status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Maastricht University Medical Centre (MUMC+)

characteristic: Submitter Id

characteristic: collection date

text: vaginal swab specimens

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: not collected

characteristic: host health state

text: homo sapiens

characteristic: host scientific name

text: case 1

characteristic: isolate

text: human host

text: Chlamydia trachomatis

characteristic: organism

text: Chlamydia trachomatis

characteristic: title


text: Maastricht University Medical Centre (MUMC+)

text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 1

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 2

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 3

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 3

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 4

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 4

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 5

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 5

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 6

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 6

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 7

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 7

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 8

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 8

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 9

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 9

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 10

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 11

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 12

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 12

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 13

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 13

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 14

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 14

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 15

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 15

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 16

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 16

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 17

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 17

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 18

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 18

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 19

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 19

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 20

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 20

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 21

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 22

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 23

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 24

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 24

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 25

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 26

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 26

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 27

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 27

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 28

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 28

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 29

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 29

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 30

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 30

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 31

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 31

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 32

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 32

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: vaginal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 33

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: anorectal swab specimens

text: Netherlands

text: not collected

text: homo sapiens

text: case 33

text: human host

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: FemCure_verification_5mutants-to-1000WT_23S

text: cloned vector with macrolide RAMs, ratio 5 mutants to a 1000 WT 23S rRNA

text: Netherlands

text: not applicable

text: not applicable

text: not applicable

text: DNA fragment cloned in competent E coli

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: FemCure_verification_10mutants-to-1000WT_23S

text: cloned vector with macrolide RAMs, ratio 10 mutants to a 1000 WT 23S rRNA

text: Netherlands

text: not applicable

text: not applicable

text: not applicable

text: DNA fragment cloned in competent E coli

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: FemCure_verification_25mutants-to-1000WT_23S

text: cloned vector with macrolide RAMs, ratio 25 mutants to a 1000 WT 23S rRNA

text: Netherlands

text: not applicable

text: not applicable

text: not applicable

text: DNA fragment cloned in competent E coli

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: FemCure_verification_50mutants-to-1000WT_23S

text: cloned vector with macrolide RAMs, ratio 50 mutants to a 1000 WT 23S rRNA

text: Netherlands

text: not applicable

text: not applicable

text: not applicable

text: DNA fragment cloned in competent E coli

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: FemCure_verification_100mutants-to-1000WT_23S

text: cloned vector with macrolide RAMs, ratio 100 mutants to a 1000 WT 23S rRNA

text: Netherlands

text: not applicable

text: not applicable

text: not applicable

text: DNA fragment cloned in competent E coli

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: public

text: FemCure_verification_200mutants-to-1000WT_23S

text: cloned vector with macrolide RAMs, ratio 200 mutants to a 1000 WT 23S rRNA

text: Netherlands

text: not applicable

text: not applicable

text: not applicable

text: DNA fragment cloned in competent E coli

text: Chlamydia trachomatis

text: Chlamydia trachomatis


text: mixed

characteristic: ArrayExpress-SEX

text: Cephaloboides nidrosiensis

characteristic: ArrayExpress-SPECIES

text: Mixed

characteristic: GENDER

text: SC

text: public

text: Cephaloboides nidrosiensis

characteristic: common name

text: Cephaloboides nidrosiensis

text: Cephaloboides nidrosiensis


text: Blood

characteristic: ArrayExpress-PHENOTYPE

text: unknown

text: Canis familiaris

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Unknown

text: SC

characteristic: INSDC center name

text: public

text: Blood

characteristic: PHENOTYPE

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris


text: Blood

text: unknown

text: Equus asinus

text: Unknown

text: SC

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Blood

characteristic: SRA accession

characteristic: Submitter Id

text: ass

text: Equus asinus

text: Equus asinus


text: Blood

text: unknown

text: Equus caballus

text: Unknown

text: SC

text: public

text: Blood

text: horse

text: Equus caballus

text: Equus caballus


text: Blood

text: unknown

text: Lycaon pictus

text: Unknown

text: SC

text: public

text: Blood

text: African hunting dog

text: Lycaon pictus

text: Lycaon pictus


text: Blood

text: unknown

text: Capra aegagrus hircus

text: Unknown

text: SC

text: public

text: Blood

text: goat

text: Capra hircus

text: Capra hircus


text: Blood

text: unknown

text: Felis catus

text: Unknown

text: SC

text: public

text: Blood

text: domestic cat

text: Felis catus

text: Felis catus


text: Blood

text: unknown

text: Pan troglodytes

text: Unknown

text: SC

text: public

text: Blood

text: chimpanzee

text: Pan troglodytes

text: Pan troglodytes


text: Blood

text: unknown

text: Heterocephalus glaber

text: Unknown

text: SC

text: public

text: Blood

text: naked mole-rat

text: Heterocephalus glaber

text: Heterocephalus glaber


text: Blood

text: unknown

text: Okapia johnstoni

text: Unknown

text: SC

text: public

text: Blood

text: okapi

text: Okapia johnstoni

text: Okapia johnstoni


text: Blood

text: unknown

text: Choeropsis liberiensis

text: Unknown

text: SC

text: public

text: Blood

text: pygmy hippopotamus

text: Hexaprotodon liberiensis

text: Hexaprotodon liberiensis


text: Blood

text: unknown

text: Rangifer tarandus Linnaeus

text: Unknown

text: SC

text: public

text: Blood

text: reindeer

text: Rangifer tarandus

text: Rangifer tarandus


text: Blood

text: unknown

text: Ceratotherium simum

text: Unknown

text: SC

text: public

text: Blood

text: white rhinoceros

text: Ceratotherium simum

text: Ceratotherium simum


text: Blood

characteristic: ArrayExpress-Phenotype

text: unknown

characteristic: ArrayExpress-Sex

text: Canis familiaris

characteristic: ArrayExpress-Species

text: SC

text: public

text: dog

text: Canis lupus familiaris

text: Canis lupus familiaris

characteristic: strain


text: Blood

text: unknown

text: Canis familiaris

text: SC

text: public

text: Canis familiaris

text: Canis sp.

