title: Agilent-031164 Peach-with-probes-verified

status: Public on Oct 29 2015

city: Padova

first: Gerolamo

last: Lanfranchi

address: Via U. Bassi, 58/B

department: CRIBI - Biotechnology Center and Biology Department

country: Italy

institute: University of Padova

organism: Prunus persica

technology: in situ oligonucleotide

description:
Probes-blast-verified

Arrays of this design have barcodes that begin with 16031164 or 2531164.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.

distribution: custom-commercial

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: TaqMan® Array Human MicroRNA A+B Cards Set v3.0

status: Public on Jan 12 2016

city: Bethesda

first: Colin

middle: L

last: Sweeney

state: MD

address: Building 10-CRC, Room 5-3888, 10 Center Drive

department: NIAID - Genetic Immunotherapy Section

country: USA

institute: NIH

organism: Homo sapiens

technology: RT-PCR

manufacture_protocol: see manufacturer's website


title: miRCURY LNA™ microRNA Array V11.0- hsa, mmu & rno

status: Public on Sep 11 2015

city: Tainan

first: Desy

middle: S

last: Lee

address: University Road

country: Taiwan

institute: NCKU

organism:
Homo sapiens
Mus musculus
Rattus norvegicus

technology: spotted oligonucleotide

manufacture_protocol: Exiqon's miRCURY LNA™ microRNA Array system is a complete system for global microRNA expression profiling. The system is based on the LNA™-technology, which offers unique advantages in the specific and sensitive detection of short RNA sequences.


title: Murine 15K Spotted cDNA array

status: Public on Jun 30 2015

city: Bad nauheim

first: Sirisha

last: Cheedipudi

state: Hessen

department: cardiac origin cell lines

country: Germany

institute: Max-planck institue for heart and lung research

organism: Mus musculus

technology: spotted DNA/cDNA

distribution: non-commercial

manufacturer: University Health Network, Toronto, Canada

manufacture_protocol: pre spotted


title: GenoToul/ Biopuces platform - Saccharomyces cerevisiae - 15K

city: MONTPELLIER

first: Sylvie

last: Dequin

address: 2 PLACE PIERRE VIALA

country: France

institute: INRA

organism: Saccharomyces cerevisiae

manufacture_protocol: The DNA chips were manufactured at the Biochip platform of Toulouse?Genopole on _ultragaps__ (corning microarray products)_using 70-mer oligonucleotides representing c. 99% of the yeast genome purchased from Operon Inc. _(oligo-set-yeast_V1.1.3) Oligo sequences of the Yeast Genome Oligo Set V1.1 were BLAST against orf_coding.fasta (Dec 17, 2003) downloaded from the SGD. Mapping to the current annotation is based on the BLAST results above. If the oligo has greater than 97% identity to a ORF sequence and the matched ORF name is the same as original ORF name used for oligo design, the oligo represents the new matched ORF. Information in this genelist has been populated using chromosomal_feature.tab (Jan 10, 2004) file of the SGD. For further information, please check Oligo Microarray Database (http://omad.qiagen.com/yeastV1_1/query.php??).


title: Agilent-030893 Rainbow_trout_60KV2 [Feature Number version]

status: Public on Oct 07 2015

city: Rennes

first: Aurelie

last: LE CAM

address: Campus de Beaulieu

department: PHASE

organism: Oncorhynchus mykiss

description:
Arrays of this design have barcodes that begin with 16030893 or 2530893.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: IQUSP Human Intron-Exon 44k v3.0

city: São Paulo

first: Eduardo

middle: Moraes

last: Reis

state: SP

address: Av. Prof. Lineu Prestes, 748

department: Biochemistry

country: Brazil

institute: University of São Paulo

description: Assembly Hg19 was used for genomic coordinates of the probes.

first: Helder

middle: I

last: Nakaya

first: Paulo

middle: P

last: Amaral

first: Rodrigo

last: Louro

first: Sergio

last: Verjovski-Almeida

middle: M

manufacture_protocol: Agilent’s non-contact industrial inkjet printing process uniformly deposits oligo monomers onto specially-prepared glass slides. Custom microarrays are manufactured using Agilent’s non-contact in situ synthesis process of printing 60-mer length oligonucleotide probes, base-by-base, from digital sequence files. This is achieved with an inkjet process which delivers extremely small, accurate volumes (picoliters) of the chemicals to be spotted. Standard phosphoramidite chemistry used in the reactions allows for very high coupling efficiencies to be maintained at each step in the synthesis of the full-length oligonucleotide. Precise quantities are reproducibly deposited “on the fly.” This engineering feat is achieved without stopping to make contact with the slide surface and without introducing surface-contact feature anomalies, resulting in consistent spot uniformity and traceability.


title: CodeLink Mouse Whole Genome Bioarray

city: Paris

first: Nicolas

last: Dérian

address: Bâtiment CERVI, 83 bvd de l'Hôpital

institute: UPMC

description:
A total of 36,000 transcripts and ESTs representing 30,000 unique genes.
Total 300 spots for positive control and 320 spots for negative control.
spotted 30-mer oligonucleotide probe


title: Illumina HiSeq 2500 (Anguilla anguilla)

status: Public on Jun 29 2015

last: GEO

organism: Anguilla anguilla

technology: high-throughput sequencing

distribution: virtual


title: Illumina Genome Analyzer IIx (Anguilla anguilla)


title: Illumina HiSeq 2500 (Moringa oleifera)

organism: Moringa oleifera


title: Exiqon miRCURY LNA microRNA array, 6th generation [miRBase v16, condensed Probe_ID version]

status: Public on Jun 26 2015

city: zhenjiang

first: Jie

last: Tian

state: Jiangsu

address: Xuefu Road 301

department: School of Medicine

country: China

institute: Jiangsu University


title: MYcroarray CAT Staphylococcus aureus subsp. aureus MRSA252 30K 4rep V1

status: Public on Jun 27 2015

city: Monterrey

first: Aldo

middle: Francisco

last: Clemente soto

state: Nuevo Leon

address: Vicente Guerrero

department: Farmacia

country: Mexico

institute: UNIVERSIDAD AUTONOMA DE NUEVO LEÓN

description: CAT-30K-Staphylococcus_aureus_subsp_aureus_MRSA252-oli

manufacture_protocol: in situ oligonucleotide synthesis using phosphoramidite chemistry and proprietary light directed synthesis. More information can be found here: http://www.mycroarray.com/technology/synthesis.html


title: Illumina HumanOmni2.5M-8v1-1_B [data table]

first: GEO

last: admin

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

technology: oligonucleotide beads

description: Illumina HumanOmni25M-8v1-1_B

distribution: commercial

manufacture_protocol: see Illumina web site


title: Qiagen Extracellular Matrix & Adhesion Molecule PCR Array

city: Cleveland

first: Jackelyn

middle: B

last: Golden

state: Ohio

address: 2109 Adelbert Rd

department: Dermatology

institute: Case Western Reserve University

description: PCR assay


title: Illumina HiSeq 2000 (Methanosarcina barkeri str. Fusaro)

organism: Methanosarcina barkeri str. Fusaro


title: NimbleGen Populus_reassigned_version_3.0 [poplar_V3]

city: Corvallis

first: Glenn

last: Howe

state: OR

address: 321 Richardson Hall

department: Forest Ecosystems and Society

institute: Oregon State University

organism: Populus trichocarpa

description:
The original microarray was based on v1.1 of the P. trichocarpa genome sequence and aspen cDNAs, and included random GC and other control probes. Each original gene model was represented by two replicates of three different 60mer probes (GEO accession numbers GPL2699 and GPL7424).
Each probe on the original microarray (GEO accession GPL2699) was reassigned to one gene model from the Populus v3.0 genome assembly.  The new microarray targets 35,048 out of a total of 41,335 Populus v3.0 primary transcripts, with a variable number of 60mer probes per transcript. For probes that could not be assigned to v3.0 transcripts, we retained the original Populus v1.1 gene model or aspen transcript assignment (9,393 gene models).
We used BLASTN to reassign the probe sequences from GPL2699/GPL7424 to the transcript sequences from the Populus v3.0 genome assembly (file Ptrichocarpa_210_transcript.fa released as part of Phytozome v9.0; http://www.phytozome.net/).  We assigned each array probe to one v3.0 gene model, omitting the filtering of low-complexity probes and using a 75% nucleotide identity cutoff.
The .ndf and .ngd files are linked below as supplementary files.

