title: Tomato cDNA Microarray, CGEP/Cornell

status: Public on Feb 17 2004

city: Rehovot

first: Robert

last: Fluhr

department: Plant Sciences

country: Israel

institute: Weizmann Institute of Science

organism: Solanum lycopersicum

technology: spotted DNA/cDNA

description: These arrays contain approximately 12,000 elements. In an effort to make these arrays useful for a wide range of gene expression research these unigenes have been selected at random from a number different cDNA libraries made from a range of tissue including leaf, root, fruit, and flowers. The gene fragments are printed in 32 sub-grids, in 21 by 20 spot arrangement per sub-grid.

distribution: non-commercial

manufacture_protocol: not available


title: NGS_mouse_immuno

status: Public on Nov 05 2002

city: Madison

first: Todd

last: Richmond

state: WI

address: One Science Court

department: Bioinformatics

country: USA

institute: NimbleGen Systems Inc.

organism: Mus musculus

technology: in situ oligonucleotide

description:
The array contains 3234 mouse genes, represented by 20 probes per gene. Each probe is 24 bp in length and has a mismatch control with 2 mismatches (one at position 6 and the other at position 12 as measured from the 5' end). Mismatch basepairs are shown in lowercase in the platform file.

Disclaimer of Liability

These data are being made available for research purposes only. NimbleGen Systems Inc. does not warrant or assume any legal liability or responsibility for the accuracy, completeness, or usefulness of this data for any purpose.


title: CMF/NKI produced Human 18K cDNA array

status: Public on Jun 01 2005

city: Leiden

first: Elza

middle: C

last: de Bruin

country: Netherlands

institute: Leiden University Medical Center

organism: Homo sapiens

description:
A human array containing over 18K features that have been selected from the Research Genetics Human Sequence Verified library. The selection criterium was annotation. The array is produced at the CMF/NKI (Amsterdam, The Netherlands).

Keywords = cDNA

first: Simone

last: van de Pas

first: Esther

last: Lips

first: Ronald

last: van Eijk

first: Minke

last: van der Zee

first: Marcel

last: Lombaerts

first: Tom

last: van Wezel

first: Corrie

last: Marijnen

first: Han

last: van Krieken

first: Jan Paul

last: Medema

first: Cornelis

last: van de Velde

first: Paul

last: Eilers

first: Lucy

last: Peltenburg


title: Human 19K oligo array

status: Public on Apr 30 2005

city: Pamplona

first: Raquel

last: Malumbres

state: Navarra

address: Avenida Pio XII 55

department: Hemato-Oncology

country: Spain

institute: University of Navarra/ Clínica Universidad de Navarra

technology: spotted oligonucleotide

description:
This oligonucleotide microarray is composed of 19200 60 mer oligonucleotides from the Compugene collection. The oligonucleotides were printed by the Center for Applied Genomics of the University of Medicine of New Yersey.
Keywords = oligonucleotide printed microarray


title: GNF1M

status: Public on Mar 19 2004

city: San Diego

first: John

middle: R

last: Walker

state: CA

address: 10675 John Jay Hopkins

institute: Genomics Institute of the Novartis Research Foundation

description:
GNF1M
We identified a non-redundant set of target sequences for the mouse using the following sources: RefSeq (12,029 sequences), Celera (29,331 sequences), and RIKEN (46,299 sequences).  First, all sequences were RepeatMasked to remove repetitive elements.  Next, sequence identity between individual sequences was established using pairwise BLAT or BLAST and sim4.  The results from single-linkage clustering were further triaged to produce a final target set of 36,182 targets with the highest degree of confidence of computational prediction (biasing toward sequences containing Interpro domains and away from non-coding RNAs).  The final target sets were submitted to the Affymetrix's chip design pipeline for fabrication of the arrays. For data submission here, only probe sets that mapped to public sequences are given.


title: Affymetrix roDROMEGAa Drosophila full genome

status: Public on Feb 22 2002

city: Basel

first: Thomas

last: Loop

address: Klingelbergstrasse 50

department: Institute of Zoology

country: Switzerland

institute: University of Basel

organism: Drosophila melanogaster

description:
Custom-designed Drosophila oligonucleotide array (Affymetrix, Santa Clara, CA). It contains 14,090 sequences representing 13,369 single transcripts encoding Drosophila proteins deposited in SWISS-PROT/TrEMBL databases (Celera Genome/BDGP Release no. 1) as well as prokaryotic and custom chosen control sequences. Each sequence is represented on the array by a set of 14 oligonucleotide probes of matching sequence and 14 probes with a single nucleotide mismatch. The oligonucleotides are 25mers. The Average Difference (Avg Diff) between the perfect match hybridization signal and the mismatch signal is proportional to the abundance of a given transcript [Lipshutz RJ: High density synthetic oligonucleotide arrays. Nat Genet 1999; 21:20-24].
Keywords = Drosophila melanogaster, full genome, Affymetrix, chip, genechip, oligonucleotide

distribution: custom-commercial


title: Rosetta (Merck) Splicing Experiment, Chip 5 of 5

status: Public on Dec 19 2003

city: Kirkland

last: Castle

state: WA

department: Informatics

institute: Merck

description:
Oligonucleotide array on glass.
Contains 36-mer probes on 10-mer T stilts (46-mer), each spanning an exon-exon junction.
Submitted for Science publication Johnson et al.
Keywords = junction splicing oligonucleotide

first: Jason

middle: M

last: Johnson

first: Philip

last: Garrett-Engele

first: Patrick

last: Loerch

first: Zhengyan

last: Kan

first: Christopher

middle: D

last: Armour

first: Ralph

last: Santos

first: Eric

middle: E

last: Schadt

first: Roland

last: Stoughton

first: Daniel

last: Shoemaker


title: Scripps Malaria GeneChip

status: Public on Mar 08 2005

city: Parkville

first: Ken

last: Simpson

state: Victoria

address: 1G Royal Parade

department: Genetics and Bioinformatics

country: Australia

institute: The Walter and Eliza Hall Institute

organism: Plasmodium falciparum

description: Custom GeneChip for Plasmodium falciparum

first: Karine

middle: G

last: Le Roch

first: Yingyao

last: Zhou

first: Peter

middle: L

last: Blair

first: Muni

last: Grainger

first: J

middle: Kathleen

last: Moch

middle: David

last: Haynes

first: Patricia

last: De la Vega

first: Anthony

middle: A

last: Holder

first: Serge

last: Batalov

middle: J

last: Carucci

first: Elizabeth

last: Winzeler


title: Novusgene type 3 Hematology/Oncology TMU 667 array

status: Public on Jun 14 2005

city: Tokyo

first: Junko

middle: H

last: Ohyashiki

address: 6-7-1, Nishishinjuku, Shinjuku-ku

department: Intractable Immune System Diseases Research Center

country: Japan

institute: Tokyo Medical University

description: Pathway focused low-density oligonucleotide microarray which contains 667 selected genes related with hematology and oncology.

first: Tomoiku

last: Takaku

manufacture_protocol: This DNA chip was made up of tirplicate spots of 60-mer oligonucleotide highly specific probes. To obtain reproducible results, a subset of genes were spotted more than three (i.e housekeeping genes, and negative control).


