text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73644

text: Virus specific T cell

text: human

text: LCL-derived EBV VST

text: New Zealand

text: Homo sapiens

text: Homo sapiens


status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73645

tag: Namespace:Institute of Infection and Immunity Research

characteristic: Submitter Id

text: Virus specific T cell

text: Scottish National Blood Transfusion Service

characteristic: collection date

text: human

characteristic: common name

text: LCL-derived EBV VST

characteristic: description

text: New Zealand

characteristic: geographic location (country and/or sea)

text: Homo sapiens

characteristic: organism

text: Homo sapiens

characteristic: title


text: Institute of Infection and Immunity Research

text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73646

text: Virus specific T cell

text: human

text: LCL-derived EBV VST

text: New Zealand

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73647

text: Virus specific T cell

text: human

text: LCL-derived EBV VST

text: New Zealand

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73648

text: CD3+ T cell

text: human

text: Pan T cells

text: USA

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73649

text: CD3+ T cell

text: human

text: Pan T cells

text: USA

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73650

text: CD3+ T cell

text: human

text: Pan T cells

text: USA

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73651

text: CD3+ T cell

text: human

text: Pan T cells

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73652

text: CD3+ T cell

text: human

text: Pan T cells

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73653

text: CD3+ T cell

text: human

text: Pan T cells

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73654

text: CD3+ T cell

text: human

text: Pan T cells

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73655

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73656

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73657

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:250-73658

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:251-73659

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:251-73660

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:251-73661

text: Virus specific T cell

text: Scottish National Blood Transfusion Service

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: Institute of Infection and Immunity Research

text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:251-73662

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:251-73663

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: USA

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-17:09:34:251-73664

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: USA

text: Homo sapiens

text: Homo sapiens


text: public

text: ena-SAMPLE-TAB-10-12-2023-19:06:42:314-73673

text: Virus specific T cell

text: human

text: Peptide-derived EBV VST

text: United Kingdom

text: Homo sapiens

text: Homo sapiens


E-MTAB-13674:CGD01 V2

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD01 V2

tag: Namespace:Bioinformatic Solutions LLC

text: 28.5 YO

unit: year

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

text: human

text: IFNG

characteristic: compound

text: Protocols: IFN-γ administration was initiated at the dose of 50 mcg/m2 given subcutaneously on the standard schedule of Monday, Wednesday, and Friday in the evening before bedtime. Then, 10-12 hours after the 1st dose, and the 4th dose of IFN-γ additional blood samples were obtained. Neutrophils were isolated from heparinized peripheral blood by Dextran sedimentation, Ficoll-Hypaque density centrifugation, and hypotonic lysis of red blood cells 36,37. Neutrophils were quantitated manually in a hemocytometer in the presence of 3% paraformaldehyde. RNA from neutrophils was isolated by standard technique. RNA was used to prepare libraries using the Universal Plus mRNA-seq kit from Tecan Genomics (Redwood City, CA).

text: adult

characteristic: developmental stage

text: chronic granulomatous disease

characteristic: disease

unit: microgram per kilogram per day

characteristic: dose

text: Baseline blood draw

unit: hour

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: CGD01 V2


E-MTAB-13674:CGD01 V3

characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD01 V3

characteristic: Submitter Id

text: 28.5 YO

text: ArrayExpress

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: adult

text: chronic granulomatous disease

text: Blood draw 10-12 hours after the 1st dose

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD01 V3


E-MTAB-13674:CGD01 V4

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD01 V4

text: 28.5 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

text: human

characteristic: common name

text: IFNG

characteristic: compound

characteristic: description

text: adult

characteristic: developmental stage

text: chronic granulomatous disease

text: Blood draw 10-12 hours after the 4th dose

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD01 V4

characteristic: title


E-MTAB-13674:CGD02 V2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD02 V2

text: 18.6 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

text: IFNG

text: adult

text: chronic granulomatous disease

characteristic: disease

characteristic: dose

text: Baseline blood draw

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: CGD02 V2


E-MTAB-13674:CGD02 V3

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD02 V3

characteristic: Submitter Id

text: 18.6 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: adult

text: chronic granulomatous disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD02 V3