designname=poplar_V3
designid=1876

native array description file:
2014_12_14_Howe_Populus_V3_60mer.ndf
2014_12_14_Howe_Populus_V3_60mer.ngd

manufacture_protocol: Proprietary in situ oligonucleotide synthesis. See manufacturer's website at http://www.nimblegen.com/.


title: PacBio RS II (Ruminococcus sp. HUN007)

organism: Ruminococcus sp. HUN007


title: PacBio RS II (Butyrivibrio sp. AE3004)

organism: Butyrivibrio sp. AE3004


title: PacBio RS II (Butyrivibrio sp. AE3003)

organism: Butyrivibrio sp. AE3003


title: 121010_HG19_Canc_Immu_CL_CGH

city: Tallahassee

first: Jonathan

last: Dennis

state: Florida

address: 319 Stadium Drive

department: Biological Science

institute: Florida State University

description:
Genome build information: Hg19
2 kilobases surrounding the transcription start sites of 856 cancer and immunity related genes.

manufacture_protocol: Arrays were scanned on a Nimblegen scanner per manufacturer's protocol (http://www.nimblegen.com/products/lit/lit.html).


title: Ion Torrent PGM (Listeria monocytogenes 10403S)

status: Public on Jun 25 2015

organism: Listeria monocytogenes 10403S


title: Illumina HiSeq 1500 (Saccharomyces cerevisiae BY4741)

organism: Saccharomyces cerevisiae BY4741


title: Arabidopsis thaliana V.3.0.3 IFC UNAM

city: Irapuato

first: John P

last: Délano-Frier

state: Guanajuato

address: Km 9.6 del Libramiento Norte Carretera Irapuato-León SN

department: Biotechnology and Biochemistry

institute: CINVESTAV Irapuato

organism: Arabidopsis thaliana

manufacturer: Unidad de Microarreglos, IFC UNAM, México

manufacture_protocol: The thirty thousand 70-mers oligonucleotides (40uM, synthesized by Operon) were printed on 22mm (Y axis) x 75 mm ( X axis) glass slides, coated with super amine (Arraylt) using a SDDC robot (Virtek), organised in 12 meta-rows x 4 meta-columns, with a total number of spots per grid of 25 rows x 25 columns.


title: Illumina MiSeq (Thermococcus)

organism: Thermococcus


title: Ion Torrent Proton (Mycobacterium tuberculosis)

organism: Mycobacterium tuberculosis


title: PacBio RS II (Staphylococcus aureus)

status: Public on Jun 24 2015

organism: Staphylococcus aureus


title: Phospho Explorer Antibody Array (PEX100)

city: St. Peter

first: Sanjive

last: Qazi

state: MN

address: 800 west College Av

department: Biology

institute: Gustavus Adolphus College

organism:
Homo sapiens
Mus musculus
Rattus norvegicus

technology: antibody

manufacture_protocol: See manufacturer's website


title: AbC_ELTE_human_156_v1

status: Public on Mar 06 2016

city: Budapest

first: Krisztian

last: Papp

address: 1/C Pazmany P.

country: Hungary

institute: MTA-ELTE Immunology Research Group

organism:
Homo sapiens
Bos taurus
Capra hircus

technology: spotted peptide or protein

manufacture_protocol: Printing procedure was performed by sciFlexarrayer S11 printer. As substrate ‘FAST® Slides’ (Main Manufacturing) with 16 NC pads were used. Two separed batches were printed in two runs to be prepared enough slides. Setup: sub-array with 13 x 12 (X;Y) spot positions; dot pitch between spots 400μm (X:Y); 1 drop per spot; dispensed size per drop 330 pico liter; each sample printed into 3x replicates (except BB-position spots and PBS negative control)


title: Illumina HiSeq 1000 (Homo sapiens; Mus musculus)

status: Public on Jun 23 2015

organism:
Homo sapiens
Mus musculus


title: Illumina HiSeq 2000 (Actinobacillus pleuropneumoniae serovar 3 str. JL03)


title: Illumina HiSeq 2000 (Ptychodera flava)

organism: Ptychodera flava


title: Illumina HiSeq 2000 (Cicer arietinum)

organism: Cicer arietinum


title: Qiagen porcine array-ready oligo set

city: Pyeongchang

first: Joonghoon

last: Park

state: Kangwon

address: Pyeongchang daero 1447

department: International Agricultural Technology

country: South Korea

institute: Seoul National University

organism: Sus scrofa


title: Agilent-026609 Maize Gene Expression 4x44K Microarray [Feature ID]

city: shanghai

first: qian

last: jin

address: libing road

institute: MSP

organism: Zea mays

description:
Arrays of this design have barcodes that begin with 16026609 or 2526609.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent probe name.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Illumina HiSeq 2000 (Trematomus bernacchii)

status: Public on Jun 22 2015

organism: Trematomus bernacchii


title: Agilent-066335 RCUT-Homo sapiens-4x180K-054261On1M (Probe Name Version)

city: Hannover

first: Oliver

last: Dittrich-Breiholz

address: Carl-Neuberg-Str. 1

department: Research Core Unit Genomics

institute: Medical School Hannover

organism: Homo sapiens

description: This Microarray represents a refined version of the Whole Human Genome Oligo Microarray 4x44K v2 (Design ID 026652, Agilent Technologies), called '054261On1M' (Design ID 066335) developed in the Research Core Unit Transcriptomics of Hannover Medical School. Microarray design was created at Agilent's eArray portal using a 1x1M design format for mRNA expression as template. All non-control probes of design ID 026655 have been selected to be printed five times within a region comprising a total of 181560 Features (170 columns x 1068 rows). Four of such regions were placed within one 1M region, giving rise to four microarray fields per slide to be hybridized individually (Customer Specified Feature Layout). Control probes required for proper Feature Extraction software operation were determined and placed automatically by eArray using recommended default settings.


title: Illumina HiSeq 2500 (Thermosynechococcus elongatus BP-1)

organism: Thermosynechococcus vestitus BP-1


title: Illumina HiSeq 2000 (Gymnodraco acuticeps)

organism: Gymnodraco acuticeps


title: Illumina HiSeq 2000 (Chionodraco hamatus)

organism: Chionodraco hamatus


title: RPPA CORE 081913_0074 (SET 74)

city: Bethesda

first: Uma

middle: T

last: Shankavaram

department: NCI

institute: NIH

manufacturer: RPPA Core Facility MD Anderson Cancer Center

manufacture_protocol: see web site


title: [PrimeView] Affymetrix Human Gene Expression Array [Brainarray ENTREZG Version 19]

description: This is identical to GPL15207 but a custom CDF environment was used to extract data [Brainarray (version 19)].

manufacture_protocol: See details from Affymetrix.


title: Illumina MiSeq (Potato spindle tuber viroid)

organism: Potato spindle tuber viroid


title: Illumina HiSeq 2500 (Colletotrichum incanum)

organism: Colletotrichum incanum


title: Illumina MiSeq (Kluyveromyces marxianus)

organism: Kluyveromyces marxianus


title: Illumina HiSeq 2500 (Colletotrichum tofieldiae)

organism: Colletotrichum tofieldiae


title: BaSysBio Bacillus subtilis T3 array, 2x400K (Agilent-044473)

city: Jouy-en-Josas

first: Tatiana

last: Rochat

address: Domaine de Vilvert

description: Bacillus subtilis subsp. subtilis str. 168 (AL009126.3)

manufacture_protocol: The arrays are produced by Agilent Technologies SurePrint technology (for details, see manufacturer's web site).


title: Bacillus subtilis gene-level annotation representing two designs (090325_CBS_DTU_Bsub_T2; 110831_CBS_DTU_Bsub_T2)

status: Public on Jun 21 2015

organism: Bacillus subtilis subsp. subtilis str. 168

description:
Virtual platform based on two NimbleGen designs:
090325_CBS_DTU_Bsub_T2
110831_CBS_DTU_Bsub_T2

manufacture_protocol: See manufacturer website


title: Illumina MiSeq (Solanum lycopersicum)

status: Public on Jun 19 2015

organism: Solanum lycopersicum


title: Agilent-061583 S_sala_calibration_array_1

city: Ploen

first: Till

last: Czypionka

address: August-Thienemann-Strasse 2

department: Evolutionary Genetics

institute: MPI for Evolutionary Biology

organism: Salamandra salamandra

description:
First S.salamandra array based on Illumina sequencing. For probe calibration and selection and for first body vs. tail comparison.

Please note that annotation was performed by homology searches which yielded various GenBank IDs only for top BLAST hits (included in the supplementary file 'GEOplatform.supplement.txt'.

