title: SABiosciences Mouse Inflammatory Cytokines & Receptors PCR array (PAMM-011Z)

status: Public on Jul 06 2018

city: Galveston

first: Istvan

last: Boldogh

state: Texas

address: 301 UNIVERSITY BLVD.

department: Microbiology & Immunology

country: USA

institute: UNIVERSITY OF TEXAS MEDICAL BRANCH

organism: Mus musculus

technology: RT-PCR

distribution: virtual

manufacture_protocol: see manufacturer's website


title: Illumina HiSeq 2500 (Pyrus x bretschneideri)

status: Public on Nov 30 2017

last: GEO

organism: Pyrus x bretschneideri

technology: high-throughput sequencing


title: Illumina MouseWG-6 v2.0 [Asuragen company, Probe ID version]

status: Public on Dec 17 2018

city: Philadelphia

first: Ettickan

last: Boopathi

state: Pennsylvania

address: 1020 Locust Street

department: Medicine

institute: THOMAS Jefferson University

technology: oligonucleotide beads

distribution: custom-commercial


title: [Axiom_550458] Affymetrix Axiom Human Custom Genotyping Array

city: Gainesville

first: Christopher

middle: Jordan

last: Clukay

state: Florida

department: Anthropology

institute: University of Florida

organism: Homo sapiens

technology: in situ oligonucleotide

description:
#%create_date=2012-12-18 GMT-08:00 12:11:10
#%chip_type=Axiom_550458
#%genome-species=Homo sapiens
#%genome-version=hg19
#%genome-version-ucsc=hg19
#%genome-version-ncbi=37
#%genome-version-create_date=2009-02-00
#%mitochondrion-version=NC_001807
#%dbSNP-date=2012-06-26
#%dbSNP-version=137
#%hapmap-date=2008-01-08
#%hapmap-version=23
#%allele_frequency_data_reference=1KGp1_mar2012
#%netaffx-annotation-date=2012-11-05
#%netaffx-annotation-netaffx-build=33
#%netaffx-annotation-tabular-format-version=1.3

manufacture_protocol: see manufacturer's web site


title: Agilent-020573 Bifidobacterium breve UCC2003 array (Feature Number version)

status: Public on Mar 14 2018

city: Cork

first: Mary

last: O'Connell Motherway

address: Western Road

department: Department of Microbiology and Alimentary Pharmabiotic Centre

country: Ireland

institute: University College Cork

organism: Bifidobacterium breve UCC2003

manufacture_protocol: See manufacturer's website (www.agilent.com).


title: Illumina MiSeq (Chromochloris zofingiensis)

status: Public on Nov 27 2017

organism: Chromochloris zofingiensis


title: 454 GS (Actinobacillus pleuropneumoniae)

organism: Actinobacillus pleuropneumoniae


title: Illumina MiSeq (Chlorella sorokiniana)

organism: Chlorella sorokiniana


title: BMFZ-GTL_Mmu_40K_v3

city: Duesseldorf

first: Karl

last: Koehrer

address: Universitaetsstr. 1

department: BMFZ

country: Germany

institute: University of Duesseldorf

technology: spotted oligonucleotide

distribution: non-commercial

manufacturer: BMFZ-GTL, Heinrich-Heine University Duesseldorf

manufacture_protocol: Oligos were purchased from Operon (AROS Mus Musculus V.4.0, plates 1-95 + control plate and buffer plate) arrayed in Genetix V-bottom 384-well plates. Each well contained 300 pmol of 70-mer oligo. A day before printing oligos were resuspended in 15 µl Amino-Spotting-Buffer (Genetix Ltd., Hampshire, UK). Plates were centrifuged at 1000 rpm for 5 minutes, sealed and stored at 8°C over night. Before spotting, plates were centrifuged at 1000 rpm for 5 minutes one more time. Seals were removed, plates covered with plate lids and placed in appropriate location of the plate cassette. Oligonucleotides were spotted to aminosilane coated UltraGap microarray slides (Corning Inc., NY, USA) using a QArray2 microarray spotter (Genetix Ltd., Hampshire, UK). After completion of the print run, plates were dried through passive evaporation in a protected environment.