characteristic: organism

text: Canis sp.

characteristic: title


text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

characteristic: broker name

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: creeping speedwell

characteristic: common name

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Vogrie Country Park

characteristic: geographic location (region and locality)

text: on large lawn like space

characteristic: habitat

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

characteristic: lifestage

text: Veronica filiformis

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: whole plant was put into FluidX tubes

characteristic: sample collection method

text: Veronica filiformis

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: 8f0cba22-b241-40bd-b70b-e30361649e77-DTOL-specimen

characteristic: tolid

characteristic: voucher institution url

type: derived from


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: creeping speedwell

text: United Kingdom

text: Vogrie Country Park

text: on large lawn like space

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

text: Veronica filiformis

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: whole plant was put into FluidX tubes

text: Veronica filiformis

text: HERMAPHRODITE MONOECIOUS

text: 3af12a71-d24d-4761-844e-82bb4e8703a7-DTOL-specimen

characteristic: title


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: sweet cherry

characteristic: common name

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Vogrie Country Park

characteristic: geographic location (region and locality)

text: in semi natural woodland

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

text: Prunus avium

text: WHOLE ORGANISM

text: DTOL

text: leaves were cut and put into FluidX tubes

text: Prunus avium

text: HERMAPHRODITE MONOECIOUS

text: f98bd974-c9a5-40f3-bed6-8f5b3677fdb0-DTOL-specimen


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: English gooseberry

text: United Kingdom

text: Roslin Glen

text: in semi natural vegetation near river bank

characteristic: habitat

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

characteristic: lifestage

text: Ribes uva-crispa

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

characteristic: sample collection method

text: Ribes uva-crispa

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: 1ca7e237-7939-4de5-be40-0dca65cee370-DTOL-specimen

characteristic: tolid

characteristic: voucher institution url


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: Gullane

text: on rough and sandy turf

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

text: Viola hirta

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Viola hirta

text: HERMAPHRODITE MONOECIOUS

text: e1a9592b-6556-40d7-8437-289503371ddb-DTOL-specimen

characteristic: title


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Gullane

characteristic: geographic location (region and locality)

text: on rough and sandy turf

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

text: Viola hirta

text: WHOLE ORGANISM

text: DTOL

text: Viola hirta

text: HERMAPHRODITE MONOECIOUS

text: 3efaf4e2-d507-4d1d-930b-1de3408fa31c-DTOL-specimen


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: Gullane

text: ruderal habitat on sandy soil

characteristic: habitat

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

characteristic: lifestage

text: Cerastium semidecandrum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: whole plant was put into FluidX tubes

characteristic: sample collection method

text: Cerastium semidecandrum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: 1fb717b9-c856-4cde-b493-1c2a356359f1-DTOL-specimen

characteristic: tolid


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: Gullane

text: on grassy and rocky outcrop

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

text: Cerastium diffusum

text: WHOLE ORGANISM

text: DTOL

text: whole plant was put into FluidX tubes

text: Cerastium diffusum

text: HERMAPHRODITE MONOECIOUS

text: b9302f51-5770-4cd8-b825-f8db210cde3c-DTOL-specimen

characteristic: voucher institution url


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Gullane

text: on grassy and rocky outcrop

text: MARKUS RUHSAM

text: ROYAL BOTANIC GARDEN EDINBURGH

text: sporophyte

text: Cerastium diffusum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: whole plant was put into FluidX tubes

text: Cerastium diffusum

text: HERMAPHRODITE MONOECIOUS

text: 2e160198-d885-4f81-8457-bfc556522fd1-DTOL-specimen

characteristic: title


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

unit: m

characteristic: elevation

text: United Kingdom

characteristic: geographic location (longitude)

text: Scotland | Dumfriesshire | Grey Mare's Tail Reserve | Midlaw Linn

characteristic: geographic location (region and locality)

text: Steep gully; over peaty soil in crevices of crumbly rock outcrop

characteristic: habitat

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Oedipodium griffithianum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Living plants wild collected into tubs for processing in lab

characteristic: sample collection method

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: a800322a-3b90-4d98-90ca-6fb585852c3b-DTOL-specimen


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: b348e7c8-7b99-4c60-99dd-4c5e209b998f-DTOL-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 649d9185-7ffe-4018-aa6e-12367ce31319-DTOL-specimen

characteristic: title

characteristic: voucher institution url


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: elevation

text: United Kingdom

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Oedipodium griffithianum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

characteristic: sample collection method

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 258f73c2-46ab-4b4a-974d-c569fbee2807-DTOL-specimen


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: d812d34f-4ba1-4e03-8ec0-35cee6361304-DTOL-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: b1134513-bb18-4466-a6ef-7c553aef1354-DTOL-specimen

characteristic: title

characteristic: voucher institution url


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: elevation

text: United Kingdom

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Oedipodium griffithianum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

characteristic: sample collection method

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 8753cd20-4f14-4f89-a811-b03fa77049e8-DTOL-specimen


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: 21d4553b-f83b-444f-8b12-88ebb56a5db6-DTOL-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 4cb73444-03f1-4416-aefc-1670f4c3d84e-DTOL-specimen

characteristic: title

characteristic: voucher institution url


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: elevation

text: United Kingdom

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Oedipodium griffithianum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

characteristic: sample collection method

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: f5e60fad-db3c-44df-9eeb-a2cdad4b250c-DTOL-specimen


