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Plant

text: killed

text: Biological replicate 3

text: 7 DAG

text: Yuling jiao

text: NCBI

characteristic: broker name

text: Organization center

text: thale cress

text: 7 DAG seedling

text: Landsberg erecta

text: China: Beijing

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Shoot


text: Institute of Bioengineering, Research Center of Biotechnology of RAS

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Karnachuk Olga

text: missing

text: missing

text: animal

characteristic: host

text: gut

text: Clostridium thermosuccinogenes

text: missing

characteristic: strain

text: Microbe sample from Clostridium thermosuccinogenes

characteristic: title