title: Agilent-079362 Klebsiella pneumoniae Gene Expression 8x15k Array AMADID: 079362 by Genotypic Technology Private Limited

status: Public on Nov 28 2017

city: Bangalore

first: Genotypic

last: technology

state: Karnataka

address: 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE

country: India

institute: Genotypic Technology

organism: Klebsiella pneumoniae


title: 454 GS FLX (Fusarium fujikuroi)

status: Public on Nov 26 2017

organism: Fusarium fujikuroi


title: 454 GS FLX (Fusarium oxysporum f. sp. lycopersici)

organism: Fusarium oxysporum f. sp. lycopersici


title: Illumina HiSeq 2000 (Bolitoglossa vallecula)

status: Public on Nov 21 2017

organism: Bolitoglossa vallecula


title: Illumina HiSeq 2000 (Acremonium chrysogenum)

organism: Hapsidospora chrysogena


title: CustomArray Signaling Pathway platform version 3

status: Public on Nov 22 2017

city: Moscow

first: Maria

middle: Vladimirovna

last: Suntsova

address: Miklukho-Maklaya, 16/10

department: Department of Genetics and Postgenomic Technologies

country: Russia

institute: M.M. Shemyakin and Yu.A. Ovchinnikov  Institute of  bioorganic chemistry of the Russian Academy of Sciences

technology: spotted DNA/cDNA

manufacture_protocol: CustomArray B3 synthesizer was used for oligonucleotide probe synthesis on CustomArray ECD 4X2K/12K slides. Synthesis was performed according to manufacturer recommendations. Two replicates of total 6000 unique oligonucleotide probes of 40 nucleotides in length were placed on chip.


title: Agilent-059169 Shigella flexneri 4X44k array

city: Shanghai

first: ai

middle: ping

last: jiang

address: No.151, Libing Rd., Zhangjiang Hi-tech Park, Pudong

country: China

institute: Shanghai Biotechnology Corporation

organism: Shigella flexneri

description:
Arrays of this design have barcodes that begin with 16059169 or 2559169.
Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software."
The ID column represents the Agilent Feature Extraction feature number.
Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface)."
To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions."

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Agilent-059169 Shigella flexneri 4X44k array (Probe name version)

city: shanghai

first: Zhiwei

last: Lin

state: shanghai

address: dongan road 131 , xuhui district, Shanghai

institute: School of Basic Medical Science and Institutes of Biomedical Sciences, Shanghai Medical College of Fudan University

description: Alternative version of GPL24287


title: Illumina HiSeq 4000 (Gadus morhua)

status: Public on Nov 16 2017

organism: Gadus morhua


title: Illumina HiSeq 4000 (Alteromonas macleodii)

status: Public on Nov 24 2017

organism: Alteromonas macleodii


title: Illumina MiSeq (Lactobacillus rhamnosus GG)

status: Public on Nov 25 2017

organism: Lacticaseibacillus rhamnosus GG


title: Illumina NextSeq 500 (Photinus pyralis)

status: Public on Nov 20 2017

organism: Photinus pyralis


title: Illumina HiSeq 4000 (Daphnia magna)

organism: Daphnia magna


title: Illumina HiSeq 2000 (Sulfolobus acidocaldarius)

status: Public on Nov 17 2017

organism: Sulfolobus acidocaldarius


title: Illumina HiSeq 2000 (Neospora caninum)

status: Public on Nov 19 2017

organism: Neospora caninum


title: Illumina HiSeq 2500 (Loxodonta africana)

organism: Loxodonta africana


title: Illumina NextSeq 500 (Zymomonas mobilis)

organism: Zymomonas mobilis


title: Agilent-031125 Desulfitobacterium hafniense oligonucleotide microarray 8x60k

city: Wageningen

first: Ye

last: Tian

address: Stippeneng 4

department: AFSG

country: Netherlands

institute: Wageningen University

organism: Desulfitobacterium hafniense

description: A custom-designed based on the complete genome sequences of D. hafniense DCB-2 and Y51 (NCBI Genbank accession numbers NC_007907 and NC_011830, respectively). The array contains 21905 distinct 45 to-60 oligonucleotides designed with PICKY (Chou et al., 2004; Chou et al., 2009), including two or three probes per target transcript, as well as sense and antisense probes targeting intergenic regions that were larger than 60 oligonucleotides. In total, 11652 probes targeting genes and intergenic regions shared by both genomes. Probes were printed in duplicate on the Agilent 8 x 60 K custom gene expression microarray platform, containing in addition 1319 Agilent control probes.