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: 3a7dec4a-1714-4d79-83d8-c1f07dafca60-DTOL-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 68a2a394-598e-4f97-8346-c7ebe7769eee-DTOL-specimen

characteristic: title

characteristic: voucher institution url


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: elevation

text: United Kingdom

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Oedipodium griffithianum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

characteristic: sample collection method

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 1407f189-b6c5-4780-a4f6-5ffabd976f8b-DTOL-specimen


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: 77641710-ebce-4f96-ad6b-b170f58f6c42-DTOL-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: Scotland | Dumfriesshire | Grey Mare's Tail Reserve | Midlaw Linn

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 7756c9eb-600c-4fb0-9fb3-e69c623830f6-DTOL-specimen

characteristic: title

characteristic: voucher institution url


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: elevation

text: United Kingdom

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: Steep gully; over peaty soil in crevices of crumbly rock outcrop

characteristic: habitat

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Oedipodium griffithianum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Living plants wild collected into tubs for processing in lab

characteristic: sample collection method

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 9b1d04fb-c587-4b63-9834-1ef0f55b2541-DTOL-specimen


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: 6f3591c9-4c82-40b9-bde8-331aeca916dd-DTOL-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 02f30e30-d6e2-4baf-81e1-5931e5129853-DTOL-specimen

characteristic: title

characteristic: voucher institution url


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: elevation

text: United Kingdom

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Oedipodium griffithianum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

characteristic: sample collection method

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 8dd3f9c8-6d8b-4ae8-b817-c80fd21a544d-DTOL-specimen


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: 2c927491-b323-4f31-aa43-325531900cc1-DTOL-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 55440863-67f9-4a4d-964e-6ee70c62af8b-DTOL-specimen

characteristic: title

characteristic: voucher institution url


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: elevation

text: United Kingdom

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

characteristic: habitat

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

characteristic: lifestage

text: Oedipodium griffithianum

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

characteristic: sample collection method

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 9dbee8a4-7d27-495f-a19b-1842b6589930-DTOL-specimen


characteristic: ENA-CHECKLIST

text: Royal Botanic Garden Edinburgh

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

characteristic: SRA accession

characteristic: Submitter Id

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: barcoding center

text: COPO

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

text: United Kingdom

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

characteristic: sex

text: d2300962-b5c2-45b5-92cc-e4c292594207-DTOL-specimen

characteristic: tolid


text: Royal Botanic Garden Edinburgh

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDEN EDINBURGH

text: COPO

characteristic: broker name

text: DAVID BELL | DAVID LONG | LIZ KUNGU

text: ROYAL BOTANIC GARDEN EDINBURGH

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: DAVID BELL

text: ROYAL BOTANIC GARDEN EDINBURGH

text: gametophyte

text: Oedipodium griffithianum

characteristic: organism

text: WHOLE ORGANISM

text: DTOL

text: Oedipodium griffithianum

text: HERMAPHRODITE MONOECIOUS

text: 31c9668d-8af4-4024-b7e4-5af984a7168b-DTOL-specimen

characteristic: title

characteristic: voucher institution url


characteristic: ENA first public

characteristic: External Id

text: Institute of Oncology research (IOR)

characteristic: INSDC last update

text: public

characteristic: INSDC status

tag: Namespace:Institute of Oncology research (IOR)

unit: week

characteristic: age

text: ArrayExpress

text: not collected

text: house mouse

characteristic: common name

text: Protocols: GEMM prostate glands were harvested and snap frozen in RNase-free conditions. Total RNA was extracted from GEMM prostates as described in following details. Briefly, the entire mouse prostates were disrupted with pestle (Axygen PES-15-B-SI Disposable Tissue Grinder Pestle) in 1.5 ml Eppendorf tubes loaded with 350 µl of RLT buffer (RNeasy® Mini Kit, Qiagen, cat. Numb. 74104). RNA was extracted by following RNeasy® Mini Kit instructions. The RNA quality was verified by the spectrophotometric analysis by using 2100 Bioanalyzer System (Agilent, cat. Numb. G2939BA). Only samples with R.I.N. (RNA integrity number) 8-10 were used for Poly-A RNA sequencing analysis. NEBNext Ultra Directional RNA Library Prep Kit for Illumina (New England BioLabs Inc.) was employed with the NEBNext Multiplex Oligos for Illumina (New England BioLabs Inc.) and NEBNext® Poly(A) mRNA Magnetic Isolation Module for cDNA synthesis with the addition of barcode sequences.

characteristic: description

text: cEHF knockout

characteristic: genotype

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Mus musculus

text: Mus musculus

text: prostate gland

characteristic: organism part

text: Mus musculus

text: male


characteristic: ENA-CHECKLIST

text: Institute of Oncology research (IOR)

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: house mouse

text: R26ERG_cEHF knockout

text: not collected

text: not applicable

text: Mus musculus

text: Mus musculus

text: prostate gland

text: Mus musculus

text: male

characteristic: sex


characteristic: ENA first public

characteristic: External Id

text: Institute of Oncology research (IOR)

text: public

text: ArrayExpress

text: not collected

text: house mouse

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Mus musculus

characteristic: organism

text: Mus musculus

text: prostate gland

text: Mus musculus

text: male

characteristic: title


text: Dalhousie University

characteristic: GAL

text: Tree of Life Programme

text: DARIA TASHYREVA

text: INSTITUTE OF PARASITOLOGY, BIOLOGY CENTRE

characteristic: collecting institution

text: Czechia

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: BIOLOGY CENTRE

characteristic: geographic location (region and locality)

text: LABORATORY

characteristic: habitat

text: DARIA TASHYREVA

text: not collected

characteristic: lifestage

text: Candidatus Syngnamydia salmonis

text: **OTHER SOMATIC ANIMAL TISSUE**

characteristic: original collection date

text: NOT PROVIDED

characteristic: original geographic location

text: asg

characteristic: project name

text: Both for sequencing

characteristic: relationship

characteristic: sample symbiont of

text: Candidatus Syngnamydia salmonis

text: NOT COLLECTED

text: NOT APPLICABLE

text: Y

characteristic: symbiont

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Seoul National University

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Seoul National University

characteristic: Submitter Id

characteristic: collection date

text: A sample derived from a patient diagnosed with TB and part of the study for the creation of the Pan-Lineage Reference Genome.

