title: Operon E. coli Custom 3.8K 55156017 array
status: Public on Jan 15 2011
contact.city: Wuerzburg
contact.first: Jaroslaw
contact.last: Zdziarski
contact.email: jaroslaw.zdziarski@mail.uni-wuerzburg.de
contact.address: Josef-Schneider Str. 2/Bau D15
contact.department: Institut fuer Molekulare Infektionsbiologie
contact.country: Germany
contact.institute: Universitaet Wuerzburg
contact.phone: 09313182130
organism: Escherichia coli
description: Complete genomes of six Escherichia coli strains (6 genomes and four plasmids). The number of open reading frames (ORFs) or genes represented is as follows: 4269 ORFs of non-pathogenic E. coli K-12strain MG1655, 5306 ORFs of enterohemorrhagic E. coli O157:H7 strain EDL933, 5251 ORFs of enterohemorrhagic E. coli O157:H7 strain Sakai, 5366 ORFs of uropathogenic E. coli strain CFT073, 322 ORFs of uropathogenic E. coli strain 536, 448 ORFs of uropathogenic E. coli strain UTI89, 3 genes of EHEC plasmid OSAK1, 10 genes of EHEC plasmid pO157_Sakai, 97 genes of EHEC plasmid pO157_EDL933 and genes of UPEC plasmid pUTI89. In addition, the array comprises also a number of positive and negative controls.
manufacture_protocol: The array area is 18mm wide, 54mm long, and is located 8mm from the top of the slide (barcode at bottom). Probes are spotted as single spots in 32 blogs (4 columns, 8 rows), each blog with 18 columns x 19 rows.