title: Agilent-073391 MicroTOOLs_171K_oligo_v2.0
status: Public on Dec 12 2017
contact.city: Santa Cruz
contact.first: Jonathan
contact.middle: David
contact.last: Magasin
contact.email: jmagasin@ucsc.edu
contact.state: CA
contact.address: 1156 High Street
contact.department: Ocean Sciences
contact.country: USA
contact.institute: UC Santa Cruz
organism: uncultured marine microorganism
description: MicroTOOLs v2.0 is based on the original platform (GPL16706) described in Shilova et al. (2014).  However, v2.0 is an Agilent platform (Agilent-073391). It also has some additional targets and updated taxonomic annotation, based on sequences added to reference databases since the original platform.  Additionally, a software pipeline was developed for analyzing MicroTOOLs microarrays and is available at https://www.jzehrlab.com/microtools
  The probe sequences are provided in the file MicroTOOLs_171K_oligo_v2.0_probes.txt available at the foot of this page.
manufacture_protocol: Probe genes were selected using known molecular markers and metagenomic data, and oligonucleotide probes were designed using Agilent eArray design software.  Microarray manufacture protocol described at http://www.agilent.com