status: PUBLIC

text: Nector americanus

tag: attribute

characteristic: ArrayExpress-SPECIES

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: SC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Nector americanus

characteristic: common name

text: Necator americanus

characteristic: organism

text: Necator americanus

characteristic: title


text: WEIZMANN INSTITUE OF SCIENCE

text: public

tag: Namespace:WEIZMANN INSTITUE OF SCIENCE

text: house mouse

text: mouse melanoma B2905 parental sample

characteristic: description

text: Mus musculus

text: Mus musculus

text: B2905 parental PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: house mouse

text: mouse melanoma B2905 parental sample

text: Mus musculus

text: Mus musculus

text: B2905 parental PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: human melanoma 83T cell line

text: Homo sapiens

text: Homo sapiens

text: 83T cell line PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: human melanoma 83T cell line

text: Homo sapiens

text: Homo sapiens

text: 83T cell line PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: breast cancer cell line from SRR12060769

text: Homo sapiens

text: Homo sapiens

text: MCF7 cell line PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 42

text: Homo sapiens

text: Homo sapiens

text: 42RF tumor PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 42

text: Homo sapiens

text: Homo sapiens

text: 42RF tumor PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 42

text: Homo sapiens

text: Homo sapiens

text: 42RS tumor PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 42

text: Homo sapiens

text: Homo sapiens

text: 42RS tumor PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 51

text: Homo sapiens

text: Homo sapiens

text: 51AL tumor PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 51

text: Homo sapiens

text: Homo sapiens

text: 51AL tumor PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 55

text: Homo sapiens

text: Homo sapiens

text: 55B3 tumor PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 55

text: Homo sapiens

text: Homo sapiens

text: 55B3 tumor PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 51

text: Homo sapiens

text: Homo sapiens

text: 51BR tumor PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 51

text: Homo sapiens

text: Homo sapiens

text: 51BR tumor PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 86

text: Homo sapiens

text: Homo sapiens

text: 86A tumor PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 86

text: Homo sapiens

text: Homo sapiens

text: 86A tumor PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 92

text: Homo sapiens

text: Homo sapiens

text: 92B3 tumor PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: MD Anderson melanoma patient 92

text: Homo sapiens

text: Homo sapiens

text: 92B3 tumor PE replicate2


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: 14T human melanoma cell line

text: Homo sapiens

text: Homo sapiens

text: 14T cell line PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: 8T human melanoma cell line

text: Homo sapiens

text: Homo sapiens

text: 8T cell line PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: 26T human melanoma cell line

text: Homo sapiens

text: Homo sapiens

text: 26T cell line PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: 17T human melanoma cell line

text: Homo sapiens

text: Homo sapiens

text: 17T cell line PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: 32T human melanoma cell line

text: Homo sapiens

text: Homo sapiens

text: 32T cell line PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: 81T human melanoma cell line

text: Homo sapiens

text: Homo sapiens

text: 81T cell line PE replicate1


text: WEIZMANN INSTITUE OF SCIENCE

text: public

text: human

text: 88T human melanoma cell line

text: Homo sapiens

text: Homo sapiens

text: 88T cell line PE replicate1


text: public

tag: Namespace:NEIKER-Instituto Vasco de Investigacion y Desarrollo Agrario

characteristic: collection date

text: field

characteristic: environment (biome)

text: Microcosms

characteristic: environment (feature)

text: soil

characteristic: environment (material)

text: Spain

characteristic: geographic location (country and/or sea)

unit: m

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: uncultured soil bacterium

text: Musrhem

characteristic: project name

text: uncultured soil bacterium

text: amplicon

characteristic: sequencing method

text: soil

characteristic: soil environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: NEIKER-Instituto Vasco de Investigacion y Desarrollo Agrario