characteristic: description

text: South Korea

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (KR 033)


text: Seoul National University

text: public

text: South Korea

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

characteristic: organism

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (KR 034)

characteristic: title


text: Seoul National University

text: public

text: South Korea

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (KR 045)


text: Seoul National University

text: public

text: South Korea

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (KR 046)


text: Seoul National University

text: public

text: South Korea

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (KR 048)


text: Seoul National University

text: public

text: South Korea

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (KR 288)


text: Seoul National University

text: public

text: South Korea

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (KR 392)


text: Seoul National University

text: public

text: South Korea

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (KR 436)


text: INRA JOUY-EN-JOSAS

text: public

text: ena-SAMPLE-TAB-05-12-2023-13:51:42:820-56874

tag: Namespace:INRA JOUY-EN-JOSAS

text: LABEO

characteristic: collecting institution

text: LABEO

characteristic: collector name

text: A/equine/South Africa/4/2003(H3N8)

text: South Africa

text: Equine

characteristic: host common name

text: diseased

text: Equus caballus

text: not provided

characteristic: host sex

text: Horse-SA

characteristic: host subject id

text: RT-qPCR

characteristic: influenza test method

text: Positive

characteristic: influenza test result

text: A

characteristic: influenza virus type

text: Influenza A virus (A/equine/South Africa/4/2003(H3N8))

characteristic: other pathogens test result

characteristic: other pathogens tested

characteristic: serotype

text: South Africa


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: INRA JOUY-EN-JOSAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-05-12-2023-15:33:53:264-56907

characteristic: Submitter Id

text: LABEO

characteristic: collection date

text: LABEO

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: N

characteristic: geographic location (region and locality)

text: Equine

text: diseased

text: Equus caballus

text: not provided

text: Horse-Richmond

text: RT-qPCR

text: Positive

text: A

text: Influenza A virus (A/equine/Richmond/1/2007(H3N8))

text: Richmond


text: INRA JOUY-EN-JOSAS

text: public

text: ena-SAMPLE-TAB-05-12-2023-15:33:53:265-56908

text: LABEO

characteristic: collecting institution

text: LABEO

characteristic: collector name

text: France

text: N

text: Equine

characteristic: host common name

text: diseased

characteristic: host health state

text: Equus caballus

characteristic: host scientific name

text: not provided

characteristic: host sex

text: Horse-Beuvron

characteristic: host subject id

text: RT-qPCR

characteristic: influenza test method

text: Positive

characteristic: influenza test result

text: A

text: Influenza A virus (A/equine/Beuvron-en-Auge/2/2009(H3N8))

characteristic: organism

text: Beuvron-en-Auge

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: INRA JOUY-EN-JOSAS

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-05-12-2023-15:33:53:265-56909

text: LABEO

text: LABEO

text: France

text: N

text: Equine

text: diseased

text: Equus caballus

text: not provided

text: Horse-Paris

text: RT-qPCR

text: Positive

text: A

characteristic: influenza virus type

text: Equine influenza virus H3N8

characteristic: other pathogens test result

characteristic: other pathogens tested

text: Equine influenza virus H3N8

characteristic: serotype

text: Paris


text: Aalborg University

text: public

tag: Namespace:Aalborg University

characteristic: Submitter Id

characteristic: collection date

text: Kivik

characteristic: description

text: Sweden

characteristic: geographic location (country and/or sea)

text: uncultured bacterium

text: uncultured bacterium


text: Aalborg University

text: public

text: Svedala

text: Sweden

text: uncultured bacterium

characteristic: organism

text: uncultured bacterium


text: Aalborg University

text: public

text: Dege G1 yta

text: Sweden

text: uncultured bacterium

text: uncultured bacterium

characteristic: title


characteristic: ENA first public

text: Aalborg University

text: public

text: Dege G1 mel

text: Sweden

text: uncultured bacterium

text: uncultured bacterium


characteristic: ENA-CHECKLIST

text: Aalborg University

text: public

text: Dege G1 bot

text: Sweden

text: uncultured bacterium

text: uncultured bacterium


characteristic: External Id

text: Aalborg University

text: public

text: Dege G2 yta

text: Sweden

text: uncultured bacterium

text: uncultured bacterium


text: Aalborg University

characteristic: INSDC center name

text: public

text: Dege G2 mel

text: Sweden

text: uncultured bacterium

text: uncultured bacterium


text: Aalborg University

characteristic: INSDC last update

text: public

text: Dege G2 bot

text: Sweden

text: uncultured bacterium

text: uncultured bacterium


text: Aalborg University

text: public

characteristic: INSDC status

text: Dege Sand

text: Sweden

text: uncultured bacterium

text: uncultured bacterium


text: WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

text: public

characteristic: SRA accession

text: sludge

characteristic: broad-scale environmental context

text: AI4HMO t0 DNA extract 27/3/22 f1

text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bioreactor

characteristic: local environmental context

text: synthetic metagenome

characteristic: pcr primers

text: BIG-Syc continuous fermentations on HMOs

unit: synthetic

characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: AI4HMO t0 DNA extract 27_3_22 f1


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: AI4HMO t0 DNA extract 27/3/22 f2

