title: [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array (mogene10st_annotation.csv)
status: Public on Jun 19 2014
contact.city: Mannheim
contact.first: Johanna
contact.middle: Daniela
contact.last: Schott
contact.email: johanna.schott@medma.uni-heidelberg.de
contact.address: Franz-Volhard-Straße 6
contact.department: Mannheim Institute for Innate Immunoscience
contact.country: Germany
contact.institute: Heidelberg University
organism: Mus musculus
description: Probe sequences of pm probes were retrieved using the Bioconductor packages oligo (version 1.22.0) and pd.mogene.1.0.st.v1. Probes were mapped to the mouse RefSeq transcriptome as downloaded from the UCSC Genome Browser mm10 refGene table on February 5, 2013. Probes that match transcripts of more than one gene (as defined by a common gene symbol) were excluded. For mapping and further processing of probe information, the Bioconductor packages seqinr and Biostrings and in-house developed Perl scripts were used.
manufacture_protocol: See manufacturer's web site