title: 2007-03-13_Henikoff_Dros_ChIP_1
status: Public on Sep 03 2010
contact.city: Montpellier
contact.first: Giacomo
contact.last: Cavalli
contact.email: itys.comet@bric.ku.dk, benjamin.leblanc@igh.cnrs.fr, frederic.bantignies@igh.cnrs.fr, giacomo.cavalli@igh.cnrs.fr
contact.address: 141 rue de la Cardonille
contact.country: France
contact.institute: Institute of Human Genetics
contact.phone: 33(0)434359970
organism: Drosophila melanogaster
description: Tiling array mapping euchromatic regions of the Drosophila melanogaster genome (Flybase release 4). Chip 1 of 3 of a NimbleGen platform (DesignID=5385) originally designed by Henikoff and Mito (GEO accession: GPL3352).
  Whole chromosome 3R mapped with 219005 isothermal probes with an average oligonucleotide length of 50bp and an average inter-oligo spacing of 120bp. The 3R chromosome sequence was unchanged from FlyBase release 4 to FlyBase release 5 and thus release 4 coordinates also corresponds to release 5 coordinates  for this chromosome.
  Other probes provide dense tiling of Chr 2L proximal, Chr X proximal and distal, first part of Chr 4, and Bithorax complex (BXC1).
manufacture_protocol: http://www.nimblegen.com/products/chip/index.html