title: NimbleGen T. erythraeum IMS101 expression plus tiling of intergenic regions 4x72K array [080610_Trich_erth_UCSC_TS_expr]
status: Public on Jun 11 2017
contact.city: Xiamen
contact.first: Tuo
contact.last: Shi
contact.email: tuoshi99@gmail.com
contact.state: Fujian
contact.address: No. 1 South Xiang'an Rd.
contact.country: China
contact.institute: Xiamen University
organism: Trichodesmium erythraeum IMS101
description: NimbleGen design name 080610_Trich_erth_UCSC_TS_expr, NimbleGen design ID 7738. A whole genome ORF-based expression design for 4788 genes from Trichodesmium erythraeum IMS101 with up to six 60-mer probes per gene, plus tiling of 60-mer probes at a 150-bp interval for intergenic regions >60bp in length. Each ORF-based probe is replicated 2 times. The design includes random GC and other control probes. The final microarray slides were printed in 4-plex (4x72K) format.
  The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features. The .ndf and .ngd files are linked below as supplementary files.
  GenBank accession number of Trichodesmium erythraeum IMS101 = NC_008312
manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.