title: Mammary 6k and Incyte Mm GEM1

status: Public on Jun 18 2005

city: New York

first: Shixia

last: Huang

state: NY

department: Cell Biology

institute: Memorial Sloan-Kettering Cancer Center

description:
Microarray analysis reveals changes of gene expression in the evolution of mammary tumors in Wnt-1 transgenic mice
Keywords = Gene expression
Keywords = hyperplasia
Keywords = tumors
Keywords = metastasis
Keywords = Wnt-1
Keywords = Neu.

first: Yi

last: Li

first: Yidong

last: Chen

first: Katrina

last: Podspanina

first: Anne

last: Tann

first: Mario

last: Chamorro

first: Kartiki

middle: V

last: Desai

first: Adam

last: Olshen

first: Jian-Ming

first: David

last: Peterson

first: Jeffery

last: Green

first: Harold

last: Varmus


title: Rosetta (Merck) Splicing Experiment, Chip 3 of 5

first: John

last: Castle

first: Jason

last: Johnson

first: Philip

last: Garrett-Engele

first: Patrick

last: Loerch

first: Zhengyan

last: Kan

first: Christopher

last: Armour

first: Ralph

last: Santos

first: Eric

last: Schadt

first: Roland

last: Stoughton

first: Daniel

last: Shoemaker


title: EOSS002A

status: Public on Nov 21 2001

city: Cambridge

first: Iain

last: Eaves

address: Hills Road

department: Medical genetics

country: United Kingdom

institute: Cambridge Institute for Medical Research

description: Custom Affymetrix GeneChip designed by Eos Biotechnology Inc. to measure the expression of a large number of genes or ESTs on a single array.  This is achieved by choosing those probes from within each set of 20 Affymetrix perfect match probes that show the least random fluctuation relative to the perceived specific hybridization over a wide ranging set of samples (Glynne et al. 2000).  Experiments undertaken by Eos have revealed that the mismatch probes do not increase sensitivity or reproducibility (RJG and GG unpublished data).  Consequently, each gene on the Eos array is represented by 6-8 perfect match probes, as opposed to 20 perfect match and 20 mismatch probes, increasing the number of genes for which expression can be assayed in parallel to >39,000.

first: Linda

middle: S

last: Wicker

first: Ghassan

last: Ghandour

first: Paul

last: Lyons

first: Laurence

middle: B

last: Todd

first: Richard

last: Glynne


title: isb1

status: Public on Feb 02 2004

city: Seattle

first: Timothy

last: Galitski

address: 1441 N. 34th Street

institute: Institute for Systems Biology

organism: Saccharomyces cerevisiae

description: 70mer probes to all ORFs


title: Sentrix Human-6 Expression BeadChip

status: Public on Jun 03 2005

last: Illumina Inc.

address: 9885 Towne Centre Drive

institute: Illumina Inc.

technology: oligonucleotide beads

description: The Sentrix Human-6 BeadChip can be used to study expression of over 47,000 human transcripts. Researchers can generate whole-genome expression profiles for 6 samples in parallel on a single BeadChip. Array is composed of 3 micron features with average feature redundancy of 30-fold . All features are QCed by sequential hybridizations process called array decoding. Probes are fully screened all-full-length 50-mers. Assay requires 50-100ng of total RNA input. Array content is based on RefSeq and additional space is occupied by targets selected from Unigene build 163 and Gnomon databases.

distribution: commercial


title: Rainbow trout sex differentiation cascade-related genes investigated using RT-PCR

city: Rennes

last: Baron

state: Brittany

department: Station Commune de Recherches en Ichtyophysiologie

country: France

institute: Institut National de la Recherche Agronomique-INRA

organism: Oncorhynchus mykiss

technology: RT-PCR

description: Virtual platform listing sex differentiation cascade-related candidate genes investigated using RT-PCR.

distribution: virtual


status: Public on Oct 26 2003

city: Carbondale

first: M.

middle: Javed

last: Iqbal

state: IL

address: 176 Ag. Building, MC 4415

department: Animal Sci, Food & Nutrition + Plant, Soil & General Agriculture

institute: Southern Illinois University at Carbondale

organism: Rattus norvegicus

description:
Amersham Biosciences CodeLink Uniset Rat I Bioarray.

It has:

- ~10 000 rat genes, one specific, prescreened 30-mer probe per gene, functionally validated
- one set of housekeeping genes that may be used for baseline normalization
- 68 bacterial control probes, 18 positive control probes to monitor cDNA and cRNA synthesis and array activity,
- 50 negative control probes to determine threshold and assess background

first: Muhammad

first: Karen

last: Jones


title: Yeast Splicing Chip v4.1

status: Public on Jun 13 2005

city: Santa Cruz

first: Todd

last: Burckin

address: 1156 High Street

department: Molecular, Cell, & Developmental Biology

institute: University of California Santa Cruz

description:
This is an oligonucleotide microarray designed to measure splicing in yeast.  Each intron containing gene has 3 features (Splice Junction, Intron, Exon2).  The SJ oligo symmetrically spans the splice junction with 20nt on each side.  The SJ, Int, and Ex2 oligos are custom designed 40-mers.  The array also contains about 1000 70-mers from the Operon Yeast Genome Set.  All of the SJ, Int, and Ex2 oligos are printed 4 times, the Operon 70-mers are printed only once.
Keywords = Splicing

first: Tyson

last: Clark

first: Charles

middle: W

last: Sugnet

first: Manuel

last: Ares

last: Nagel


title: LION_Brain_Array

city: Berlin

first: Ulrike

last: Nuber

address: Ihnestrasse 73

country: Germany

institute: Max Planck Institute for molecular Genetics

manufacturer: Max Planck Institute for Molecular Genetics, Berlin, Germany


title: Rosetta/Merck PatternID Mouse_25k_v1.1

status: Public on Nov 25 2004

first: Stephen

last: Edwards

department: Research Genetics

institute: Rosetta Inpharmatics (Merck & Co.)

description:
Oligonucleotide array on glass.
Contains 60mer probes designed against 23,000+ mouse genes arrayed on Agilent ink-jet arrays.
This array design and associated expression data described in Nature publication, Vol 422(6929):297-302.
Keywords = mouse genetics gene expression oligonucleotide

first: Guy

last: Cavet

first: Amit

last: Kulkarni

first: John

last: Castle

first: Eric

last: Schadt

first: Stephanie

last: Monks

last: Milligan

last: Lamb

first: Peter

last: Linsley

first: Mao

last: Mao

first: Roland

last: Stoughton

last: Friend


title: Tiling arrays of novel promoters designed for RenLab by Nimblegen (HG16)

status: Public on Jun 23 2005

first: Chunxu

last: Qu

department: Gene Regulation

institute: Ludwig Institute for Cancer Research

description: A tiling array is designed using 50-mer oligonucleotide that represent 28kb sequence surrounding 567 of 632 unmatched putative promoters.  To verify that these promoters drive transcription, mRNA from IMR90 cells were analysed using this array.

first: Tae Hoon

last: Kim

first: Leah

middle: O

last: Barrera

first: Ming

last: Zheng

first: Michael

last: Singer

last: Richmond

first: Yingnian

last: Wu

last: Green

first: Bing

last: Ren

manufacture_protocol: as described at manufacturer's web site


title: NMEBA V1

city: St Lucia

first: Sean

last: Grimmond

state: QLD

address: IMB, Uni of Qld

institute: Institute of Molecular Bioscience

manufacturer: ARC SRC for functional and Applied Genomics

manufacture_protocol: ESI Chip writer pro array spotting protocol.