manufacture_protocol: Array was designed by using Agilent eArray software. Custom gene expression arrays were generated by Agilent Technologies in 8X60K format. See manufacturer's web site at http://www.agilent.com/.


title: Illumina HiSeq 2500 (Penicillium steckii)

organism: Penicillium steckii


title: Illumina HiSeq 2000 (Aspergillus flavus)

organism: Aspergillus flavus


title: [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [Brainarray, hta20_Hs_ENTREZG_21]

city: Bethesda

first: GEO

last: admin

state: MD

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

organism: Homo sapiens

manufacture_protocol: HTA-2_0 chip; annotations cased on custom cdf: hta20_Hs_ENTREZG_21


title: Illumina HiSeq 2500 (Penicillium flavigenum)

organism: Penicillium flavigenum


title: Illumina HiSeq 2500 (Penicillium nalgiovense)

organism: Penicillium nalgiovense


title: Illumina HiSeq 2500 (Penicillium decumbens)

organism: Penicillium decumbens


title: Illumina HiSeq 2500 (Penicillium polonicum)

organism: Penicillium polonicum


title: Illumina HiSeq 2000 (Xiphophorus maculatus)

organism: Xiphophorus maculatus


title: Illumina HiSeq 2500 (Penicillium coprophilum)

organism: Penicillium coprophilum


title: Illumina HiSeq 4000 (Ictidomys tridecemlineatus)

status: Public on Nov 15 2017

organism: Ictidomys tridecemlineatus


title: Illumina HiSeq 2500 (Melampsora larici-populina)

status: Public on Nov 14 2017

organism: Melampsora laricis-populina


title: Illumina HiSeq 2500 (Ogataea parapolymorpha)

organism: Ogataea parapolymorpha


title: Illumina HiSeq 2500 (Microlunatus phosphovorus)

organism: Microlunatus phosphovorus


title: Illumina HiSeq 2000 (Homo sapiens; Human betaherpesvirus 5)

status: Public on Nov 10 2017

organism:
Homo sapiens
Human betaherpesvirus 5


title: Agilent-055750 Mus musculus custom microarray

city: Milwaukee

first: Xiaowen

last: Bai

state: WI

address: 8701 Watertown Plank Road

department: Anesthesiology

institute: Medical College of Wisconsin

organism: Mus musculus

manufacture_protocol: see manufacturer's web site at http://www.agilent.com


title: Illumina HiSeq 2500 (Syzygium longifolium)

status: Public on Nov 09 2017

organism: Syzygium longifolium


title: Illumina HiSeq 4000 (Macaca mulatta polyomavirus 1)

status: Public on Nov 08 2017

organism: Betapolyomavirus macacae


title: Ion Torrent Proton (Chlamydia trachomatis)

organism: Chlamydia trachomatis


title: miRCURY LNA microRNA Array, 6th generation - miRBase 16.0

city: Belfast

first: Guillermo

last: López-Campos

state: Northern Ireland

address: 97 Lisburn road

department: Centre for Experimental Medicine

country: United Kingdom

institute: Queen's University of Belfast

organism:
Homo sapiens
Mus musculus
Rattus norvegicus

manufacture_protocol: see Exiqon site


title: Illumina Nextseq 500 (Homo sapiens)

organism: Homo sapiens


title: Agilent-082312 Fusarium fujikuroi

status: Public on Nov 13 2017

city: Freising

first: Ulrich

last: Guldener

state: Bavaria

address: Maximus-von-Imhof-Forum 3

department: Chair of genome-oriented bioinformatics

institute: Technische Universität München

organism: Fusarium fujikuroi


title: Illumina HiSeq 2500 (Arillastrum gummiferum)

organism: Arillastrum gummiferum


title: HiSeq X Ten (Tannerella forsythia)

status: Public on Nov 07 2017

organism: Tannerella forsythia


title: Illumina HiSeq 2500 (Tristaniopsis glauca)

organism: Tristaniopsis glauca


title: Agilent-079361 Acinetobacter baumannii Gene Expression 8x15k Array

organism: Acinetobacter baumannii

description:
Designed by Genotypic Technology Private Limited.
AMADID: 079361


title: Ion Torrent Proton (Listeria monocytogenes EGD-e)

organism: Listeria monocytogenes EGD-e


title: Illumina HiSeq 4000 (Oreolalax rhodostigmatus)

organism: Oreolalax rhodostigmatus


title: LC_MRA-2001-UGD101203

city: Houston

first: Kyle

middle: Ryan

last: Navel

address: 2575 W. Bellfort Ave. Ste 270

department: Sales

institute: LC Sciences

organism:
Caenorhabditis elegans
Haemonchus contortus

manufacture_protocol: custom miRNA microarray with 100% coverage of mature c. elegans miRNAs listed in miRBase version 16 plus additional custom sequences provided by the customer. Arrays are made based µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://miRBase.org) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. The detection probes are made by in situ synthesis using PGR (photogenerated reagent) chemistry.


