title: 017617 IMUL-Candida glabrata 8x15k [Probe name version]
status: Public on Jul 23 2016
contact.city: Bethesda
contact.first: GEO
contact.last: admin
contact.email: geo@ncbi.nlm.nih.gov
contact.state: MD
contact.address: 9000 Rockville Pike
contact.country: USA
contact.institute: NCBI/NLM/NIH
organism: Nakaseomyces glabratus CBS 138
description: The nucleotide sequences of the 5283 C. glabrata ORFs and the mitochondrial genome (release 2) were downloaded from the Génolevure Consortium (http://www.genolevures.org/). Following the Agilent eArray Design guidelines, two separate probe sets for each ORF were designed, each consisting of 60 base oligonucleotides. The probe selection was performed using the GE Probe Design Tool; probes were filtered following their base composition and distribution, cross-hybridization potential and melting temperature to yield two probes sets representing each 5210 nuclear and 6 mitochondrial ORFs. These probes cover more than 98% of the nuclear genome and represent 6 out of the 8 mitochondrial protein-encoding genes. For quality control and normalization purposes, 103 probes were selected randomly and spotted 20 times throughout each array in addition to standard Agilent controls. C. glabrata custom arrays were manufactured in the 8x15k format by Agilent Technologies.
  Design ID 017617
manufacture_protocol: see manufacturer's web site: http://www.agilent.com/