title: GLYCOv1 glycogene array

status: Public on May 03 2005

city: La Jolla

first: Jennifer

last: Hammond

address: 10550 N. Torrey Pines Rd.

institute: The Scripps Research Institute

organism:
Homo sapiens
Mus musculus

description:
A custom-designed Glyco-gene Chip array that contains probe sets to monitor the expression of human and mouse transcripts relevant to the Consortium for Functional Glycomics.The following classes of genes are represented on the GLYCOv1 Gene Chip: Glycosyltransferases Glycan-binding proteins (GBP) Sulfotransferases C-type lectins Neuraminidases Nucleotide sugar synthesis and transporter proteins N-glycan biosynthesis related genes Mucins Proteoglycans Growth factors Cytokines Chemokines and Conserved oligomeric Golgi (COG) complex genes.
Available as a resource throught the Consortium of Functional Glycomics. See this URL for complete information http://web.mit.edu/glycomics/consortium/

first: Timothy

last: Gilmartin

first: Steven

middle: R

last: Head

first: James

middle: C

last: Paulson

first: Elena

last: Comelli

manufacture_protocol: Affymetrix custom array standard protocol.  Please see http://www.affymetrix.com for more information.


title: Nimblegen ENCODE tiling array (HG17) with 50mer probe at 38bp interval for RenLab

status: Public on Jun 15 2005

description: ENCODE regions tiled from HG17; NCBI Build 35. 50-mer tiling at 38 bp interval. Only 4 regions were re-tiled: ENm006, ENm014,ENr131,ENr211. For the remainder, the probes from HG16 were renamed and remapped to the HG17 coordinates. 3319 random probes added Mask set trimmed to 148 cycles.

manufacture_protocol: as described in www.nimblegen.com


title: Yeast Splicing Chip v5.0

first: Todd

last: Burckin

first: Tyson

last: Clark

first: Charles

last: Sugnet

first: Manuel

last: Ares

last: Nagel


title: Rice 8987 EST microarray

status: Public on Jun 11 2005

city: Tsukuba

first: Shoshi

last: Kikuchi

state: Ibaraki

address: 2-1-2 Kan-nondai

department: Molecular Genetics

institute: National Institute of Agrobiological Sciences

organism: Oryza sativa

description:
The enormous collection of approximately 110K ESTs includes the approximately 60 000 ESTs in the Rice Genome Project that have been analyzed thus far; from these 60K ESTs more than 9000 partial cDNA sequences corresponding to unique genes have been identified. On the basis of the results of large-scale cDNA analysis, We used an 8987-EST collection to construct a cDNA microarray for which related to other genomics information (full-length cDNA, expression profile, high accuracy genome sequence, phenotype, genetic map, and physical map) in rice. The microarrays can be used to monitor gene expression profiles and to initiate functional analysis of the rice genome.
Keywords = Rice
Keywords = Plant
Keywords = monocotyledons
Keywords = full-length cDNA
Keywords = NIAS

first: Keiichi

last: Kojima

first: Masahiro

last: Ishikawa

first: Naoki

last: Kishimoto

first: Katsumi

last: Sakata

first: Kimiko

last: Yamamoto

first: Takuji

last: Sasaki

first: Junshi

last: Yazaki


title: microRNAs microarray

status: Public on Jun 19 2005

city: Rehovot

first: Omer

last: Barad

address: Plaut 10, Science Park

institute: Rosetta Genomics Ltd.

description:
Custom made microarray prepared by Agilent using their SurePrint technology, optimized for microRNAs detection.
Keywords = microRNA
Keywords = miRNA

first: Isaac

last: Bentwich

first: Amir

last: Avniel

first: Yael

last: Karov

first: Ranit

last: Aharonov

first: Shlomit

last: Gilad

first: Adi

last: Barzilai

first: Paz

last: Einat

first: Uri

last: Einav

first: Eti

last: Meiri

first: Eilon

last: Sharon

last: Spector

first: Zvi

manufacture_protocol: SurePrint


title: Rat liver oligo array

status: Public on Jun 17 2005

city: Columbia

first: Sachin

last: Bhusari

state: MO

address: 920 East campus dr

department: S140, Animal Science

institute: University of Missouri-Columbia

description: Rat liver oligo array

first: W

last: Lamberson

first: Eric

last: Antoniou


title: Yeast Splicing Chip v5.1

first: Todd

last: Burckin

first: Tyson

last: Clark

first: Charles

last: Sugnet

first: Manuel

last: Ares

first: Roland

last: Nagel


title: Yeast Splicing Chip v6

description:
This is an oligonucleotide microarray designed to measure splicing in yeast.  Each intron containing gene has 3 features (Splice Junction, Intron, Exon2).  The SJ oligo symmetrically spans the splice junction with 20nt on each side.  The SJ, Int, and Ex2 oligos are custom designed 40-mers.  The array also contains a collection of 40-mers desiigned to detect hypothetical introns predicted by comparative genomics.  The array also contains about 1000 70-mers from the Operon Yeast Genome Set.  All of the SJ, Int, and Ex2 oligos are printed 4 times, the Operon 70-mers are printed only once.
Keywords = Splicing


title: Saccharomyces cerevisiae intergenic regions

city: Boston

first: Kevin

last: Struhl

state: MA

address: 240 Longwood Ave.

department: Biological Chemistry and Molecular Pharmacology

institute: Harvard Medical School

first: Edward

last: Sekinger

first: Zarmik

last: Moqtaderi


title: SHDF

status: Public on Jun 04 2005

city: Saskatoon

first: Matthew

last: Bainbridge

state: SK

address: 20 Campus Drive

department: Computer Science

country: Canada

institute: U of Saskatchewan

description:
Human 42K slide from Stanford.  Print version SHDF.
Keywords = Human stanford shdf

first: J

last: HEBERT


title: PBRC Mouse Oligo_M5 series (Operon 16K)

status: Public on May 16 2005

city: Baton Rouge

first: Leslie

middle: DeBardeleben

last: McLaughlin

state: LA

address: 6400 Perkins Road

department: Department of Experimental Obesity

institute: Pennington Biomedical Research Center

description:
Mouse Oligonucleotide (70 mer) probes designed and manufactured by Operon (mouse library version 1.1, QIAGEN Operon, Inc., Alameda, CA) were solubilized in 45% DMSO and printed onto poly-L-lysine slides.  This library contains 15,552 oligos representing 13,443 unique genes.  Slides were printed using a Genomic Solutions (Gene Machine) OmniGrid equipped with Telechem SMP4 Stealth Micro Spotting pins by the Genomics Core Facility at the Pennington Biomedical Research Center.  Additional information concerning gene specifics can be located on the Operon website (http://omad.operon.com/mouse/index.php)
Keywords = mouse 16K oligonucleotide

middle: D

first: Jennifer

last: McClaine

first: Dawn

middle: M

last: Graunke

first: Robert

last: Koza

first: Christopher

last: Faulk

first: John

last: Bearden


title: ISMapping_Platform_2

status: Public on Jun 02 2005

city: Saint Paul

first: Betsy

last: Martinez-Vaz

state: MN

address: 1479 Gortner Ave

department: Biochemistry , Molecular Biology and Biophysics

institute: University of Minnesota

organism: Escherichia coli

description: This platform contains the information about the genes in the DNA array used to map IS elements in E.coli MG1655 isolates. The experiments were single channel hybridizations.

first: Yang

last: Xie

first: Wei

last: Pan

first: Arkady

last: Khodursky


title: Human 36mer ENCODE region oligonucleotide tiling array (Yale design #2)

status: Public on May 24 2005

city: New Haven

first: Olof

last: Emanuelsson

state: CT

address: 260 Whitney Avenue

institute: Yale University

description:
Maskless photolithographic synthesis oligonucleotide array on glass.