Arrays of this design have barcodes that begin with 16061583 or 2561583.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Probe name

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Agilent-034461 WilmsArray_v1.0 (Feature Number)

city: MADRID

first: LARA

last: RODRIGUEZ

address: PASEO DE LA CASTELLANA 261

department: GEF

country: Spain

institute: INGEMM

description:
Arrays of this design have barcodes that begin with 16034461 or 2534461.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-037637 WilmsArray_v2.0 037636 (Feature Number)

description:
Arrays of this design have barcodes that begin with 16037637 or 2537637.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-028103 Aggregatibacter actinomycetemcomitans Pangenome Microarray

city: Seattle

first: Weerayuth

last: Kittichotirat

state: WA - Washington

address: 960 Republican st

department: Microbiology

institute: University of Washington

organism: Aggregatibacter actinomycetemcomitans

description:
This array is designed based on AaHa GeneTable 100728 (http://expression.washington.edu/genetable/script/gene_table_viewer?organism=aa_ha&build=10_07_28)
Arrays of this design have barcodes that begin with 16028103 or 2528103.
Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
The ID column represents the Agilent Feature Extraction feature number.
Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.

first: Roger

last: Bumgarner

first: Casey

last: Chen


title: Agilent-037360 gallus_exp_microarray_SLagarrigue_8x60k_V1

status: Public on Jun 20 2015

city: Rennes

first: Sandrine

last: Lagarrigue

address: UMR PEGASE, Agrocampus ouest, 65, rue de saint Brieuc

institute: Agrocampus OUEST

organism: Gallus gallus

description:
version1_sl_gallus avec support 8x60k

Arrays of this design have barcodes that begin with 16037360 or 2537360.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-049276 Drosophila melanogaster Amp and UR with 8A

status: Public on Jun 18 2015

city: Cambridge

first: Terry

middle: L.

last: Orr-Weaver

state: MA

address: 9 Cambridge Center

institute: Whitehead Institute for Biomedical Research

organism: Drosophila melanogaster

description:
Arrays of this design have barcodes that begin with 16049276 or 2549276.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-025521 Drosophila melanogaster Amp and UR 4X180

description:
Amp and UR regions

Arrays of this design have barcodes that begin with 16025521 or 2525521.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-026609 Maize Gene Expression 4x44K Microarray [Probe Name Version]


title: Illumina HiSeq 1500 (Mycobacterium smegmatis str. MC2 155)

last: GEO

organism: Mycolicibacterium smegmatis MC2 155


title: Escherichia coli BL21-D23 30K

city: Seoul

first: Hyeon-Cheol

last: Lee

address: 136, Changgyeonggung-ro,Jongro-gu

department: Research center

institute: BPgene Co., Ltd.

organism: Escherichia coli BL21

manufacture_protocol: ss-DNA is synthesized in situ on glass substrates functionalized with amines. The synthesis process is proprietary but uses digital micromirror mediated photolithography to generate sufficient acid locally to remove acid labile protecting groups on 5'-terminal phosphoramidite monomers where the next phosphoramidite base will be coupled. The arrays can be used to hybridize cRNA or cDNA


title: Arabidopsis Oligonucleotide Microarrays Version 3.0, 70 -mer-oligonucleotide

status: Public on Jun 16 2015

city: saskatoon

first: daoquan

last: xiang

state: SK

address: 110 Gymnasium Place

country: Canada

institute: NRC Saskatoon

organism: Arabidopsis thaliana


title: Phalanx Mouse miRNA OneArray Ver 6 (miRBase Release 20)

status: Public on Jun 17 2015

city: Hsinchu

first: Sandy

last: Lin

address: 6F, NO.6 Technology Road 5

department: Product Dept.

institute: Phalanx Biotech Inc

organism: Mus musculus

manufacture_protocol: See http://www.phalanxbiotech.com/ for updated protocols


title: Phalanx Human miRNA OneArray Ver 6 (miRBase Release 20)

organism: Homo sapiens


title: PacBio RS II (Xylella fastidiosa Temecula1)

status: Public on Jun 15 2015

organism: Xylella fastidiosa Temecula1


title: Phalanx Rat miRNA OneArray Ver 6 (miRBase Release 20)

organism: Rattus norvegicus


title: Ion Torrent PGM (Candida glabrata)

organism: Nakaseomyces glabratus


title: PacBio RS II (Verrucomicrobia bacterium LP2A)

organism: Verrucomicrobia bacterium LP2A


title: PacBio RS II (Xanthobacter sp. 91)

organism: Xanthobacter sp. 91


title: [EquGene-1_1-st] Equus caballus Gene 1.1 ST Array [transcript (gene) version]

city: Santa Clara

last: Affymetrix

state: CA

institute: Affymetrix, Inc.

organism: Equus caballus

description:
#%create_date=Wed Apr  2 13:06:24 2014 PDT
#%chip_type=EquGene-1_1-st-v1
#%lib_set_name=EquGene-1_1-st
#%lib_set_version=v1
#%genome-species=Equus caballus
#%genome-version=equcab2
#%genome-version-ucsc=equcab2
#%genome-lifted-method=NONE
#%genome-lifted_from-species=Equus caballus
#%genome-lifted_from-version-ucsc=equcab2
#%netaffx-annotation-date=2013-08-30
#%netaffx-annotation-netaffx-build=34

manufacture_protocol: See manufacturer's web site


title: Phalanx Rat OneArray Ver. 2 Release 1


title: PacBio RS II (Veillonella parvula DSM 2008)

organism: Veillonella parvula DSM 2008


title: PacBio RS II (Treponema succinifaciens DSM 2489)

organism: Treponema succinifaciens DSM 2489


title: PacBio RS II (Treponema denticola ATCC 35405)

organism: Treponema denticola ATCC 35405


title: PacBio RS II (Tolumonas sp. BRL6-1)

organism: Tolumonas lignilytica


title: PacBio RS II (Xenorhabdus nematophila ATCC 19061)

organism: Xenorhabdus nematophila ATCC 19061


title: Agilent-019555 Homo sapiens 15K Muscle_WDM_1_Of_1

city: Helsinki

first: Peter

last: Hackman

address: Haartmaninkatu 8

department: Dpt. of Medical Genetics

country: Finland

institute: Folkhälsan research Center/University of Helsinki

description:
Muscle WDM expression

Arrays of this design have barcodes that begin with 16019555 or 2519555.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: PacBio RS II (Thiomonas sp. FB-6)

organism: Thiomonas sp. FB-6


title: PacBio RS II (Zymomonas mobilis subsp. pomaceae ATCC 29192)


title: PacBio RS II (Thiomicrospira sp. MA2-6)

organism: Hydrogenovibrio sp. MA2-6


title: PacBio RS II (Thiomicrospira kuenenii DSM 12350)

organism: Hydrogenovibrio kuenenii DSM 12350


title: PacBio RS II (Thiomicrospira pelophila DSM 1534)

organism: Thiomicrospira pelophila DSM 1534


title: PacBio RS II (Thiomicrospira crunogena XCL-2)

organism: Hydrogenovibrio crunogenus XCL-2


title: PacBio RS II (Thiobacillus denitrificans ATCC 25259)

organism: Thiobacillus denitrificans ATCC 25259


title: PacBio RS II (Thioalkalivibrio sp. ARh3)

organism: Thioalkalivibrio sp. ARh3


title: PacBio RS II (Thermosipho melanesiensis BI429)

organism: Thermosipho melanesiensis BI429


title: PacBio RS II (Thermoplasma volcanium GSS1)

organism: Thermoplasma volcanium GSS1


title: PacBio RS II (Thermogemmatispora carboxidivorans)

organism: Thermogemmatispora carboxidivorans


title: PacBio RS II (Thermoplasma acidophilum DSM 1728)

organism: Thermoplasma acidophilum DSM 1728


title: PacBio RS II (Thermobacillus composti KWC4)

organism: Thermobacillus composti KWC4


title: PacBio RS II (Thermoanaerobacter sp. X514)

organism: Thermoanaerobacter sp. X514


title: PacBio RS II (Thermanaerovibrio acidaminovorans DSM 6589)


title: PacBio RS II (Thermacetogenium phaeum DSM 12270)

organism: Thermacetogenium phaeum DSM 12270


title: PacBio RS II (Teredinibacter sp. 1162T.S.0a.05)


title: PacBio RS II (Teredinibacter sp. 991H.S.0a.06)

organism: Teredinibacter turnerae


title: PacBio RS II (Sulfurospirillum barnesii SES-3)

