title: NimbleGen Aedes aegypti 12plex array [090305_Aedes_aegypti_TEfam_expr]
status: Public on Apr 04 2014
contact.city: Columbia
contact.first: Susanta
contact.middle: K.
contact.last: Behura
contact.email: behuras@missouri.edu
contact.state: Missouri
contact.address: 920 East Campus Drive
contact.department: Division of Animal Sciences
contact.country: USA
contact.institute: Univeristy of Missouri
organism: Aedes aegypti
description: design name: 090305_Aedes_aegypti_TEfam_expr
  DESIGN_ID: 9290
  
  An expression design for 17,494 genes/transposable_ORFs from Aedes aegypti with fourteen 60-mer probe pairs (PM/MM) per gene.  Each probe is replicated 3 times.  The design includes random GC and other control probes.
  The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features.  The .ndf and .ngd files are linked below as supplementary files.
  
  The SEQ_IDs are VectorBase GeneID number for the ORF to which the indicated probe is directed. Transposable element ORF to which the indicated probe is directed. These ORFs were predicted from the genome sequences of Aedes aegypti [PMID 17510324].
  
  native array description file: 090305_Aedes_aegypti_TEfam_expr.ndf
  native array description file: 090305_Aedes_aegypti_TEfam_expr.ngd
manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.