E-MTAB-13674:CGD02 V4

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD02 V4

text: 18.6 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

characteristic: common name

text: IFNG

characteristic: compound

characteristic: description

text: adult

characteristic: developmental stage

text: chronic granulomatous disease

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD02 V4

characteristic: title


E-MTAB-13674:CGD03 V2

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

text: public

text: E-MTAB-13674:CGD03 V2

text: 17.9 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

characteristic: disease

characteristic: dose

text: Baseline blood draw

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: CGD03 V2


E-MTAB-13674:CGD03 V3

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD03 V3

characteristic: Submitter Id

text: 17.9 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD03 V3


E-MTAB-13674:CGD03 V4

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

text: public

text: E-MTAB-13674:CGD03 V4

text: 17.9 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

characteristic: common name

text: IFNG

characteristic: compound

characteristic: description

text: juvenile

characteristic: developmental stage

text: chronic granulomatous disease

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD03 V4

characteristic: title


E-MTAB-13674:CGD04 V2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD04 V2

text: 12 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

characteristic: disease

characteristic: dose

text: Baseline blood draw

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: CGD04 V2


E-MTAB-13674:CGD04 V3

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD04 V3

characteristic: Submitter Id

text: 12 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD04 V3


E-MTAB-13674:CGD04 V4

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD04 V4

text: 12 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

characteristic: common name

text: IFNG

characteristic: compound

characteristic: description

text: juvenile

characteristic: developmental stage

text: chronic granulomatous disease

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD04 V4

characteristic: title


E-MTAB-13674:CGD05 V2

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

text: public

text: E-MTAB-13674:CGD05 V2

text: 5.3 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

characteristic: disease

characteristic: dose

text: Baseline blood draw

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: CGD05 V2


E-MTAB-13674:CGD05 V3

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD05 V3

characteristic: Submitter Id

text: 5.3 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD05 V3


E-MTAB-13674:CGD05 V4

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

text: public

text: E-MTAB-13674:CGD05 V4

text: 5.3 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

characteristic: common name

text: IFNG

characteristic: compound

characteristic: description

text: juvenile

characteristic: developmental stage

text: chronic granulomatous disease

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD05 V4

characteristic: title


E-MTAB-13674:CGD06 V2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD06 V2

text: 23.2 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

characteristic: disease

characteristic: dose

text: Baseline blood draw

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: CGD06 V2


E-MTAB-13674:CGD06 V3

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD06 V3

characteristic: Submitter Id

text: 23.2 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD06 V3


E-MTAB-13674:CGD06 V4

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD06 V4

text: 23.2 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

characteristic: common name

text: IFNG

characteristic: compound

characteristic: description

text: juvenile

characteristic: developmental stage

text: chronic granulomatous disease

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD06 V4

characteristic: title


E-MTAB-13674:CGD07 V2

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

text: public

text: E-MTAB-13674:CGD07 V2

text: 17.8 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

characteristic: disease

characteristic: dose

text: Baseline blood draw

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: female

characteristic: sex

text: CGD07 V2


E-MTAB-13674:CGD07 V3

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD07 V3

characteristic: Submitter Id

text: 17.8 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: CGD07 V3


E-MTAB-13674:CGD07 V4

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

text: public

text: E-MTAB-13674:CGD07 V4

text: 17.8 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

characteristic: common name

text: IFNG

characteristic: compound

characteristic: description

text: juvenile

characteristic: developmental stage

text: chronic granulomatous disease

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: female

text: CGD07 V4

characteristic: title


E-MTAB-13674:CGD08 V2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD08 V2

text: 5 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

characteristic: disease

characteristic: dose

text: Baseline blood draw

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: CGD08 V2


E-MTAB-13674:CGD08 V4

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD08 V4

characteristic: Submitter Id

text: 5 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD08 V4


E-MTAB-13674:CGD09 V2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

text: public

text: E-MTAB-13674:CGD09 V2

text: 13.4 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

characteristic: common name

text: IFNG

characteristic: compound

characteristic: description

text: juvenile

characteristic: developmental stage

text: chronic granulomatous disease

text: Baseline blood draw

