text: UCL CCM

text: public

text: University College London

text: Environmental WGS isolate

text: United Kingdom

text: North London

text: Enterobacter asburiae

text: Hand Wash Basin Drain

text: Enterobacter asburiae

text: Enterobacter asburiae


status: PUBLIC

characteristic: ENA first public

tag: attribute

characteristic: ENA-CHECKLIST

text: UCL CCM

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: University College London

characteristic: collection date

text: Environmental WGS isolate

characteristic: description

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: North London

characteristic: geographic location (region and locality)

characteristic: host scientific name

text: Citrobacter youngae

characteristic: isolate

text: Hand Wash Basin Drain

characteristic: isolation source host-associated

text: Citrobacter youngae

characteristic: organism

text: Citrobacter youngae

characteristic: title


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Domestic Waste skip; lid; swab

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Drinks Cooler; mixed; Pre-Flush

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Sink drain; U bend exterior; swab

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: WoW; Keyboard and Mouse; swab

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Bathroom; Hand wash basin; Drain swab

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Bathroom; toilet bowl; swab

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Bathroom; toilet floor; swab

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Bay Medication Cupboard; exterior surface; swab

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Bathroom; HWB; Drain swab

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Staff toilet; Hand Wash Basin; drain waste trap

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Sink; drain waste trap;

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Rm 33; SR (Office); Hand Wash Basin; drain waste trap

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Hand Wash Basin; drain waste trap

text: hospital metagenome

text: hospital metagenome


text: UCL CCM

text: public

text: University College London

text: Environemental metagenomic sample

text: United Kingdom

text: North London

text: Bathroom; Hand Wash Basin; drain waste trap

text: hospital metagenome

text: hospital metagenome


text: IRD

text: public

text: France

text: Oryza sativa tropical japonica subgroup

text: Oryza sativa tropical japonica subgroup


text: UMCU

text: public

text: Batch of oligos number 1

text: Netherlands

text: synthetic construct

text: synthetic construct

text: Oligo batch 1


text: UMCU

text: public

text: Batch of oligos number 2

text: Netherlands

text: synthetic construct

text: synthetic construct

text: Oligo batch 2


text: UMCU

text: public

text: Batch of oligos number 3

text: Netherlands

text: synthetic construct

text: synthetic construct

text: Oligo batch 3


text: UMCU

text: public

text: Batch of oligos number 4

text: Netherlands

text: synthetic construct

text: synthetic construct

text: Oligo batch 4


text: UMCU

text: public

text: human

characteristic: common name

text: Wild type RPE-hTERT-DAAO cell line treated with L-Alanine (replicate 1)

text: Netherlands

text: Homo sapiens

text: Homo sapiens


text: UMCU

text: public

text: human

text: Wild type RPE-hTERT-DAAO cell line treated with L-Alanine (replicate 2)

text: Netherlands

text: Homo sapiens

text: Homo sapiens


text: UMCU

text: public

text: human

text: Wild type RPE-hTERT-DAAO cell line treated with D-Alanine (replicate 1)

text: Netherlands

text: Homo sapiens

text: Homo sapiens


text: UMCU

text: public

text: human

text: Wild type RPE-hTERT-DAAO cell line treated with D-Alanine (replicate 2)

text: Netherlands

text: Homo sapiens

text: Homo sapiens


text: UMCU

text: public

text: human

text: P53 KO RPE-hTERT-DAAO cell line treated with L-Alanine (replicate 1)

text: Netherlands

text: Homo sapiens

text: Homo sapiens


text: UMCU

text: public

text: human

text: P53 KO RPE-hTERT-DAAO cell line treated with D-Alanine (replicate 1)

