status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Max Planck Institute for Biology Tuebingen

characteristic: Submitter Id

text: thale cress

characteristic: common name

text: met1 mutant

characteristic: description

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis thaliana

characteristic: subspecific genetic lineage name

text: Line 1

characteristic: subspecific genetic lineage rank

characteristic: title


text: Max Planck Institute for Biology Tuebingen

text: public

text: thale cress

text: met1 mutant

text: Arabidopsis thaliana

text: Arabidopsis thaliana

text: Line 1


text: Royal Botanic Gardens Kew

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: ROYAL BOTANIC GARDENS KEW/NATURAL HISTORY MUSEUM

characteristic: barcoding center

text: COPO

characteristic: broker name

text: PENNY CULLINGTON

text: PRIVATE

characteristic: collecting institution

characteristic: collection date

text: United Kingdom

characteristic: geographic location (country and/or sea)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: England | Buckinghamshire | Bittams Wood | Dancersend

characteristic: geographic location (region and locality)

text: NOT PROVIDED

characteristic: habitat

text: PENNY CULLINGTON | KIERAN WOOF |  BRIAN DOUGLAS

text: PRIVATE | ROYAL BOTANIC GARDENS KEW

text: spore-bearing structure

characteristic: lifestage

text: Russula aff. farinipes

text: WHOLE ORGANISM

characteristic: organism part

text: DTOL

characteristic: project name

text: Russula aff. farinipes

text: SEXUAL MORPH

characteristic: sex

text: NOT PROVIDED

text: 0225be7c-6bb1-4cce-8f8d-eb5eea28f762-DTOL-specimen

characteristic: tolid

type: derived from


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-50994

tag: Namespace:Hospital General Universitario Gregorio Maranon

characteristic: Submitter Id

text: HGUGM

text: HGUGM

characteristic: collector name

text: Spain

text: Human

characteristic: host common name

text: not applicable

characteristic: host health state

text: Human

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


text: Hospital General Universitario Gregorio Maranon

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-50995

text: HGUGM

characteristic: collecting institution

text: HGUGM

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-50996

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable


characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-50997

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-50998

characteristic: Submitter Id

text: HGUGM

text: HGUGM

characteristic: collector name

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-50999

text: HGUGM

text: HGUGM

text: Spain

text: Human

characteristic: host common name

text: not applicable

characteristic: host health state

text: Human

characteristic: host scientific name

text: not applicable


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51000

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: host sex

characteristic: host subject id

characteristic: isolate


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51001

text: HGUGM

characteristic: collecting institution

text: HGUGM

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: organism


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51002

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51003

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable


text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51004

characteristic: Submitter Id

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51005

text: HGUGM

text: HGUGM

characteristic: collector name

text: Spain

text: Human

characteristic: host common name

text: not applicable

characteristic: host health state

text: Human

text: not applicable


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51006

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

characteristic: host scientific name

text: not applicable

characteristic: host sex

characteristic: host subject id


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51007

text: HGUGM

characteristic: collecting institution

text: HGUGM

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: isolate


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51008

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: organism


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:081-51009

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: title


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51010

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

text: Severe acute respiratory syndrome coronavirus 2


text: Hospital General Universitario Gregorio Maranon

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51011

characteristic: Submitter Id

text: HGUGM

text: HGUGM

characteristic: collector name

text: Spain

text: Human

characteristic: host common name

text: not applicable

text: Human

text: not applicable


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51012

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

characteristic: host health state

text: Human

characteristic: host scientific name

text: not applicable

characteristic: host sex


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51013

text: HGUGM

characteristic: collecting institution

text: HGUGM

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: host subject id


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51014

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: isolate


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51015

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: organism


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51016

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: title


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51017

characteristic: Submitter Id

text: HGUGM

text: HGUGM

characteristic: collector name

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51018

text: HGUGM

text: HGUGM

text: Spain

text: Human

characteristic: host common name

text: not applicable

characteristic: host health state

text: Human

characteristic: host scientific name

text: not applicable


text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51019

text: HGUGM

characteristic: collecting institution

text: HGUGM

text: Spain

characteristic: geographic location (country and/or sea)

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: host sex


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51020

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: host subject id


characteristic: External Id

characteristic: INSDC center name

text: public

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51021

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: isolate


characteristic: INSDC last update

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51022

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: organism


text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-27-03-2023-14:39:30:082-51023

characteristic: Submitter Id

text: HGUGM

text: HGUGM

text: Spain

text: Human

text: not applicable

text: Human

text: not applicable

characteristic: title


text: Klinikum rechts der Isar (TUM)

text: public

tag: Namespace:Klinikum rechts der Isar (TUM)

text: Murine pancreatic cancer cell line

characteristic: collection date

text: house mouse

characteristic: common name

text: CRISPR Cas9 control harvested 48 hours after seeding

characteristic: description

text: Germany

text: Mus musculus

text: Mus musculus


text: Klinikum rechts der Isar (TUM)

text: public

text: Murine pancreatic cancer cell line

text: house mouse

text: CRISPR Cas9 sgRNA1 targeting Prkaa1 harvested 48 hours after seeding

text: Germany

characteristic: geographic location (country and/or sea)

text: Mus musculus

text: Mus musculus


text: Klinikum rechts der Isar (TUM)

text: public

text: Murine pancreatic cancer cell line

text: house mouse

text: CRISPR Cas9 sgRNA2 targeting Prkaa1 harvested 48 hours after seeding

text: Germany

text: Mus musculus

text: Mus musculus


text: Klinikum rechts der Isar (TUM)

text: public

text: Murine pancreatic cancer cell line

text: house mouse

text: Constitutive PGK overexpression control vector harvested 48 hours after seeding

text: Germany

text: Mus musculus

text: Mus musculus


text: Klinikum rechts der Isar (TUM)

text: public

text: Murine pancreatic cancer cell line

text: house mouse

text: Constitutive PGK overexpression Prkaa1 vector harvested 48 hours after seeding

