title: Agilent-023442 Custom Mouse Array
status: Public on Sep 30 2015
contact.city: Dublin
contact.first: Karsten
contact.last: Hokamp
contact.email: kahokamp@tcd.ie
contact.address: College Green
contact.department: Smurfit Institute of Genetics
contact.country: Ireland
contact.institute: Trinity College Dublin
contact.phone: +35318962719
organism: Mus musculus
description: Arrays of this design have barcodes that begin with 16023442 or 2523442.
  
  Orientation:
  Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
  
  The ID column represents the Agilent Feature Extraction feature number.
  
  Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
  
  To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
  
manufacture_protocol: see manufacturer's web site at http://www.agilent.com/