text: Netherlands

text: Homo sapiens

text: Homo sapiens


E-MTAB-14203:Sample 1

text: Vanderbilt University

text: public

text: E-MTAB-14203:Sample 1

unit: day

characteristic: age

text: ArrayExpress

characteristic: broker name

text: CC3 induced pluripotent stem cell

text: not collected

text: human

text: Protocols: The Worthington Papain dissociation kit was used to prepare organoids for single-cell RNA sequencing. Papain, DNAse, and ovomucoid inhibitor powders were re-suspended in Earle’s media according to manufacturer specification. DNAse and papain solutions were gently mixed at a ratio of 1:10, and 1 μL of collagenase solution (100 units / μL in HBSS) was added. 5 - 8 organoids were pooled per well, and organoids were recovered from the hydrogels using collagenase. After washing the recovered organoids, the media wasexchanged for DNAse / papain / collagenase solution. The organoids were then incubated at standard tissue culture conditions (37°C, 5% CO2) for one hour. Afterwards, the organoids were dissociated by gently pipetting with a 1 mL pipette. The organoids were then returned to standard tissue culture conditions for an additional ten minutes. Using a 10 mL pipette, the digested tissue was then homogenized by pipetting up and down ten times. After letting the debris settle, the cell solution (without debris) was transferred to an ovomucoid inhibitor solution (5 mL Earle’s media, 3 mL ovomucoid inhibitor) and spun down for 7 minutes at 300xg to pellet the cells. The supernatant was decanted, and the pellet was resuspended in cold 0.02% BSA in PBS. The cells were then pelleted and washed in 0.02% BSA on ice twice more before finally suspended to a final concentration before processing through the PIPseq method. Neural organoids were generated using the STEMdiff Cerebral Organoid Kit, with modifications. At day 0, iPSCs were aggregated in an ultra-low attachment 96-well plate (Corning / Nexcelcom), 9000 cells / well. Media was changed on days 2, 5, and 7. From days 2 - 7, cerebral organoid media was supplemented with dual-SMAD inhibitors SB43152 (Tocris 16-141-0) and LDN193189 dihydrochloride (Tocris 60-531-0). After embedding in custom biomaterials, organoids were kept in STEMdiff Cerebral Organoid Kit reagents (expansion media, days 7 - 10; maturation media, day 10 onwards) with no further modifications.  Cells were encapsulated using the PIPseq method. The PIPseq manufacturer's guide was then followed for nucleic acid extraction. The PIPseq T2 kit v3 chemistry was used.  The PIPseq manufacturer's guide was then followed for library preparation.

text: not collected

characteristic: growth condition

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Cortical organoid

characteristic: organism part

text: pluripotent stem cell

characteristic: progenitor cell type

text: neural cell

text: Homo sapiens

text: Sample 1


E-MTAB-14203:Sample 2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Vanderbilt University

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: E-MTAB-14203:Sample 2

text: ArrayExpress

text: CC3 induced pluripotent stem cell

text: not collected

text: human

text: not collected

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Cortical organoid

text: pluripotent stem cell

text: neural cell

text: Homo sapiens

text: Sample 2


E-MTAB-14203:Sample 3

text: Vanderbilt University

text: public

text: E-MTAB-14203:Sample 3

characteristic: Submitter Id

text: ArrayExpress

text: CC3 induced pluripotent stem cell

text: not collected

characteristic: collection date

text: human

characteristic: description

text: not collected

characteristic: geographic location (country and/or sea)

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Cortical organoid

text: pluripotent stem cell

text: neural cell

text: Homo sapiens

text: Sample 3


E-MTAB-14203:Sample 4

text: Vanderbilt University

text: public

text: E-MTAB-14203:Sample 4

text: ArrayExpress

text: CC3 induced pluripotent stem cell

text: not collected

text: human

text: not collected

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: Homo sapiens

text: Cortical organoid

text: pluripotent stem cell

text: neural cell

text: Homo sapiens

text: Sample 4


E-MTAB-14203:Sample 5

text: Vanderbilt University

text: public

text: E-MTAB-14203:Sample 5

text: ArrayExpress

text: CC3 induced pluripotent stem cell

text: not collected

text: human

characteristic: common name

text: not collected

text: Matrigel

text: not applicable

text: Homo sapiens

text: Homo sapiens

text: Cortical organoid

text: pluripotent stem cell

text: neural cell

text: Homo sapiens

text: Sample 5

characteristic: title


text: Limnological Institute, University of Konstanz

text: public

text: aquatic biome

characteristic: broad-scale environmental context

unit: m

characteristic: depth

text: lake sedimentary DNA

characteristic: elevation

text: lake sediment

characteristic: environmental medium

text: Germany

unit: DD

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: freshwater biome

characteristic: local environmental context

text: freshwater sediment metagenome

text: Metagenomic reconstruction of prokaryotes and eukaryotes using shotgun sequenced sedimentary ancient DNA in Upper Lake Constance

