status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

text: IMPERIAL COLLEGE LONDON

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:IMPERIAL COLLEGE LONDON

characteristic: Submitter Id

text: Candida auris from KCL

characteristic: description

text: [Candida] auris

characteristic: organism

text: [Candida] auris

characteristic: title


text: public

tag: Namespace:Oxford University Clinical Research Unit, Wellcome Africa Asia Programme, Vietnam

characteristic: collection date

text: feces

text: fecal environment

characteristic: environment (biome)

text: Animal distal gut

characteristic: environment (feature)

text: fecal material

characteristic: environment (material)

text: Viet Nam

characteristic: geographic location (country and/or sea)

text: not provided

unit: DD

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: human-gut

characteristic: human gut environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

characteristic: project name

text: human gut metagenome

text: Illumina MiSeq

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Oxford University Clinical Research Unit, Wellcome Africa Asia Programme, Vietnam

characteristic: INSDC center name

characteristic: INSDC last update

text: public

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text: feces

text: fecal environment

text: Animal distal gut

text: fecal material

text: Viet Nam

text: not provided

text: not provided

text: human-gut

text: metagenome

text: human gut metagenome

text: human gut metagenome

text: Illumina MiSeq


text: UCD National Virus Reference Laboratory

text: public

characteristic: SRA accession

tag: Namespace:UCD National Virus Reference Laboratory

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

unit: years

characteristic: host age

text: human

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text: not provided

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text: Homo sapiens

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text: male

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text: not provided

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text: Oro-Nasopharyngeal swab

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text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

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text: hCoV-19/Ireland/CE-NVRL-S22IRL00343323/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CE-NVRL-S22IRL00344192/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

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text: not provided

characteristic: host subject id

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343337/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343884/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343319/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343313/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343322/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CE-NVRL-S22IRL00344187/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343338/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343218/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343109/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Clare

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CE-NVRL-S22IRL00343102/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CN-NVRL-S22IRL00343941/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cavan

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CN-NVRL-S22IRL00343921/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cavan

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: not provided

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text: Homo sapiens

text: male

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characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CN-NVRL-S22IRL00343600/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cavan

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/CN-NVRL-S22IRL00343611/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

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text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CO-NVRL-S22IRL00344010/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00344050/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00344046/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

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text: public

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characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CO-NVRL-S22IRL00344122/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00343049/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00343061/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CO-NVRL-S22IRL00343060/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Cork

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CO-NVRL-S22IRL00343050/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Cork

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CO-NVRL-S22IRL00343056/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00343500/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/CW-NVRL-S22IRL00344045/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Carlow

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/CW-NVRL-S22IRL00344507/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Carlow

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/CW-NVRL-S22IRL00344509/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343341/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343462/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343985/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343968/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343967/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343907/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343300/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343456/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344218/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343358/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343318/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343969/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344352/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344342/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/D-NVRL-S22IRL00343353/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S22IRL00343879/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344224/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344230/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343302/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343961/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344915/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344442/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344757/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343399/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343723/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343408/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344623/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344921/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344911/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S22IRL00344443/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344939/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344914/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343401/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343390/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344938/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344753/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344858/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344936/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344836/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344318/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344112/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344755/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344918/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344922/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344758/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344316/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344747/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00344908/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344618/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343397/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343177/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00344120/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00344863/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343093/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343175/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343712/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: hCoV-19/Ireland/D-NVRL-S22IRL00343076/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S22IRL00343174/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343396/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343407/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343404/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343730/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343098/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343606/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00343439/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00343107/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00343670/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00342701/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00342475/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

text: hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00342398/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00342794/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: active surveillance in response to outbreak

text: hCoV-19/Ireland/D-NVRL-S22IRL00342793/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: male

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00342912/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00342515/2022

characteristic: title

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00342395/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00342707/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00342915/2022

characteristic: title

characteristic: virus identifier


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: male

characteristic: host sex

text: not provided

characteristic: host subject id

text: not applicable

text: Oro-Nasopharyngeal swab

text: hCoV-19/Ireland/D-NVRL-S22IRL00342384/2022


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UCD National Virus Reference Laboratory

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: not provided

text: Homo sapiens

text: female

text: not provided

text: not applicable

characteristic: isolate

text: Oro-Nasopharyngeal swab

characteristic: isolation source host-associated

characteristic: organism

text: hCoV-19/Ireland/D-NVRL-S22IRL00342389/2022


text: UCD National Virus Reference Laboratory

text: public

text: National Virus Reference Laboratory

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Dublin

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host disease outcome

text: not provided

characteristic: host health state

text: Homo sapiens

text: female

text: not provided

text: not applicable

text: Oro-Nasopharyngeal swab

characteristic: sample capture status

text: hCoV-19/Ireland/D-NVRL-S22IRL00342392/2022

characteristic: title

characteristic: virus identifier