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characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: field

text: Microcosms

text: soil

text: Spain

text: metagenome

text: uncultured soil bacterium

text: Musrhem

text: uncultured soil bacterium

text: amplicon

text: soil


text: Streptococcus agalactiae

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text: SC

text: public

text: Streptococcus agalactiae

characteristic: common name

text: Streptococcus agalactiae

characteristic: organism

text: Streptococcus agalactiae

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characteristic: title


text: UMC Utrecht

text: public

tag: Namespace:UMC Utrecht

text: human

text: 16S rRNA gene sequencing of uterine biopsy

characteristic: description

text: Homo sapiens

text: Homo sapiens


text: UTRECHT UNIVERSITY

text: public

tag: Namespace:UTRECHT UNIVERSITY

text: Illumina Sequencing of 21S00178-13

text: Netherlands

characteristic: geographic location (country and/or sea)

text: canine

text: Staphylococcus coagulans

text: Staphylococcus coagulans

text: Illumina Sequencing of 21S00178-13


text: UTRECHT UNIVERSITY

text: public

text: Illumina Sequencing of 21S00179-14

text: Netherlands

text: canine

text: Staphylococcus coagulans

text: Staphylococcus coagulans

text: Illumina Sequencing of 21S00179-14


text: UTRECHT UNIVERSITY

text: public

text: Illumina Sequencing of 21S00180-15

text: Netherlands

text: canine

text: Staphylococcus coagulans

text: Staphylococcus coagulans

text: Illumina Sequencing of 21S00180-15


text: UTRECHT UNIVERSITY

text: public

text: Illumina Sequencing of 21S00181-16

text: Netherlands

text: canine

text: Staphylococcus coagulans

text: Staphylococcus coagulans

text: Illumina Sequencing of 21S00181-16


text: UTRECHT UNIVERSITY

text: public

text: Illumina Sequencing of 21S00182-17

text: Netherlands

text: canine

text: Staphylococcus coagulans

text: Staphylococcus coagulans

text: Illumina Sequencing of 21S00182-17


text: UTRECHT UNIVERSITY

text: public

text: Illumina Sequencing of 21S00183-18

text: Netherlands

text: canine

text: Staphylococcus coagulans

text: Staphylococcus coagulans

text: Illumina Sequencing of 21S00183-18


text: UTRECHT UNIVERSITY

text: public

text: Illumina Sequencing of 21S00184-19

text: Netherlands

text: canine

text: Staphylococcus coagulans

text: Staphylococcus coagulans

text: Illumina Sequencing of 21S00184-19


text: University College London

text: public

tag: Namespace:University College London

text: Start 1/3 x standard dose TDS HFIM experiment

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis

text: prokaryote

characteristic: serovar

characteristic: strain


text: public

tag: Namespace:Institute of Clinical Molecular Biology (IKMB)

text: human

text: Archaic specimen (ancient DNA)

text: Homo sapiens

text: Homo sapiens

text: Altendorf

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characteristic: ENA first public

text: Institute of Clinical Molecular Biology (IKMB)

text: public

text: human

text: Archaic specimen (ancient DNA)

text: Homo sapiens

text: Homo sapiens

text: Altendorf


characteristic: ENA-CHECKLIST

text: public

text: human

text: Archaic specimen (ancient DNA)

text: Homo sapiens

text: Homo sapiens

text: Altendorf (later dating)


characteristic: External Id

text: public

text: human

text: Archaic specimen (ancient DNA)

text: Homo sapiens

text: Homo sapiens

text: Fellbach Öffingen


characteristic: INSDC center name

text: public

text: human

text: Archaic specimen (ancient DNA)

text: Homo sapiens

text: Homo sapiens

text: Niederpöring


characteristic: INSDC last update

text: public

text: human

text: Archaic specimen (ancient DNA)

text: Homo sapiens

text: Homo sapiens

text: Rimbeck


text: public

characteristic: INSDC status

text: human

text: Archaic specimen (ancient DNA)

text: Homo sapiens

text: Homo sapiens

text: Trebur


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characteristic: SRA accession

text: human

text: Archaic specimen (ancient DNA)

text: Homo sapiens

text: Homo sapiens

text: Warburg


text: Microbial ecology

text: public

tag: Namespace:Microbial ecology

characteristic: Submitter Id

characteristic: collection date

text: Sample of benthic sediment, taken from a pool located downstream a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Auvergne-Rh�ne-Alpes administrative region, Rh�ne department, Gr�zieu-la-Varenne town

