title: Agilent-022565 Human Thal array v1 tiling array (Feature number version)
status: Public on May 04 2015
contact.city: Seattle
contact.first: Daniel
contact.middle: E
contact.last: Sabath
contact.email: dsabath@uw.edu
contact.state: WA
contact.address: Box 359743
contact.department: Laboratory Medicine
contact.country: USA
contact.institute: University of Washington
contact.phone: 206-897-5215
organism: Homo sapiens
description: Thalassemia array: HD tiling of alpha and beta globin loci (60 bp spacing). Remainder of chr11 and chr16 tiled at lower density. Genome tiled at very low density (1000 probes)
  
  Arrays of this design have barcodes that begin with 16022565 or 2522565.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Feature Extraction feature number.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
  Genome build: hg18.
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/