title: Agilent-048242 Salmonella_Enterica_str14028S [Probe Name Version]

city: singapore

first: smarajit

last: chakraborty

address: T-Lab, 5A Engineering Drive 1, NUS

country: Singapore

institute: Mechanobiology Institute

description:
NC_016856 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S All Genes

Arrays of this design have barcodes that begin with 16048242 or 2548242.


title: Illumina MiSeq (Venezuelan equine encephalitis virus)

organism: Venezuelan equine encephalitis virus


title: Agilent-065755 EatonDrosophila2 065600

city: Stony Brook

first: Jorge

last: Azpurua

state: New York

address: 100 Nicolls Rd

institute: Stony Brook University

organism: Drosophila melanogaster

description:
AdditionalProbes added

Arrays of this design have barcodes that begin with 16065755 or 2565755.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Illumina HiSeq 2500 (Tupaia belangeri)

status: Public on Nov 06 2017

last: GEO

organism: Tupaia belangeri


title: Illumina HiSeq 3000 (Oncorhynchus mykiss)

organism: Oncorhynchus mykiss


title: Hiller Streptococcus pneumoniae SpSGH array

city: Pittsburgh

first: Anagha

last: Kadam

address: 4400 Fifth Avenue, Mellon Institute, Room 217

department: Biological Sciences

institute: Carnegie Mellon University

organism: Streptococcus pneumoniae

manufacture_protocol: NimbleGen 12x135k


title: Illumina HiSeq 2000 (Macaca mulatta polyomavirus 1)

organism: Betapolyomavirus macacae


title: Illumina NextSeq 500 (Zika virus)

status: Public on Nov 03 2017

organism: Zika virus


title: Illumina NextSeq 500 (Dengue virus 4)

organism: dengue virus type 4


title: Agilent-037557 C. albicans 12K (111122 Georgetown David on C Albicans) [ORF version]

status: Public on Nov 04 2017

city: Washington

first: Dongmei

last: Li

state: DC

address: 3900 Reservoir Rd Med dent SE318

department: Microbiology

organism: Candida albicans

relation: Alternative to: GPL18166 (Feature Number Version)


title: NanoString nCounter human miRNA expression system

city: Columbus

first: Michael

last: Caligiuri

state: OH

address: 460 W 10th Ave

institute: The Ohio State University

organism: Homo sapiens

technology: other

manufacture_protocol: See manufacturer's website http://www.nanostring.com


title: Illumina NextSeq 500 (Dengue virus 3)

organism: dengue virus type 3


title: Illumina NextSeq 500 (Dengue virus 2)

organism: dengue virus type 2


title: Illumina NextSeq 500 (Dengue virus 1)

organism: dengue virus type 1


title: Illumina HiSeq 2000 (Trichosporon asahii var. asahii CBS 8904)

status: Public on Nov 02 2017


title: Illumina HiSeq 2000 (Trichosporon asahii var. asahii CBS 2479)


title: Illumina HiSeq 1000 (Staphylococcus aureus)

organism: Staphylococcus aureus


title: State Key Laboratory Human microRNA array 1858

status: Public on Nov 01 2017

city: Guangzhou

first: Nuoqing

last: Weng

state: Guangdong

address: 651，Dongfengdong road

institute: State Key Laboratory of Oncology in South China,Sun Yat-sen University

manufacture_protocol: 1858 microRNA probes were printed onto slides using the SmartArrayerTM 136 printer (CapitalBio,Inc.,Beijing,China)


title: Illumina HiSeq 4000 (Oryzias latipes)

organism: Oryzias latipes


title: Mouse Inflammasomes RT² Profiler PCR Array

city: Madrid

first: Sara

last: Pulido

address: Arturo Duperier, 4.