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

text: ILMN-PTCF2 (GTGCCGYTRTGYGGCAAGA) and ILMN-PTCF2m (GTGCCCYTRTGYGGCAAGT); ILMN-PTCR2 (ATCAKYGCGGCGCGGTCRTA) and ILMNPTCR2m (ATGAGBGCTGCCCTGTCRTA)

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text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2122

characteristic: project name

text: after the combined-sewer overflow device was made compliant (less than 20 spill days per year)

characteristic: sampling campaign

characteristic: sampling transect ID

text: freshwater sediment metagenome

text: Sequencing by synthesis (Illumina MiSeq Illumina V3)

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: 200-235 bp, including the VPLCGK and YDRAAM conserved domains

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text: benthic sediment

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characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

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text: public

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text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

characteristic: organism

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2123

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

text: benthic sediment

characteristic: title

text: water


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

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characteristic: ENA first public

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text: Microbial ecology

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text: watercourse (ENVO:00000029)

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text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2119

text: before the combined-sewer overflow device was made compliant (more than 20 spill days per year)

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text: Thiopurine S-methyltransferase (tpm)

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text: benthic sediment

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text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

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text: France

characteristic: geographic location (depth)

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text: mimarks-survey

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text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2120

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text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2121

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text: Sample of benthic sediment, taken from a pool located upstream a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

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text: stream bed (ENVO_00000383)

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characteristic: geographic location (country and/or sea)

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text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2129

characteristic: sampling transect ID

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text: stream bed (ENVO_00000383)

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characteristic: geographic location (country and/or sea)

text: mimarks-survey

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text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2125

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: benthic sediment

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text: Microbial ecology

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text: watercourse (ENVO:00000029)

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characteristic: environment (feature)

text: sediment

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text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

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text: Auvergne-Rh�ne-Alpes administrative region, Rh�ne department, Gr�zieu-la-Varenne town

characteristic: geographic location (region and locality)

text: mimarks-survey

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text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2126

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text: water


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text: Microbial ecology

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text: stream bed (ENVO_00000383)

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characteristic: geographic location (country and/or sea)

text: mimarks-survey

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text: ILMN-PTCF2 (GTGCCGYTRTGYGGCAAGA) and ILMN-PTCF2m (GTGCCCYTRTGYGGCAAGT); ILMN-PTCR2 (ATCAKYGCGGCGCGGTCRTA) and ILMNPTCR2m (ATGAGBGCTGCCCTGTCRTA)

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text: watercourse (ENVO:00000029)

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characteristic: geographic location (region and locality)

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characteristic: geographic location (country and/or sea)

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characteristic: sampling transect ID

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text: stream bed (ENVO_00000383)

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characteristic: geographic location (country and/or sea)

text: mimarks-survey

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text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2131

text: before the combined-sewer overflow device was made compliant (more than 20 spill days per year)

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: benthic sediment

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text: Microbial ecology

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characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

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characteristic: geographic location (region and locality)

text: mimarks-survey

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text: freshwater sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2132

characteristic: project name

characteristic: sampling campaign

characteristic: sampling transect ID

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

text: benthic sediment

characteristic: title

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2133

text: freshwater sediment metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: benthic sediment

text: water


text: Microbial ecology

text: public

text: Sample of benthic sediment, taken from a riffle located upstream a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2141

characteristic: project name

characteristic: sampling campaign

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: benthic sediment

text: water

characteristic: water environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: Auvergne-Rh�ne-Alpes administrative region, Rh�ne department, Gr�zieu-la-Varenne town