text: Germany

text: Mus musculus

text: Mus musculus


text: Institute of Oncology research (IOR)

text: public

text: shCtrl

characteristic: RNA interference

tag: Namespace:Institute of Oncology research (IOR)

text: ArrayExpress

characteristic: broker name

text: epithelial cell of prostate

text: not collected

text: human

text: Protocols: Experiment in KSF medium. Cells were plated in T-25 flasks at 70% confluence. After 72 h, cells were collected and lysed with 500 µl TRIzol Reagent (15596026, Thermo Fisher Scientific). Experiment in EGM2-medium. Cells were plated in T-25 flasks at 70% confluence with EGM2 medium. After 72 h, EGM2 growth medium was replenished with fresh medium and after 96h cells were collected and lysed with 500 µl TRIzol Reagent (15596026, Thermo Fisher Scientific). RNA was extracted using Direct-zol RNA MiniPrep kit (R2052, Zymo Research) following manufacture instructions. NEBNext Ultra Directional RNA Library Prep Kit for Illumina (New England BioLabs Inc.) was employed with the NEBNext Multiplex Oligos for Illumina (New England BioLabs Inc.) and NEBNext® Poly(A) mRNA Magnetic Isolation Module for cDNA synthesis with the addition of barcode sequences.

text: normal

characteristic: disease

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: prostate gland

characteristic: organism part

text: Homo sapiens

characteristic: stimulus


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Institute of Oncology research (IOR)

characteristic: INSDC center name

text: public

text: ArrayExpress

text: epithelial cell of prostate

text: not collected

text: human

text: normal

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: prostate gland

text: Homo sapiens


text: Institute of Oncology research (IOR)

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: shCtrl

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: epithelial cell of prostate

text: not collected

text: human

text: normal

text: wild type genotype

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: prostate gland

text: Homo sapiens

text: Ksf


text: Institute of Oncology research (IOR)

text: public

text: ArrayExpress

text: epithelial cell of prostate

text: not collected

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: normal

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: prostate gland

text: Homo sapiens

text: Ksf

characteristic: title


text: public

text: Fluconazole (0.5 �g/ml)

characteristic: Treatment

text: Candida albicans evolved 14d in Fluconazole

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: public

text: CX (96 �g/ml)

text: Candida albicans evolved 14d in polymer CX

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: public

text: Candida albicans evolved 14d without drug

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: public

text: Tunicamycin (2 �g/ml)

text: Candida albicans evolved 14d in tunicamycin

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: public

text: LP (192 �g/ml)

text: Candida albicans evolved 14d in polymer LB

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: public

text: LH (24 �g/ml)

text: Candida albicans evolved 14d in polymer LH (Replicate 1)

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: public

text: LH (24 �g/ml)

text: Candida albicans evolved 14d in polymer LH (Replicate 2)

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: public

text: LH (24 �g/ml)

text: Candida albicans evolved 14d in polymer LH (Replicate 13

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: public

text: Candida albicans wild type, parent for evolution experiment

text: Germany

text: Candida albicans SC5314

text: Candida albicans SC5314


text: Seoul National University

text: public

tag: Namespace:Seoul National University

text: A sample derived from a patient diagnosed with TB and part of the study for the creation of the Pan-Lineage Reference Genome.

text: Japan

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 594)


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Seoul National University

text: public

text: Japan

text: diseased

text: Homo sapiens

text: Sputum of a TB patient

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: GReAT Mycobacterium tuberculosis (JP 595)


characteristic: External Id

text: University of Exeter

characteristic: INSDC center name

text: public

tag: Namespace:University of Exeter

text: Ireland

text: Eunicella verrucosa

text: Eunicella verrucosa


text: Homo sapiens

characteristic: ArrayExpress-SPECIES

text: SC

text: public

text: not provided

text: human

text: not provided

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

text: erythroblast

text: not collected

text: human

text: Protocols: Human CD34+ cells were expanded and differentiated using the previously described 2-phase culture method. Cells were harvested by centrifugation (200 x g for 8 minutes), washed 2 times with PBS, counted with Countess cell counter (Thermo Fischer) and fixed for 5 minutes on a platform shaker with 1% fresh formaldehyde (Pierce 16% Formaldehyde Methanol Free, 28906) diluted in PBS. The fixation was quenched with 1:10 vol of 1.25 M glycine solution for 5 minutes with shaking. All the steps were carried out at room temperature unless specified. Cells were centrifuged at 600 x g for 5 minutes and washed with PBS twice. The cells were resuspended in PBS and transferred into a final volume of 500 L in 1.5 mL Eppendorf tubes pre-coated overnight with 1 % BSA. Aliquots of 2 million-, 500,000-, or 200,000-cells were used for WIZ, CTCF or histone PTM (posttranslational modification) profiling, respectively. Activated BioMag® Plus Concanavalin A magnetic beads (Bangs Laboratories, BP531) were added to the cells (40L per tube) to allow magnetic separation in the following steps and incubated for 10 minutes with gentle rotation. After magnetic separation cells were resuspended in 500L of Permeabilization Buffer (20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM Spermidine, 0.02 % Digitonin, 2 mM EDTA, 0.1 % NP40, 0.1 % Tween-20, cOmplete EDTA-free Protease Inhibitor Cocktail, 4693132001) and incubated for 7 minutes without shaking. Cells were washed with 1 mL of DIG-wash EDTA Buffer (20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM Spermidine, 0.02% Digitonin, 2 mM EDTA, cOmplete EDTA-free Protease Inhibitor Cocktail) and incubated in 200L of DIG-wash EDTA Buffer with the primary antibody for 2 hours with gentle rotation. Primary antibodies used were rabbit polyclonal WIZ (Novus Biologicals, NBP1-80586, lot A96963), rabbit polyclonal CTCF (Millipore, 07-729, lot 3059608), rabbit polyclonal H3K9ac (Active Motif, 39917, lot 12517005) or mouse monoclonal H3K9me2 (Millipore, 05-1249, clone CMA307, lot 3385820). Cells were washed twice with 1 mL of DIG-wash EDTA buffer and incubated for 1 hour at 4°C with gentle rotation in 200L of DIG-wash EDTA Buffer with CUTANA pAG-MNase (protein A- protein G-Micrococcal Nuclease fusion, Epicypher, 15-1016). Subsequently, the cells were washed once with 1 mL of DIG-wash EDTA Buffer and once with 1 mL of DIG-wash Buffer without EDTA. For the pAG-MNase digestion, the cells were re-suspended in 100 L of DIG-wash Buffer without EDTA, then CaCl2 was added to a final concentration of 2 mM to activate the MNase. Samples were incubated for 30 minutes at 0 °C in an aluminum block. To stop the digestion, 100L of 2X Stop Buffer (400 mM NaCl, 20 mM EDTA, 4 mM EGTA, 0.02 % Digitonin, 100 g/mL RNase A, 50g/mL Glycogen, 4 pg/mL Drosophila melanogaster DNA) were added. Samples were incubated for 30 minutes at 37 °C without shaking. Supernatants were collected and treated with SDS (1% final concentration) and 200g/mL Proteinase K for minimum 4 hours at 65°C. DNA was extracted by phenol-chloroform for WIZ and CTCF profiling to keep the small DNA fragments and with the DNA Clean & Concentrator-5 kit (Zymo Research, D4004) for histone PTMs profiling. The NEB adaptor was diluted at 1:15 to avoid excessive adaptor dimer formation. The NEBNext Multiplex Oligos for Illumina SET2 (New England Biolabs, E7500L) was used for the indexing. The PCR reaction was adapted for each target: 8 and 9 cycles and annealing / extension for 10 seconds at 65 °C for WIZ and CTCF, respectively; 9 cycles and annealing / extension for 30 seconds at 65 °C for histone PTMs. Libraries were purified using Agencourt AMPure XP beads (Beckman Coulter, A63881) and the concentrations and profiles were checked on TapeStation with a D1000 Screen Tape.