department: Department of Endocrine and Nervous Systems Pathophysiology

country: Spain

institute: Alberto Sols Biomedical Research Institute (Spanish National Research Council - Autonomous University of Madrid)

organism: Mus musculus

description:
DC-APC PCR assay panel
SABiosciences RT² Profiler panel of PCR assays.


title: [MoGene-1_1-st] Affymetrix Mouse Gene 1.1 ST Array [transcript-level na35ens81]

city: Chapel Hill

first: Claire

middle: M.

last: Doerschuk

state: NC

address: Marsico Hall 7205 CB#7248

department: Marsico Lung Institute

institute: University of North Carolina at Chapel Hill

description:
netAffx build = 35
Ensembl reference = 81
genome version = mm10

distribution: commercial


title: BGISEQ-500 (Penicillium oxalicum)

organism: Penicillium oxalicum


title: AMADID: 71420 Dog Methylation Array

city: Legnaro (PD)

first: Serena

last: Ferraresso

state: Padova

address: Viale dell'Università

department: Dept of Comparative Biomedicine and Food Science

country: Italy

institute: University of Padova

organism: Canis lupus familiaris

manufacture_protocol: See SurePrint Technology at manufacturer's web site http://agilent.com/


title: NimbleGen Zobellia galactanivorans DsijT 4*72k_array

city: Roscoff

first: Francois

last: Thomas

address: Place George Teissier

department: UMR8227, CNRS-UPMC

country: France

institute: Station Biologique de Roscoff

organism: Zobellia galactanivorans

description:
The whole genome of Z. galactanivorans (4482 CDS + 2595 intergenic regions) was covered by 72,000 oligonucleotides with a 60-bp average size. In total, the pangenomic microarray comprised 52,389 and 19,345 probes targeting genic and intergenic regions, respectively. It was impossible to design probes for 256 coding regions and 1,556 non-coding regions, either because sequences were too similar to ensure specificity or the target regions were too short. Overall, the microarray covers 95% of the genes of Z. galactanivorans, with 11.6 probes per gene on average.
The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features.  The .ndf, .pos and .ncd files are linked below as supplementary files.

manufacture_protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.


title: Illumina HiSeq 4000 (Branchiostoma lanceolatum)

organism: Branchiostoma lanceolatum


title: HiSeq X Ten (Bos taurus)

status: Public on Nov 05 2017

organism: Bos taurus


title: [RaGene-1_1-st] Affymetrix Rat Gene 1.1 ST Array [transcript (gene) version] [CDF: ragene11st_Rn_ENTREZG_19.0.0]

city: Groningen

first: Marijke

last: Faas

address: Hanzeplein 1

institute: University Medical Center Groningen

organism: Rattus norvegicus

relation: Alternative to: GPL11534 (alternative CDF [official])

manufacture_protocol: This is identical to GPL11534 but a custom CDF environment was used to extract data [ragene11st_Rn_ENTREZG_19.0.0]. CDF and other files can be downloaded at: http://mbni.org/customcdf/19.0.0/entrezg.download/ragene11st_Rn_ENTREZG_19.0.0.zip


title: Agilent-068043 Custom Whole Genome Escherichia coli 8x15K designed by Genotypic Technology Private Limited

city: Bangalore

first: Genotypic

last: technology

address: 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE

institute: Genotypic Technology

organism: Escherichia coli


title: Illumina MiSeq (synthetic gene)

status: Public on Jun 05 2017

organism: synthetic gene


title: Custom Nimblegen Nitrosopumilus maritimus SCM1 Array (090209_N_maritimus_SCM1_expr)

city: Seattle

first: Serdar

last: Turkarslan

state: WA

address: 401 Terry Ave

institute: Institute for Systems Biology

organism: Nitrosopumilus maritimus SCM1

description: NimbleGen custom design 090209_N_maritimus_SCM1_expr_X4; 4x72K probes; design ID 9157; 4-plex expression for Nitrosopumilus maritimus SCM1 (genome.ornl.gov/microbial/nmar/02jul07), 1799 gene models, 12mer freq filtering, 13 probes each per 1794 target seqs), three copies of each on array.


title: Agilent-037557 C. albicans 12K (111122 Georgetown David on C Albicans)

status: Public on Jan 15 2014

organism: Candida albicans

description:
Georgetown David

Arrays of this design have barcodes that begin with 16037557 or 2537557.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Illumina HiSeq 2500 (Paraburkholderia phymatum STM815)

status: Public on Dec 01 2016

organism: Paraburkholderia phymatum STM815


title: [EleGene-1_0-st] Affymetrix C. elegans Gene 1.0 ST Array [transcript (gene) version]

status: Public on Sep 25 2014

city: Santa Clara

last: Affymetrix

state: CA

institute: Affymetrix, Inc.