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD09 V2

characteristic: title


E-MTAB-13674:CGD09 V3

characteristic: External Id

text: Bioinformatic Solutions LLC

characteristic: INSDC center name

text: public

text: E-MTAB-13674:CGD09 V3

text: 13.4 YO

text: ArrayExpress

text: neutrophils

text: not collected

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

characteristic: disease

characteristic: dose

characteristic: dosing time

text: not collected

characteristic: individual

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: blood

characteristic: organism part

text: Homo sapiens

text: male

characteristic: sex

text: CGD09 V3


E-MTAB-13674:CGD09 V4

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Bioinformatic Solutions LLC

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-13674:CGD09 V4

characteristic: Submitter Id

text: 13.4 YO

characteristic: age

text: ArrayExpress

characteristic: broker name

text: neutrophils

text: not collected

characteristic: collection date

text: human

text: IFNG

text: juvenile

text: chronic granulomatous disease

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: blood

text: Homo sapiens

text: male

text: CGD09 V4


characteristic: External Id

characteristic: INSDC center name

text: public

tag: Namespace:Institute of Biochemistry Justus-Liebig University Giessen

text: ArrayExpress

text: not collected

text: fission yeast

characteristic: common name

text: Protocols: Cells were grown in EMMG, then shifted to YES for 5h or 9h. S. cerevisiae spike-in cells were added at at 1:5 OD600 ratio immediately before harvesting by centrifugation. Total RNA was extracted with the hot phenol method. Libraries were prepared with the VAHTS Stranded mRNA-seq Library Prep Kit (Vazyme Biotech) after poly(A) selection.

characteristic: description

text: h+ leu1-32 ura4D18 ade6-M216 dbp2-intron2D

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Schizosaccharomyces pombe

characteristic: organism

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe

characteristic: strain

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Institute of Biochemistry Justus-Liebig University Giessen

text: public

text: ArrayExpress

text: not collected

text: fission yeast

text: not collected

text: not applicable

characteristic: isolate

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

characteristic: organism part

text: Schizosaccharomyces pombe


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: fission yeast

text: h+ leu1-32 ura4D18 ade6-M216 his3-D1 dbp2::ura4:P.nmt1-dbp2

text: not collected

text: not applicable

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe


characteristic: External Id

text: public

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: fission yeast

text: Protocols: Cells were grown in EMMG, then shifted to YES for 5h or 9h. S. cerevisiae spike-in cells were added at at 1:5 OD600 ratio immediately before harvesting by centrifugation. Total RNA was extracted with the hot phenol method. Libraries were constructed using the TruSeq protocol (Illumina) after ribodepletion with the Ribo-Zero Magnetic Kit for yeast (Epicentre).

text: h+ leu1-32 ura4D18 ade6-M216 his3-D1 dbp2::ura4:P.nmt1-dbp2-3myc:kanMX

text: not collected

text: not applicable

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe


characteristic: INSDC center name

text: public

text: ArrayExpress

text: not collected

text: fission yeast

characteristic: common name

characteristic: description

text: h+ leu1-32 ura4D18 ade6-M216

text: not collected

text: not applicable

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe


text: public

text: ArrayExpress

text: not collected

text: fission yeast

text: h+ leu1-32 ura4D18 ade6-M216 dbp2::dbp2-3myc:kanMX

characteristic: genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Schizosaccharomyces pombe

characteristic: organism

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe


characteristic: ENA first public

text: public

text: ArrayExpress

text: not collected

text: fission yeast

text: Protocols: Cells were grown in YES and harvested by centrifugation after crosslinking with 1% formaldehyde for 20 min at room temperature. ChIP experiments were performed as described in Wittmann et al., Nat Commun 8, 14861 (2017). HTP-tagged proteins were immunoprecipitated with IgG-coupled Dynabeads (tosylactivated M280, Thermo Scientific). Sequencing libraries were constructed with the TruSeq ChIP Library Preparation Kit (Illumina).

text: h+ leu1-32 ura4D1 ade6-M2 dbp2::dbp2-(his6-TEV-protein A):kanMX6

text: not collected

text: not applicable

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe

characteristic: strain

characteristic: title


characteristic: ENA-CHECKLIST

text: public

text: ArrayExpress

text: not collected

text: fission yeast

text: h+ leu1-32 ura4D1 ade6-M2 srp2::srp2-(his6-TEV-protein A):kanMX6

text: not collected

text: not applicable

characteristic: isolate

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

characteristic: organism part

text: Schizosaccharomyces pombe


characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ArrayExpress

text: not collected

text: fission yeast

text: h+ leu1-32 ura4D18 ade6-M216

text: not collected

text: not applicable

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe


characteristic: External Id

text: public

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

text: fission yeast

text: Protocols: Cells were grown in EMMG, then shifted to YES for 9h. S. cerevisiae spike-in cells were added at at 1:5 OD600 ratio immediately before crosslinking with 1% formaldehyde for 20 min at room temperature. ChIP experiments were performed as described in Wittmann et al., Nat Commun 8, 14861 (2017). RNAPII was immunoprecipitated with antibody against Rpb1 (8WG16, Millipore) coupled to 20 µl of protein-G dynabeads (Life Technologies). Libraries were prepared with the NEBNext Fast DNA Library Prep Set for Ion Torrent Kit (NEB).