This series of microarrays is designed to represent sense (FWD) and antisense (REV) strands of the nonrepetitive DNA of the human ENCODE pilot regions with 36mer oligonucleotide probes, positioned every 36nt on average (end to end tiling). The probes were selected from the July 2003 human genome sequence assembly (NCBI Build 34/hg16).

This design covers ENm008, ENm013-014, ENr111-213, the backup regions for the manual picks, and parts of ENm012 and ENr221. In addition to the ENCODE regions, the nonrepetitive part of three RefSeq genes, ATP6AP1 (NM_001183), PSMD4 (NM_002810), and ARF5 (NM_001662) were tiled at one nucleotide resolution.

Microarrays were constructed with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis (MAS) units (NimbleGen Systems, Madison, WI).

Arrays containing approximately 390,000 oligonucleotide features in a 14 × 17.4 mm square area were fabricated with photolabile phosophoramidites (NPPOC-dAdenosine (N6-tac) -Cyanoethylphosphoramidite, NPPOC-dCytidine (N4-Isobutyryl) -Cyanoethylphosphoramidite NPPOC-dGuanosine (N2-ipac) -Cyanoethylphosphoramidite, NPPOC-dThymidine-Cyanoethylphosphoramidite) obtained from Proligo (Boulder, CO). Following MAS synthesis, base-protecting groups were removed in a solution of ethylenediamine:ethanol (1:1 v/v) (Aldrich, St. Louis, MO) for 2 hours. The arrays were rinsed with water, dried and stored desiccated until use.

Keywords = ENCODE, tiling array, maskless photolithography


title: Galbraith Laboratory Operon Long Oligonucleotide Microarray version 3.0 (ATv302.02.Z)

status: Public on Jun 07 2005

city: Tucson

first: David

middle: William

last: Galbraith

state: AZ

address: 303 Forbes Building

department: Plant Sciences and Bio5 Institute

institute: University of Arizona

organism: Arabidopsis thaliana

description: This oligonucleotide array is produced from the Operon Version 3.0 Array-Ready Oligo set (AROS), which comprises 29,110 70-mer oligonucleotides representing 26,173 protein-coding genes, and 28,964 protein-encoding gene transcripts, and 87 microRNA gene precursors.  AROS design is based on ATH1 release 5.0 of the TIGR Arabidopsis genome annotation database, and Release 4.0 of the miRNA Registry at the Sanger Institute.  Various additional elements are printed as controls.  Microarrays can be ordered from the Galbraith laboratory. This platform represents slides ATv302.02.001-ATv302.02.300 (http://www.ag.arizona.edu/microarray).

manufacturer: The Galbraith Lab, University of Arizona

manufacture_protocol: GeneMachines Omnigrid 300


title: Rice oligo array version 2

status: Public on May 20 2005

city: Rockville

first: Li

last: Zheng

state: MD

institute: The Institute for Genomic Research

description: Spotted oligo array on glass. The NSF funded rice oligo array version 2 contains 20190 unique probes from rice. The number of total spots including empty and controls is 21120.

first: Pamela

last: Ronald


title: Bead-based microRNA profiling platform version 1

status: Public on May 06 2005

first: Jun

last: Lu

address: 10 Amistad St

department: Yale Stem Cell Center and Department of Genetics

description:
Capture oligonucleotides were crosslinked to uniquely-colored Luminex xMap beads, which serve as discriminators of probe identity
This set includes 282 oligonucleotides, designed based on miRNA registry rfam 5.0 database.
Capture oligonucleotides also recognize miRNAs in Mus musculus and Rattus norvegicus
Keywords = bead
Keywords = Luminex
Keywords = oligonucleotide
Keywords = miRNA
Keywords = microRNA

first: Gad

last: Getz

first: Eric

last: Miska

first: Ezequiel

last: Alvarez-Saavedra

first: Justin

last: Lamb

last: Peck

first: Benjamin

middle: L

last: Ebert

first: Raymond

last: Mak

first: Alejandro

last: Sweet-Cordero

first: Adolfo

last: Ferrando

first: James

last: Downing

first: Tyler

last: Jacks

first: H

last: Horvitz

first: Todd

last: Golub


title: Maize oligo array version 1.2 array B

status: Public on Apr 28 2005

address: 9712 Medical Center Dr.

organism: Zea mays

description: Spotted oligo array on glass. The whole maize array set 1.2 version contains 56310 unique probes from maize and array B contains 27190 of them. The number of total spots including empty and controls is 32448.

first: Carol

middle: Robin

last: Buell


title: Operon Human V2

status: Public on Apr 13 2005

city: Baltimore

first: rafael

last: irizarry

institute: Johns Hopkins University

description: Operon Human V2

first: Rafael

middle: A

last: Irizarry


title: Maize oligo array version 1.1 array B

first: Li

last: Zheng

description: Spotted oligo array on glass. The whole maize array set 1.1 version contains 55550 unique probes from maize and array B contains 27109 of them. The number of total spots including empty and controls is 32448.


title: Tiling microarray analysis of rice japonica chromosome 10(reverse strand)

status: Public on Apr 09 2005

first: Xing-Wang

last: Deng

address: 165 Prospect

department: MCD Biology

description: Oligo nucleotides 36mer in length are designed to represent sense and antisense strands of the nonrepetitive DNA of the japonica and indica rice chromosome 10. The probes were selected from the April 12, 2004 japonica genome sequence (TIGR rice annotation 2.0) and the August 1, 2003 indica sequence from BGI. Microarrays containing these oligos are synthesized on glass with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis units (NimbleGen Systems, Madison, WI).