characteristic: project name

text: freshwater sediment metagenome


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: aquatic biome

text: extraction negative control

text: lake sediment

text: Germany

text: freshwater biome

text: freshwater sediment metagenome

text: freshwater sediment metagenome


Bull

text: KU Leuven

text: public

text: Bull

characteristic: Submitter Id

characteristic: collection date

text: cattle

text: sperm

characteristic: description

text: Belgium

characteristic: geographic location (country and/or sea)

text: Bos taurus

text: Bos taurus

text: Bull


Grandfather

text: KU Leuven

text: public

text: Grandfather

text: cattle

characteristic: common name

text: blood

text: Belgium

text: Bos taurus

characteristic: organism

text: Bos taurus

text: Grandfather

characteristic: title


Grandmother

text: KU Leuven

text: public

text: Grandmother

text: cattle

text: blood

text: Belgium

text: Bos taurus

text: Bos taurus

text: Grandmother


text: KU Leuven

text: public

text: cattle

text: ovary

text: Belgium

text: Bos taurus

text: Bos taurus


text: KU Leuven

text: public

text: cattle

text: sc

text: Belgium

text: Bos taurus

text: Bos taurus


text: KU Leuven

text: public

text: cattle

text: whole blastocyst

text: Belgium

text: Bos taurus

text: Bos taurus


text: KU Leuven

text: public

text: cattle

text: mc

text: Belgium

text: Bos taurus

text: Bos taurus


text: EI

text: public

characteristic: Source Name

text: COPO

characteristic: broker name

text: Jipe tilapia

text: Tanzania

text: Oreochromis jipe

text: Oreochromis jipe


text: EI

text: public

text: COPO

text: Nile tilapia

text: Tanzania

text: Oreochromis niloticus

text: Oreochromis niloticus


text: EI

text: public

text: COPO

text: Mozambique tilapia

text: Israel

text: Oreochromis mossambicus

text: Oreochromis mossambicus


text: EI

text: public

text: COPO

text: Kenya

text: Oreochromis grahami

text: Oreochromis grahami


text: EI

text: public

text: 667ed2f650ee601fac63adcc:sample:E2-K2E10

text: COPO

text: Jipe tilapia

text: Tanzania

text: Oreochromis jipe

text: Oreochromis jipe


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-396951/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: public

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-02-14

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-544650/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA first public

characteristic: ENA-CHECKLIST

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-08-15

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


text: public

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Human

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=3,last_infection_date=2022-01-24

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2020-10-05

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-242610/2021

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-07-18

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-01-10

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-683970/2023

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-01-24

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=3,last_infection_id=hCoV-19/Denmark/DCGC-563954/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=3,last_infection_date=2022-01-31

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-547990/2022

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2021-12-20

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-561009/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-06-27

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-02-28

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-17

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-06-20

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-662629/2023

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-314949/2021

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-03-14

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-292403/2021

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-180071/2021

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

text: public

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-07-11

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-533414/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-01-24

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-07-04

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-10-17

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

characteristic: sample capture status


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-04-11

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=3,last_infection_date=2022-06-20

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-02-14

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-01-17

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-310367/2022

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-02-21

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


characteristic: INSDC center name

text: public

characteristic: INSDC status

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-546047/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-01-10

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2021-12-27

text: not provided

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate


characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Human

text: n_infections=2,last_infection_date=2022-03-21

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: sample capture status


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=3,last_infection_id=hCoV-19/Denmark/DCGC-504805/2022

