title: Illumina Genome Analyzer IIx (Sardinops sagax)

status: Public on Apr 27 2018

last: GEO

country: USA

organism: Sardinops sagax

technology: high-throughput sequencing

distribution: virtual


title: Illumina HiSeq 2000 (Influenza A virus)

status: Public on Apr 30 2018

organism: Influenza A virus


title: Illumina MiSeq (Sulfolobus acidocaldarius)

status: Public on Apr 26 2018

organism: Sulfolobus acidocaldarius


title: Illumina MiSeq (Influenza B virus)

organism: Influenza B virus


title: HiSeq X Ten (Ciona savignyi)

organism: Ciona savignyi


title: Illumina HiSeq 2000 (Mucor circinelloides)

organism: Mucor circinelloides


title: Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (re-annotated according to transcripts in Ensembl 74)

status: Public on Jan 06 2019

city: Padova

first: Gerolamo

last: Lanfranchi

address: Via U. Bassi, 58/B

department: CRIBI - Biotechnology Center and Biology Department

country: Italy

institute: University of Padova

organism: Mus musculus

technology: in situ oligonucleotide

distribution: custom-commercial

manufacture_protocol: Sure print G3 technology was used to sinthesize each probe according to Agilent technology


title: Illumina Genome Analyzer IIx (Scomber japonicus)

organism: Scomber japonicus


title: Illumina MiSeq (Influenza A virus)


title: Illumina HiScanSQ (Solanum lycopersicum)

organism: Solanum lycopersicum


title: MRA-1001B1 Human miRNA Array [miRHuman_19]

status: Public on Apr 25 2018

city: Wuhan

first: Yu

last: Wang

state: Hubei

address: 1095 Jiefang Dadao

country: China

institute: Institute of Pathology

organism: Homo sapiens

manufacture_protocol: see manufacturer's website


title: Illumina MiSeq (Larimichthys crocea)

organism: Larimichthys crocea


title: AB 5500 Genetic Analyzer (Gallus gallus)

organism: Gallus gallus


title: BGISEQ-500 (Macaca mulatta)

organism: Macaca mulatta


title: Illumina HiSeq 4000 (Marmota flaviventris)

organism: Marmota flaviventris


title: Agilent-054950 SurePrint G3 Custom Cowpea CGH Microarray (Feature Number version)

city: Hangzhou

first: Pei

last: Xu

address: 198 Shiqiao Rd

department: Vegetable Institute

institute: Zhejiang Academy of Agricultural Sciences

organism: Vigna unguiculata

manufacture_protocol: Agilent SurePrint G3 Custom Microarray representing 29,728 unigenes from the cowpea unigene assembly P12.


title: Illumina HiSeq 2000 (Xiphophorus maculatus x Xiphophorus hellerii)

status: Public on Apr 24 2018


title: Illumina HiSeq 4000 (Nilaparvata lugens)

status: Public on Apr 23 2018

organism: Nilaparvata lugens


title: Illumina HiSeq 2500 (Nilaparvata lugens)


title: Illumina HiSeq 2000 (Vibrio harveyi)

organism: Vibrio harveyi


title: Illumina HiSeq 2500 (Plasmodium falciparum 3D7)

organism: Plasmodium falciparum 3D7


title: Agilent-066423 ‘048306On1M’ (Probe Name Version)

city: Hannover

first: Oliver

last: Dittrich-Breiholz

address: Carl-Neuberg-Str. 1

department: Research Core Unit Genomics

country: Germany

institute: Medical School Hannover

description: This Microarray represents a refined version of the Whole Mouse Genome Oligo Microarray 4x44K v2 (Design ID 026655, Agilent Technologies), called ‘048306On1M’ (Design ID 066423) developed by the Research Core Unit Genomics (RCUG) of the Hannover Medical School. Microarray design was created at Agilent’s eArray portal using a 1x1M design format for mRNA expression as template. All non-control probes of design ID 026655 have been selected to be printed four times within a region comprising a total of 181560 Features (170 columns x 1068 rows). Four of such regions were placed within one 1M region giving rise to four microarray fields per slide to be hybridized individually (Customer Specified Feature Layout). Control probes required for proper Feature Extraction software operation were determined and placed automatically by eArray using recommended default settings.