organism: Sulfurospirillum barnesii SES-3


title: PacBio RS II (Syntrophobotulus glycolicus DSM 8271)

organism: Syntrophobotulus glycolicus DSM 8271


title: PacBio RS II (Syntrophothermus lipocalidus DSM 12680)

organism: Syntrophothermus lipocalidus DSM 12680


title: PacBio RS II (Streptobacillus moniliformis DSM 12112)

organism: Streptobacillus moniliformis DSM 12112


title: PacBio RS II (Sulfurimonas denitrificans DSM 1251)

organism: Sulfurimonas denitrificans DSM 1251


title: PacBio RS II (Streptomyces sp. WMMB 714)

organism: Streptomyces sp. WMMB 714


title: PacBio RS II (Sulfolobus acidocaldarius DSM 639)

organism: Sulfolobus acidocaldarius DSM 639


title: PacBio RS II (Streptococcus equinus)

organism: Streptococcus equinus


title: PacBio RS II (Staphylothermus marinus F1)

organism: Staphylothermus marinus F1


title: PacBio RS II (Staphylococcus epidermidis AG42)

organism: Staphylococcus epidermidis AG42


title: PacBio RS II (Staphylococcus aureus subsp. aureus USA300_TCH1516)


title: PacBio RS II (Sporocytophaga myxococcoides DSM 11118)

organism: Sporocytophaga myxococcoides DSM 11118


title: PacBio RS II (Spirochaeta smaragdinae DSM 11293)

organism: Sediminispirochaeta smaragdinae DSM 11293


title: PacBio RS II (Spirochaeta thermophila DSM 6578)

organism: Winmispira thermophila DSM 6578


title: PacBio RS II (Streptosporangium roseum DSM 43021)

organism: Streptosporangium roseum DSM 43021


title: PacBio RS II (Spirochaeta africana DSM 8902)

organism: Spirochaeta africana DSM 8902


title: PacBio RS II (Treponema caldarium DSM 7334)

organism: Gracilinema caldarium DSM 7334


title: PacBio RS II (Sphingomonas melonis C3)

organism: Sphingomonas melonis C3


title: PacBio RS II (Solitalea canadensis DSM 3403)

organism: Solitalea canadensis DSM 3403


title: PacBio RS II (Sphaerobacter thermophilus DSM 20745)

organism: Sphaerobacter thermophilus DSM 20745


title: PacBio RS II (Sinorhizobium medicae WSM1115)

organism: Sinorhizobium medicae WSM1115


title: PacBio RS II (Sediminibacterium sp. OR53)

organism: Asinibacterium sp. OR53


title: PacBio RS II (Selenomonas ruminantium AB3002)

organism: Selenomonas sp. AB3002


title: PacBio RS II (Sebaldella termitidis ATCC 33386)

organism: Sebaldella termitidis ATCC 33386


title: PacBio RS II (Saccharomonospora viridis DSM 43017)

organism: Saccharomonospora viridis DSM 43017


title: PacBio RS II (Ruminococcus sp. NK3A76)

organism: Ruminococcus sp. NK3A76


title: PacBio RS II (Ruminococcus flavefaciens AE3010)

organism: Ruminococcus flavefaciens AE3010


title: PacBio RS II (Shewanella woodyi ATCC 51908)

organism: Shewanella woodyi ATCC 51908


title: PacBio RS II (Selenomonas ruminantium AC2024)

organism: Selenomonas ruminantium AC2024


title: PacBio RS II (Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7)


title: PacBio RS II (Salmonella enterica subsp. arizonae serovar 62:z4,z23:-)


title: PacBio RS II (Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150)


title: PacBio RS II (Sediminibacter sp. Hel_I_10)

organism: Sediminibacter sp. Hel_I_10


title: PacBio RS II (Salmonella bongori NCTC 12419)

organism: Salmonella bongori NCTC 12419


title: PacBio RS II (Ruminococcus gnavus AGR2154)

organism: Mediterraneibacter gnavus AGR2154


title: PacBio RS II (Robinsoniella sp. KNHs210)

organism: Robinsoniella sp. KNHs210


title: PacBio RS II (Ruminococcaceae bacterium AE2021)

organism: Ruminococcaceae bacterium AE2021


title: PacBio RS II (Rikenella microfusus DSM 15922)

organism: Rikenella microfusus DSM 15922


title: PacBio RS II (Rhodopseudomonas palustris CGA009)

organism: Rhodopseudomonas palustris CGA009


title: PacBio RS II (Rhizobium etli CIAT 652)

organism: Rhizobium etli CIAT 652


title: PacBio RS II (Ruminococcus albus AD2013)

organism: Ruminococcus albus AD2013


title: PacBio RS II (Pyrococcus horikoshii OT3)

organism: Pyrococcus horikoshii OT3


title: PacBio RS II (Pseudomonas stutzeri RCH2)

organism: Stutzerimonas stutzeri RCH2


title: PacBio RS II (Pseudomonas aeruginosa NCAIM B.001380)

organism: Pseudomonas aeruginosa NCAIM B.001380


title: PacBio RS II (Prevotella sp. HUN102)

organism: Prevotella sp. HUN102


title: PacBio RS II (Prevotella sp. 10(H))

organism: Prevotella sp. 10(H)


title: PacBio RS II (Pontibacter actiniarum DSM 19842)

organism: Pontibacter actiniarum DSM 19842


title: PacBio RS II (Pedobacter heparinus DSM 2366)

organism: Pedobacter heparinus DSM 2366


title: PacBio RS II (Polaromonas sp. EUR3 1.2.1)

organism: Polaromonas sp. EUR3 1.2.1


title: PacBio RS II (Pediococcus acidilactici AGR20)

organism: Pediococcus acidilactici AGR20


title: PacBio RS II (Planctopirus limnophila DSM 3776)

organism: Planctopirus limnophila DSM 3776


title: PacBio RS II (Polycyclovorans algicola TG408)

organism: Polycyclovorans algicola TG408


title: PacBio RS II (Psychrilyobacter atlanticus DSM 19335)

organism: Psychrilyobacter atlanticus DSM 19335


title: PacBio RS II (Parabacteroides distasonis ATCC 8503)

organism: Parabacteroides distasonis ATCC 8503


title: PacBio RS II (Patulibacter minatonensis DSM 18081)

organism: Patulibacter minatonensis DSM 18081


title: PacBio RS II (Phaeobacter inhibens DSM 17395)

organism: Phaeobacter inhibens DSM 17395


title: PacBio RS II (Oxalobacteraceae bacterium AB_14)

organism: Oxalobacteraceae bacterium AB_14


title: PacBio RS II (Persephonella)

organism: Persephonella


title: PacBio RS II (Peptostreptococcaceae bacterium VA2)

organism: Peptostreptococcaceae bacterium VA2


title: PacBio RS II (Orenia marismortui DSM 5156)

organism: Orenia marismortui DSM 5156


title: PacBio RS II (Pelobacter seleniigenes DSM 18267)

organism: Pelobacter seleniigenes DSM 18267


title: PacBio RS II (Oceanicola sp. HL-35)

organism: Oceanicola sp. HL-35


title: PacBio RS II (Nocardia sp. BMG51109)

organism: Nocardia sp. BMG51109


title: PacBio RS II (Nocardia sp. BMG111209)

organism: Nocardia sp. BMG111209


title: PacBio RS II (Nitriliruptor alkaliphilus DSM 45188)

organism: Nitriliruptor alkaliphilus DSM 45188


title: PacBio RS II (Nitratifractor salsuginis DSM 16511)

organism: Nitratifractor salsuginis DSM 16511


title: PacBio RS II (Niabella soli DSM 19437)

organism: Niabella soli DSM 19437


title: PacBio RS II (Neisseria meningitidis FAM18)

organism: Neisseria meningitidis FAM18


title: PacBio RS II (Methylophilus sp. 5)

organism: Methylophilus sp. 5


title: PacBio RS II (Mycoplasma bovis PG45)

organism: Mycoplasmopsis bovis PG45


title: PacBio RS II (Neisseria gonorrhoeae FA 1090)

organism: Neisseria gonorrhoeae FA 1090


title: PacBio RS II (Microbacterium sp. KROCY2)

organism: Microbacterium sp. KROCY2


title: PacBio RS II (Methylotenera sp. 73s)

organism: Methylotenera sp. 73s


title: PacBio RS II (Methylophilus sp. 1)

organism: Methylophilus sp. 1


title: PacBio RS II (Methylophilus sp. 42)

organism: Methylophilus sp. 42


title: PacBio RS II (Methylophilaceae bacterium 11)