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: CARI

text: public

text: Southeast Asian liver fluke

characteristic: common name

text: Opisthorchis viverrini

text: Thailand

text: Opisthorchis viverrini

characteristic: organism

text: Opisthorchis viverrini

characteristic: title


NA 29 1

text: GFZ German Research Centre for Geosciences

characteristic: INSDC center name

text: public

text: NA 29 1

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

characteristic: depth

text: DNA extracted from granitic rock core

characteristic: elevation

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: desert biome [ENVO:01000179]

characteristic: local environmental context

text: metagenome

text: Microbial communities and biogeochemical processes in the crystalline deep subsurface of arid and humid ecosystems

characteristic: project name

text: metagenome

text: Humid site 19 m


NA 29 2

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NA 29 2

characteristic: Submitter Id

text: terrestrial biome [ENVO:00000446]

characteristic: collection date

text: DNA extracted from granitic rock core

characteristic: description

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (country and/or sea)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Humid site 19 m


NA 29 3

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: NA 29 3

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: organism

text: metagenome

text: Humid site 19 m


NA 39-0 1

characteristic: INSDC center name

text: public

text: NA 39-0 1

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Humid site 31 m

characteristic: title


NA 39-0 3

text: public

text: NA 39-0 3

text: terrestrial biome [ENVO:00000446]

characteristic: depth

text: DNA extracted from granitic rock core

characteristic: elevation

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Humid site 31 m


NA 39-18 1

text: public

text: NA 39-18 1

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: desert biome [ENVO:01000179]

characteristic: local environmental context

text: metagenome

text: metagenome

text: Humid site 31.5 m


NA 39-18 2

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NA 39-18 2

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: project name

text: metagenome

text: Humid site 31.5 m


NA 41 1

text: public

text: NA 41 1

characteristic: Submitter Id

text: terrestrial biome [ENVO:00000446]

characteristic: collection date

text: DNA extracted from granitic rock core

characteristic: description

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Humid site 34 m


NA 41 2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: NA 41 2

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (country and/or sea)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Humid site 34 m


NA 41 3

characteristic: INSDC center name

text: public

text: NA 41 3

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: organism

text: metagenome

text: Humid site 34 m


AZ 11 1

text: public

text: AZ 11 1

text: terrestrial biome [ENVO:00000446]

characteristic: depth

text: DNA extracted from granitic rock core

characteristic: elevation

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Arid site 12 m

characteristic: title


AZ 24 1

text: public

text: AZ 24 1

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Arid site 26 m


AZ 24 2

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AZ 24 2

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

characteristic: local environmental context

text: metagenome

text: metagenome

text: Arid site 26 m


AZ 24 3

text: public

text: AZ 24 3

characteristic: Submitter Id

text: terrestrial biome [ENVO:00000446]

characteristic: collection date

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: project name

text: metagenome

text: Arid site 26 m


AZ 3 1

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: AZ 3 1

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

characteristic: description

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Arid site 1.5 m


AZ 3 2

characteristic: INSDC center name

text: public

text: AZ 3 2

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (country and/or sea)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Arid site 1.5 m


AZ 3 3

text: public

text: AZ 3 3

text: terrestrial biome [ENVO:00000446]

characteristic: depth

text: DNA extracted from granitic rock core

characteristic: elevation

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: organism

text: metagenome

text: Arid site 1.5 m


AZ 46 3

text: public

text: AZ 46 3

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

characteristic: geographic location (latitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Arid site 55 m

characteristic: title


DC NA 7

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DC NA 7

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from a filter covering 15-20 ml liner fluid

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (longitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Liner fluid NA core run 7


DC AZ 3

text: public

text: DC AZ 3

characteristic: Submitter Id

text: terrestrial biome [ENVO:00000446]

characteristic: collection date

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

characteristic: local environmental context

text: metagenome

text: metagenome

text: Liner fluid AZ core run 3


DC AZ 11

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: DC AZ 11

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: project name

text: metagenome

text: Liner fluid AZ core run 11


DC AZ 24

characteristic: INSDC center name

text: public

text: DC AZ 24

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

characteristic: description

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Liner fluid AZ core run 24


DC AZ 36

text: public

text: DC AZ 36

text: terrestrial biome [ENVO:00000446]

characteristic: depth

characteristic: elevation

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (country and/or sea)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Liner fluid AZ core run 36


DC AZ 46

text: public

text: DC AZ 46

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

characteristic: geographic location (latitude)