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t0 DNA extract 27_3_22 f2


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: sludge

text: AI4HMO t0 DNA extract 27/3/22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t0 DNA extract 27_3_22 f3

characteristic: title


text: public

characteristic: INSDC status

characteristic: SRA accession

text: sludge

characteristic: broad-scale environmental context

text: AI4HMO t0 DNA extract 8/4/22 f1��

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t0 DNA extract 8_4_22 f1��


text: public

text: sludge

text: AI4HMO t0 DNA extract 8/4/22 f2

text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t0 DNA extract 8_4_22 f2


text: public

text: sludge

text: AI4HMO t0 DNA extract 8/4/22 f3

text: liquid broth

text: Netherlands

text: bioreactor

characteristic: local environmental context

text: synthetic metagenome

characteristic: pcr primers

characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t0 DNA extract 8_4_22 f3


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: AI4HMO t116C DNA extract 14/4/22 f1��

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: AI4HMO t116C DNA extract 14_4_22 f1��


text: public

text: sludge

text: AI4HMO t116C DNA extract 14/4/22 f2

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t116C DNA extract 14_4_22 f2


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

text: sludge

text: AI4HMO t116C DNA extract 14/4/22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t116C DNA extract 14_4_22 f3


text: public

characteristic: INSDC status

characteristic: SRA accession

text: sludge

text: AI4HMO t119C DNA extract 2/4/22 f1

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t119C DNA extract 2_4_22 f1

characteristic: title


text: public

text: sludge

characteristic: broad-scale environmental context

text: AI4HMO t119C DNA extract 2/4/22 f2

text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t119C DNA extract 2_4_22 f2


text: public

text: sludge

text: AI4HMO t119C DNA extract 2/4/22 f3

text: liquid broth

text: Netherlands

characteristic: geographic location (longitude)

text: bioreactor

characteristic: local environmental context

text: synthetic metagenome

characteristic: pcr primers

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t119C DNA extract 2_4_22 f3


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: AI4HMO t19B DNA extract 28/3/22 f1

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t19B DNA extract 28_3_22 f1


text: public

text: sludge

text: AI4HMO t19B DNA extract 28/3/22 f2

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: AI4HMO t19B DNA extract 28_3_22 f2


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: AI4HMO t19B DNA extract 28/3/22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t19B DNA extract 28_3_22 f3


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sludge

text: AI4HMO t21B DNA extract 9/4/22 f1�

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t21B DNA extract 9_4_22 f1�


text: public

text: sludge

characteristic: broad-scale environmental context

text: AI4HMO t21B DNA extract 9/4/22 f2

text: liquid broth

characteristic: environmental medium

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t21B DNA extract 9_4_22 f2

characteristic: title


text: public

text: sludge

text: AI4HMO t21B DNA extract 9/4/22 f3

text: liquid broth

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bioreactor

characteristic: local environmental context

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t21B DNA extract 9_4_22 f3


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: AI4HMO t24C DNA extract 10/4/22 f1��

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: pcr primers

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t24C DNA extract 10_4_22 f1��


text: public

text: sludge

text: AI4HMO t24C DNA extract 10/4/22 f2

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t24C DNA extract 10_4_22 f2


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: AI4HMO t24C DNA extract 10/4/22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: AI4HMO t24C DNA extract 10_4_22 f3


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: sludge

text: AI4HMO t48C DNA extract 11/4/22 f1��

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t48C DNA extract 11_4_22 f1��


text: public

characteristic: SRA accession

text: sludge

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text: AI4HMO t48C DNA extract 11/4/22 f2

text: liquid broth

characteristic: environmental medium

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t48C DNA extract 11_4_22 f2


text: public

text: sludge

text: AI4HMO t48C DNA extract 11/4/22 f3

text: liquid broth

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t48C DNA extract 11_4_22 f3

characteristic: title


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: AI4HMO t72C DNA extract 12/4/22 f1��

text: liquid broth

text: Netherlands

text: bioreactor

characteristic: local environmental context

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t72C DNA extract 12_4_22 f1��


text: public

text: sludge

text: AI4HMO t72C DNA extract 12/4/22 f2

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

characteristic: pcr primers

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t72C DNA extract 12_4_22 f2


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: AI4HMO t72C DNA extract 12/4/22 f3

text: liquid broth

text: Netherlands

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characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t72C DNA extract 12_4_22 f3


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: sludge

text: AI4HMO t76C DNA extract 31/3/22 f1

text: liquid broth

text: Netherlands

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text: synthetic metagenome

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characteristic: sequencing method

text: AI4HMO t76C DNA extract 31_3_22 f1


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characteristic: SRA accession

text: sludge

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text: AI4HMO t76C DNA extract 31/3/22 f2

text: liquid broth

text: Netherlands

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text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t76C DNA extract 31_3_22 f2


text: public

text: sludge

text: AI4HMO t76C DNA extract 31/3/22 f3

text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI4HMO t76C DNA extract 31_3_22 f3


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: AI4HMO t96C DNA extract 1/4/22 f1

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

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text: Illumina NovaSeq 6000

text: AI4HMO t96C DNA extract 1_4_22 f1

characteristic: title


text: public

text: sludge

text: AI4HMO t96C DNA extract 1/4/22 f2

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

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text: synthetic metagenome

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text: Illumina NovaSeq 6000

text: AI4HMO t96C DNA extract 1_4_22 f2


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: AI4HMO t96C DNA extract 1/4/22 f3

text: liquid broth

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characteristic: pcr primers

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text: AI4HMO t96C DNA extract 1_4_22 f3


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: sludge

text: AI4HMO t96C DNA extract 13/4/22 f1��

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: project name

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text: Illumina NovaSeq 6000

text: AI4HMO t96C DNA extract 13_4_22 f1��


text: public

characteristic: SRA accession

text: sludge

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text: AI4HMO t96C DNA extract 13/4/22 f2

text: liquid broth

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characteristic: sequencing method

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text: sludge

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text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

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text: sludge

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text: liquid broth

text: Netherlands

characteristic: geographic location (longitude)

text: bioreactor

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text: synthetic metagenome

text: Illumina NovaSeq 6000


text: public

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characteristic: geographic location (country and/or sea)