organism: Methylophilaceae bacterium 11


title: PacBio RS II (Methylotenera versatilis 79)

organism: Methylotenera versatilis 79


title: PacBio RS II (Methylohalobius crimeensis 10Ki)

organism: Methylohalobius crimeensis 10Ki


title: PacBio RS II (Methylocystis sp. LW5)

organism: Methylocystis sp. LW5


title: PacBio RS II (Methylobacterium sp. 10)

organism: Methylobacterium sp. 10


title: PacBio RS II (Methylobacter tundripaludum 21/22)

organism: Methylobacter tundripaludum 21/22


title: PacBio RS II (Methylobacterium extorquens AM1)

organism: Methylorubrum extorquens AM1


title: PacBio RS II (Methylobacterium sp. EUR3 AL-11)

organism: Methylobacterium sp. EUR3 AL-11


title: PacBio RS II (Methanothermus fervidus DSM 2088)

organism: Methanothermus fervidus DSM 2088


title: PacBio RS II (Methanospirillum hungatei JF-1)

organism: Methanospirillum hungatei JF-1


title: PacBio RS II (Methanohalophilus mahii DSM 5219)

organism: Methanohalophilus mahii DSM 5219


title: PacBio RS II (Methanocaldococcus jannaschii DSM 2661)

organism: Methanocaldococcus jannaschii DSM 2661


title: PacBio RS II (Methanocorpusculum labreanum Z)

organism: Methanocorpusculum labreanum Z


title: PacBio RS II (Pseudobutyrivibrio ruminis HUN009)

organism: Pseudobutyrivibrio ruminis HUN009


title: PacBio RS II (Meiothermus ruber DSM 1279)

organism: Meiothermus ruber DSM 1279


title: PacBio RS II (Mastigocladopsis repens PCC 10914)

organism: Mastigocladopsis repens PCC 10914


title: PacBio RS II (Meiothermus chliarophilus DSM 9957)

organism: Calidithermus chliarophilus DSM 9957


title: PacBio RS II (Meiothermus silvanus DSM 9946)

organism: Allomeiothermus silvanus DSM 9946


title: PacBio RS II (Marinithermus hydrothermalis DSM 14884)

organism: Marinithermus hydrothermalis DSM 14884


title: PacBio RS II (Polaribacter sp. Hel_I_88)

organism: Polaribacter sp. Hel_I_88


title: PacBio RS II (Palaeococcus ferrophilus DSM 13482)

organism: Palaeococcus ferrophilus DSM 13482


title: PacBio RS II (Leptolyngbya sp. PCC 6406)

organism: Leptolyngbya sp. PCC 6406


title: PacBio RS II (Maribacter sp. Hel_I_7)

organism: Maribacter sp. Hel_I_7


title: PacBio RS II (Leeuwenhoekiella sp. Hel_I_48)

organism: Flavimarina sp. Hel_I_48


title: PacBio RS II (Lactobacillus plantarum)

organism: Lactiplantibacillus plantarum


title: PacBio RS II (Lactococcus lactis subsp. lactis)

organism: Lactococcus lactis subsp. lactis


title: PacBio RS II (Sedimentitalea nanhaiensis DSM 24252)

organism: Sedimentitalea nanhaiensis DSM 24252


title: PacBio RS II (Lactobacillus brevis AG48)

organism: Levilactobacillus brevis AG48


title: PacBio RS II (Lachnospiraceae bacterium AC2029)

organism: Lachnospiraceae bacterium AC2029


title: PacBio RS II (Lachnobacterium bovis)

organism: Lachnobacterium bovis


title: PacBio RS II (Lachnospiraceae bacterium AC2012)

organism: Lachnospiraceae bacterium AC2012


title: PacBio RS II (Klebsiella sp. BRL6-2)

organism: Klebsiella oxytoca BRL6-2


title: PacBio RS II (Kangiella aquimarina DSM 16071)

organism: Kangiella aquimarina DSM 16071


title: PacBio RS II (Lachnospiraceae bacterium AC2031)

organism: Lachnospiraceae bacterium AC2031


title: PacBio RS II (Hydrogenovibrio marinus DSM 11271)

organism: Hydrogenovibrio marinus DSM 11271


title: PacBio RS II (Joostella marina)

organism: Galbibacter orientalis


title: PacBio RS II (Holophaga foetida DSM 6591)

organism: Holophaga foetida DSM 6591


title: PacBio RS II (Hirschia baltica ATCC 49814)

organism: Hirschia baltica ATCC 49814


title: PacBio RS II (Hippea sp. KM1)

organism: Hippea sp. KM1


title: PacBio RS II (Algoriphagus marincola HL-49)

organism: Algoriphagus marincola HL-49


title: PacBio RS II (Haloterrigena turkmenica DSM 5511)

organism: Haloterrigena turkmenica DSM 5511


title: PacBio RS II (Hippea alviniae EP5-r)

organism: Hippea alviniae EP5-r


title: PacBio RS II (Halomicrobium katesii DSM 19301)

organism: Halomicrobium katesii DSM 19301


title: PacBio RS II (Geovibrio sp. L21-Ace-BES)

organism: Limisalsivibrio acetivorans


title: PacBio RS II (Gillisia limnaea DSM 15749)

organism: Gillisia limnaea DSM 15749


title: PacBio RS II (Gillisia sp. JM1)

organism: Gillisia sp. JM1


title: PacBio RS II (Frankia sp. DC12)

organism: Pseudofrankia sp. DC12


title: PacBio RS II (Flexistipes sinusarabici DSM 4947)

organism: Flexistipes sinusarabici DSM 4947


title: PacBio RS II (Geopsychrobacter electrodiphilus DSM 16401)


title: PacBio RS II (Fervidobacterium nodosum Rt17-B1)

organism: Fervidobacterium nodosum Rt17-B1


title: PacBio RS II (Flavobacterium psychrophilum JIP02/86)

organism: Flavobacterium psychrophilum JIP02/86


title: PacBio RS II (Flexibacter litoralis DSM 6794)

organism: Bernardetia litoralis DSM 6794


title: PacBio RS II (Exiguobacterium oxidotolerans JCM 12280)

organism: Exiguobacterium oxidotolerans JCM 12280


title: PacBio RS II (Exiguobacterium aurantiacum DSM 6208)

organism: Exiguobacterium aurantiacum DSM 6208


title: PacBio RS II (Exiguobacterium acetylicum DSM 20416)

organism: Exiguobacterium acetylicum DSM 20416


title: PacBio RS II (Exiguobacterium antarcticum DSM 14480)

organism: Exiguobacterium antarcticum DSM 14480


title: PacBio RS II (Eubacterium sp. AB3007)

organism: Eubacterium sp. AB3007


title: PacBio RS II (Enterococcus gallinarum)

organism: Enterococcus gallinarum


title: PacBio RS II (Enterobacter aerogenes FGI35)

organism: Klebsiella aerogenes FGI35


title: PacBio RS II (Enterococcus faecalis 68A)

organism: Enterococcus faecalis 68A


title: PacBio RS II (Escherichia coli str. K-12 substr. MG1655)


title: PacBio RS II (Echinicola vietnamensis DSM 17526)

organism: Echinicola vietnamensis DSM 17526


title: PacBio RS II (Dyadobacter fermentans DSM 18053)

organism: Dyadobacter fermentans DSM 18053


title: PacBio RS II (Exiguobacterium sp. GIC31)

organism: Exiguobacterium chiriqhucha


title: PacBio RS II (Desulfovibrio cf. magneticus IFRC170)

organism: Solidesulfovibrio cf. magneticus IFRC170


title: PacBio RS II (Desulfurobacterium sp. TC5-1)

organism: Desulfurobacterium sp. TC5-1


title: PacBio RS II (Desulfovibrio sp. L21-Syr-AB)

organism: Desulfohalovibrio reitneri


title: PacBio RS II (Desulfotignum balticum DSM 7044)

organism: Desulfotignum balticum DSM 7044


title: PacBio RS II (Desulfospira joergensenii DSM 10085)

organism: Desulfospira joergensenii DSM 10085


title: PacBio RS II (Dinoroseobacter shibae DFL 12 = DSM 16493)


title: PacBio RS II (Desulforegula conservatrix Mb1Pa)

organism: Desulforegula conservatrix Mb1Pa


title: PacBio RS II (Corynebacterium aurimucosum ATCC 700975)

organism: Corynebacterium aurimucosum ATCC 700975


title: PacBio RS II (Coraliomargarita akajimensis DSM 45221)