text: not collected

text: not applicable

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe


characteristic: INSDC center name

text: public

text: ArrayExpress

text: not collected

characteristic: collection date

text: fission yeast

characteristic: common name

text: not collected

text: not applicable

text: Schizosaccharomyces pombe

text: Schizosaccharomyces pombe

text: whole organism

text: Schizosaccharomyces pombe


text: Candiolo Cancer Institute

text: public

tag: Namespace:Candiolo Cancer Institute

text: human

text: Italy

characteristic: geographic location (country and/or sea)

text: Homo sapiens

text: Homo sapiens

text: Cell line


text: AZ

text: public

text: ArrayExpress

text: immortal cell line cell

text: not collected

text: human

text: Protocols: ~2 million cells per sample were lysed in 350uL of RLT and stored at -80 until subsequent extraction. RNA was extracted using the RNeasy 96 QIAcube HT Kit (Qiagen) with a DNAse digest as per manufactures recommendations. Libraries were prepared using mRNA Stranded library preparation kit (Illumina) and subsequently quantified by Qubit and KAPA library quantification kit, ROX low (Roche). Library sizes were also determined by bioanalyzer.

characteristic: description

text: adult

characteristic: developmental stage

text: non-small cell lung adenocarcinoma

characteristic: disease

text: EV

characteristic: genetic modification

text: EGFR mutant

characteristic: genotype

text: not collected

text: not applicable

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: lung

characteristic: replicate

text: Homo sapiens


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: AZ

text: public

text: ArrayExpress

text: immortal cell line cell

text: not collected

text: human

text: adult

text: non-small cell lung adenocarcinoma

text: NF2 KO

text: EGFR mutant

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

text: Homo sapiens

text: lung

characteristic: organism part

text: Homo sapiens

characteristic: title


text: AZ

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: immortal cell line cell

text: not collected

text: human

text: adult

text: non-small cell lung adenocarcinoma

text: Non-targeting control

text: EGFR mutant

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: lung

text: Homo sapiens


text: AZ

characteristic: INSDC center name

text: public

text: ArrayExpress

text: immortal cell line cell

text: not collected

characteristic: collection date

text: human

characteristic: common name

text: adult

text: non-small cell lung adenocarcinoma

text: EGFR mutant

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: lung

text: Homo sapiens


text: HUN-REN BRC

text: public

text: E. coli

text: Escherichia coli  ATCC25922 line adapted to benzalkonium chloride (BAC)

characteristic: description

text: Hungary

text: Escherichia coli

text: Escherichia coli

text: ATCC 25922 [DSM 1103, NCIB 12210]

characteristic: strain


text: HUN-REN BRC

text: public

text: E. coli

text: Escherichia coli  ATCC25922 line adapted to chlorhexidine (CHH)

text: Hungary

text: Escherichia coli

characteristic: organism

text: Escherichia coli

text: ATCC 25922 [DSM 1103, NCIB 12210]


text: HUN-REN BRC

text: public

text: E. coli

text: Escherichia coli  ATCC25922 line adapted to triclosan (TCS)

text: Hungary

text: Escherichia coli

text: Escherichia coli

text: ATCC 25922 [DSM 1103, NCIB 12210]


text: HUN-REN BRC

text: public

text: E. coli

text: Escherichia coli ATCC25922 ancesor strain

text: Hungary

text: Escherichia coli

text: Escherichia coli

text: ATCC 25922 [DSM 1103, NCIB 12210]


text: HUN-REN BRC

text: public

text: Klebsiella pneumoniae  ATCC10031 line adapted to benzalkonium chloride (BAC)

text: Hungary

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: ATCC 10031 (PCI 602)


text: HUN-REN BRC

text: public

text: Klebsiella pneumoniae  ATCC10031 line adapted to chlorhexidine (CHH)

text: Hungary

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: ATCC 10031 (PCI 602)


text: HUN-REN BRC

text: public

text: Klebsiella pneumoniae  ATCC10031 line adapted to triclosan (TCS)

text: Hungary

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: ATCC 10031 (PCI 602)


text: HUN-REN BRC

text: public

text: Klebsiella pneumoniae ATCC10031 ancesor strain

text: Hungary

text: Klebsiella pneumoniae

text: Klebsiella pneumoniae

text: ATCC 10031 (PCI 602)


text: HUN-REN BRC

text: public

text: Staphylococcus aureus  ATCC25923 line adapted to benzalkonium chloride (BAC)

text: Hungary

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ATCC 25923


text: HUN-REN BRC

text: public

text: Staphylococcus aureus  ATCC25923 line adapted to chlorhexidine (CHH)