characteristic: developmental stage

text: compound

characteristic: experiment type

text: not collected

text: CD34+ HSPC

characteristic: immunophenotype

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

characteristic: protocol

characteristic: replicate

text: Homo sapiens

text: DMSO

characteristic: stimulus


text: Novartis Biomedical Research

text: public

characteristic: SRA accession

text: E-MTAB-13890:CUTNRUN-H3K9ac_t4_dWIZ-1_R1

characteristic: Submitter Id

text: ArrayExpress

text: erythroblast

text: not collected

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: compound

text: not collected

characteristic: geographic location (country and/or sea)

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Novartis Biomedical Research

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-13890:CUTNRUN-H3K9ac_t4_dWIZ-1_R2

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: compound

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9ac_t4_dWIZ-1_R3

text: ArrayExpress

characteristic: broker name

text: erythroblast

text: not collected

text: human

characteristic: developmental stage

text: compound

characteristic: experiment type

text: not collected

text: CD34+ HSPC

characteristic: immunophenotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9ac_t4_UNC0642_R1

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: compound

text: not collected

text: CD34+ HSPC

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

characteristic: protocol

characteristic: replicate

text: Homo sapiens

characteristic: stimulus


text: Novartis Biomedical Research

text: public

characteristic: SRA accession

text: E-MTAB-13890:CUTNRUN-H3K9ac_t4_UNC0642_R2

characteristic: Submitter Id

text: ArrayExpress

text: erythroblast

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: compound

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9ac_t4_UNC0642_R3

text: ArrayExpress

text: erythroblast

text: not collected

text: human

characteristic: description

text: compound

text: not collected

characteristic: geographic location (country and/or sea)

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Novartis Biomedical Research

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_ctrl-nt_R1

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: CRISPR

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: ctrl-nt


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_ctrl-nt_R2

text: ArrayExpress

characteristic: broker name

text: erythroblast

text: not collected

text: human

characteristic: developmental stage

text: CRISPR

characteristic: experiment type

text: not collected

text: CD34+ HSPC

characteristic: immunophenotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens

text: ctrl-nt


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_ctrl-nt_R3

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: CRISPR

text: not collected

text: CD34+ HSPC

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

characteristic: protocol

characteristic: replicate

text: Homo sapiens

text: ctrl-nt

characteristic: stimulus


text: Novartis Biomedical Research

text: public

characteristic: SRA accession

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_dWIZ-1_R1

characteristic: Submitter Id

text: ArrayExpress

text: erythroblast

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: compound

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_dWIZ-1_R2

text: ArrayExpress

text: erythroblast

text: not collected

text: human

characteristic: description

text: compound

text: not collected

characteristic: geographic location (country and/or sea)

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Novartis Biomedical Research

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_dWIZ-1_R3

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: compound

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_UNC0642_R1

text: ArrayExpress

characteristic: broker name

text: erythroblast

text: not collected

text: human

characteristic: developmental stage

text: compound

characteristic: experiment type

text: not collected

text: CD34+ HSPC

characteristic: immunophenotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_UNC0642_R2

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: compound

text: not collected

text: CD34+ HSPC

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

characteristic: protocol

characteristic: replicate

text: Homo sapiens

characteristic: stimulus


text: Novartis Biomedical Research

text: public

characteristic: SRA accession

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_UNC0642_R3

characteristic: Submitter Id

text: ArrayExpress

text: erythroblast

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: compound

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_WIZ-g18_R1

text: ArrayExpress

text: erythroblast

text: not collected

text: human

characteristic: description

text: CRISPR

text: not collected

characteristic: geographic location (country and/or sea)

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Novartis Biomedical Research