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: organism

text: metagenome

text: Liner fluid AZ core run 46


DC AZ 72

text: public

characteristic: INSDC status

characteristic: SRA accession

text: DC AZ 72

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Liner fluid AZ core run 72

characteristic: title


NA WT 1

text: public

text: NA WT 1

characteristic: Submitter Id

text: terrestrial biome [ENVO:00000446]

characteristic: collection date

text: DNA extracted from a filter covering 50 ml of water which was later used for the liner fluid

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (longitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: NA Water tank 1


NA WT 2

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: NA WT 2

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

characteristic: local environmental context

text: metagenome

text: metagenome

text: NA Water tank 2


NA WT 3

characteristic: INSDC center name

text: public

text: NA WT 3

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: project name

text: metagenome

text: NA Water tank 3


NA WT 4

text: public

text: NA WT 4

text: terrestrial biome [ENVO:00000446]

characteristic: depth

characteristic: description

characteristic: elevation

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: NA Water tank 4


NA WT 5

text: public

text: NA WT 5

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: NA Water tank 5


AZ WT 1

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AZ WT 1

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: organism

text: metagenome

text: AZ Water tank 1


AZ WT 2

text: public

text: AZ WT 2

characteristic: Submitter Id

text: terrestrial biome [ENVO:00000446]

characteristic: collection date

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: AZ Water tank 2

characteristic: title


AZ WT 3

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: AZ WT 3

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (longitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: AZ Water tank 3


AZ WT 4

characteristic: INSDC center name

text: public

text: AZ WT 4

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

characteristic: local environmental context

text: metagenome

text: metagenome

text: AZ Water tank 4


AZ WT 5

text: public

text: AZ WT 5

text: terrestrial biome [ENVO:00000446]

characteristic: depth

characteristic: description

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: project name

text: metagenome

text: AZ Water tank 5


47 NA 39

text: public

text: 47 NA 39

text: terrestrial biome [ENVO:00000446]

characteristic: elevation

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

characteristic: geographic location (country and/or sea)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Liner fluid NA core run 39


39 NA 17

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 39 NA 17

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (latitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Liner fluid NA core run 17


43 NA 29

text: public

text: 43 NA 29

characteristic: Submitter Id

text: terrestrial biome [ENVO:00000446]

characteristic: collection date

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: organism

text: metagenome

text: Liner fluid NA core run 29


AZ 24-46 control

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: AZ 24-46 control

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from extraction reagents without template

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: DNA extraction control AZ 24 and 46

characteristic: title


AZ 11-36 control

characteristic: INSDC center name

text: public

text: AZ 11-36 control

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (longitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: DNA extraction control AZ 11 and 36


NA 7-39 control

text: public

text: NA 7-39 control

text: terrestrial biome [ENVO:00000446]

characteristic: depth

characteristic: description

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

characteristic: local environmental context

text: metagenome

text: metagenome

text: DNA extraction control NA 7 and 39


NA 41-29 control

text: public

text: NA 41-29 control

text: terrestrial biome [ENVO:00000446]

characteristic: elevation

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: project name

text: metagenome

text: DNA extraction control NA 41 and 29


PCR 1

text: public

characteristic: INSDC status

characteristic: SRA accession

text: PCR 1

text: terrestrial biome [ENVO:00000446]

text: PCR reaction with MilliQ instead of DNA template

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (country and/or sea)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: PCR negative control core samples


PCR 2

text: public

text: PCR 2

characteristic: Submitter Id

text: terrestrial biome [ENVO:00000446]

characteristic: collection date

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (latitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: PCR negative control core samples


PCR 3

characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: PCR 3

text: terrestrial biome [ENVO:00000446]

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: organism

text: metagenome

text: PCR negative control core samples


controls PCR negative

characteristic: INSDC center name

text: public

text: controls PCR negative

text: terrestrial biome [ENVO:00000446]

characteristic: broad-scale environmental context

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: PCR negative control DC and WT controls

characteristic: title


NA 39.0 1-21

text: public

text: NA 39.0 1-21

text: terrestrial biome [ENVO:00000446]

characteristic: depth

text: DNA extracted from granitic rock core

characteristic: description

text: rock [ENVO:00001995]

text: Chile

characteristic: geographic location (longitude)

text: desert biome [ENVO:01000179]