text: Hungary

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ATCC 25923


text: HUN-REN BRC

text: public

text: Staphylococcus aureus  ATCC25923 line adapted to triclosan (TCS)

text: Hungary

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ATCC 25923


text: HUN-REN BRC

text: public

text: Staphylococcus aureus ATCC25923 ancesor strain

text: Hungary

text: Staphylococcus aureus

text: Staphylococcus aureus

text: ATCC 25923


text: Duke University

text: public

unit: day

characteristic: age

text: ArrayExpress

text: not collected

text: Japanese rice

text: Kitaake

characteristic: cultivar

text: Protocols: Sections (root tip to end of lateral root cap: Meristem; end of lateral root cap to the start of root hair elongation: Elongation; 1mm each beyond the start of root hair elongation: Maturation1 and Maturation2) were harvested into 10 μL RNA-later (Ambion) in the lid of a 1.5 ml tube. Samples were frozen in liquid nitrogen and stored at −80C X.kitaake was used as wild type. Rice seeds were dehulled, sterilized with 50% bleach for 10 min, and rinsed four to five times with sterile water. All plant growth was in Yoshida’s nutrient solution solidified with gellan gum (Gelzan, Caisson Inc).Growth boxes were kept at 4°C in the dark for 2-3 days until the seeds germinate, then transferred to a percival growth chamber set to 28°C, and consistant light. Rice seedlings were grown in the percival for 1-3 days before harvesting. Tissue samples were processed by grinding with a blue homogenization pestle. RNA was isolated using the Zymo MagBead RNA Isolation kit according to the manufacturer’s protocol (Zymo). RNA was used as input into the Lexogen QuantSeq 3′ FWD RNA-Seq library preparation procedure according to the manufacturer’s protocol, using the Unique Molecular Identifier (UMI) PCR add-on kit.

text: Meristem

characteristic: developmental stage

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group

text: root

text: Oryza sativa Japonica Group


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Duke University

text: public

text: ArrayExpress

text: not collected

text: Japanese rice

text: Kitaake

text: Elongation

text: wild type genotype

text: not collected

text: not applicable

characteristic: isolate

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group

text: root

characteristic: organism part

text: Oryza sativa Japonica Group


text: Duke University

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

text: not collected

text: Japanese rice

text: Kitaake

text: wild type genotype

text: not collected

text: not applicable

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group

text: root

text: Oryza sativa Japonica Group

characteristic: title


text: Duke University

characteristic: INSDC center name

text: public

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: Japanese rice

characteristic: common name

text: Kitaake

text: Whole root

text: wild type genotype

text: not collected

text: not applicable

text: Oryza sativa Japonica Group

text: Oryza sativa Japonica Group

text: root

text: Oryza sativa Japonica Group


text: Centre of New Technologies University of Warsaw

text: public

text: Arctic lemming

text: Pietraszyn 11

characteristic: description

text: Poland

characteristic: geographic location (country and/or sea)

text: 50.034; 18.089

text: Dicrostonyx torquatus

characteristic: organism

text: Dicrostonyx torquatus

text: Dicrostonyx torquatus


text: public

text: Pietraszyn 11

text: Poland

text: 50.034; 18.089

text: Lasiopodomys anglicus

text: Lasiopodomys anglicus

text: Lasiopodomys anglicus


text: HUN-REN–SU System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, H-1089 Budapest, Hungary

text: public

unit: week

characteristic: age

text: ArrayExpress

text: not collected

text: Norway rat

text: Protocols: Left ventricles were snap frozen in liquid nitrogen and powdered Viogene miTotal RNA Extraction Miniprep System QuantSeq 3‘mRNA-Seq Library Prep Kit FWD for Illumina

text: adult

characteristic: developmental stage

text: high fat diet

characteristic: diet

text: wild type genotype

text: not collected

characteristic: individual

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

characteristic: sex

text: Wistar

characteristic: strain


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

characteristic: INSDC status

text: ArrayExpress

text: not collected

text: Norway rat

text: adult

text: normal

text: wild type genotype

characteristic: genotype

text: not collected

text: not applicable

characteristic: isolate

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

characteristic: organism part

text: Rattus norvegicus

text: male

text: Wistar


characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: ArrayExpress

characteristic: broker name

text: not collected

characteristic: collection date

text: Norway rat

text: Protocols: Lent ventricular samples were frozen in liquid nitrogen, then samples were powdered. Total RNA was extracted using Viogene miTotal RNA Extraction Miniprep System (Viogene Biotek, New Taipei City, Taiwan, R.O.C) according to the manufacturer’s protocol.  For small RNA library construction, NEBNext Multiplex Small RNA Library Prep Set for Illumina (New England Biolabs, Ipswich, MA, USA) was applied according to the manufacturer’s protocol.