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2137

characteristic: sampling transect ID

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

text: benthic sediment

characteristic: title

text: water


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

text: ILMN-PTCF2 (GTGCCGYTRTGYGGCAAGA) and ILMN-PTCF2m (GTGCCCYTRTGYGGCAAGT); ILMN-PTCR2 (ATCAKYGCGGCGCGGTCRTA) and ILMNPTCR2m (ATGAGBGCTGCCCTGTCRTA)

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2139

characteristic: project name

characteristic: sampling campaign

text: freshwater sediment metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: benthic sediment

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2140

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: benthic sediment

text: water

characteristic: water environmental package


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2142

characteristic: project name

characteristic: sampling campaign

characteristic: sampling transect ID

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

text: benthic sediment

characteristic: title

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2138

text: freshwater sediment metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: benthic sediment

text: water


text: Microbial ecology

text: public

text: Sample of benthic sediment, taken from a run located downstream a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2147

characteristic: project name

text: after the combined-sewer overflow device was made compliant (less than 20 spill days per year)

characteristic: sampling campaign

text: freshwater sediment metagenome

text: Sequencing by synthesis (Illumina MiSeq Illumina V3)

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: benthic sediment

text: water

characteristic: water environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2143

characteristic: sampling transect ID

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

text: 200-235 bp, including the VPLCGK and YDRAAM conserved domains

text: benthic sediment

characteristic: title

text: water


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2145

characteristic: project name

text: before the combined-sewer overflow device was made compliant (more than 20 spill days per year)

characteristic: sampling campaign

text: freshwater sediment metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: benthic sediment

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2146

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: benthic sediment

text: water

characteristic: water environmental package


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2148

characteristic: project name

characteristic: sampling campaign

characteristic: sampling transect ID

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

text: benthic sediment

characteristic: title

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: Auvergne-Rh�ne-Alpes administrative region, Rh�ne department, Gr�zieu-la-Varenne town

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2144

text: freshwater sediment metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: benthic sediment

text: water


text: Microbial ecology

text: public

text: Sample of benthic sediment, taken from a run located upstream a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

text: ILMN-PTCF2 (GTGCCGYTRTGYGGCAAGA) and ILMN-PTCF2m (GTGCCCYTRTGYGGCAAGT); ILMN-PTCR2 (ATCAKYGCGGCGCGGTCRTA) and ILMNPTCR2m (ATGAGBGCTGCCCTGTCRTA)

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2153

characteristic: project name

characteristic: sampling campaign

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: benthic sediment

text: water

characteristic: water environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2149

characteristic: sampling transect ID

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

text: benthic sediment

characteristic: title

text: water


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2151

characteristic: project name

characteristic: sampling campaign

text: freshwater sediment metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: benthic sediment

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2152

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: benthic sediment

text: water

characteristic: water environmental package


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

text: stream bed (ENVO_00000383)

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater sediment metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2154

characteristic: project name

characteristic: sampling campaign

characteristic: sampling transect ID

text: freshwater sediment metagenome

text: Thiopurine S-methyltransferase (tpm)

text: benthic sediment

characteristic: title

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: stream bed (ENVO_00000383)

text: sediment

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater sediment metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2150

text: freshwater sediment metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: benthic sediment

text: water


text: Microbial ecology

text: public

text: Sample of overflow water, taken at the immediate end of a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

text: watercourse (ENVO:00000029)

text: channel of an intermittent stream (ENVO:01000980 )

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: wastewater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2191

characteristic: project name

text: not provided

characteristic: sampling campaign

text: not provided

text: wastewater metagenome

text: Sequencing by synthesis (Illumina MiSeq Illumina V3)

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: overflow water

text: water

characteristic: water environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: wastewater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2192

text: not provided

text: not provided

characteristic: sampling transect ID

text: wastewater metagenome

text: Thiopurine S-methyltransferase (tpm)

text: 200-235 bp, including the VPLCGK and YDRAAM conserved domains

text: overflow water

characteristic: title

text: water


text: Microbial ecology

text: public

text: Sample of surface freshwater, taken from a pool located downstream a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2195

characteristic: project name

text: before the combined-sewer overflow device was made compliant (more than 20 spill days per year)

characteristic: sampling campaign

text: freshwater metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: surface freshwater