text: metagenome

text: metagenome

text: Humid site 31 m


AZ 3 1-21

text: public

text: AZ 3 1-21

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

characteristic: elevation

text: rock [ENVO:00001995]

characteristic: environmental medium

text: Chile

text: desert biome [ENVO:01000179]

characteristic: local environmental context

text: metagenome

text: metagenome

text: Arid site 1.5 m


AZ 24 1-21

text: public

characteristic: INSDC status

characteristic: SRA accession

text: AZ 24 1-21

text: terrestrial biome [ENVO:00000446]

text: DNA extracted from granitic rock core

text: rock [ENVO:00001995]

text: Chile

text: desert biome [ENVO:01000179]

text: metagenome

characteristic: project name

text: metagenome

text: Arid site 26 m


text: NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

text: public

characteristic: Submitter Id

characteristic: collection date

text: Portugal

characteristic: geographic location (country and/or sea)

text: Ear swab

text: Haemophilus influenzae

text: Haemophilus influenzae

text: NT

characteristic: serotype


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: public

text: Portugal

text: blood

text: Haemophilus influenzae

characteristic: organism

text: Haemophilus influenzae

text: NT


characteristic: INSDC center name

text: public

text: Portugal

text: Bronchoalveolar lavage

text: Haemophilus influenzae

text: Haemophilus influenzae

text: NT

characteristic: title


text: public

text: Portugal

text: blood

text: Haemophilus influenzae

text: Haemophilus influenzae

text: A


text: public

text: Portugal

text: bronchial secretions

text: Haemophilus influenzae

text: Haemophilus influenzae

text: NT


text: public

text: Portugal

text: blood

text: Haemophilus influenzae

text: Haemophilus influenzae

text: E


text: public

text: Portugal

text: nasopharyngeal aspirate

text: Haemophilus influenzae

text: Haemophilus influenzae

text: NT


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

text: Department of Biology, University of Graz, Austria

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: Department of Biology, University of Graz, Austra

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: WHOLE ORGANISM

characteristic: organism part

text: ERGA

text: host fish (Salmo trutta) caught with gill net by commercial fisherman. Fresh fish transported in cooling box to University of Graz where fish was dissected and tapeworms were extracted from the gut. Lentil sized pieces of tissue cut off the live worms and placed into sampling tubes.

characteristic: sample collection method

text: CHRISTOPH HAHN

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Eubothrium crassum

text: NOT COLLECTED

characteristic: sex

text: ERGA CH 4793 00006

text: 2f6b60c6-bc2c-4ac5-907a-2395d6a9b033-ERGA-specimen

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

characteristic: geographic location (longitude)

