title: Glomus intraradices EST expression array
status: Public on Aug 01 2011
contact.city: Champenoux
contact.first: Annegret
contact.last: Kohler
contact.email: annegret.kohler@inrae.fr
contact.address: Centre Grand Est Nancy
contact.country: France
contact.institute: INRAE
organism: Rhizophagus intraradices
description: This is a condensed platform of the full array which has probes designed from a robust set of non-redundant virtual transcripts (NRVT) (25,906, ~20Mb) transcribed in quiescent and germinated spores, extraradical mycelium (ERM) and symbiotic roots of Glomus intraradices produced by Sanger- and 454-sequencing. The G. intraradices EST expression array (4 x 72K) manufactured by Roche NimbleGen Systems Limited (Madison, WI) contained three independent, non identical, 60-mer probes per sequence. Included in the oligoarray were 22,402 G. intraradices non-redundant transcripts, 5785 random 60-mer control probes and labeling controls.
manufacture_protocol: Propriety in situ oligonucleotide synthesis