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text: AI5HMOB t0 DNA extract 22_9_22 f1

characteristic: title


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text: liquid broth

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text: AI5HMOB t0 DNA extract 22_9_22 f2


characteristic: INSDC center name

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text: liquid broth

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characteristic: SRA accession

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text: Sample AI5HMOB t120C DNA extract 28_9_22 f1

text: liquid broth

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text: AI5HMOB t120C DNA extract 28_9_22 f1


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text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

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text: Illumina NovaSeq 6000

characteristic: sequencing method

text: AI5HMOB t120C DNA extract 28_9_22 f2


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characteristic: Submitter Id

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text: Sample AI5HMOB t120C DNA extract 28_9_22 f3

text: liquid broth

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characteristic: organism

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text: AI5HMOB t120C DNA extract 28_9_22 f3


text: public

text: sludge

text: Sample AI5HMOB t146C DNA extract 29_9_22 f1

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

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text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t146C DNA extract 29_9_22 f1


characteristic: ENA first public

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text: public

text: sludge

text: Sample AI5HMOB t146C DNA extract 29_9_22 f2

text: liquid broth

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text: AI5HMOB t146C DNA extract 29_9_22 f2

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text: liquid broth

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characteristic: SRA accession

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text: Sample AI5HMOB t19B DNA extract 23_9_22 f1

text: liquid broth

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text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

text: bioreactor

text: synthetic metagenome

characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t19B DNA extract 23_9_22 f2


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: Sample AI5HMOB t19B DNA extract 23_9_22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: AI5HMOB t19B DNA extract 23_9_22 f3


text: public

text: sludge

text: Sample AI5HMOB t24C DNA extract 24_9_22 f1

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t24C DNA extract 24_9_22 f1


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: Sample AI5HMOB t24C DNA extract 24_9_22 f2

text: liquid broth

text: Netherlands

characteristic: geographic location (longitude)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t24C DNA extract 24_9_22 f2


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: sludge

text: Sample AI5HMOB t24C DNA extract 24_9_22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t24C DNA extract 24_9_22 f3

characteristic: title


text: WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

text: public

characteristic: SRA accession

text: sludge

characteristic: broad-scale environmental context

text: Sample AI5HMOB t48C DNA extract 25_9_22 f1

text: liquid broth

text: Netherlands

text: bioreactor

characteristic: local environmental context

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t48C DNA extract 25_9_22 f1


text: public

text: sludge

text: Sample AI5HMOB t48C DNA extract 25_9_22 f2

text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

text: bioreactor

text: synthetic metagenome

characteristic: pcr primers

text: BIG-Syc continuous fermentations on HMOs

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t48C DNA extract 25_9_22 f2


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: Sample AI5HMOB t48C DNA extract 25_9_22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t48C DNA extract 25_9_22 f3


text: public

text: sludge

text: Sample AI5HMOB t72C DNA extract 26_9_22 f1

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: AI5HMOB t72C DNA extract 26_9_22 f1


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: Sample AI5HMOB t72C DNA extract 26_9_22 f2

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t72C DNA extract 26_9_22 f2


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: sludge

text: Sample AI5HMOB t72C DNA extract 26_9_22 f3

text: liquid broth

text: Netherlands

characteristic: geographic location (longitude)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t72C DNA extract 26_9_22 f3


text: public

characteristic: SRA accession

text: sludge

characteristic: broad-scale environmental context

text: Sample AI5HMOB t73C DNA extract 26_9_22 f1

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t73C DNA extract 26_9_22 f1

characteristic: title


text: public

text: sludge

text: Sample AI5HMOB t73C DNA extract 26_9_22 f2

text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

text: bioreactor

characteristic: local environmental context

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t73C DNA extract 26_9_22 f2


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: Sample AI5HMOB t73C DNA extract 26_9_22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: pcr primers

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t73C DNA extract 26_9_22 f3


text: public

text: sludge

text: Sample AI5HMOB t96C DNA extract 27_9_22 f1

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t96C DNA extract 27_9_22 f1


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: Sample AI5HMOB t96C DNA extract 27_9_22 f2

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: AI5HMOB t96C DNA extract 27_9_22 f2


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: sludge

text: Sample AI5HMOB t96C DNA extract 27_9_22 f3

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: AI5HMOB t96C DNA extract 27_9_22 f3


text: public

characteristic: SRA accession

text: sludge

characteristic: broad-scale environmental context

text: Sample DES from DNA extraction kit for DNA extract dilution negative control

text: liquid broth

text: Netherlands

characteristic: geographic location (longitude)

text: bioreactor

text: blank sample

text: blank sample

text: Illumina NovaSeq 6000


text: public

text: sludge

text: Sample DNA_extraction_negative_7_10_22

text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

text: bioreactor

text: blank sample

text: blank sample

text: Illumina NovaSeq 6000

characteristic: title


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: liquid broth

text: Netherlands

text: bioreactor

characteristic: local environmental context

text: blank sample

text: blank sample

text: Illumina NovaSeq 6000


text: public

text: sludge

text: Sample Inoculum_inoculated_22.9.22

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

text: synthetic metagenome

characteristic: pcr primers

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: Inoculum 22.9.22


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: Sample Inoculum_inoculated_26.9.22