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_WIZ-g18_R2

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: Protocols: Human CD34+ cells were expanded and differentiated using the previously described 2-phase culture method. Cells were harvested by centrifugation (200 x g for 8 minutes), washed 2 times with PBS, counted with Countess cell counter (Thermo Fischer) and fixed for 5 minutes on a platform shaker with 1% fresh formaldehyde (Pierce 16% Formaldehyde Methanol Free, 28906) diluted in PBS. The fixation was quenched with 1:10 vol of 1.25 M glycine solution for 5 minutes with shaking. All the steps were carried out at room temperature unless specified. Cells were centrifuged at 600 x g for 5 minutes and washed with PBS twice. The cells were resuspended in PBS and transferred into a final volume of 500 L in 1.5 mL Eppendorf tubes pre-coated overnight with 1 % BSA. Aliquots of 2 million-, 500,000-, or 200,000-cells were used for WIZ, CTCF or histone PTM (posttranslational modification) profiling, respectively. Activated BioMag® Plus Concanavalin A magnetic beads (Bangs Laboratories, BP531) were added to the cells (40L per tube) to allow magnetic separation in the following steps and incubated for 10 minutes with gentle rotation. After magnetic separation cells were resuspended in 500L of Permeabilization Buffer (20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM Spermidine, 0.02 % Digitonin, 2 mM EDTA, 0.1 % NP40, 0.1 % Tween-20, cOmplete EDTA-free Protease Inhibitor Cocktail, 4693132001) and incubated for 7 minutes without shaking. Cells were washed with 1 mL of DIG-wash EDTA Buffer (20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM Spermidine, 0.02% Digitonin, 2 mM EDTA, cOmplete EDTA-free Protease Inhibitor Cocktail) and incubated in 200L of DIG-wash EDTA Buffer with the primary antibody for 2 hours with gentle rotation. Primary antibodies used were rabbit polyclonal WIZ (Novus Biologicals, NBP1-80586, lot A96963), rabbit polyclonal CTCF (Millipore, 07-729, lot 3059608), rabbit polyclonal H3K9ac (Active Motif, 39917, lot 12517005) or mouse monoclonal H3K9me2 (Millipore, 05-1249, clone CMA307, lot 3385820). Cells were washed twice with 1 mL of DIG-wash EDTA buffer and incubated for 1 hour at 4°C with gentle rotation in 200L of DIG-wash EDTA Buffer with CUTANA pAG-MNase (protein A- protein G-Micrococcal Nuclease fusion, Epicypher, 15-1016). Subsequently, the cells were washed once with 1 mL of DIG-wash EDTA Buffer and once with 1 mL of DIG-wash Buffer without EDTA. For the pAG-MNase digestion, the cells were re-suspended in 100 L of DIG-wash Buffer without EDTA, then CaCl2 was added to a final concentration of 2 mM to activate the MNase. Samples were incubated for 30 minutes at 0 °C in an aluminum block. To stop the digestion, 100L of 2X Stop Buffer (400 mM NaCl, 20 mM EDTA, 4 mM EGTA, 0.02 % Digitonin, 100 g/mL RNase A, 50g/mL Glycogen, 4 pg/mL Drosophila melanogaster DNA) were added. Samples were incubated for 30 minutes at 37 °C without shaking. Supernatants were collected and treated with SDS (1% final concentration) and 200g/mL Proteinase K for minimum 4 hours at 65°C. DNA was extracted by phenol-chloroform for WIZ and CTCF profiling to keep the small DNA fragments and with the DNA Clean & Concentrator-5 kit (Zymo Research, D4004) for histone PTMs profiling. The NEB adaptor was diluted at 1:15 to avoid excessive adaptor dimer formation. The NEBNext Multiplex Oligos for Illumina SET2 (New England Biolabs, E7500L) was used for the indexing. The PCR reaction was adapted for each target: 8 and 9 cycles and annealing / extension for 10 seconds at 65 °C for WIZ and CTCF, respectively; 9 cycles and annealing / extension for 30 seconds at 65 °C for histone PTMs. Libraries were purified using Agencourt AMPure XP beads (Beckman Coulter, A63881) and the concentrations and profiles were checked on TapeStation with a D1000 Screen Tape.

text: CRISPR

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_WIZ-g18_R3

text: ArrayExpress

characteristic: broker name

text: erythroblast

text: not collected

text: human

characteristic: developmental stage

text: CRISPR

characteristic: experiment type

text: not collected

text: CD34+ HSPC

characteristic: immunophenotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_WIZ-g6_R1

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: CRISPR

text: not collected

text: CD34+ HSPC

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

characteristic: protocol

characteristic: replicate

text: Homo sapiens

characteristic: stimulus


text: Novartis Biomedical Research

text: public

characteristic: SRA accession

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_WIZ-g6_R2

characteristic: Submitter Id

text: ArrayExpress

text: erythroblast

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: CRISPR

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Homo sapiens


text: Novartis Biomedical Research

text: public

text: E-MTAB-13890:CUTNRUN-H3K9me2_t4_WIZ-g6_R3

text: ArrayExpress

text: erythroblast

text: not collected

text: human

characteristic: description

text: CRISPR

text: not collected

characteristic: geographic location (country and/or sea)

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Homo sapiens

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Novartis Biomedical Research

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ArrayExpress

text: erythroblast

text: not collected

text: human

text: CRISPR

text: not collected

text: CD34+ HSPC

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: CUTNRUN-IgG

text: Homo sapiens

text: ctrl-nt


text: Novartis Biomedical Research

text: public

text: ArrayExpress

characteristic: broker name

text: erythroblast

text: not collected

text: human

characteristic: developmental stage

text: compound

characteristic: experiment type

text: not collected

text: CD34+ HSPC

characteristic: immunophenotype

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: CUTNRUN-IgG

text: Homo sapiens

text: DMSO


text: Dipartimento di Medicina Molecolare e Biotecnologie Mediche (DMMBM), Università Federico II di Napoli, CEINGE Biotecnologie Avanzate Franco Salvatore