text: Hallstaetter See

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: WHOLE ORGANISM

text: ERGA

characteristic: project name

text: CHRISTOPH HAHN

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00005

text: a3a387d6-fe13-4b45-a85b-df24aa410412-ERGA-specimen

characteristic: title


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: WHOLE ORGANISM

characteristic: organism part

text: ERGA

characteristic: sample collection method

text: CHRISTOPH HAHN

characteristic: sample coordinator

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00004

text: d630b0a7-8261-46e7-a6af-ae836cafaa7a-ERGA-specimen


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

text: WHOLE ORGANISM

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Eubothrium crassum

text: NOT COLLECTED

characteristic: sex

text: ERGA CH 4793 00003

text: 028ad3cb-8b1c-4afd-963e-79340b864754-ERGA-specimen

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: NOT PROVIDED

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: WHOLE ORGANISM

text: ERGA

characteristic: project name

text: CHRISTOPH HAHN

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00002

text: 6bd98dad-389b-4dec-bd79-f63a025999df-ERGA-specimen

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: NOT PROVIDED

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: WHOLE ORGANISM

characteristic: organism part

text: ERGA

characteristic: sample collection method

text: CHRISTOPH HAHN

characteristic: sample coordinator

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00001

text: ec14c5ef-4570-4f2b-938c-e5ed41b9c1ee-ERGA-specimen


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 06-4

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

characteristic: sample derived from

text: Eubothrium crassum

text: NOT COLLECTED

characteristic: sex

text: ERGA CH 4793 00006

text: NOT PROVIDED

text: ad537bf4-5f4a-45ae-8523-28a2c0fcfbbe-erga

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 06-3

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

characteristic: organism

text: POSTERIOR BODY

text: ERGA

characteristic: project name

text: CHRISTOPH HAHN

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00006

text: NOT PROVIDED

text: df3d5623-cabe-4fc3-8be0-b1f45838be67-erga

characteristic: title


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 06-2

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

text: POSTERIOR BODY

characteristic: organism part

text: ERGA

characteristic: sample collection method

text: CHRISTOPH HAHN

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00006

text: NOT PROVIDED

text: f9c9e602-e051-40d7-8adb-d9d9d981a4d9-erga


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 06-1

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample derived from

text: Eubothrium crassum

text: NOT COLLECTED

characteristic: sex

text: ERGA CH 4793 00006

text: NOT PROVIDED

text: 1dfee29c-40a5-40b4-b55d-3fda5a376894-erga

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 05-3

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: POSTERIOR BODY

characteristic: organism part

text: ERGA

characteristic: project name

characteristic: sample collection method

text: CHRISTOPH HAHN

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00005

text: NOT PROVIDED

text: 38877941-a226-4927-860c-56b5c8df5212-erga

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 05-2

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00005

text: NOT PROVIDED

text: 0309bbe6-bebd-4309-a3a1-f86850c2ffc3-erga


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 05-1

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: POSTERIOR BODY

characteristic: organism part

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample derived from

text: Eubothrium crassum

text: NOT COLLECTED

characteristic: sex

text: ERGA CH 4793 00005

text: NOT PROVIDED

text: def8bc53-d890-4b7e-8226-a4a2bb7e1ea3-erga

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 04-3

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

characteristic: project name

characteristic: sample collection method

text: CHRISTOPH HAHN

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00004

text: NOT PROVIDED

text: e895ebb1-127e-437c-bbbd-a6e616e70692-erga

characteristic: title


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 04-2

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

text: Department of Biology, University of Graz, Austria

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: POSTERIOR BODY

characteristic: organism part

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00004

text: NOT PROVIDED

text: ccc8b66e-9e3f-4a0b-9ed1-776390f3addf-erga


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 04-1

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: Department of Biology, University of Graz, Austra

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

text: host fish (Salmo trutta) caught with gill net by commercial fisherman. Fresh fish transported in cooling box to University of Graz where fish was dissected and tapeworms were extracted from the gut. Lentil sized pieces of tissue cut off the live worms and placed into sampling tubes.

