title: CCDTM Hs_CCDTM36k - version 1
status: Public on Jul 24 2008
contact.city: Doha
contact.first: Francesco
contact.middle: Maria
contact.last: Marincola
contact.email: fmarincola@sidra.org
contact.address: Al Nasr Tower, AL Corniche Street, PO Box 26999
contact.country: Qatar
contact.institute: Sidra Medical and Research Center
contact.phone: 301-793-8210
organism: Homo sapiens
manufacture_protocol: Microarrays are printed with GeneMachines robotic arrayer from Genomic Solutions (http://www.genomicsolutions.com) that is fitted with a printhead containing 48 SMP3 printing pins from Telechem International (http://www.arrayit.com). The human oligo probe set is purchased from Operon Human Genome Array-Ready Oligo Set[tm] (AROS) Version 4.0 which contains 35,035 oli­gonucleotide probes, representing approximately 25,100 unique genes and 39,600 transcripts excluding control oligos. The human version 4.0 is constructed based on the Ensembl human database build (NCBI-35c), with a full coverage on NCBI human Refseq dataset (04/04/2005). In addition, it integrates a significant portion of unique full-length cDNA clone sequences from H-Invitational Database (release 1.8). The microarray spot densities are 157.5 microns (center-to-center), and one spot is printed per probe per slide. The microarrays are printed on Epoxy coated slide (ThermoFisher) and post processed according to manufacture instruction.