organism: Coraliomargarita akajimensis DSM 45221


title: PacBio RS II (Cohnella panacarvi Gsoil 349)

organism: Cohnella panacarvi Gsoil 349


title: PacBio RS II (Cronobacter)

organism: Cronobacter


title: PacBio RS II (Ruminiclostridium thermocellum DSM 1313)

organism: Acetivibrio thermocellus DSM 1313


title: PacBio RS II (Clostridium sp. KNHs205)

organism: Clostridium sp. KNHs205


title: PacBio RS II (Ruminiclostridium thermocellum ATCC 27405)

organism: Acetivibrio thermocellus ATCC 27405


title: PacBio RS II (Lachnoclostridium phytofermentans KNHs212)


title: PacBio RS II (Lachnoclostridium phytofermentans KNHs2132)


title: PacBio RS II (Clostridium sp. ASBs410)

organism: Clostridium sp. ASBs410


title: PacBio RS II ([Clostridium] mangenotii LM2)

organism: Clostridioides mangenotii LM2


title: PacBio RS II ([Clostridium] methoxybenzovorans SR3)

organism: Lacrimispora indolis SR3


title: PacBio RS II (Clostridium sp. 12(A))

organism: Clostridium sp. 12(A)


title: PacBio RS II ([Clostridium] josui JCM 17888)

organism: Ruminiclostridium josui JCM 17888


title: PacBio RS II (Clostridium perfringens ATCC 13124)

organism: Clostridium perfringens ATCC 13124


title: PacBio RS II (Peptoclostridium difficile 630)

organism: Clostridioides difficile 630


title: PacBio RS II ([Clostridium] indolis DSM 755)

organism: Lacrimispora indolis DSM 755


title: PacBio RS II ([Clostridium] clariflavum 4-2a)

organism: Acetivibrio clariflavus 4-2a


title: PacBio RS II (Clostridium algidicarnis)

organism: Clostridium algidicarnis


title: PacBio RS II (Chloroflexus aggregans DSM 9485)

organism: Chloroflexus aggregans DSM 9485


title: PacBio RS II (Cellulophaga lytica DSM 7489)

organism: Cellulophaga lytica DSM 7489


title: PacBio RS II (Cellulomonas sp. KRMCY2)

organism: Cellulomonas sp. KRMCY2


title: PacBio RS II (Cellulophaga algicola DSM 14237)

organism: Cellulophaga algicola DSM 14237


title: PacBio RS II (Desulfobacca acetoxidans DSM 11109)

organism: Desulfobacca acetoxidans DSM 11109


title: PacBio RS II (Caldithrix abyssi DSM 13497)

organism: Caldithrix abyssi DSM 13497


title: PacBio RS II (Capnocytophaga ochracea DSM 7271)

organism: Capnocytophaga ochracea DSM 7271


title: PacBio RS II (Caldicoprobacter oshimai DSM 21659)

organism: Caldicoprobacter oshimai DSM 21659


title: PacBio RS II (Bryobacter aggregatus MPL3)

organism: Bryobacter aggregatus MPL3


title: PacBio RS II (Butyrivibrio sp. FCS014)

organism: Butyrivibrio sp. FCS014


title: PacBio RS II (Bradyrhizobium elkanii USDA 76)

organism: Bradyrhizobium elkanii USDA 76


title: PacBio RS II (Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088)


title: PacBio RS II (bacterium JKG1)

organism: Kallotenue papyrolyticum


title: PacBio RS II (Bacteroides salanitronis DSM 18170)

organism: Phocaeicola salanitronis DSM 18170


title: PacBio RS II (Bacteroides sp. 14(A))

organism: Bacteroides sp. 14(A)


title: PacBio RS II (Bacillus subtilis subsp. spizizenii str. W23)

organism: Bacillus spizizenii str. W23


title: PacBio RS II (Arthrobacter sp. 31Y)

organism: Arthrobacter sp. 31Y


title: PacBio RS II (Agrobacterium fabrum str. C58)

organism: Agrobacterium fabrum str. C58


title: PacBio RS II (Alteromonas sp. ALT199)

organism: Alteromonas sp. ALT199


title: PacBio RS II (Akkermansia muciniphila ATCC BAA-835)

organism: Akkermansia muciniphila ATCC BAA-835


title: PacBio RS II (Alteromonadaceae bacterium Bs12)

organism: Teredinibacter purpureus


title: PacBio RS II (Aminiphilus circumscriptus DSM 16581)

organism: Aminiphilus circumscriptus DSM 16581


title: PacBio RS II (Alicyclobacillus macrosporangiidus CPP55)


title: PacBio RS II (Arthrobacter chlorophenolicus A6)

organism: Pseudarthrobacter chlorophenolicus A6


title: PacBio RS II (Anoxybacillus flavithermus WK1)

organism: Anoxybacillus flavithermus WK1


title: PacBio RS II (Aminobacterium colombiense DSM 12261)

organism: Aminobacterium colombiense DSM 12261


title: PacBio RS II (Actinosynnema mirum DSM 43827)

organism: Actinosynnema mirum DSM 43827


title: PacBio RS II (Acidovorax sp. JHL-3)

organism: Acidovorax sp. JHL-3


title: PacBio RS II (Actinobacillus succinogenes 130Z)

organism: Actinobacillus succinogenes 130Z


title: PacBio RS II (Acidobacterium sp. PMMR2)

organism: Pseudacidobacterium ailaaui


title: PacBio RS II (Acidobacteriaceae bacterium TAA166)

organism: Acidobacteriaceae bacterium TAA 166


title: PacBio RS II (Acidobacteria bacterium KBS 146)

organism: Acidobacteriaceae bacterium KBS 146


title: PacBio RS II (Acetobacterium woodii DSM 1030)

organism: Acetobacterium woodii DSM 1030


title: Custom Incyte GEM1 8.7k cDNA microarray

city: Rockville

first: Mervi

last: Heiskanen

address: 9609 Medical Center Drive, 1W378

department: CBIIT

institute: NCI

organism: Homo sapiens

manufacture_protocol: The Incyte mouse GEM1 set of cDNA clones containing 8700 features was arrayed on polylysine coated glass slides at the National Cancer Institute Advanced Technology Center.


title: Human 14K 70mer Oligo Array

status: Public on Jun 13 2015

city: Calgary

first: Don

last: Morris

address: 1331, 29th Street, NW

department: Oncology

institute: Tom Baker Cancer Centre

manufacturer: Southern Alberta Microarray Facility at The University of Calgary, Canada

manufacture_protocol:
Human Genome Oligo Set(14K) from Qiagen, 70mer length was dissolved in 3XSSC in concentration of 40pmol.
The 384 plates were stored at -80C untill printing day. The plates were transferred to -20C freezer in the morning for an hour and then spinned down for 20min at 1000rpm.
The Oligo arrays were produced by Virtek Arrayer System SDDC-2 on Corning GAPS II Coated Slides.
Oligos were arrayed on the slides. Each spot contains 600 pmol of 70-mer oligo.
The slides were post-processed at 80C in an oven for 2 hours for fixation of the oligos.  Following this treatment, they were soaked in Succinane anhydride, N-methyl-pyrrolidinone and 0.2M NaBorate(pH 8.0) solution in order to block the oligos.
The visualization of the printed oligos was performed by hybridizing the array with a Cy3-labeled random 9mer sequence at room temperature for the quality control of the array production.
The spots size was 110um diameter.


title: NimbleGen H. pylori 26695 Array [080407_H_pylori_26695_GC_cgh]

city: Sacramento

first: CHIU-LIEN

last: HUNG

address: 4645 2nd Ave

institute: UCDMC

organism: Helicobacter pylori 26695

description:
080407_H_pylori_26695_GC_cgh.ndf
080407_H_pylori_26695_GC_cgh.pos
designname=080407_H_pylori_26695_GC_cgh
designid=7445

manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.


