title: Systemix Institute Arabodpsis miRNA target high resolution 126K 36mer tiling array
status: Public on Apr 10 2009
contact.city: Los Altos
contact.first: Manoj
contact.last: Samanta
contact.email: manoj.samanta@systemix.org
contact.state: CA
contact.address: 2240 Homestead Court #309
contact.country: USA
contact.institute: Systemix Institute
contact.phone: 408-472-7927
organism: Arabidopsis thaliana
description: Custom array was designed with 15,000 36-mer oligonucleotide probes tiling 200 base upstream and downstream (3 n.t. resolution) of miRNA target sites in
  Arabidopsis thaliana. TAIR8 chromosome version was used in the design (chr1 = NC_003070.6, chr2 = NC_003071.4, chr3 = NC_003074.5, chr4 = NC_003075.4, chr5 = NC_003076.5).
  The 22 target genes on the arrays were chosen based on the abundance of associated smRNAs that mapped to the loci, the amplitude of the antisense transcription signals in published whole genome tiling microarray experiments and a representative cross section of miRNA families.
  
manufacture_protocol: Agilent inkjet technology