organism: Caenorhabditis elegans

description:
Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

#EleGene-1_0-st-v1.na34.ce6.transcript.csv
#%create_date=Tue May  6 17:48:56 2014 PDT
#%chip_type=EleGene-1_0-st-v1
#%lib_set_name=EleGene-1_0-st
#%lib_set_version=v1
#%genome-species=Caenorhabditis elegans
#%genome-version=ce6
#%genome-version-ucsc=ce6
#%genome-version-create_date=2008-05-00
#%genome-lifted-method=NONE
#%genome-lifted_from-species=Caenorhabditis elegans
#%genome-lifted_from-version-ucsc=ce6
#%netaffx-annotation-date=2013-08-30
#%netaffx-annotation-netaffx-build=34

manufacture_protocol: See manufacturer's web site


title: Illumina HiSeq 2500 (Columba livia)

status: Public on Nov 04 2016

organism: Columba livia


title: Arraystar Rat LncRNA microarray (026403)

status: Public on Jun 16 2012

city: Rockville

first: Panos

last: Pan

address: 9430 Key West Avenue

institute: Arraystar Inc.


title: NextSeq 550 (Arabidopsis thaliana)

status: Public on Nov 15 2017

organism: Arabidopsis thaliana


title: Agilent-019921 Sheep Gene expression microarray 8x15K, G4813A (Probe Name version)

status: Public on Aug 03 2011

city: Gainesville

first: Maria

middle: Belen

last: Rabaglino

state: FL

address: 326 University Village Apt 6

institute: University of Florida

organism: Ovis aries

description:
Product Number: G4813A
Design ID: 019921
Arrays/Slide: 8 microarrays/slide
Format: 8 x 15K (One glass slide formatted with eight high-definition 15K arrays)
Sequences: 15,208 sheep probes represented (15,008 unique probe sequences)

The annotation in the Platform data table was updated on November 23, 2017.
The previous annotation is available in the supplementary file.

manufacture_protocol: Agilent 60-mer SurePrint technology.  See manufacturer's website www.agilent.com.


title: Illumina HiSeq 3000 (Saccharomyces cerevisiae)

status: Public on Jan 31 2017

organism: Saccharomyces cerevisiae


title: NimbleGen Homo sapiens HG18 expression array [100718_HG18_opt_expr_HX12] SEQ_ID condensed version

status: Public on Mar 21 2014

city: Bethesda

first: GEO

last: admin

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

organism: Homo sapiens

description: designname: 100718_HG18_opt_expr_HX12


title: Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version)

status: Public on Nov 12 2010

city: Palo Alto

last: Agilent Technologies

institute: Agilent Technologies

organism: Mus musculus

description: *** The ID column includes the Agilent Probe Names. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL10333.


title: Illumina Genome Analyzer II (Danio rerio)

status: Public on Sep 29 2009

last: GEO

organism: Danio rerio


title: Ion Torrent PGM (Mus musculus)

status: Public on Nov 27 2012


title: Illumina MouseWG-6 v2.0 R2 expression beadchip

status: Public on Aug 07 2013

description:
The MouseWG-6 v2.0 Expression BeadChip offer the most up-to-date content for whole-genome expression profiling in the mouse. Featuring content derived from the National Center for Biotechnology Information Reference Sequence (NCBI RefSeq) database (Build 36, Release 22).
Please use the GEO Data Submission Report Plug-in v1.0 for Gene Expression which may be downloaded from https://icom.illumina.com/icom/software.ilmn?id=234 to format the normalized and raw data. These should be submitted as part of a GEOarchive. Instructions for assembling a GEOarchive may be found at http://www.ncbi.nlm.nih.gov/projects/geo/info/spreadsheet.html

relation: Alternative to: GPL22165 (gene symbol version)

manufacture_protocol: see manufacturer's website


title: Illumina Genome Analyzer II (Caenorhabditis elegans)

status: Public on Sep 22 2009


title: Illumina Genome Analyzer (Caenorhabditis elegans)

status: Public on Sep 28 2009


title: Ion Torrent PGM (Homo sapiens)

status: Public on Jun 17 2013