title: NimbleGen Helicobacter pylori Array [2006-07-27_TI85962_60mer]

description:
design name: 2006-07-27_TI85962_60mer,
design ID: 4519

The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features.  The .ndf and .pos files are linked below as supplementary files.
native array description file: 2006-07-27_TI85962_60mer.ndf


title: NimbleGen Paramecium tetraurelia expression array SET01-02 [101018_Paramecium_LS_EXP]

status: Public on Jun 12 2015

city: Gif-sur-Yvette

first: Olivier

last: ARNAIZ

address: avenue de la terrasse

institute: CNRS

organism: Paramecium tetraurelia

manufacture_protocol: In situ oligonucleotide synthesis as described in www.nimblegen.com


title: Illumina HiSeq 2500 (Staphylococcus aureus subsp. aureus str. Newman)


title: Illumina MiSeq (Escherichia coli CFT073)

organism: Escherichia coli CFT073


title: Illumina HiSeq 2000 (Escherichia coli CFT073)


title: TIGR Haemophilus influenzae custom array

city: St Lucia

first: Sean

last: Grimmond

state: QLD

address: Research Rd

department: Genomics and Bioinformatics

country: Australia

institute: Institute of Molecular Bioscience, Uni of QLD

organism: Haemophilus influenzae

manufacture_protocol: TIGR; http://pfgrc.tigr.org


title: LC Sciences Mouse miRNA array MiRMouse_9.0_061006

city: Freiburg

first: Sebastian

last: Grundmann

address: Hugstetter Str. 55

institute: University Hospital Freiburg

organism: Mus musculus

description: miRBase 9.0

manufacture_protocol: See manufacturer's website (http://www.lcsciences.com/).


title: Illumina HiSeq 2000 (Human immunodeficiency virus 1)

organism: Human immunodeficiency virus 1


title: Agilent-017066 custom Gallus gallus array, 8x15K

city: Budapest

first: Ama

last: Szmolka

address: Hungária krt. 21.

department: Enteric Bacteriology and Foodborne Zoonoses

institute: Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences

organism: Gallus gallus

description: Agilent custom array, 8x15K. Design ID: Agilent-017066


title: Illumina HiSeq 2500 (Thermomyces lanuginosus)

status: Public on Jun 10 2015

organism: Thermomyces lanuginosus


title: Illumina HiSeq 2000 (Solanum dulcamara)

status: Public on Jun 08 2015

organism: Solanum dulcamara


title: Illumina NextSeq 500 (Camponotus floridanus)

status: Public on Jun 04 2015

organism: Camponotus floridanus


title: Illumina HiSeq 2000 (Ziziphus nummularia)

organism: Ziziphus nummularia


title: Utz Lab Whole Protein Autoantigen Array V3.0

city: Stanford

first: Jamie

last: Haddon

address: CCSR Rm 2250, 269 Campus Drive West

department: Immunology & Rheumatology

institute: Stanford University

organism:
Escherichia coli
Gallus gallus
Homo sapiens
Bos taurus
Oryctolagus cuniculus
Mus musculus

manufacture_protocol: Whole protein or synthetic peptide antigens were purchased from commercial vendors as described in the data table. Antigens were resuspended in 0.2 mg/ml in 1X phosphate-buffered saline (PBS) pH 7.4. Custom microarrays were printed with the Bio-Rad Chip Writer Pro on Whatman FAST slides, with each antigen printed in 6 replicates. Arrays were stored vacuum-packed at 4 degrees Celsius before use.


title: Ion Torrent Proton (Notophthalmus viridescens)

status: Public on Jun 03 2015

organism: Notophthalmus viridescens


title: Bacillus subtilis 168 Oligo Array [gene-level version]

city: Bethesda

first: GEO

last: admin

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

organism: Bacillus subtilis subsp. subtilis str. 168

description: 12pins spotting with Telechem 946MP3 pins

manufacture_protocol: Oligo spotted on ArrayIt Superamine slides in duplicates


title: Illumina HiSeq 1000 (Macaca mulatta)

organism: Macaca mulatta


title: [ZebGene-1_1-st] Zebrafish Gene 1.1 ST Array [transcript (gene) version]

organism: Danio rerio

description:
Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

ZebGene-1_1-st-v1.na34.zv9.transcript.csv:

#%create_date=Fri May  9 11:47:14 2014 PDT
#%chip_type=ZebGene-1_1-st-v1
#%lib_set_name=ZebGene-1_1-st
#%lib_set_version=v1
#%genome-version=zv9
#%genome-version-ucsc=zv9
#%genome-lifted-method=NONE
#%genome-lifted_from-version-ucsc=zv9
#%netaffx-annotation-date=2013-08-30
#%netaffx-annotation-netaffx-build=34


title: Illumna HumanOmniExpressExome-8 v1.2

organism: Homo sapiens

manufacture_protocol: See manufacturer's website


title: Agilent Custom Mycobacterium smegmatis Gene Expression 8X15k (AMADID: 029929)

city: Bangalore

first: Dipankar

last: Chatterji

state: Karnataka

address: Malleshwaram

department: Molecular Biphysics Unit

country: India

institute: Indian Institute of Science

organism: Mycolicibacterium smegmatis MC2 155

description: designed by Genotypic Technology Private Limited


title: TUG/IGB-hsa-29.55K

status: Public on Jun 05 2015

city: Vienna

first: Michael

last: Karbiener

address: Benatzkygasse 2-6 / G

department: Global Pathogen Safety

country: Austria

institute: Takeda

manufacture_protocol: The human oligonucleotide probe set (MWG) consisted of 29550 50-mer DNA oligonucleotides, enabling the detection of 15539 distinct RefSeq mRNAs, as well as non-RefSeq-annotated transcripts (provided by the manufacturer). Lyophilized oligonucleotides (in 384-well plates) were dissolved in 3x SSC (prepared from 20x stock consisting of 3 M NaCl and 300 mM trisodium citrate, pH 7) / 1.5 M betaine (20 µl / well) and spotted in a 4 x 12 print tip group pattern on epoxy-coated glass slides (Schott Nexterion, Peqlab #39-1064016). For fixation, slides were baked at 120°C for 1 h.


title: Explorer antibody array (ASB600)

status: Public on Jun 11 2015

city: Daejeon

first: Myung-Shin

address: Yongdu-dong, Jung-gu

department: Microbiology and Immunology

institute: Eulji University School of Medicine

manufacture_protocol: Spotted antibody array


title: AB SOLiD 4 System (Chromohalobacter salexigens DSM 3043)

last: GEO

organism: Chromohalobacter israelensis DSM 3043


title: LCSciences Human miRNA Array [Sanger mirBase Release 19.0]

city: Beijing

first: Jie

last: Li

state: HaiDian Qu

address: Taiping Road 27

department: Biochemistry and Molecular Biology

institute: Institute of Basic Medical Sciences

description: the 'full_layout.txt' contains full array layout with 5,022 rows.

manufacture_protocol: see manufacturer's webiste


title: Human p53 signaling qPCR primer Array

description: PCR assay

manufacture_protocol: see manufacturer's website


title: Rodentia miRNA Array [MRA-1032_miRRodentia_17]

city: Shanghai

first: hongxiao

last: han

address: No. 518, Ziyue Road,

department: Shanghai Veterinary Research Institute

institute: Chinese Academy of Agricultural Sciences

organism:
Cricetulus griseus
Mus musculus
Rattus norvegicus

manufacture_protocol: Microarrays designed for microRNA expression profiling and built on the flexible and powerful µParaflo® microfluidic on-chip synthesis platform. 1458 mature miRNAs based on miRBase Release 17.0 and 55 controls are arrayed on the chip. Layout File: MRA-1032_miRRodentia_17


title: Illumina HiSeq 2000 (Phanerochaete chrysosporium)

status: Public on Jun 02 2015

organism: Phanerodontia chrysosporium


title: Agilent-020806 Saccharopolyspora erythraea 8*15K array [Probe Name Version]

first: Chengheng

last: Liao

address: 130 Meilong Road

department: State Key Laboratory of Bioreactor Engineering

institute: East China University of Science and Technology

organism: Saccharopolyspora erythraea

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Illumina HiSeq 2500 (Nannochloropsis oceanica)

organism: Nannochloropsis oceanica


title: Illumina NextSeq 500 (Homo sapiens; Saccharomyces cerevisiae)

organism:
Saccharomyces cerevisiae
Homo sapiens


title: Agilent-038314 CBC Homo sapiens lncRNA + mRNA microarray V2.0 (Probe Name version)

state: MD

description: *** The ID column includes the Agilent Probe Names. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL18109.


title: Illumina HiSeq 2000 (Homo sapiens; Human poliovirus 1 strain Sabin)

status: Public on Jun 01 2015

organism:
Homo sapiens
Human poliovirus 1 strain Sabin


title: Agilent-023137 Arabidopsis_TAIR8

city: Dublin

first: Pat

last: Ryan

address: College Green

country: Ireland

institute: TCD

organism: Arabidopsis thaliana

description:
Arrays of this design have barcodes that begin with 16023137 or 2523137.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-030949 custom 4x180K Orchid Gene Expression Array

city: Taipei

first: Ming Che

last: Shih

address: No.128, Sec. 2, Academia Rd., Nangang Dist

department: Agricultural Biotechnology Research Center

institute: Academia Sinica, Taiwan

organism: Phalaenopsis aphrodite

description: cDNA sequences were collected from Orchidstra database (http://orchidstra.abrc.sinica.edu.tw/). 43662 genes were presented and 67038 probes were designed on this chip.