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: Auvergne-Rh�ne-Alpes administrative region, Rh�ne department, Gr�zieu-la-Varenne town

text: mimarks-survey

text: freshwater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2196

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: surface freshwater

text: water

characteristic: water environmental package


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

text: ILMN-PTCF2 (GTGCCGYTRTGYGGCAAGA) and ILMN-PTCF2m (GTGCCCYTRTGYGGCAAGT); ILMN-PTCR2 (ATCAKYGCGGCGCGGTCRTA) and ILMNPTCR2m (ATGAGBGCTGCCCTGTCRTA)

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2199

characteristic: project name

text: after the combined-sewer overflow device was made compliant (less than 20 spill days per year)

characteristic: sampling campaign

characteristic: sampling transect ID

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

text: surface freshwater

characteristic: title

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2200

text: freshwater metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: surface freshwater

text: water


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2201

characteristic: project name

characteristic: sampling campaign

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: surface freshwater

text: water

characteristic: water environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2202

characteristic: sampling transect ID

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

text: surface freshwater

characteristic: title

text: water


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2203

characteristic: project name

characteristic: sampling campaign

text: freshwater metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: surface freshwater

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: channel of an intermittent stream (ENVO:01000980 )

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2204

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: surface freshwater

text: water

characteristic: water environmental package


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2197

characteristic: project name

characteristic: sampling campaign

characteristic: sampling transect ID

text: freshwater metagenome

text: Sequencing by synthesis (Illumina MiSeq Illumina V3)

text: Thiopurine S-methyltransferase (tpm)

text: surface freshwater

characteristic: title

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2198

text: freshwater metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: 200-235 bp, including the VPLCGK and YDRAAM conserved domains

text: surface freshwater

text: water


text: Microbial ecology

text: public

text: Sample of surface freshwater, taken from a pool located downstream a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2193

characteristic: project name

characteristic: sampling campaign

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: surface freshwater

text: water

characteristic: water environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: Auvergne-Rh�ne-Alpes administrative region, Rh�ne department, Gr�zieu-la-Varenne town

text: mimarks-survey

text: freshwater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2194

text: before the combined-sewer overflow device was made compliant (more than 20 spill days per year)

characteristic: sampling transect ID

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

text: surface freshwater

characteristic: title

text: water


text: Microbial ecology

text: public

text: Sample of surface freshwater, taken from a pool located upstream a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

text: ILMN-PTCF2 (GTGCCGYTRTGYGGCAAGA) and ILMN-PTCF2m (GTGCCCYTRTGYGGCAAGT); ILMN-PTCR2 (ATCAKYGCGGCGCGGTCRTA) and ILMNPTCR2m (ATGAGBGCTGCCCTGTCRTA)

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2207

characteristic: project name

characteristic: sampling campaign

text: freshwater metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: surface freshwater

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2208

text: after the combined-sewer overflow device was made compliant (less than 20 spill days per year)

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: surface freshwater

text: water

characteristic: water environmental package


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2209

characteristic: project name

characteristic: sampling campaign

characteristic: sampling transect ID

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

text: surface freshwater

characteristic: title

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: watercourse (ENVO:00000029)

characteristic: environment (biome)

text: channel of an intermittent stream (ENVO:01000980 )

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: freshwater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2205

text: freshwater metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: surface freshwater

text: water


text: Microbial ecology

text: public

text: watercourse (ENVO:00000029)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: freshwater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2206

characteristic: project name

characteristic: sampling campaign

text: freshwater metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: surface freshwater

text: water

characteristic: water environmental package


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Sample of wastewater, taken in the nearest manhole to a combined-sewer overflow outlet spilling out in the channel of an intermittent stream

characteristic: description

text: wastewater (ENVO:00002001)

characteristic: environment (biome)

text: sewage (ENVO:00002018)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: Auvergne-Rh�ne-Alpes administrative region, Rh�ne department, Marcy-l'Etoile town