text: adult

text: high fat diet

text: wild type genotype

text: not collected

text: not applicable

text: Rattus norvegicus

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Wistar

characteristic: title


text: public

characteristic: age

text: ArrayExpress

text: not collected

text: Norway rat

characteristic: common name

characteristic: description

text: adult

characteristic: developmental stage

text: standard

text: wild type genotype

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Rattus norvegicus

characteristic: organism

text: Rattus norvegicus

text: heart left ventricle

text: Rattus norvegicus

text: male

text: Wistar


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17306

text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: metagenome

characteristic: investigation type

text: Animal distal gut

characteristic: local environmental context

text: Homo sapiens

text: Swabs for stool sampling

characteristic: project name

text: Homo sapiens

text: Illumina Miseq

characteristic: sequencing method


text: CUSB-HM

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17307

characteristic: Submitter Id

text: human biome

characteristic: collection date

text: human

characteristic: common name

text: stool

text: stool

text: United Kingdom

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17308

text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

characteristic: description

text: stool

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

characteristic: organism

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17309

text: human biome

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: metagenome

characteristic: investigation type

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


text: CUSB-HM

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17310

text: human biome

text: human

text: stool

text: stool

text: United Kingdom

text: stool

text: metagenome

text: Animal distal gut

characteristic: local environmental context

text: Homo sapiens

text: Swabs for stool sampling

characteristic: project name

text: Homo sapiens

text: Illumina Miseq

characteristic: sequencing method


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17311

characteristic: Submitter Id

text: human biome

characteristic: collection date

text: human

characteristic: common name

text: stool

text: stool

text: United Kingdom

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq

characteristic: title


text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17312

text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

characteristic: description

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

characteristic: organism

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


text: CUSB-HM

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17313

text: human biome

text: human

text: stool

text: stool

text: United Kingdom

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: metagenome

characteristic: investigation type

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CUSB-HM

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17314

text: human biome

text: human

text: stool

text: stool

text: United Kingdom

text: stool

text: metagenome

text: Animal distal gut

characteristic: local environmental context

text: Homo sapiens

text: Swabs for stool sampling

characteristic: project name

text: Homo sapiens

text: Illumina Miseq

characteristic: sequencing method


text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17315

characteristic: Submitter Id

text: human biome

characteristic: broad-scale environmental context

characteristic: collection date

text: human

characteristic: common name

text: stool

characteristic: description

text: stool

text: United Kingdom

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq

characteristic: title


text: CUSB-HM

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17316

text: human biome

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

characteristic: organism

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:774-17317

text: human biome

text: human

text: stool

text: stool

text: United Kingdom

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: metagenome

characteristic: investigation type

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


text: CUSB-HM

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17318

characteristic: Submitter Id

text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

text: stool

text: United Kingdom

text: stool

text: metagenome

text: Animal distal gut

characteristic: local environmental context

text: Homo sapiens

text: Swabs for stool sampling

characteristic: project name

text: Homo sapiens

text: Illumina Miseq

characteristic: sequencing method


text: CUSB-HM

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17319

text: human biome

characteristic: collection date

text: human

characteristic: common name

text: stool

characteristic: description

text: stool

text: United Kingdom

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17320

text: human biome

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

characteristic: organism

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


text: CUSB-HM

text: public

characteristic: SRA accession

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17321

characteristic: Submitter Id

text: human biome

text: human

text: stool

text: stool

text: United Kingdom

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: metagenome

characteristic: investigation type

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


text: CUSB-HM

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17322

text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

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characteristic: local environmental context

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characteristic: ENA first public

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text: CUSB-HM

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text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17323

text: human biome

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text: stool

text: United Kingdom

text: stool

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text: CUSB-HM

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characteristic: SRA accession

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17324

characteristic: Submitter Id

text: human biome

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

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text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17325

text: human biome

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text: stool

text: stool

text: United Kingdom

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: metagenome

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characteristic: ENA first public

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text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17326

text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

text: stool

text: United Kingdom

text: stool

text: P105 F20_Stool_P105

text: metagenome

text: Animal distal gut

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text: Homo sapiens

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text: CUSB-HM

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characteristic: Submitter Id

text: human biome

characteristic: collection date

text: human

characteristic: common name

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text: stool

text: United Kingdom

text: stool

text: P105 F9_Stool_P105

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text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17328

text: human biome

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: P104 F18_Stool_P104

text: metagenome

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characteristic: ENA first public