title: In house printed microRNAExiqon LNA probes microarray

city: Maastricht

first: Kasper

last: Derks

state: Limburg

address: P. Debyelaan 25

department: Clinical Genetics

country: Netherlands

institute: Maastricht University Medical Center

organism:
Homo sapiens
Mus musculus
Rattus norvegicus

manufacturer: Center for Biomics, Erasmus MC, CA Rotterdam

manufacture_protocol: The LNA-based capture probeset (Exiqon version 10,) was spotted on Nexterion E slides using a Virtek Chipwriter Pro


title: TUG/IGB-hsa-29.55K-old

description: There are 206 Arabidopsis control oligonucleotides with very similar names that are differentiated by the letter case. For example, 1ara_a48#2 and 1Ara_a48#2. In order to distinguish these two probes in the platform table, "_a" has been added to the lower case name and "_b" has been added to the upper case name.


title: Agilent-025238 human 4x44k microarray, customized for lncRNAs

city: Detroit

middle: J

last: Bannon

state: MI

address: 540 E Canfield

department: Pharmacology

country: USA

institute: Wayne State University School of Medicine

description: Microarray designed to analyze human large non coding RNA. Seven 60-mer probes per lncRNA gene.

manufacture_protocol: See manufacturer's website (www.agilent.com).


title: 100428_GG_Bderm_SLH14081_expr

city: Madison

first: Gregory

last: Gauthier

state: WI

address: 1550 Linden Drive

department: Medicine

institute: University of Wisconsin - Madison

organism: Blastomyces gilchristii SLH14081

description: 385K whole genome gene expression microarrays (Roche NimbleGen, Inc., Madison, WI) were custom designed for B. dermatitidis using the annotated sequence of strain SLH14081 (9,587 genes; www.broadinstitute.org). At the time these arrays were designed, SLH14081 was the only sequenced and annotated genome avaiable for Blastomyces dermatitidis. A total of 9,583 genes (nuclear and mitochondrial) were represented on each array in quadruplicate with 9,571 genes having a probe-set comprised of 10 unique oligonucleotide probes; 12 genes had less than 10 unique oligonucleotide probes.  Oligonucleotide probes with sufficient specificity were unable to be designed for a mitochondrial laglidadg endonuclease (BDBG_17014), mitochondrial ATP synthase F0 subunit 8 (BDBG_17017), mitochondrial NADH dehydrogenase subunit 5 (BDBG_17032), and a predicted protein (BDBG_03106).  Empty features on the array were filled with randomly generated probes with similar length and G+C content as the NimbleGen internal controls.

manufacture_protocol: 385K whole genome gene expression design for Blastomyces dermatititidis SLH14081 (including mitochondrion, sequence from Broad Institute, plus 3 probes from customer supplied lamba sequence). 9587 initial CDS seequences, 9583 with probles, 10 probe per sequence except for 12 seqs with fewer, position_weight=50; 4 copies of each probe on the array, empty features filled with randomly generated probes of comparable length and G+C content to act as controls for nonspecific binding.  Arrays were prepared using Maskless Array Synthesizer (MAS) technology


title: miRXplore_v4.0 TM Microarray

city: Petach Tikva

first: Smadar

last: Avigad

address: 14 Kaplan Street

department: Pediatric Hematology Oncology

country: Israel

institute: Schneider Children's Medical Center of Israel

manufacturer: Miltenyi Biotec GmbH, Bergisch Gladbach, Germany

manufacture_protocol: see http://www.miltenyibiotec.com


title: Agilent-032494 Karray G47S_V2

city: Pittsburgh

first: Svetlana

middle: A

last: Yatsenko

state: PA

address: 300 Halket St

institute: University of Pittsburgh

description:
Arrays of this design have barcodes that begin with 16032494 or 2532494.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-017566 Yeast Microarray (Feature Number version)

city: Princeton

first: Megan

middle: Nicole

last: McClean

state: New Jersey

address: 120 Carl Ican

department: Lewis-Sigler Institute

institute: Princeton University

organism: Saccharomyces cerevisiae

description:
Feature number version of GPL11382
Agilent Design ID 017566.

manufacture_protocol: See manufacturer's web site at http://www.agilent.com/ .


title: Agilent-032465 Karray G25_v2

description:
Arrays of this design have barcodes that begin with 16032465 or 2532465.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Illumina HiSeq 2500 (Macaca fascicularis)

status: Public on Jun 09 2015

organism: Macaca fascicularis


title: Agilent-032611 Shirasu-JK001 [Probe Name Version]

status: Public on May 30 2015

city: Yokohama

first: Juliane

middle: Karine

last: Ishida

state: Kanagawa

address: 1-7-22 Suehiro-cho, Tsurumi-ku

department: CSRS

country: Japan

institute: RIKEN

organism: Phtheirospermum japonicum

description: The sequences used to design the probes for this array came from an RNA-Seq study of Phtheirospermum japonicum. The sample used for RNA-Seq is accessioned in NCBI's BioSample database: SAMN03271814.


title: Custom Human Extracellular Matrix and Adhesion Molecules PCR Array

status: Public on May 08 2015

city: Kumamoto

first: Hideo

last: Kudo

address: Chuo-ku, Honjo, 1-1-1

department: Dermatology

institute: Kumamoto University

description: customized version of Qiagen's Human Extracellular Matrix and Adhesion Molecules PCR Array.


title: [HuGene-1_1-st] Affymetrix Human Gene 1.1 ST Array [HuGene11stv1_Hs_ENSG version 18.0.0]

status: Public on May 21 2015

last: admin

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

description:
Probe set data extracted from custom CDF (HuGene11stv1_Hs_ENSG.cdf v18.0.0).
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/18.0.0/ensg.asp

manufacture_protocol: See manufacturer's web site


title: Illumina HiSeq 2000 (Zea mays subsp. mays)

status: Public on Nov 12 2013

organism: Zea mays subsp. mays


title: PacBio RS II (Escherichia coli CFT073)

organism: Escherichia coli CFT073


title: NimbleGen Haemophilus influenzae supragenome 72K array v1.0 [090514_H_influenza_ASRI_RE_expr]

status: Public on Oct 19 2012

city: Philadelphia

first: Benjamin

last: Janto

department: Microbiology & Immunology

institute: Drexel University College of Medicine

organism: Haemophilus influenzae

description:
NimbleGen design name: 090514_H_influenza_ASRI_RE_expr
NimbleGen Design ID: 9974
Native array description file: 090514_H_influenza_ASRI_RE_expr.ndf
Since there is no annotation, there is no NGD file.
An expression design for 2,890 clusters / 4,052 subclusters from all genes identified in 24 strains of Haemophilus influenzae. ~3 60-mer probe pairs (PM/MM) per core subcluster and ~13 60-mer probe pairs (PM/MM) per distributed subcluster. Each probe is replicated twice. The design includes random GC and other non-Haemophilus influenzae (Streptococcus pneumoniae) negative control probes.

manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.


title: Illumina HiSeq 2500 (Chlamydomonas reinhardtii)

status: Public on Mar 27 2014

organism: Chlamydomonas reinhardtii


title: Bacillus subtilis 168 Oligo Array

status: Public on Oct 05 2007

city: Haren

first: Siger

last: Holsappel

state: Groningen

address: Kerklaan 30

department: Molecular Genetics

institute: Rijksuniversiteit Groningen

organism: Bacillus subtilis

description:
12pins spotting with Telechem 946MP3  pins
spotsize 90-100 um

first: S.

last: Kuipers

relation:
Alternative to: GPL15025
Alternative to: GPL20288


title: Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray (miRBase release 16.0 miRNA ID version)

status: Public on Mar 12 2013

city: Palo Alto

last: Agilent Technologies

institute: Agilent Technologies

organism: Homo sapiens

description:
Feature Number version of this Array is GPL15018

Human and human viral miRNAs

Arrays of this design have barcodes that begin with 16031181 or 2531181.

Grid Date: 16-Nov-2010 (corresponding to miRBase release 16.0)

relation: Alternative to: GPL15018 (Feature Number version)

relation: Alternative to: GPL15159 (Probe Name version)