first: Lei

last: Li

first: Xiangfeng

last: Wang

first: Mian

last: Xia

first: Viktor

last: Stolc

first: Ning

last: Su

first: Zhiyu

last: Peng


title: Tiling microarray analysis of rice indica chromosome 10 (forward strand)

description:
Oligo nucleotides 36mer in length are designed to represent sense and antisense strands of the nonrepetitive DNA of the japonica and indica rice chromosome 10. The probes were selected from the April 12, 2004 japonica genome sequence (TIGR rice annotation 2.0) and the August 1, 2003 indica sequence from BGI. Microarrays containing these oligos are synthesized on glass with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis units (NimbleGen Systems, Madison, WI).
Keywords = transcription
Keywords = gene expression
Keywords = rice

first: Songgang

first: Waraporn

last: Tongprasit

first: Jun

first: Xiping

first: Xingwang


title: ATH whole genome chip 13

status: Public on Feb 11 2005

city: Moffett Field

institute: NASA Ames Research Center

description: 36-mer probes covering about every 10 bps of Arabidopsis Thaliana genome

first: Manoj

middle: P

last: Samanta

first: Himanshu

last: Sethi

first: Shoudan

last: Liang

first: David

last: Nelson

first: Adrian

last: Hegeman

first: Clark

last: Rancour

first: Sebastian

last: Bednarek

first: Eldon

last: Ulrich

first: Qin

last: Zhao

first: Russell

last: Wrobel

first: Craig

last: Newman

first: Brian

last: Fox

first: George

last: Phillips

first: John

last: Markley

first: Michael

last: Sussman


title: ATH whole genome chip 11

status: Public on Feb 10 2005

first: Waraporn

first: Viktor

last: Stolc


title: Platform_Motile_NonMotile

first: Betsy

last: Martinez-Vaz

description:
This is a platform containing the names and ID for the arrays used in the experiments to compare the level of expression of the motile strains with the non motile isolate of E.coli
Keywords = IS
Keywords = mapping
Keywords = DNA
Keywords = arrays
Keywords = nonmotile

first: Yang

last: Xie

first: Wei

last: Pan

first: Arkady

last: Khodursky


title: ATH whole genome chip 9

last: Tongprasit

first: Manoj

last: Samanta

first: Himanshu

last: Sethi

first: Shoudan

last: Liang

first: David

last: Nelson

first: Adrian


title: E.coli_K12_MN2_IS_Mapping_IS5_Motile

description:
This is the array plataform used for the experiments comparing the IS5 mutants to the motile strains in the study of genome wide location of IS elements using DNA microarrays. Gene ID were assigned arbitrary and do not reassemble Unique ID in the arrays gal files or godlists
Keywords = IS
Keywords = mapping
Keywords = DNA
Keywords = arrays


title: ATH whole genome chip 7

last: Hegeman

first: Clark

last: Rancour

first: Sebastian

last: Bednarek

first: Eldon

last: Ulrich

first: Qin

last: Zhao

first: Russell


title: Maskless Photolithographic 36mer ENCODE Array (FWD)

status: Public on May 27 2005

first: Joel

last: Rozowsky

address: 266 Whitney Ave, Bass 437

department: Molecular Biophysics & Biochemistry

description:
Maskless photolithographic synthesis oligonucleotide array on glass. This microarray is designed to the forward strand nonrepetitive DNA of the human ENCODE regions with 36mer oligonucleotide probes tiled approximtely end-to-end (oligonucleotides are allowed to shift by several nucleotides to avoid oligomer sequences forming secondary structure). The probes were selected from NCBIv34 (hg16) build of the human genome. Microarrays were constructed with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis (MAS) units (NimbleGen Systems, Madison, WI). Arrays containing approximately 390,000 oligonucleotide features in a 14 mm x 17.4 mm square area were fabricated with photolabile phosophoramidites (NPPOC-dAdenosine (N6-tac) -Cyanoethylphosphoramidite, NPPOC-dCytidine (N4-Isobutyryl) -Cyanoethylphosphoramidite NPPOC-dGuanosine (N2-ipac) -Cyanoethylphosphoramidite, NPPOC-dThymidine-Cyanoethylphosphoramidite) obtained from Proligo (Boulder, CO). Following MAS synthesis, base-protecting groups were removed in a solution of ethylenediamine:ethanol (1:1 v/v) (Aldrich, St. Louis, MO) for 2 hours. The arrays were rinsed with water, dried and stored desiccated until use.
Keyword: genomic tiling, maskless photolithography


title: ATH whole genome chip 5

first: Waraporn

last: Wrobel

first: Craig

last: Newman

first: Brian

last: Fox

first: George

last: Phillips

first: John

last: Markley

first: Michael

last: Sussman


title: Maskless Photolithographic 50mer ENCODE Array (FWD)

description:
Maskless photolithographic synthesis oligonucleotide array on glass. This microarray is designed to the forward strand nonrepetitive DNA of the human ENCODE regions with 50mer oligonucleotide probes tiled approximtely end-to-end (oligonucleotides are allowed to shift by several nucleotides to avoid oligomer sequences forming secondary structure). The probes were selected from NCBIv34 (hg16) build of the human genome. Microarrays were constructed with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis (MAS) units (NimbleGen Systems, Madison, WI). Arrays containing approximately 190,000 oligonucleotide features in a 14 mm x 17.4 mm square area were fabricated with photolabile phosophoramidites (NPPOC-dAdenosine (N6-tac) -Cyanoethylphosphoramidite, NPPOC-dCytidine (N4-Isobutyryl) -Cyanoethylphosphoramidite NPPOC-dGuanosine (N2-ipac) -Cyanoethylphosphoramidite, NPPOC-dThymidine-Cyanoethylphosphoramidite) obtained from Proligo (Boulder, CO). Following MAS synthesis, base-protecting groups were removed in a solution of ethylenediamine:ethanol (1:1 v/v) (Aldrich, St. Louis, MO) for 2 hours. The arrays were rinsed with water, dried and stored desiccated until use.
Keyword: genomic tiling, maskless photolithography


title: ATH Whole genome chip 3

last: Tongprasit

first: Viktor

last: Stolc

first: Manoj

first: Andrian

first: C


title: ATH Whole genome chip 2

last: Samanta

first: Himanshu

last: Sethi

first: Shoudan

first: David


title: Human 36mer ENCODE region oligonucleotide tiling array (Yale design #1)

first: Olof

last: Emanuelsson

description:
Maskless photolithographic synthesis oligonucleotide array on glass.

This series of microarrays is designed to represent sense (FWD) and antisense (REV) strands of the nonrepetitive DNA of the human ENCODE pilot regions with 36mer oligonucleotide probes, positioned every 36nt on average (end to end tiling). The probes were selected from the July 2003 human genome sequence assembly (NCBI Build 34/hg16).

This design covers ENm001-ENm011 and parts of ENm012. In addition to the ENCODE regions, the nonrepetitive part of three RefSeq genes, ATP6AP1 (NM_001183), PSMD4 (NM_002810), and ARF5 (NM_001662) were tiled at one nucleotide resolution.

Microarrays were constructed with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis (MAS) units (NimbleGen Systems, Madison, WI).

Arrays containing approximately 390,000 oligonucleotide features in a 14 × 17.4 mm square area were fabricated with photolabile phosophoramidites (NPPOC-dAdenosine (N6-tac) -Cyanoethylphosphoramidite, NPPOC-dCytidine (N4-Isobutyryl) -Cyanoethylphosphoramidite NPPOC-dGuanosine (N2-ipac) -Cyanoethylphosphoramidite, NPPOC-dThymidine-Cyanoethylphosphoramidite) obtained from Proligo (Boulder, CO). Following MAS synthesis, base-protecting groups were removed in a solution of ethylenediamine:ethanol (1:1 v/v) (Aldrich, St. Louis, MO) for 2 hours. The arrays were rinsed with water, dried and stored desiccated until use.

Keywords = ENCODE, tiling array, maskless photolithography


title: Nimblegen ENCODE Array

description: ENCODE tiling array designed and manufactured by NimbleGen Systems Inc (Madison WI). The array tiles all the non-repetitive forward strand DNA sequence of the ENCODE regions with 50mer oligonucleotides spaced every 38bps (overlapping by 12bps). The array is designed on the NCBIv34 build (hg16) of the Human Genome. The array has approx 390,000 features.


title: Human 36mer ENCODE region oligonucleotide tiling array (Yale design #3)

description:
Maskless photolithographic synthesis oligonucleotide array on glass.