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: project name

text: synthetic metagenome

text: Illumina NovaSeq 6000

text: Inoculum 26.9.22


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: sludge

text: Inoculum inoculated 27/3/22

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: Inoculum 27_3_22


text: public

characteristic: SRA accession

text: sludge

characteristic: broad-scale environmental context

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

characteristic: organism

text: synthetic metagenome

text: Illumina NovaSeq 6000


text: public

text: sludge

text: Sample mock_3_3 positive control for amplicon sequencing

text: liquid broth

characteristic: environmental medium

text: Netherlands

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000


text: public

characteristic: Submitter Id

text: sludge

characteristic: collection date

text: Sample mock_4_2 positive control for amplicon sequencing

text: liquid broth

text: Netherlands

text: bioreactor

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000

characteristic: title


text: WAGENINGEN UNIVERSITY, LABORATORY OF MICROBIOLOGY

text: public

text: sludge

text: Sample mock_4 positive control for amplicon sequencing

characteristic: description

text: liquid broth

text: Netherlands

characteristic: geographic location (country and/or sea)

text: bioreactor

characteristic: local environmental context

text: synthetic metagenome

text: synthetic metagenome

text: Illumina NovaSeq 6000


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: sludge

text: Sample PCR_NC_1 negative control for amplicon sequencing

text: liquid broth

text: Netherlands

text: bioreactor

text: blank sample

characteristic: pcr primers

text: blank sample

text: Illumina NovaSeq 6000


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: sludge

text: Sample PCR_NC_2 negative control for amplicon sequencing

text: liquid broth

text: Netherlands

text: bioreactor

text: blank sample

text: BIG-Syc continuous fermentations on HMOs

characteristic: project name

text: blank sample

text: Illumina NovaSeq 6000


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: SRA accession

text: not provided

text: human

characteristic: common name

text: not provided

text: Homo sapiens

text: Homo sapiens


text: Anopheles gambia

text: SC

text: public

text: not provided

text: African malaria mosquito

text: not provided

text: Anopheles gambiae

characteristic: organism

text: Anopheles gambiae


text: Gyeongsang National University Animal Genomics Laboratory

text: public

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: blood cell

text: not collected

text: dog

text: Protocols: Two cloned dogs(NT-2, NT-4) were produced via SCNT using ear fibroblasts from a 5-year-old male German shepherd. For whole genome sequencing, blood and ear fibroblasts were collected from a 6-year-old male German shepherd dog, and blood samples were collected from  4-month-old cloned dogs. Experiments were authorized by the Animal Center for Biomedical Experimentation at the National Institute of Animal Science of the Rural Development Administration (approval number 2015-143 on 21 May 2015). Genomic DNA was extracted from the blood of cloned dogs and original dog with a Wizard Genomic DNA Purification Kit (Promega, Madison, WI, USA) and from original dog cells with PureLink™ Genomic DNA Mini Kit (Thermo Fisher Scientific, Carlsbad, CA, USA). Individual libraries were generated TruSeq Nano DNA Sample Prep Kit (Illumina, San Diego, CA, USA).

text: not collected

text: not applicable

characteristic: isolate

text: Canis lupus familiaris

text: Canis lupus familiaris

text: blood

characteristic: organism part

text: original dog

characteristic: phenotype

text: Canis lupus familiaris

text: male

characteristic: sex


text: public

characteristic: Submitter Id

text: ArrayExpress

text: fibroblast

text: not collected

characteristic: collection date

text: dog

characteristic: description

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Canis lupus familiaris

text: Canis lupus familiaris

text: ear

text: original dog

text: Canis lupus familiaris

text: male

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

unit: month

text: ArrayExpress

text: blood cell

text: not collected

text: dog

text: not collected

text: not applicable

text: Canis lupus familiaris

text: Canis lupus familiaris

text: blood

text: cloned dog

text: Canis lupus familiaris

text: male


text: Anopheles gambiae

characteristic: ArrayExpress-SPECIES

text: SC

text: public

characteristic: SRA accession

text: not provided

text: African malaria mosquito

characteristic: common name

text: not provided

text: Anopheles gambiae

text: Anopheles gambiae


text: ZOE

text: public

text: Stool sample from the ZOE PREDICT3 study (US 2021)

text: USA

text: human gut metagenome

characteristic: organism

text: human gut metagenome


text: CeMESS

text: public

characteristic: altitude

text: Alejandro Oceguera Figueroa; Sebastian Kvist; Danielle de Carle

text: Metagenomic sequencing of Haementeria sp. species voucher COZEM-ANN-HIR-001. Sample originates from the bacteriomes of a pool of two individuals from the same population.

text: Panama

text: Provincia de Herrera, Ciénega de las Macanas

characteristic: geographic location (region and locality)

text: Alejandro Oceguera Figueroa

text: 8.10303 N 80.593974 W

text: Haementeria sp. COZEM-ANN-HIR-001/002

text: Haementeria sp. COZEM-ANN-HIR-001/002

text: pooled bacteriomes of two individuals


text: CeMESS

text: public

text: Candidatus Providencia siddallii strain acuecueyetzin-TABTEA, obligate endosymbiont of the leech Haementeria acuecueyetzin TABTEA genome sequencing from pooled host's bacteriomes

text: Panama

text: Haementeria sp. COZEM-ANN-HIR-001/002

characteristic: host scientific name

text: 8.10303 N 80.593974 W

characteristic: strain

text: host's pooled bacteriomes (two individuals)

text: Candidatus Pluralibacter haementeriicola strain panamensis-COZEM-ANN-HIR-001, obligate endosymbiont of the leech Haementeria sp. species voucher COZEM-ANN-HIR-001


text: Teagasc Food Research Center

text: public

characteristic: Submitter Id

text: Temperate Grassland biome

characteristic: broad-scale environmental context

characteristic: depth

text: Illumina NextSeq 500 (2 x 150)

text: not provided

characteristic: elevation

text: soil

characteristic: environmental medium

text: Ireland

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

characteristic: local environmental context

text: soil metagenome

characteristic: project name

text: soil metagenome


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: UDE

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: collection date

text: malaise trap sample

characteristic: description

text: Germany

characteristic: geographic location (country and/or sea)

text: invertebrate metagenome

text: invertebrate metagenome

characteristic: title


text: GuillaumeLabUH

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: red flour beetle

characteristic: common name

text: females, whole body

text: Switzerland

text: Tribolium castaneum

characteristic: organism

text: Tribolium castaneum


text: UNIBE-IG

text: public

text: horse

text: Franches-Montagnes - female

text: Switzerland

text: Equus caballus

text: Equus caballus

text: Franches-Montagnes


text: EMBL

text: public

text: human-associated habitat [ENVO:00009003]

