title: Agilent-066414 Daphnia magna 180k v2
status: Public on Apr 01 2017
contact.city: Barcelona
contact.first: Bruno
contact.last: Campos
contact.email: brunocampus@gmail.com
contact.address: jordi girona, 18, 18
contact.department: Environmental Chemistry
contact.country: Spain
contact.institute: IDAEA-CSIC
organism: Daphnia magna
description: Please note that the gene identifier in the accession string refers to a set of gene models generated by the Daphnia magna Genome consortium;
  http://server7.wfleabase.org/prerelease3/Daphnia_magna/gene-predictions/daphmagna_201208a9/
  however, they are not yet publicly available as of this moment.
  
  The '066414_180K_annotation.xlsx' file contains a full annotation of these gene models, by BLAST to several databases, REFSEQ, Flybase, Swissprot.
  
  The 'daphnia_magna_gene_models_finals_fasta' file contains the gene name and respective sequence
  
  Arrays of this design have barcodes that begin with 16066414 or 2566414.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Probe Name.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/