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Illumina NextSeq 500 (Pyrus communis)

organism: Pyrus communis


title: Illumina HiSeq 2500 (feces metagenome)

organism: feces metagenome


title: Illumina HiSeq 3000 (Zygosaccharomyces bailii)

organism: Zygosaccharomyces bailii


title: Illumina HiSeq 2500 (Sus scrofa domesticus)

organism: Sus scrofa domesticus


title: Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Gene Name Version)

status: Public on Apr 21 2018

city: Bethesda

first: GEO

last: admin

state: MD

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

description: This platform is based on the "GeneName" column of the raw Feature Extraction files for design ID 028004.

distribution: commercial

relation: Alternative to: GPL13607 (Feature Number version)

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: State Key Laboratory Human microRNA array 1902

city: Guangzhou

first: Xiao-Peng

last: Tian

address: 651 Dong Feng RD East

department: Department of Medical Oncology

institute: Sun Yat-sen University Cancer Center

technology: spotted oligonucleotide

distribution: non-commercial

manufacturer: State Key Laboratory of Oncology in South China,Sun Yat-sen University

manufacture_protocol: 1902 microRNA probes were printed onto slides using the SmartArrayerTM 136 printer (CapitalBio,Inc.,Beijing,China)


title: [RaGene-2_0-st] Affymetrix Rat Gene 2.0 ST Array [ragene20st_Rn_ENST_19.0.0]

status: Public on Apr 20 2018

city: Basel

first: Jonathan

last: Moggs

address: Fabrikstrasse 2

country: Switzerland

institute: Novartis

organism: Rattus norvegicus

description:
Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html
This is identical to GPL17117 but a custom CDF environment was used to extract data [Brainarray Version 19, ragene20st_Rn_ENST ENST_19.0.0]. CDF and other files can be downloaded at: http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp

manufacture_protocol: See manufacturer's web site


title: HiSeq X Ten (feces metagenome)


title: Illumina HiSeq 2500 (Marmota flaviventris)


title: Illumina HiSeq 2000 (synthetic RNA)

status: Public on Apr 19 2018

organism: synthetic RNA


title: Illumina MiSeq (Triticum aestivum)

status: Public on Apr 18 2018

organism: Triticum aestivum


title: RT² Profiler PCR Array Human Prostate Cancer

city: Minneapolis

first: Mohammad

last: Saleem

state: Mn

address: 2231 6th St SE

department: Urology

institute: University of Minnesota

technology: RT-PCR

description:
RT² Profiler™ PCR Array Human Prostate Cancer
SABiosciences RT² Profiler panel of PCR assays.


title: Illumina HiSeq 2000 (Fusarium oxysporum f. sp. lycopersici 4287)


title: Illumina HiSeq 2500 (Homo sapiens; Salmonella enterica subsp. enterica serovar Typhi str. Ty2)

organism:
Homo sapiens
Salmonella enterica subsp. enterica serovar Typhi str. Ty2


title: SurePrint G3 Gene Expression Microarray

city: Bonn

first: Joachim

last: Schultze

state: NRW

address: Carl-Troll-Strasse 31

department: Genomics and Immunoregulation

institute: LIMES (Life and Medical Sciences Center Genomics and Immunoregulation)

organism: Mus musculus

technology: spotted DNA/cDNA


title: Illumina HiSeq 4000 (Cunninghamia lanceolata)

organism: Cunninghamia lanceolata


title: Illumina HiSeq 2500 (Salmonella enterica subsp. enterica serovar Typhi str. Ty2)


title: Illumina HiSeq 4000 (Streptococcus pyogenes)