text: public

text: ArrayExpress

text: epithelial-like cell from human kidney

text: not collected

text: human

text: Protocols: HEK-293T cells were treated with a nutraceutical formula containing propolis, Verbascum, thymus, long chain length polyphosphates, potassium sorbate and sodium benzoate (solution-3) at 0.01x concentration or with vehicle (saline solution) as the negative control for the treatment. After 24 hours, the cells were lysed with TRIzol RNA Isolation Reagent (1 ml, #15596018; Ambion, Thermo Fisher Scientific) and frozen at -80°C. HEK-293T cells were grown in a humidified 37°C incubator with 5% CO2. The cells were cultured in feeder-free conditions using Dulbecco’s modified Eagle’s medium (41966-029; Gibco) with 10% fetal bovine serum (10270-106; Gibco), 2 mM L-glutamine (25030-024; Gibco), and 1% penicil-lin/streptomycin (P0781; Sigma-Aldrich), with medium changed daily. Cells were dissociated with Trypsin-EDTA solution (T4049, Sigma-Aldrich) when the culture reached ~80% confluency. HEK-293T cells were plated (1000000 cells) and treated with a nutraceutical formula containing propolis, Verbascum, thymus, long chain length polyphosphates, potassium sorbate and sodium benzoate (solution-3) at 0.01x concentration or with vehicle (saline solution) as the negative control for the treatment. After 24 hours, the cells were lysed, and their RNA were extracted. Total RNA, isolated from HEK-293T cells by using TRIzol RNA Isolation Reagent (#15596018; Ambion, Thermo Fisher Scientific) was quantified in a NanoDrop™ One/OneC Microvolume UV-Vis Spectrophotometer (Thermo Scientific™), checked for purity and integrity. Libraries were prepared using the TruSeq® Stranded mRNA Library Kit according to the protocols recommended by the manufacturer. Library kit: TruSeq® Stranded mRNA

text: Unknown

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: kidney

characteristic: organism part

text: Nutraceutical mixture-treated (Solution-3); Case

characteristic: response to treatment

text: Homo sapiens

text: Treatment

characteristic: treatment


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: epithelial-like cell from human kidney

text: not collected

characteristic: collection date

text: human

characteristic: common name

characteristic: description

text: Unknown

text: wild type genotype

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: kidney

text: Vehicle-treated (Saline Solution); Control

text: Homo sapiens

text: Control


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Dipartimento di Medicina Molecolare e Biotecnologie Mediche (DMMBM); CEINGE Biotecnologie Avanzate Franco Salvatore.

text: public

text: ArrayExpress

text: epithelial cells isolated from colon tissue (colorectal adenocarcinoma)

text: not collected

text: human

text: Protocols: Caco-2 cells (ATCC, Middlesex, UK; accession number: HTB-37 L) were plated (500000 cells) and treated with a nutraceutical formula containing propolis, verbascum, thymus, long chain length polyphosphates, potassium sorbate and sodium benzoate (solution-3) at 0.01x concentration or with vehicle (saline solution) as the negative control for the treatment. After 1 hour, the treated cells were infected with SARS-CoV-2 viral particles EG.5 (MOI, 3). After 48 hours, the infected cells were were lysed with TRIzol RNA Isolation Reagent (0.5 ml, #15596018; Ambion, Thermo Fisher Scientific) and frozen at -80°C. Caco-2 (ATCC, Middlesex, UK; accession number: HTB-37 L) cells were grown in a humidified 37°C incubator with 5% CO2. The cells were cultured in feeder-free conditions using Dulbecco’s modified Eagle’s medium (41966-029; Gibco) with 10% fetal bovine serum (10270-106; Gibco), 2 mM L-glutamine (25030-024; Gibco), and 1% penicil-lin/streptomycin (P0781; Sigma-Aldrich), with medium changed daily. Cells were dis-sociated with Trypsin-EDTA solution (T4049, Sigma-Aldrich) when the culture reached ~80% confluency. Caco-2 cells (ATCC, Middlesex, UK; accession number: HTB-37 L) were plated (500000 cells) and treated with a nutraceutical formula containing propolis, verbascum, thymus, long chain length polyphosphates, potassium sorbate and sodium benzoate (solution-3) at 0.01x concentration or with vehicle (saline solution) as the negative control for the treatment. After 1 hour, the treated cells were infected with SARS-CoV-2 viral particles EG.5 (MOI, 3). After 48 hours, the infected cells were were lysed, and their RNA were extracted. Total RNA, isolated from Caco-2 cells by using TRIzol RNA Isolation Reagent (#15596018; Ambion, Thermo Fisher Scientific) was quantified in a NanoDrop™ One/OneC Microvolume UV-Vis Spectrophotometer (Thermo Scientific™), checked for purity and integrity. Libraries were prepared using the TruSeq® Stranded mRNA Library Kit according to the protocols recommended by the manufacturer. Library kit: TruSeq® Stranded mRNA

text: Unknown

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: colorectal adenocarcinoma

text: SARS-CoV-2-(E.G.5)-infected Caco-2 cells pre-treated with  a nutraceutical mixture containing propolis, Verbascum, thymus, long chain length polyphosphates, potassium sorbate and sodium benzoate (Solution-3) - Case

text: Homo sapiens

characteristic: title

text: TREATMENT


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ArrayExpress

characteristic: broker name

text: not collected

text: human

text: Unknown

characteristic: developmental stage

text: wild type genotype

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: colorectal adenocarcinoma

text: SARS-CoV-2-(E.G.5)-infected Caco-2 cells pre-treated with Vehicle (saline solution) - Control

text: Homo sapiens

text: CONTROL


text: Biological Engineering

text: public

text: Donor A - time zero

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: Donor B - time zero

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: Donor C - time zero

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: Donor D - time zero

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: Donor E - time zero

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor A - treatment with fructooligosaccharides prebiotic - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor A - treatment with pine skin - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor A - treatment with low weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor A - treatment with high weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor B - treatment with fructooligosaccharides prebiotic - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor B - treatment with pine skin - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor B - treatment with low weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor B - treatment with high weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor C - treatment with fructooligosaccharides prebiotic - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor C - treatment with pine skin - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor C - treatment with low weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor C - treatment with high weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor D - treatment with fructooligosaccharides prebiotic - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor D - treatment with pine skin - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor D - treatment with low weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor D - treatment with high weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor E - treatment with fructooligosaccharides prebiotic - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor E - treatment with pine skin - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor E - treatment with low weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Biological Engineering