This series of microarrays is designed to represent sense (FWD) and antisense (REV) strands of the nonrepetitive DNA of the human ENCODE pilot regions with 36mer oligonucleotide probes, positioned every 36nt on average (end to end tiling). The probes were selected from the July 2003 human genome sequence assembly (NCBI Build 34/hg16).

This design covers ENm008, ENr222-334, the backup regions for the random picks, and parts of ENr221. In addition to the ENCODE regions, the nonrepetitive part of three RefSeq genes, ATP6AP1 (NM_001183), PSMD4 (NM_002810), and ARF5 (NM_001662) were tiled at one nucleotide resolution.

Microarrays were constructed with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis (MAS) units (NimbleGen Systems, Madison, WI).

Arrays containing approximately 390,000 oligonucleotide features in a 14 × 17.4 mm square area were fabricated with photolabile phosophoramidites (NPPOC-dAdenosine (N6-tac) -Cyanoethylphosphoramidite, NPPOC-dCytidine (N4-Isobutyryl) -Cyanoethylphosphoramidite NPPOC-dGuanosine (N2-ipac) -Cyanoethylphosphoramidite, NPPOC-dThymidine-Cyanoethylphosphoramidite) obtained from Proligo (Boulder, CO). Following MAS synthesis, base-protecting groups were removed in a solution of ethylenediamine:ethanol (1:1 v/v) (Aldrich, St. Louis, MO) for 2 hours. The arrays were rinsed with water, dried and stored desiccated until use.

Keywords = ENCODE, tiling array, maskless photolithography


title: Agilent, custom 8k features

status: Public on Jan 25 2005

city: Menlo Park

first: Daniel

middle: J

last: Chin

institute: PPD Discovery

description: Cell surface and secreted gene probes present 1,2,3 or 5 times on each array. 60-mer probes designed by Agilent criteria, blast-confirmed, and hybridization tested prior to final design.

first: Robert

last: Stull

first: Roya

last: Tavassoli

first: Scot

last: Kennedy

first: Steve

last: Osborn

first: Rachel

last: Harte

first: Yan

last: Lu

first: Cheryl

last: Napier

first: Arie

last: Abo


title: Bead-based microRNA profiling platform version 2

status: Public on May 11 2005

first: Jun

first: Gad

last: Getz

first: Eric

last: Miska

first: Ezequiel

last: Alvarez-Saavedra

first: Justin

last: Lamb

last: Peck

first: Benjamin

last: Ebert

first: Raymond

middle: H

last: Mak

first: Alejandro

last: Sweet-Cordero

first: Adolfo

last: Ferrando

first: James

last: Downing

first: Tyler

last: Jacks

first: H

last: Horvitz

first: Todd

last: Golub


title: Maize oligo array version 1.4 array B

first: Li

last: Zheng

description: Spotted oligo array on glass. The whole maize array set 1.4 version contains 56310 unique probes from maize and array B contains 27190 of them. The number of total spots including empty and controls is 32448.

first: Carol

last: Buell


title: Maize oligo array version 1.4 array A

description: Spotted oligo array on glass. The whole maize array set 1.4 version contains 56310 unique probes from maize and array A contains 29132 of them. The number of total spots including empty and controls is 32448.


title: Protein Design Labs Hu03 Custom Affymetrix GeneChip Array

status: Public on Oct 01 2004

city: Redwood City

first: Jordan

last: Hiller

address: 1400 Seaport Blvd.

institute: PDL BioPharma


title: OperonYeastV1.1

status: Public on May 06 2004

city: Durham

first: Zhengzheng

last: Wei

state: NC

department: MGM

institute: Duke University

description: Operon, Array-ready Oligo Set, Yeast Genome Oligo Set version 1.1 from Qiagen


title: Yeast Deletions UpTag array (Rosetta Inpharmatics)

status: Public on Nov 05 2004

first: Xuewen

last: Pan

address: 733 N. Broadway, Room 331

department: Department of Molecular Biology and Genetics

institute: Johns Hopkins University School of Medicine

description:
Array of Up (5') Tags as designed by the Yeast Deletion Project, in triplicate
Keywords = yeast, deletion, knockout, tag, barcode, synthetic, oligonucleotide

first: Daniel

last: Shoemaker


title: Maize oligo array version 1.3 array B

description: Spotted oligo array on glass. The whole maize array set 1.3 version contains 56310 unique probes from maize and array B contains 27190 of them. The number of total spots including empty and controls is 32448.


title: Rosetta (Merck) Genome Tiling Experiment PatternID 895

status: Public on Dec 17 2003

city: Seattle

first: Stephen

last: Edwards

institute: Rosetta Inpharmatics (Merck & Co.)

description:
Oligonucleotide array on glass.
Contains 60mer probes covering non-repetitive regions on chromosomes 20 & 22 in 30bp steps arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = genome tiling oligonucleotide

first: Eric

middle: E

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

middle: F

last: Tsinoremas


title: Maize oligo array version 1.3 array A

first: Li

last: Zheng

description: Spotted oligo array on glass. The whole maize array set 1.3 version contains 56310 unique probes from maize and array A contains 29132 of them. The number of total spots including empty and controls is 32448.

first: Carol

last: Buell


title: Rosetta (Merck) Genome Tiling Experiment PatternID 896

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Daniel

last: Shoemaker


title: Maize oligo array version 1.2 array A

description: Spotted oligo array on glass. The whole maize array set 1.2 version contains 56310 unique probes from maize and array A contains 29132 of them. The number of total spots including empty and controls is 32448.


title: Maize oligo array version 1.1 array A

description: Spotted oligo array on glass. The whole maize array set 1.1 version contains 55550 unique probes from maize and array A contains 28833 of them. The number of total spots including empty and controls is 32448.


title: Tiling microarray analysis of rice indica chromosome 10 (reverse strand)

first: Xing-Wang

last: Deng

description:
Oligo nucleotides 36mer in length are designed to represent sense and antisense strands of the nonrepetitive DNA of the japonica and indica rice chromosome 10. The probes were selected from the April 12, 2004 japonica genome sequence (TIGR rice annotation 2.0) and the August 1, 2003 indica sequence from BGI. Microarrays containing these oligos are synthesized on glass with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis units (NimbleGen Systems, Madison, WI).
Keywords = transcription
Keywords = gene expression
Keywords = rice

first: Lei

last: Li

first: Xiangfeng

last: Wang

first: Mian

last: Xia

first: Viktor

last: Stolc

first: Ning

last: Su

first: Zhiyu

last: Peng

first: Songgang

first: Waraporn

last: Tongprasit

first: Jun

first: Xiping

first: Xingwang


title: Rosetta (Merck) Genome Tiling Experiment PatternID 891

first: Stephen

first: Eric

first: Debraj

first: Dan

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas


title: Rosetta (Merck) Genome Tiling Experiment PatternID 890

first: Stephen

last: Edwards

first: Eric

last: Schadt

last: GuhaThakurta

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

last: Li

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 893

first: Debraj

first: Dan

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

first: Guy

last: Cavet

last: Castle

last: Kan

last: Chen


title: ATH whole genome chip 12

first: Waraporn

last: Tongprasit

state: CA

description: 36-mer probes covering about every 10 bps of Arabidopsis Thaliana genome

