title: NimbleGen 385k whole genome tiling 2006-07-12_galGal3_WG_CGH
status: Public on Jun 11 2010
contact.city: Nashville
contact.first: Xiaofei
contact.last: Wang
contact.email: xwang@tnstate.edu
contact.state: TN
contact.address: 3500 John A Merritt blvd
contact.department: Biological Sciences
contact.country: USA
contact.institute: Tennessee State University
contact.phone: 615 963 2541
organism: Gallus gallus
description: UCSC May 2006 chicken (Gallus gallus) v2.1 draft assembly
manufacture_protocol: Whole genome CGH design for chicken (galGal3). Whole genome tiled at 50 bp interval spacing using dual mode (Tm 76; 148 cycles). Whole genome CGH probes selected at 2000 bp interval spacing, using 500 bp window. Used 15mer frequency of 30 for final filtering. Interval spacing stats: 2557 bp (mean); 2586 bp (median). 4357 random probes added.