text: public

text: donor E - treatment with high weight carbohydrates - 24h

text: Portugal

text: human gut metagenome

text: human gut metagenome


text: Klinikum rechts der Isar (TUM)

text: public

text: Murine pancreatic cancer cell line

text: house mouse

text: harvested 24 hours after control treatment

text: Germany

text: Mus musculus

text: Mus musculus


text: Klinikum rechts der Isar (TUM)

text: public

text: Murine pancreatic cancer cell line

text: house mouse

text: harvested 24 hours after PF-3758309 treatment

text: Germany

text: Mus musculus

text: Mus musculus


text: universita degli studi di verona

text: public

text: not collected

text: human

text: Human bronchial immortalized cell lines IB3-1, which is deficient for CFTR (F508del/W1282X, IB3-1-CFTR-/-)

text: Italy

text: Homo sapiens

text: Homo sapiens


text: universita degli studi di verona

text: public

text: not collected

text: human

text: Human bronchial immortalized cell lines , which has a corrected CFTR (C38-CFTR+/+)

text: Italy

text: Homo sapiens

text: Homo sapiens


text: ZOE

text: public

text: Stool sample from the ZOE PREDICT3 study (US 2021)

text: USA

text: human gut metagenome

text: human gut metagenome


text: University of Exeter

text: public

text: France

text: Eunicella verrucosa

text: Eunicella verrucosa


text: Ifremer

text: public

text: SeBiMER

text: IFREMER

characteristic: collecting institution

text: not provided

text: blank sample

text: not provided

characteristic: environment (biome)

text: not provided

characteristic: environment (feature)

text: not provided

characteristic: environment (material)

text: No

text: not provided

text: not provided

characteristic: geographic location (depth)

text: not provided

characteristic: geographic location (latitude)

text: not provided

characteristic: geographic location (longitude)

text: not provided

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: blank

text: blank sample

text: ECOMINE

characteristic: project name

text: Exctraction blank

text: blank sample

text: 18S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Ifremer

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

text: IFREMER

text: not provided

characteristic: collection date

text: blank sample

characteristic: common name

text: not provided

text: not provided

text: not provided

text: No

text: not provided

characteristic: geographic location (country and/or sea)

text: not provided

text: not provided

text: not provided

text: not provided

text: eukaryote

text: blank

text: blank sample

characteristic: organism

text: ECOMINE

text: PCR blank

text: blank sample

text: 18S rRNA

characteristic: title


text: Ifremer

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: SeBiMER

characteristic: broker name

text: IFREMER

characteristic: collecting institution

text: sediment metagenome

text: lagoon

characteristic: environment (biome)

text: estuary

characteristic: environment (feature)

text: shallow marine sediment

characteristic: environment (material)

text: Yes

text: New Caledonia

unit: m

characteristic: geographic location (depth)

text: Coulee

text: eukaryote

text: Surface sediment of New Caledonia coastal areas

text: sediment metagenome

text: ECOMINE

text: Benthic protist in Coulee site

text: sediment metagenome

text: 18S rRNA


characteristic: ENA first public

text: Ifremer

text: public

text: SeBiMER

text: IFREMER

text: sediment metagenome

text: lagoon

text: estuary

text: shallow marine sediment

text: Yes

text: New Caledonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dumbea

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

text: ECOMINE

characteristic: project name

text: Benthic protist in Dumbea site

text: sediment metagenome

text: 18S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

text: Ifremer

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: SeBiMER

text: IFREMER

characteristic: collection date

text: sediment metagenome

characteristic: common name

text: lagoon

text: estuary

text: shallow marine sediment

text: Yes

text: New Caledonia

characteristic: geographic location (country and/or sea)

text: Ouegoa

text: eukaryote

text: sediment metagenome

characteristic: organism

text: ECOMINE

text: Benthic protist in Ouegoa site

text: sediment metagenome

text: 18S rRNA

characteristic: title


text: Ifremer

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: SeBiMER

characteristic: broker name

text: IFREMER

characteristic: collecting institution

text: sediment metagenome

text: lagoon

characteristic: environment (biome)

text: estuary

characteristic: environment (feature)

text: shallow marine sediment

characteristic: environment (material)

text: Yes

text: New Caledonia

characteristic: geographic location (depth)

text: Pirogues

text: eukaryote

text: sediment metagenome

text: ECOMINE

text: Benthic protist in Pirogues site

text: sediment metagenome

text: 18S rRNA


characteristic: ENA first public

text: Ifremer

text: public

text: SeBiMER

text: IFREMER

text: sediment metagenome

text: lagoon

text: estuary

text: shallow marine sediment

text: Yes

text: New Caledonia

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Vavouto

characteristic: geographic location (region and locality)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