first: Viktor

last: Stolc

first: Manoj

last: Samanta

first: Himanshu

last: Sethi

first: Shoudan

last: Liang

first: David

last: Nelson

first: Adrian

last: Hegeman

first: Clark

last: Rancour

first: Sebastian

last: Bednarek

first: Eldon

last: Ulrich

first: Qin

last: Zhao

first: Russell

last: Wrobel

first: Craig

last: Newman

first: Brian

last: Fox

first: George

last: Phillips

first: John

last: Markley

first: Michael

last: Sussman


title: Rosetta (Merck) Genome Tiling Experiment PatternID 889

first: Stephen

last: Edwards

state: WA

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Tiling microarray analysis of rice japonica chromosome 10(forward strand)

first: Xing-Wang

last: Deng

description: Oligo nucleotides 36mer in length are designed to represent sense and antisense strands of the nonrepetitive DNA of the japonica and indica rice chromosome 10. The probes were selected from the April 12, 2004 japonica genome sequence (TIGR rice annotation 2.0) and the August 1, 2003 indica sequence from BGI. Microarrays containing these oligos are synthesized on glass with Expedite DNA synthesizers (Applied Biosystems, Foster City, CA) in conjunction with Maskless Array Synthesis units (NimbleGen Systems, Madison, WI).

first: Lei

first: Xiangfeng

last: Wang

first: Mian

last: Xia

first: Viktor

last: Stolc

first: Ning

last: Su

first: Zhiyu

last: Peng

first: Songgang

first: Waraporn

last: Tongprasit

first: Jun

first: Xiping

first: Xingwang


title: Rosetta (Merck) Genome Tiling Experiment PatternID 887

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

first: Andrew

first: Mihai

first: Mike

first: Jason


title: Rosetta (Merck) Genome Tiling Experiment PatternID 886

first: Stephen

first: Eric

last: Chen

last: Kasarskis

last: Margarint

last: Caceres

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: ATH whole genome chip 10

first: Waraporn

last: Tongprasit

first: Viktor

last: Stolc

first: Manoj

last: Samanta

first: Himanshu

last: Sethi

first: Shoudan

last: Liang

first: David

last: Nelson

first: Adrian

last: Hegeman

first: Clark

last: Rancour

first: Sebastian

last: Bednarek

first: Eldon

last: Ulrich

first: Qin

last: Zhao

first: Russell

last: Wrobel

first: Craig

last: Newman

first: Brian

last: Fox

first: George

last: Phillips

last: Markley

first: Michael

last: Sussman


title: Rosetta (Merck) Genome Tiling Experiment PatternID 884

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 883

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik


title: ATH whole genome chip 6

first: Waraporn

last: Tongprasit

first: Viktor

last: Stolc

first: Manoj

last: Samanta

first: Himanshu

last: Sethi

first: Shoudan

last: Liang

first: David

last: Nelson

first: Adrian

last: Hegeman

first: Clark

last: Rancour

first: Sebastian

last: Bednarek

first: Eldon

last: Ulrich

first: Qin

last: Zhao

first: Russell

last: Wrobel

first: Craig

last: Newman

first: Brian

last: Fox

first: George

last: Phillips

first: John

last: Markley

first: Michael

last: Sussman


title: ATH whole genome chip 4

first: Waraporn

last: Tongprasit


title: Rosetta (Merck) Genome Tiling Experiment PatternID 881

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: ATH whole genome chip 8

first: Waraporn

last: Tongprasit

first: Viktor

last: Stolc

first: Manoj

last: Samanta

first: Himanshu

last: Sethi

first: Shoudan

last: Liang

first: David

last: Nelson

first: Adrian

last: Hegeman

first: Clark

last: Rancour

first: Sebastian

last: Bednarek

first: Eldon

last: Ulrich

first: Qin

last: Zhao

first: Russell

last: Wrobel

first: Craig

last: Newman

first: Brian

last: Fox

first: George

last: Phillips

first: John

last: Markley

first: Michael

last: Sussman


title: Rosetta (Merck) Genome Tiling Experiment PatternID 874

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 875

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

last: Svetnik

first: John


title: ATH Whole genome chip 1

first: Waraporn

last: Tongprasit

first: Viktor

last: Stolc

first: Manoj

last: Samanta

first: Himanshu

last: Sethi

first: Shoudan

last: Liang

first: David

last: Nelson

first: Adrian

last: Hegeman

first: Clark

last: Rancour

first: Sebastian

last: Bednarek

first: Eldon

last: Ulrich

first: Qin

last: Zhao

first: Russell

last: Wrobel

first: Craig

last: Newman

first: Brian

last: Fox

first: George

last: Phillips

last: Markley

first: Michael

last: Sussman


title: Rosetta (Merck) Genome Tiling Experiment PatternID 871

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Soll albicans

status: Public on Dec 01 2004

city: Iowa City

first: Rui

last: Zhao

state: IA

department: Biological Sciences

institute: The University of Iowa

organism: Candida albicans

description: C. albicans Array-Ready Genome Oligo Set Version 1.1 (Qiagen, Valencia, CA) was resuspended at a concentration of 20uM in 150mM sodium phosphate buffer (pH 8.5). Oligos were printed in duplicate blocks on Code Link slides (Amersham Biosciences) at Microarray, Inc. DNA coupling and post-coupling processing of printed microarray slides were done according to the manufacturere's instructions (Amersham Biosciences).

first: Karla

last: Daniels

first: Shawn

last: Lockhart

first: Kathleen

last: Yeater

first: Lois

last: Hoyer

first: David

last: Soll


title: SARST microarray

status: Public on Nov 19 2004

city: Vancouver

first: Josh

last: Neufeld

state: BC

address: #300-6174 University Blvd.

department: Department of Microbiology & Immunology

institute: University of British Columbia

organism: Bacteria

description:
Comparison of hexachlorocyclohexane (HCH) contaminated soils from Spain with a community-specific microarray.

These results are being submitted for publication and represent the first use of microarrays for analysis of soil DNA and the first community-specific microarray design.
Keywords = SARST
Keywords = microarray
Keywords = RSTs
Keywords = soil
Keywords = bacteria

first: Victor

last: de Lorenzo

first: William

last: Mohn


title: Human MicroRNA Array V7.0

status: Public on Jul 30 2004

city: Chapel Hill

first: Scott

last: Hammond

department: Dept Cell and Developmental Biology

institute: University of North Carolina

description:
Oligonucleotide probes to 156 human microRNA genes were designed, antisense to the mature sequence as reported in the Sanger microRNA registry (4/1/04).  Probes were spotted at 40 uM on Corning GAPS-II slides in 3X SSC, dried, and crosslinked by 600mJ UV.  Slides were prehybridized in 3x SSC, 0.1% SDS, 0.2% BSA for 45 minutes, hybridized for 2h at 37C in 400mM Na2HPO4 pH 7.0, 0.8% BSA,
5% SDS, 12% formamide.
Keywords = microRNA
Keywords = miRNA
Keywords = non-coding RNA