characteristic: environment (biome)

text: intestine environment [ENVO:2100002]

characteristic: environment (feature)

text: feces [ENVO:00002003]

characteristic: environment (material)

text: Germany

text: human-associated

characteristic: human-associated environmental package

text: metagenome

characteristic: investigation type

text: human gut metagenome

text: human gut metagenome

text: illumina

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: Tree of Life Programme

text: public

text: KATE ROBB

text: Marine Mammal Conservation Foundation

characteristic: collecting institution

text: Burrunan dolphin

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Victoria | Gippsland Lakes | Metung

characteristic: geographic location (region and locality)

text: Marine

characteristic: habitat

text: KATE ROBB

text: Marine Mammal Conservation Foundation

text: adult

characteristic: lifestage

text: Tursiops australis

text: WHOLE ORGANISM

characteristic: organism part

text: ToL

characteristic: project name

text: Tursiops australis

text: MALE

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: KATE ROBB

text: Marine Mammal Conservation Foundation

characteristic: collection date

text: Burrunan dolphin

characteristic: common name

text: Australia

characteristic: geographic location (country and/or sea)

text: Victoria | Gippsland Lakes | Metung

text: Marine

text: KATE ROBB

text: Marine Mammal Conservation Foundation

text: adult

text: Tursiops australis

characteristic: organism

text: LIVER

characteristic: sample derived from

text: Tursiops australis

text: MALE

text: NOT PROVIDED

text: N

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

characteristic: GAL

text: Tree of Life Programme

text: public

text: KATE ROBB

text: Marine Mammal Conservation Foundation

characteristic: collecting institution

text: Burrunan dolphin

text: Australia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Victoria | Gippsland Lakes | Metung

characteristic: geographic location (region and locality)

text: Marine

characteristic: habitat

text: KATE ROBB

text: Marine Mammal Conservation Foundation

text: adult

text: Tursiops australis

text: KIDNEY

text: Tursiops australis

text: MALE

text: NOT PROVIDED

text: N


text: Sanger Institute

text: Tree of Life Programme

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: KATE ROBB

text: Marine Mammal Conservation Foundation

text: Burrunan dolphin

text: Australia

text: Victoria | Gippsland Lakes | Metung

text: Marine

text: KATE ROBB

text: Marine Mammal Conservation Foundation

text: adult

characteristic: lifestage

text: Tursiops australis

text: MUSCLE

characteristic: organism part

characteristic: project name

text: Tursiops australis

text: MALE

characteristic: sex

text: NOT PROVIDED

text: N

characteristic: symbiont

characteristic: tolid


text: INSTITUT PASTEUR

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: France

characteristic: geographic location (country and/or sea)

text: Vibrio cholerae

characteristic: organism

text: Vibrio cholerae

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Institut de recherche experimentale et clinique - IREC

text: public

text: Clinical isolate CTMA_1918

characteristic: description

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1918


characteristic: INSDC center name

text: public

text: Clinical isolate CTMA_1921

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1921


text: public

characteristic: INSDC status

text: Clinical isolate CTMA_1924

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1924


text: public

text: Clinical isolate CTMA_1927

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1927


text: public

text: Clinical isolate CTMA_1929

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1929


text: public

text: Clinical isolate CTMA_1945

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1945


text: public

text: Clinical isolate CTMA_1950

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1950


text: public

text: Clinical isolate CTMA_1951

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1951


text: University of Jyvaskyla

text: public

text: uninoculated

characteristic: biotic regimen

text: subpolar coniferous forest biome [ENVO:01000250]

characteristic: broad-scale environmental context

text: Kesijarvi log 001 year 2019

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 2

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

text: ITS3:GCATCGATGAAGAACGCAGC;ITS4:TCCTCCGCTTATTGATATGCT

characteristic: pcr primers

text: The role of stochasticity in fungal community assembly – explaining apparent stochasticity by field experiments

text: wood decay metagenome

text: nuclear ribosomal internal transcribed spacer

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 001 year 2019


characteristic: ENA first public

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: inoculated with Fomitopsis rosea (taxid 34475)

characteristic: collection date

text: Kesijarvi log 001 year 2021

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

text: Decay stage 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: organism

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 001 year 2021

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: uninoculated

characteristic: biotic regimen

characteristic: broad-scale environmental context

text: Kesijarvi log 002 year 2019

characteristic: description

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

characteristic: geographic location (latitude)

text: Decay stage 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

text: wood decay metagenome

text: Kesijarvi log 002 year 2019


text: University of Jyvaskyla

text: public

text: uninoculated

text: Kesijarvi log 004 year 2019

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (longitude)

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 004 year 2019


characteristic: ENA first public

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Kesijarvi log 004 year 2021

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

text: Decay stage 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: organism

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 004 year 2021

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: biotic regimen

characteristic: broad-scale environmental context

text: Kesijarvi log 005 year 2021

characteristic: description

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

characteristic: geographic location (latitude)

text: Decay stage 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

text: wood decay metagenome

text: Kesijarvi log 005 year 2021


text: University of Jyvaskyla

text: public

text: Kesijarvi log 006 year 2021

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (longitude)

text: Decay stage 2

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 006 year 2021


characteristic: ENA first public

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: uninoculated

characteristic: collection date

text: Kesijarvi log 007 year 2019

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: organism

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 007 year 2019

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: uninoculated

characteristic: biotic regimen

characteristic: broad-scale environmental context

text: Kesijarvi log 008 year 2019

characteristic: description

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

characteristic: geographic location (latitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

text: wood decay metagenome

text: Kesijarvi log 008 year 2019