text: ECOMINE

characteristic: project name

text: Benthic protist in Vavouto site

text: sediment metagenome

text: 18S rRNA

characteristic: target gene

characteristic: target subfragment


characteristic: ENA-CHECKLIST

text: HPC

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:036-17205

characteristic: Submitter Id

characteristic: altitude

text: urban environment

characteristic: broad-scale environmental context

characteristic: collection date

text: air samples

characteristic: description

text: air

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: Roadside

characteristic: local environmental context

text: air metagenome

characteristic: organism

text: Air monitoring by nanopore sequencing

text: air metagenome

characteristic: title


characteristic: ENA first public

text: HPC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:036-17206

text: urban environment

text: air samples

text: air

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


characteristic: ENA-CHECKLIST

text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17207

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

characteristic: project name

text: air metagenome


text: HPC

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17208

characteristic: Submitter Id

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17209

characteristic: altitude

text: urban environment

characteristic: broad-scale environmental context

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17210

text: urban environment

characteristic: collection date

text: air samples

characteristic: description

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17211

text: urban environment

text: air samples

text: air

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17212

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

characteristic: local environmental context

text: air metagenome

characteristic: organism

text: Air monitoring by nanopore sequencing

text: air metagenome


characteristic: ENA first public

text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17213

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome

characteristic: title


text: HPC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17214

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17215

text: urban environment

text: air samples

text: air

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


characteristic: ENA-CHECKLIST

text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17216

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

characteristic: project name

text: air metagenome


text: HPC

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17217

characteristic: Submitter Id

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17218

characteristic: altitude

text: urban environment

characteristic: broad-scale environmental context

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17219

text: urban environment

characteristic: collection date

text: air samples

characteristic: description

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:037-17220

text: urban environment

text: air samples

text: air

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17221

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

characteristic: local environmental context

text: air metagenome

characteristic: organism

text: Air monitoring by nanopore sequencing

text: air metagenome


characteristic: ENA first public

text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17222

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome

characteristic: title


text: HPC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17223

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17224

text: urban environment

text: air samples

text: air

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


characteristic: ENA-CHECKLIST

text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17225

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

characteristic: project name

text: air metagenome


text: HPC

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17226

characteristic: Submitter Id

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17227

characteristic: altitude

text: urban environment

characteristic: broad-scale environmental context

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17228

text: urban environment

characteristic: collection date

text: air samples

characteristic: description

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17229

text: urban environment

text: air samples

text: air

characteristic: environmental medium

text: Spain

characteristic: geographic location (country and/or sea)

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17230

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

characteristic: local environmental context

text: air metagenome

characteristic: organism

text: Air monitoring by nanopore sequencing

text: air metagenome


characteristic: ENA first public

text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17231

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome

characteristic: title


text: HPC

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17232

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17233

text: urban environment

text: air samples

text: air

text: Spain

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


characteristic: ENA-CHECKLIST

text: HPC

text: public

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:038-17234

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

characteristic: project name

text: air metagenome


text: HPC

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-17-06-2024-08:07:54:039-17235

