title: Agilent-040666 Guinea Pig Array v1.2 (Feature Number version)
status: Public on Aug 10 2014
contact.city: Liverpool
contact.first: Peter
contact.last: Davidsen
contact.email: pkdavidsen@gmail.com
contact.state: Merseyside
contact.address: Crown Street
contact.country: United Kingdom
contact.institute: University of Liverpool
organism: Cavia porcellus
description: Guinea Pig Array based on RNA-seq and Cavia porcellus 3 genome. Probes with FF_0 have been confirmed. FF_1-4 are untested with 1 and 2 being specific for the sequence, 3 and 4 are sequences for genes were no specific sequence could be found.
  
  Arrays of this design have barcodes that begin with 16040666 or 2540666.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Feature Extraction feature number.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/