text: CHRISTOPH HAHN

characteristic: sample derived from

text: Eubothrium crassum

text: NOT COLLECTED

characteristic: sex

text: ERGA CH 4793 00004

text: NOT PROVIDED

text: 3ba7988a-a06e-4a81-a61e-8ae4f18597ac-erga

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 03-3

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: POSTERIOR BODY

characteristic: organism part

text: ERGA

characteristic: project name

characteristic: sample collection method

text: CHRISTOPH HAHN

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00003

text: NOT PROVIDED

text: c5608074-31b4-4dbe-99eb-e32d3e98632b-erga

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 03-2

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00003

text: NOT PROVIDED

text: fae6c75c-30e0-4196-b18d-25e23b6faf0a-erga


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 03-1

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: POSTERIOR BODY

characteristic: organism part

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample derived from

text: Eubothrium crassum

text: NOT COLLECTED

characteristic: sex

text: ERGA CH 4793 00003

text: NOT PROVIDED

text: 1dfaeb8c-fecd-4419-9bb7-7ece19cf47db-erga

characteristic: tolid


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 02-4

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

characteristic: project name

characteristic: sample collection method

text: CHRISTOPH HAHN

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00002

text: NOT PROVIDED

text: 63e3ce21-033a-42f6-9d36-7a9999b66877-erga

characteristic: title


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 02-3

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: POSTERIOR BODY

characteristic: organism part

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00002

text: NOT PROVIDED

text: 7aa019e4-f92c-4558-8f94-0681184b3ef7-erga


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 02-2

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample derived from

text: Eubothrium crassum

text: NOT COLLECTED

characteristic: sex

text: ERGA CH 4793 00002

text: NOT PROVIDED

text: e37f6e3b-4d87-4d51-b926-921710e9efa5-erga

characteristic: tolid


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 02-1

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

text: freshwater lake

text: CHRISTOPH HAHN

text: adult

text: Eubothrium crassum

characteristic: organism

text: POSTERIOR BODY

characteristic: organism part

text: ERGA

characteristic: project name

characteristic: sample collection method

text: CHRISTOPH HAHN

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00002

text: NOT PROVIDED

text: 86454840-93fc-4516-a780-aa42b19da945-erga

characteristic: title


characteristic: ENA first public

characteristic: ENA-CHECKLIST

text: Sanger Institute

text: EcSt HAL 2024 01-3

text: EarlhamInstitute

characteristic: INSDC center name

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NOT PROVIDED

text: COPO

text: Christoph Hahn

characteristic: collection date

text: Austria

characteristic: geographic location (country and/or sea)

text: Hallstaetter See

text: freshwater lake

characteristic: habitat

text: CHRISTOPH HAHN

text: adult

characteristic: lifestage

text: Eubothrium crassum

text: POSTERIOR BODY

text: ERGA

text: CHRISTOPH HAHN

characteristic: sample coordinator

characteristic: sample coordinator ORCID ID

characteristic: sample coordinator affiliation

text: Eubothrium crassum

text: NOT COLLECTED

text: ERGA CH 4793 00001

text: NOT PROVIDED

text: ab089749-e34f-451b-99bb-a2d2af92b096-erga


text: Sanger Institute

characteristic: GAL

text: EcSt HAL 2024 01-2

text: EarlhamInstitute

text: public

text: NOT PROVIDED

text: COPO

characteristic: broker name

text: Christoph Hahn

characteristic: collecting institution

characteristic: collector ORCID ID

characteristic: depth

text: Austria

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Hallstaetter See

characteristic: geographic location (region and locality)

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characteristic: organism

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characteristic: organism part

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characteristic: sample derived from

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characteristic: sex

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text: NOT PROVIDED

text: 8c6fbbae-09aa-4b9f-9f5d-dd68b4930a4f-erga

characteristic: tolid


characteristic: ENA first public

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text: Hallstaetter See

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characteristic: project name

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text: dcea1807-266e-48fd-bff9-703f5295f31c-erga

characteristic: title


text: Anthony Smith, NICD

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text: A. Smith, National Institute for Communicable Diseases

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characteristic: description

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characteristic: geographic location (region and locality)

text: Human, Blood culture

text: Salmonella enterica

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text: Salmonella enterica

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characteristic: collector name

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characteristic: geographic location (country and/or sea)

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text: Christoph Ort, Tamar Kohn, Timothy R. Julian, Lea Caduff, Seju Kang, Ayazhan Dauletova, Camille Hablützel, Rachel McLeod, Daniela Yordanova, Jolinda de Korne, Charlie Gan, Catharine Aquino, Lennart Opitz, Tim Sykes, Katharina Jahn, Pelin Burcak Icer, David Dreifuss, Ivan Topolsky, Lara Fuhrmann, Kim Philipp Jablonski, Anika John, Matteo Carrara, Franziska Singer, Chaoran Chen, Sarah Nadeau, Niko Beerenwinkel, Tanja Stadler

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characteristic: title


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characteristic: External Id

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characteristic: INSDC first public

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characteristic: NCBI submission model

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characteristic: cell line

text: missing

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text: BatchA_water extract of Paeoniae Radix (Low dose)_rep2

text: Paeoniae Radix water extract 20 microg/mL

characteristic: treatment


text: Korean Institute of Oriental Medicine

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text: live

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characteristic: title

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text: Korean Institute of Oriental Medicine

text: live

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text: missing

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text: BatchA_water extract of Paeoniae Radix (High dose)_rep2

text: Paeoniae Radix water extract 500 microg/mL


text: Korean Institute of Oriental Medicine

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text: BatchA_water extract of Angelicae Gigantis Radix (Low dose)_rep2

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text: Korean Institute of Oriental Medicine

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text: missing

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text: Homo sapiens

text: BatchA_water extract of Panax Ginseng (Low dose)_rep3

text: Panax Ginseng water extract 20 microg/mL