first: Michael

last: Thomson


title: Mammalian microRNA array v4.0

status: Public on Sep 02 2004

description:
Oligonucleotide probes to 124  non-redundant conserved mouse/human microRNA genes were designed, antisense to the mature sequence as published.  Probes were spotted at 40 uM on Corning GAPS-II slides in 3x SSC, dried, and crosslinked by 600 mJ UV.  Slides were prehybridized in 3x SSC, 0.1% SDS, 0.2% BSA for 45 minutes, hybridized for 2h at 37C in 400mM Na2HPO4 pH 7.0, 0.8% BSA, 5% SDS, 12% formamide.
Keywords = microRNA
Keywords = miRNA
Keywords = non-coding RNA


title: Rosetta (Merck) Genome Tiling Experiment PatternID 894

first: Stephen

last: Edwards

department: Research Genetics

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres


title: Rosetta (Merck) Genome Tiling Experiment PatternID 892

first: Stephen

last: Edwards

first: Jason

last: Johnson

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 888

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 880

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan


title: Rosetta (Merck) Genome Tiling Experiment PatternID 882

first: Stephen

last: Edwards

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 879

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 878

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell


title: Rosetta (Merck) Genome Tiling Experiment PatternID 876

first: Stephen

last: Edwards

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 877

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 865

first: Dan

last: Holder

first: Lisa

last: Ying

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 852

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 857

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 851

first: Dan

last: Holder

first: Lisa

last: Ying

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 860

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 855

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 859

first: Dan

last: Holder

first: Lisa

last: Ying

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 861

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 854

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 873

first: Dan

last: Holder

first: Lisa

last: Ying

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 866

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 862

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 868

first: Dan

last: Holder

first: Lisa

last: Ying

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 864

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 863

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 850

first: Dan

last: Holder

first: Lisa

last: Ying

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 846

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 845

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 858

first: Dan

last: Holder

first: Lisa

last: Ying

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 856

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 885

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 844

first: Dan

last: Holder

first: Lisa

last: Ying

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 872

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 869

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 867

first: Dan

last: Holder

first: Lisa

last: Ying

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 870

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 853

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 849

first: Dan

last: Holder

first: Lisa

last: Ying

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 847

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 848

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 840

first: Dan

last: Holder

first: Lisa

last: Ying

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 842

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 841

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 837

first: Dan

last: Holder

first: Lisa

last: Ying

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 835

first: Stephen

last: Edwards

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 836

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 834

first: Dan

last: Holder

first: Lisa

last: Ying

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Agilent Custom Mouse Alternative Splicing Oligo Microarray

status: Public on Dec 22 2004

city: Toronto

first: Qun

last: Pan

address: 160 College St.

institute: University of Toronto

description:
A new quantitative alternative splicing microarray platform. We describe the application of a new microarray platform, which combines information from exon body and splice-junction probes, to analyze the regulation of 3126 alternative splicing events in ten mouse tissues. The details of the methods and algorithms are described in this paper: Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform (Molecular Cell, Dec., 2004)
Keywords = A new quantitative alternative splicing microarray platform

first: Ofer

last: Shai

first: Christine

last: Misquitta

first: Wen

last: Zhang

first: Arneet

last: Saltzman

first: Naveed

last: Mohammad

first: Tomas

last: Babak

first: Henry

last: Siu

first: Timothy

last: Hughes

first: Quaid

last: Morris

first: Brendan

last: Frey

first: Benjamin

last: Blencowe


title: Rosetta (Merck) Genome Tiling Experiment PatternID 839

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 843

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 833

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart


title: Rosetta (Merck) Genome Tiling Experiment PatternID 838

first: Archie

last: Russell

first: Guoya

last: Li

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 832

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 830

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 829

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 831

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 828

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 825

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 827

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 826

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 819

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 818

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 823

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 824

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 821

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 820

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 822

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 807

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 809

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 804

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 816

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 815

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 814

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 803

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 812

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 811

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 801

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 336

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 810

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 331

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 802

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 337

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 326

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 806

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 327

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 817

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 805

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 324

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 333

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 318

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 319

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 813

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 317

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 335

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 316

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 332

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 314

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 312

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 808

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 334

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 320

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 328

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 325

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 322

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 310

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 321

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 278

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 280

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 279

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 282

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 283

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 277

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 313

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 268

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 267

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 276

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 311

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 284

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 281

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 264

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 275

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 273

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 262

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 272

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 260

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 323

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 271

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 258

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 257

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 270

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: GenomeWideEVG_MRK2219

first: Stephen

last: Edwards

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2219.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Submitted for Nature Genetics publication: Schadt, Edwards, et al.
Keywords = EVG transcript index oligonucleotide

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 266

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 315

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 274

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 255

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: GenomeWideEVG_MRK2218

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2218.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 265

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: GenomeWideEVG_MRK2215

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2215.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: GenomeWideEVG_MRK2216

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2216.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: GenomeWideEVG_MRK2214

first: Stephen

last: Edwards

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2214.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: Rosetta (Merck) Genome Tiling Experiment PatternID 261

description:
Oligonucleotide array on glass.
Contains 60mer probes covering non-repetitive regions on chromosomes 20 & 22 in 30bp steps arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = genome tiling oligonucleotide

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 263

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 259

first: Stephen

last: Edwards

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: Rosetta (Merck) Genome Tiling Experiment PatternID 254

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: GenomeWideEVG_MRK2209

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2209.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: GenomeWideEVG_MRK2212

first: Stephen

last: Edwards

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2212.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Eric

last: Schadt

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: Rosetta (Merck) Genome Tiling Experiment PatternID 269

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: GenomeWideEVG_MRK2217

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2217.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: GenomeWideEVG_MRK2205

first: Stephen

last: Edwards

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2205.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Eric

last: Schadt

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: GenomeWideEVG_MRK2206

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2206.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: GenomeWideEVG_MRK2211

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2211.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li


title: GenomeWideEVG_MRK2213

first: Stephen

last: Edwards

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2213.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Eric

last: Schadt

first: Guy

last: Cavet

first: John

last: Castle

first: Zhengyan

last: Kan

first: Ronghua

last: Chen


title: GenomeWideEVG_MRK2207

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2207.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Debraj

last: GuhaThakurta

first: Dan

last: Holder

first: Andrew

last: Kasarskis

first: Mihai

last: Margarint

first: Mike

last: Caceres

first: Jason

last: Johnson


title: Rosetta (Merck) Genome Tiling Experiment PatternID 256

first: Lisa

last: Ying

first: Vladimir

last: Svetnik

first: Christopher

last: Armour

first: Philip

last: Garrett-Engele

first: Nicholas

last: Tsinoremas

first: Daniel

last: Shoemaker


title: GenomeWideEVG_MRK2201

first: Stephen

last: Edwards

description:
Rosetta (Merck) Expression Validated Genes (EVG) from a Genome Wide Comprehensive Transcript Index (CTI) PatternID 2201.
Oligonucleotide array on glass.
Contains 60mer probes designed against a genome wide comprehensive transcript index arrayed on Rosetta/Agilent ink-jet arrays.
Keywords = EVG transcript index oligonucleotide

first: Eric

last: Schadt

first: Amy

last: Leonardson

first: Kyle

last: Hart

first: Archie

last: Russell

first: Guoya

last: Li