text: mimarks-survey

text: wastewater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2210

text: not provided

text: not provided

characteristic: sampling transect ID

text: wastewater metagenome

text: Sequencing by synthesis (Illumina MiSeq Illumina V3)

text: Thiopurine S-methyltransferase (tpm)

text: wastewater

characteristic: title

text: water


text: Microbial ecology

text: public

text: wastewater (ENVO:00002001)

text: sewage (ENVO:00002018)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: wastewater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2211

characteristic: project name

text: not provided

characteristic: sampling campaign

text: not provided

text: wastewater metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: 200-235 bp, including the VPLCGK and YDRAAM conserved domains

text: wastewater

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: wastewater (ENVO:00002001)

characteristic: environment (biome)

text: sewage (ENVO:00002018)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: wastewater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2212

text: not provided

text: not provided

text: wastewater metagenome

text: Thiopurine S-methyltransferase (tpm)

characteristic: target subfragment

text: wastewater

text: water

characteristic: water environmental package


text: Microbial ecology

text: public

text: wastewater (ENVO:00002001)

text: sewage (ENVO:00002018)

characteristic: environment (feature)

text: water

characteristic: environment (material)

text: France

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

characteristic: geographic location (region and locality)

text: mimarks-survey

characteristic: investigation type

text: wastewater metagenome

characteristic: organism

characteristic: pcr primers

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2213

characteristic: project name

text: not provided

characteristic: sampling campaign

text: not provided

characteristic: sampling transect ID

text: wastewater metagenome

text: Thiopurine S-methyltransferase (tpm)

text: wastewater

characteristic: title

text: water


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Microbial ecology

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

characteristic: description

text: wastewater (ENVO:00002001)

characteristic: environment (biome)

text: sewage (ENVO:00002018)

text: water

text: France

characteristic: geographic location (country and/or sea)

text: mimarks-survey

text: wastewater metagenome

text: Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2214

text: not provided

text: not provided

text: wastewater metagenome

characteristic: sequencing method

text: Thiopurine S-methyltransferase (tpm)

characteristic: target gene

text: wastewater

text: water


text: UNIVERSIDAD EL ROSARIO

text: public

tag: Namespace:UNIVERSIDAD EL ROSARIO

text: Trypanosoma cruzi

characteristic: organism

text: Trypanosoma cruzi


text: UNIVERSIDAD EL ROSARIO

text: public

text: Trypanosoma cruzi

text: Trypanosoma cruzi

text: GAPDH


text: UNIVERSIDAD EL ROSARIO

text: public

text: Trypanosoma cruzi

text: Trypanosoma cruzi

text: RPA


text: UNIVERSIDAD DEL MAR

text: public

tag: Namespace:UNIVERSIDAD DEL MAR

text: Corralero coastal lagoon sediment sample number 1, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

text: FASTQ_Generation_2018-12-17_00_11_50Z-143786102

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina Miseq


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSIDAD DEL MAR

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corralero coastal lagoon sediment sample number 2, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

text: eukaryote

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: title


text: UNIVERSIDAD DEL MAR

text: public

characteristic: collection date

text: Corralero coastal lagoon sediment sample number 3, dry season

characteristic: description

text: Tropical Coastal Lagoon

characteristic: environment (biome)

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (country and/or sea)

text: eukaryote

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

text: UNIVERSIDAD DEL MAR

text: public

text: Corralero coastal lagoon sediment sample number 5, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina Miseq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSIDAD DEL MAR

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corralero coastal lagoon sediment sample number 7, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

text: eukaryote

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: title


text: UNIVERSIDAD DEL MAR

text: public

characteristic: collection date

text: Corralero coastal lagoon sediment sample number 8, dry season

characteristic: description

text: Tropical Coastal Lagoon

characteristic: environment (biome)

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (country and/or sea)

text: eukaryote

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

text: UNIVERSIDAD DEL MAR

text: public

text: Corralero coastal lagoon sediment sample number 9, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina Miseq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSIDAD DEL MAR