characteristic: Submitter Id

text: urban environment

text: air samples

text: air

text: Spain

text: Roadside

text: air metagenome

text: Air monitoring by nanopore sequencing

text: air metagenome


text: GuillaumeLabUH

text: public

text: red flour beetle

characteristic: common name

text: females, whole body

text: Switzerland

text: Tribolium castaneum

text: Tribolium castaneum


text: Institut de recherche experimentale et clinique - IREC

text: public

characteristic: collection date

text: Clinical isolate CTMA_1919

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1919


text: public

text: Clinical isolate CTMA_1920

characteristic: description

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1920


text: public

text: Clinical isolate CTMA_1922

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1922


text: public

text: Clinical isolate CTMA_1923

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1923


text: public

text: Clinical isolate CTMA_1925

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1925


text: public

text: Clinical isolate CTMA_1926

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1926


text: public

text: Clinical isolate CTMA_1928

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1928


text: public

text: Clinical isolate CTMA_1930

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1930


text: public

text: Clinical isolate CTMA_1931

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1931


text: public

text: Clinical isolate CTMA_1932

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1932


text: public

text: Clinical isolate CTMA_1933

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1933


text: public

text: Clinical isolate CTMA_1934

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1934


text: public

text: Clinical isolate CTMA_1935

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1935


text: public

text: Clinical isolate CTMA_1936

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1936


text: public

text: Clinical isolate CTMA_1937

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1937


text: public

text: Clinical isolate CTMA_1938

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1938


text: public

text: Clinical isolate CTMA_1939

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1939


text: public

text: Clinical isolate CTMA_1940

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1940


text: public

text: Clinical isolate CTMA_1941

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1941


text: public

text: Clinical isolate CTMA_1942

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1942


text: public

text: Clinical isolate CTMA_1943

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1943


text: public

text: Clinical isolate CTMA_1944

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1944


text: public

text: Clinical isolate CTMA_1946

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1946


text: public

text: Clinical isolate CTMA_1947

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1947


text: public

text: Clinical isolate CTMA_1948

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1948


text: public

text: Clinical isolate CTMA_1949

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1949


text: public

text: Clinical isolate CTMA_1952

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1952


text: public

text: Clinical isolate CTMA_1953

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1953


text: public

text: Clinical isolate CTMA_1954

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1954


text: public

text: Clinical isolate CTMA_1955

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1955


text: public

text: Clinical isolate CTMA_1956

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1956


text: public

text: Clinical isolate CTMA_1957

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1957


text: public

text: Clinical isolate CTMA_1958

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1958


text: public

text: Clinical isolate CTMA_1959

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1959


text: public

text: Clinical isolate CTMA_1960

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1960


text: public

text: Clinical isolate CTMA_1961

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1961


text: public

text: Clinical isolate CTMA_1962

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1962


text: public

text: Clinical isolate CTMA_1963

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1963


text: public

text: Clinical isolate CTMA_1964

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1964


text: public

text: Clinical isolate CTMA_1965

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1965


text: public

text: Clinical isolate CTMA_1966

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1966


text: public

text: Clinical isolate CTMA_1967

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1967


text: public

text: Clinical isolate CTMA_1968

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1968


text: public

text: Clinical isolate CTMA_1969

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1969


text: public

text: Clinical isolate CTMA_1970

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1970


text: public

text: Clinical isolate CTMA_1971

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1971


text: public

text: Clinical isolate CTMA_1972

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1972


text: public

text: Clinical isolate CTMA_1973

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1973


text: public

text: Clinical isolate CTMA_1974

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1974


text: public

text: Clinical isolate CTMA_1975

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1975


text: public

text: Clinical isolate CTMA_1977

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1977


text: public

text: Clinical isolate CTMA_1978

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1978


text: public

text: Clinical isolate CTMA_1980

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1980


text: public

text: Clinical isolate CTMA_1981

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1981


text: public

text: Clinical isolate CTMA_1982

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1982


text: public

text: Clinical isolate CTMA_1983

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1983


text: public

text: Clinical isolate CTMA_1984

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1984


text: public

text: Clinical isolate CTMA_1990

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1990


text: public

text: Clinical isolate CTMA_1991

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1991


text: public

text: Clinical isolate CTMA_1994

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1994


text: public

text: Clinical isolate CTMA_1995

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1995


text: public

text: Clinical isolate CTMA_1996

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1996


text: public

text: Clinical isolate CTMA_1997

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1997


text: public

text: Clinical isolate CTMA_1998

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1998


text: public

text: Clinical isolate CTMA_1999

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_1999


text: public

text: Clinical isolate CTMA_2000

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2000


text: public

text: Clinical isolate CTMA_2001

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2001


text: public

text: Clinical isolate CTMA_2002

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2002


text: public

text: Clinical isolate CTMA_2003

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2003


text: public

text: Clinical isolate CTMA_2004

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2004


text: public

text: Clinical isolate CTMA_2005

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2005


text: public

text: Clinical isolate CTMA_2007

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2007


text: public

text: Clinical isolate CTMA_2008

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2008


text: public

text: Clinical isolate CTMA_2009

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2009


text: public

text: Clinical isolate CTMA_2010

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2010


text: public

text: Clinical isolate CTMA_2011

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2011


text: public

text: Clinical isolate CTMA_2012

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2012


text: public

text: Clinical isolate CTMA_2013

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2013


text: public

text: Clinical isolate CTMA_2014

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2014


text: public

text: Clinical isolate CTMA_2015

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2015


text: public

text: Clinical isolate CTMA_2016

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2016


text: public

text: Clinical isolate CTMA_2017

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2017


text: public

text: Clinical isolate CTMA_2018

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2018


text: public

text: Clinical isolate CTMA_2019

text: Democratic Republic of the Congo

text: Vibrio cholerae

text: Vibrio cholerae

text: Clinical isolate CTMA_2019


text: University of Jyvaskyla

text: public

text: inoculated with Fomitopsis rosea (taxid 34475)

characteristic: biotic regimen

text: subpolar coniferous forest biome [ENVO:01000250]

characteristic: broad-scale environmental context

text: Kesijarvi log 001 year 2020

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 2

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

text: ITS3:GCATCGATGAAGAACGCAGC;ITS4:TCCTCCGCTTATTGATATGCT

characteristic: pcr primers

text: The role of stochasticity in fungal community assembly – explaining apparent stochasticity by field experiments

text: wood decay metagenome

text: nuclear ribosomal internal transcribed spacer

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 001 year 2020


characteristic: ENA first public

text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Kesijarvi log 002 year 2020

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 2

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 002 year 2020

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 002 year 2021

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 002 year 2021


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: uninoculated

text: Kesijarvi log 003 year 2019

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 003 year 2019


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Kesijarvi log 003 year 2020

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1 or 2

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 003 year 2020

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 003 year 2021

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 003 year 2021


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: Kesijarvi log 004 year 2020

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1 or 2

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 004 year 2020


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: uninoculated

text: Kesijarvi log 005 year 2019

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 005 year 2019

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 005 year 2020

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1 or 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 005 year 2020


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: uninoculated

text: Kesijarvi log 006 year 2019

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 006 year 2019


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Kesijarvi log 006 year 2020

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1 or 2

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 006 year 2020

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: uninoculated

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 007 year 2020

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1 or 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 007 year 2020


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: uninoculated

text: Kesijarvi log 007 year 2021

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 2

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 007 year 2021


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Kesijarvi log 008 year 2020

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1 or 2

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 008 year 2020

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 008 year 2021

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 2

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 008 year 2021


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: Kesijarvi log 009 year 2020

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 009 year 2020


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: uninoculated

text: Kesijarvi log 010 year 2021

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 010 year 2021

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 011 year 2020

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 011 year 2020


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: Kesijarvi log 011 year 2021

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 011 year 2021


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: uninoculated

text: Kesijarvi log 012 year 2019

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 012 year 2019

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 012 year 2021

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 012 year 2021


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: Kesijarvi log 013 year 2020

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 013 year 2020


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Kesijarvi log 013 year 2021

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 013 year 2021

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: uninoculated

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 014 year 2020

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 014 year 2020


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: uninoculated

text: Kesijarvi log 014 year 2021

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 014 year 2021


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: uninoculated

text: Kesijarvi log 015 year 2019

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 015 year 2019

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 015 year 2021

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 015 year 2021


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: Kesijarvi log 016 year 2020

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 016 year 2020


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: uninoculated

text: Kesijarvi log 018 year 2019

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 018 year 2019

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 018 year 2020

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 018 year 2020


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: Kesijarvi log 019 year 2020

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 019 year 2020


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Kesijarvi log 019 year 2021

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 019 year 2021

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: uninoculated

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 020 year 2019

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 020 year 2019


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: Kesijarvi log 020 year 2020

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 020 year 2020


text: University of Jyvaskyla

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Kesijarvi log 020 year 2021

text: wood [ENVO:00002040]

text: Finland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

characteristic: local environmental context

text: wood decay metagenome

characteristic: organism

text: wood decay metagenome

text: Kesijarvi log 020 year 2021

characteristic: title


characteristic: ENA-CHECKLIST

text: University of Jyvaskyla

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: biotic regimen

characteristic: broad-scale environmental context

characteristic: collection date

text: Kesijarvi log 021 year 2020

characteristic: description

text: wood [ENVO:00002040]

text: Finland

text: Decay stage 1

text: Picea abies

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: project name

text: wood decay metagenome

text: Kesijarvi log 021 year 2020


characteristic: ENA first public

text: University of Jyvaskyla

text: public

text: Kesijarvi log 021 year 2021

text: wood [ENVO:00002040]

characteristic: environmental medium

text: Finland

text: Decay stage 1

characteristic: host life stage

text: Picea abies

characteristic: host scientific name

characteristic: host taxid

text: forest floor [ENVO:01001582]

text: wood decay metagenome

characteristic: pcr primers

text: wood decay metagenome

characteristic: target gene

characteristic: target subfragment

text: Kesijarvi log 021 year 2021