title: IRCGP Canine 720K v1.0
status: Public on Jul 31 2013
contact.city: seoul
contact.first: SeungHyun
contact.last: Jung
contact.email: hyun@catholic.ac.kr
contact.state: seoul
contact.address: catholic university, medical college, banpo-dong
contact.department: Department of Biochemistry
contact.country: South Korea
contact.institute: Catholic University of Korea
contact.phone: 82-2-2258-7509
organism: Canis lupus familiaris
description: 1. We used a NimbleGen custom 720K canine whole-genome array platform (Roche NimbleGen, Penzberg, Germany), designed from the UCSC dog genome build of May 2005 (Broad/canFam2).
  2. This array is comprised of 385,000 probes evenly distributed throughout the unique sequence of the genome as a backbone and an additional ~330,000 probes which were designed based on previously reported dog CNV regions.
  3. The average probe spacing for our custom array platform was ~3.3 Kb.
  4. The array-CGH experiments were performed according to the manufacturer’s instructions.
manufacture_protocol: see manufacturer's web site www.nimblegen.com