title: NimbleGen Rat Promoter Array [2006-10-31_RN34_promoter_2of2]
status: Public on Oct 30 2013
contact.city: Saskatoon
contact.first: Deborah
contact.last: Anderson
contact.email: deborah.anderson@saskcancer.ca
contact.state: Saskatchewan
contact.address: 107 Wiggins Road
contact.country: Canada
contact.institute: University of Saskatchewan
contact.phone: 13069667038
organism: Rattus norvegicus
description: Design ID: 4809
  Design name: 2006-10-31_RN34_promoter_2of2
  Genome build: RN34
  
  Second of two arrays in the consolidated promoter region design for the rat genome (rn34). Array two contains promoter regions from chromosomes 7 (through position 138512442) through chr20, chrX and the "random" chromosomes.
  Includes 4500 bp upstream of transcriptional start and 1125 bp downstream. Isothermal probes using dual tm/cycle restriction:, 50-75 bp, tm 76, 148 cycles, 15-mer frequency of 100. Probes selected from rn34_tiling database using interval of 75 bp and window size of 25 bp. Interval spacing: 104 bp (mean); 105 bp (median).
manufacture_protocol: See manufacturer's website (www.nimblegen.com).