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text: CUSB-HM

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text: ena-SAMPLE-TAB-15-04-2024-14:35:22:775-17329

text: human biome

text: human

text: stool

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characteristic: geographic location (longitude)

text: stool

characteristic: host body product

text: P104 F9_Stool_P104

characteristic: host subject id

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text: CUSB-HM

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characteristic: Submitter Id

text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

text: stool

text: United Kingdom

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text: P103 F20_Stool_P103

text: metagenome

text: Animal distal gut

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text: human biome

characteristic: collection date

text: human

characteristic: common name

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text: stool

text: United Kingdom

text: stool

text: P103 F7_Stool_P103

text: metagenome

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characteristic: ENA first public

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text: CUSB-HM

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text: ena-SAMPLE-TAB-15-04-2024-14:35:22:776-17332

text: human biome

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: P102 F16_Stool_P102

text: metagenome

text: Animal distal gut

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text: Swabs for stool sampling

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text: CUSB-HM

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characteristic: SRA accession

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characteristic: Submitter Id

text: human biome

text: human

text: stool

text: stool

text: United Kingdom

characteristic: geographic location (longitude)

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characteristic: host body product

text: P102 F7_Stool_P102

characteristic: host subject id

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text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

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text: United Kingdom

text: stool

text: P101 F18_Stool_P101

text: metagenome

text: Animal distal gut

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text: ena-SAMPLE-TAB-15-04-2024-14:35:22:776-17335

text: human biome

characteristic: collection date

text: human

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text: United Kingdom

text: stool

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text: metagenome

text: Animal distal gut

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text: CUSB-HM

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characteristic: SRA accession

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:776-17336

characteristic: Submitter Id

text: human biome

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: metagenome

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text: Homo sapiens

characteristic: organism

text: Swabs for stool sampling

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characteristic: INSDC center name

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text: ena-SAMPLE-TAB-15-04-2024-14:35:22:776-17337

text: human biome

text: human

text: stool

text: stool

text: United Kingdom

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: metagenome

characteristic: investigation type

text: Animal distal gut

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text: Swabs for stool sampling

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characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:776-17338

text: human biome

characteristic: broad-scale environmental context

text: human

text: stool

text: stool

text: United Kingdom

text: stool

text: metagenome

text: Animal distal gut

characteristic: local environmental context

text: Homo sapiens

text: Swabs for stool sampling

characteristic: project name

text: Homo sapiens

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text: CUSB-HM

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characteristic: SRA accession

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:776-17339

characteristic: Submitter Id

text: human biome

characteristic: collection date

text: human

characteristic: common name

text: stool

characteristic: description

text: stool

text: United Kingdom

text: stool

text: Gut +ve_Control_Gut

text: metagenome

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

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characteristic: title


text: CUSB-HM

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:776-17340

text: human biome

text: human

text: stool

text: stool

characteristic: environmental medium

text: United Kingdom

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: stool

text: metagenome

text: Animal distal gut

text: Homo sapiens

characteristic: organism

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CUSB-HM

text: public

text: ena-SAMPLE-TAB-15-04-2024-14:35:22:776-17341

text: human biome

text: human

text: stool

text: stool

text: United Kingdom

characteristic: geographic location (longitude)

text: stool

characteristic: host body product

characteristic: host subject id

text: metagenome

characteristic: investigation type

text: Animal distal gut

text: Homo sapiens

text: Swabs for stool sampling

text: Homo sapiens

text: Illumina Miseq


text: Royal Botanic Gardens, Kew

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: 85 2925 /b

text: de Vos, J.M.

text: not provided

text: s.n.

characteristic: collectorNo

text: not provided

text: ZSS:Living_collection:85 2925 /b

text: Rebutia neocumingii

text: Rebutia neocumingii

text: de Vos, J.M. s.n.; 85 2925 /b (ZSS); 85 2925 /b

text: Rebutia neocumingii


text: Royal Botanic Gardens, Kew

text: public

text: 92 1739 /a

text: de Vos, J.M.

text: not provided

characteristic: collection date

text: s.n.

text: not provided

text: ZSS:Living_collection:92 1739 /a

text: Talinopsis frutescens

text: Talinopsis frutescens

text: de Vos, J.M. s.n.; 92 1739 /a (ZSS); 92 1739 /a

text: Talinopsis frutescens


text: Royal Botanic Gardens, Kew

text: public

text: Saldanha, C.

