title: Agilent-084107 048306On1M_V3 082895 [PROBE NAME VERSION]
status: Public on Nov 04 2017
contact.city: Hannover
contact.first: Oliver
contact.last: Dittrich-Breiholz
contact.email: dittrich.oliver@mh-hannover.de
contact.address: Carl-Neuberg-Str. 1
contact.department: Research Core Unit Genomics
contact.country: Germany
contact.institute: Medical School Hannover
organism: Mus musculus
description: This platform for Agilent Design ID 084107 represents a refined version of the Agilent Whole Mouse Genome Oligo Microarray 4x44K v2 (Design ID 026655) comprised of all probes of this array in quadruplicates, but a different number of custom control probes. ID-084107 (048306On1M_V3) was developed by RCUG, using a 1x1M design format. All non-control probes of design ID 026655 were printed four times within a region comprising a total of 181560 Features. Four of such regions were placed within one 1M region.
  
  Arrays of this design have barcodes that begin with 16084107 or 2584107.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Feature Extraction feature number.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/