title: 100520_MM9_KF_Meth_HX3  HELP promoter
status: Public on Apr 10 2018
contact.city: Barcelona
contact.first: Ana
contact.last: Sevilla
contact.email: anasevilla@ub.edu
contact.state: Barcelona
contact.address: Avda Diagonal 643. Edificio Malagef 4rd Floor, Faculty of Biology
contact.department: Departamento de Biologia Celular, Fisiologia e Inmunologia
contact.country: Spain
contact.institute: Universidad de Barcelona
contact.phone: +34 675348398
organism: Mus musculus
description: We used the HELP mouse promoter arrays MM9_HX3 on a 720K platform which is designed to cover 117,000 HpaII amplifiable fragments (genomic sequences between two flanking HpaII sites 200-2,000 bp apart) within CpG islands and promoters of the well characterized RefSeq genes derived from the UCSC RefFlat files (http://www.nimblegen.com/)
  Custom DNA methylation microarray 100520_ MM9_KF_Meth_HX3  for the HELP assay, cat number 05924553001. The .ndf and .ngd files are linked below as supplementary files.
  100520_MM9_KF_Meth.ndf
  100520_MM9_KF_Meth.pos
manufacture_protocol: see manufacturer's web site www.nimblegen.com