text: not provided

text: unidentified

text: unidentified

text: Saldanha, C. 1125 (K); K001418249

text: Lophopogon tridentatus

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text: Royal Botanic Gardens, Kew

characteristic: INSDC center name

text: public

text: Ambo

text: not provided

text: unidentified

text: unidentified

text: Ambo 6875 (K); K000098722

text: Nanooravia santapaui


text: Cardiff University

text: public

characteristic: INSDC status

text: Post rapid gravity filtration treatment water (filtered)

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text: drinking water metagenome

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text: Cardiff University

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text: Post dissolved air flotation treatment water (clarfied)

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characteristic: geographic location (country and/or sea)

text: drinking water metagenome

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text: Cardiff University

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text: Reservoir water

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text: drinking water metagenome

text: drinking water metagenome


text: Cardiff University

text: public

text: Rapid gravity filtration (RGF) sand media

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text: drinking water metagenome

text: drinking water metagenome


text: Cardiff University

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text: Dissolved air flotation (DAF) sludge

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text: drinking water metagenome

text: drinking water metagenome


text: Cardiff University

text: public

text: Rapid gravity filtration (RGF) granular activated carbon (GAC) media

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text: drinking water metagenome

text: drinking water metagenome


text: Cardiff University

text: public

text: Rapid gravity filtration (RGF) sand biofilm community

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text: drinking water metagenome

text: drinking water metagenome


text: Cardiff University

text: public

text: Rapid gravity filtration (RGF) community extract inoculum for geosmin enrichment experiment

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text: drinking water metagenome

text: drinking water metagenome


text: Cardiff University

text: public

text: Geosmin degrading enrichment experiment day 14 community

text: United Kingdom

text: drinking water metagenome

text: drinking water metagenome


text: Cardiff University

text: public

text: Geosmin degrading enrichment experiment day 62 community

text: United Kingdom

text: drinking water metagenome

text: drinking water metagenome


text: OKPI

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text: Hungary

text: diseased

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text: CLM

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:382-180173

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text: Fecal

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text: South Korea

characteristic: geographic location (latitude)

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characteristic: organism

text: Influence of long-term Antarctica expedition on the gut microbiota according to extreme environmental conditions

characteristic: project name

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text: CLM

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characteristic: SRA accession

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characteristic: Submitter Id

text: Antarctic environment

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text: Metagenome

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characteristic: geographic location (longitude)

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text: CLM

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:382-180175

text: Antarctic environment

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characteristic: title


text: CLM

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:382-180176

text: Antarctic environment

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characteristic: geographic location (country and/or sea)

text: Human

text: metagenome

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characteristic: ENA first public

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:387-180177

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characteristic: ENA-CHECKLIST

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:387-180178

text: Antarctic environment

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:388-180181

text: Antarctic environment

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characteristic: geographic location (latitude)

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:388-180182

text: Antarctic environment

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:388-180183

text: Antarctic environment

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:388-180184

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characteristic: Submitter Id

text: Antarctic environment

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:388-180192

text: Antarctic environment

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characteristic: title


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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:389-180193

text: Antarctic environment

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characteristic: geographic location (country and/or sea)

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characteristic: ENA first public

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characteristic: geographic location (latitude)

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characteristic: project name

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:389-180202

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characteristic: Submitter Id

text: Antarctic environment

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:389-180204

text: Antarctic environment

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:389-180205

text: Antarctic environment

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characteristic: geographic location (longitude)

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text: Antarctic environment

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text: Fecal

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characteristic: INSDC status

text: ena-SAMPLE-TAB-20-05-2024-05:45:29:390-180207

text: Antarctic environment

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text: metagenome

text: Influence of long-term Antarctica expedition on the gut microbiota according to extreme environmental conditions

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:390-180208

text: Antarctic environment

text: Metagenome

characteristic: description

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text: Human

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characteristic: ENA first public

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characteristic: ENA-CHECKLIST

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text: CLM

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text: Antarctic environment

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text: CLM

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text: Antarctic environment

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text: metagenome


text: CLM

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characteristic: Submitter Id

text: Antarctic environment

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text: South Korea

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text: CLM

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text: Antarctic environment

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text: Fecal

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text: ena-SAMPLE-TAB-20-05-2024-05:45:29:397-180309

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text: Influence of long-term Antarctica expedition on the gut microbiota according to extreme environmental conditions

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text: public

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text: Antarctic environment

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text: Fecal

text: South Korea

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characteristic: title


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text: Human

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characteristic: ENA first public

text: CLM

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text: Antarctic environment

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text: Fecal

text: South Korea

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text: metagenome