title: Agilent-047432 eco_k12_mg1655_23bp 047431
status: Public on Jul 22 2014
contact.city: Seattle
contact.first: Aaron
contact.last: Brooks
contact.email: brooksan@uw.edu
contact.state: WA
contact.address: 401 Terry Avenue North
contact.country: USA
contact.institute: Institute for Systems Biology
organism: Escherichia coli
description: E coli K12 MG1655 tiling array, 23bp sliding window. Includes >10,000 probes surrounding predicted operon break sites, 6 bp resolution
  
  Arrays of this design have barcodes that begin with 16047432 or 2547432.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Feature Extraction feature number.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/