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corralero coastal lagoon sediment sample number 10, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

text: eukaryote

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: title


text: UNIVERSIDAD DEL MAR

text: public

characteristic: collection date

text: Corralero coastal lagoon sediment sample number 11, dry season

characteristic: description

text: Tropical Coastal Lagoon

characteristic: environment (biome)

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (country and/or sea)

text: eukaryote

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

text: UNIVERSIDAD DEL MAR

text: public

text: Corralero coastal lagoon sediment sample number 12, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina Miseq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSIDAD DEL MAR

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corralero coastal lagoon sediment sample number 13, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

text: eukaryote

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: title


text: UNIVERSIDAD DEL MAR

text: public

characteristic: collection date

text: Corralero coastal lagoon sediment sample number 14, dry season

characteristic: description

text: Tropical Coastal Lagoon

characteristic: environment (biome)

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (country and/or sea)

text: eukaryote

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

text: UNIVERSIDAD DEL MAR

text: public

text: Corralero coastal lagoon sediment sample number 16, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina Miseq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSIDAD DEL MAR

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corralero coastal lagoon sediment sample number 17, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

text: eukaryote

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: title


text: UNIVERSIDAD DEL MAR

text: public

characteristic: collection date

text: Corralero coastal lagoon sediment sample number 18, dry season

characteristic: description

text: Tropical Coastal Lagoon

characteristic: environment (biome)

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (country and/or sea)

text: eukaryote

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

text: UNIVERSIDAD DEL MAR

text: public

text: Corralero coastal lagoon sediment sample number 20, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina Miseq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSIDAD DEL MAR

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corralero coastal lagoon sediment sample number 21, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

text: eukaryote

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: title


text: UNIVERSIDAD DEL MAR

text: public

characteristic: collection date

text: Corralero coastal lagoon sediment sample number 24, dry season

characteristic: description

text: Tropical Coastal Lagoon

characteristic: environment (biome)

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (country and/or sea)

text: eukaryote

text: sediment metagenome

characteristic: organism

text: FASTQ_Generation_2018-12-17_00_11_50Z-143786102

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

text: UNIVERSIDAD DEL MAR

text: public

text: Corralero coastal lagoon sediment sample number 26, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina Miseq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSIDAD DEL MAR

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corralero coastal lagoon sediment sample number 27, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

text: eukaryote

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: title


text: UNIVERSIDAD DEL MAR

text: public

characteristic: collection date

text: Corralero coastal lagoon sediment sample number 29, dry season

characteristic: description

text: Tropical Coastal Lagoon

characteristic: environment (biome)

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (country and/or sea)

text: eukaryote

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

text: UNIVERSIDAD DEL MAR

text: public

text: Corralero coastal lagoon sediment sample number 31, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

text: Illumina Miseq


characteristic: ENA-CHECKLIST

characteristic: External Id

text: UNIVERSIDAD DEL MAR

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Corralero coastal lagoon sediment sample number 32, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

text: eukaryote

text: sediment metagenome

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: title


text: UNIVERSIDAD DEL MAR

text: public

characteristic: collection date

text: Corralero coastal lagoon sediment sample number 35, dry season

characteristic: description

text: Tropical Coastal Lagoon

characteristic: environment (biome)

text: Coastal Lagoon

characteristic: environment (feature)

text: Soil, mud, sand

characteristic: environment (material)

text: Mexico

characteristic: geographic location (country and/or sea)

text: eukaryote

text: sediment metagenome

characteristic: organism

text: sediment metagenome

text: sediment

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

text: UNIVERSIDAD DEL MAR

text: public

text: Corralero coastal lagoon sediment sample number 37, dry season

text: Tropical Coastal Lagoon

text: Coastal Lagoon

text: Soil, mud, sand

text: Mexico

characteristic: geographic location (depth)

characteristic: geographic location (elevation)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: eukaryote

characteristic: investigation type

text: sediment metagenome

characteristic: project name

text: sediment metagenome

text: sediment

characteristic: sediment environmental package

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