title: MSU/McDermott_Cmerolae_12x135K_v1.0
status: Public on Mar 31 2013
contact.city: Bozeman
contact.first: Kate
contact.last: McInnerney
contact.email: kmcinnerney@montana.edu
contact.state: MT
contact.address: 109 Lewis Hall
contact.department: Microbiology
contact.country: USA
contact.web_link: http://cores.montana.edu
contact.institute: Montana State University
contact.phone: 406-994-5666
organism: Cyanidioschyzon merolae
description: NimbleGen design name: 110204_Cmerolae_DS_exp_HX12; order # 32590.
  Native array description file: 110204_Cmerolae_DS_exp_HX12.ndf
  Native array description file: 110204_Cmerolae_DS_exp_HX12.ngd
  
  Design includes 6,699 genes from two ecologically relevant isolates originating from Dragon Spring (CCMEE isolate 5508) and Lemonade Creek (CCMEE isolate 5578), sequences from the C. merolae strain 10D reference genome, and coding regions identified in two cDNA pyrosequencing libraries derived from Dragon Spring Cyanidiales mat material.
  
  A set of five 60-mer probes represent each gene (for nearly all genes). Each probe is replicated in four distinct blocks on the array. The design includes random GC and other control probes.
manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.