organism: Streptococcus pyogenes


title: Illumina NextSeq 500 (Staphylococcus epidermidis)

organism: Staphylococcus epidermidis


title: Illumina HiSeq 2000 (Nitraria sibirica)

status: Public on Apr 17 2018

organism: Nitraria sibirica


title: Illumina MiSeq (Xenopus tropicalis)

status: Public on Apr 16 2018

organism: Xenopus tropicalis


title: Illumina HiSeq 2500 (Beta vulgaris)

organism: Beta vulgaris


title: Illumina HiSeq 4000 (Ovis aries)

status: Public on Apr 22 2018

organism: Ovis aries


title: Illumina hiseq 2500 (Homo sapiens)

organism: Homo sapiens


title: Illumina Genome Analyzer IIx (Xenopus tropicalis)


title: Illumina HiSeq 4000 (Rosa rugosa)

status: Public on Apr 15 2018

organism: Rosa rugosa


title: Agilent-070792 Sus scrofa microarray PRRSeval 037880

status: Public on Apr 13 2018

city: Jouy-en-Josas

first: Marco

last: Moroldo

address: Domaine de Vilvert

department: Animal Genetics

country: France

institute: INRA

organism: Sus scrofa

description:
Arrays of this design have barcodes that begin with 16070792 or 2570792.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: HiSeq X Ten (Aedes aegypti)

organism: Aedes aegypti


title: Illumina Genome Analyzer IIx (Geobacter sulfurreducens PCA)

organism: Geobacter sulfurreducens PCA


title: SABiosciences RT² Profiler™ PCR Array Human NFkB Signalling Pathway Plus [PAHS-025YF-2]

city: Tehran

first: Shima

last: Hadifar

address: 12th Farvardin Ave, Jomhhoori St

department: Mycobacteriology and Pulmonary Research

country: Iran

institute: Pasteur Institute of Iran

description:
NFkBs PCR assay panel
SABiosciences RT² Profiler panel of PCR assays.


title: Agilent-025522 SurePrint G3 Canine CGH Microarray 4x180K (PROBE Name version)

organism: Canis lupus familiaris

description:
C. familiaris (Dog) Genome CGH Microarray Rev2, 180K

Arrays of this design have barcodes that begin with 16025522 or 2525522.

Data table annotations based on build canFam2:v2.0:May2005.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: [HuGene-1_1-st] Affymetrix Human Gene 1.1 ST Array (Brainarray ver. 19 custom CDF)

city: Thunder Bay

first: Bradley

last: Vis

address: 955 Oliver Rd

country: Canada

institute: Lakehead University


title: Parasteatoda tepidariorum CombiMatrix CustomArray_12K_v1

city: Takatsuki

first: Hiroki

last: Oda

state: Osaka

address: 1-1 Murasaki-cho

country: Japan

institute: JT Biohistory Research Hall

organism: Parasteatoda tepidariorum

manufacture_protocol: Please refer to the manufacturer's website.


title: RiboArray Rat mRNA Array

city: Hang Zhou

first: Juan

last: Liu

address: 866 Yuhangtang Road

institute: Key Laboratory of Animal Virology of Ministry of Agriculture, Zhejiang University

organism: Rattus norvegicus


title: Illumina HiSeq 2000 (Rhodotorula toruloides)

organism: Rhodotorula toruloides


title: Illumina HiSeq 4000 (Botryosphaeria dothidea)

status: Public on Apr 12 2018

organism: Botryosphaeria dothidea


title: Illumina HiSeq 2500 (Fragaria x ananassa)

organism: Fragaria x ananassa


title: Illumina HiSeq 2500 (Trichinella pseudospiralis)

organism: Trichinella pseudospiralis


title: Illumina HiSEq 2500 (Homo sapiens)


title: NanoString mouse cancer immune panel (NS_Mm_CancerImm_C3400)

status: Public on Apr 11 2018

city: Columbus

first: NADUPARAMBIL

middle: Korah

last: JACOB

state: Ohio

address: 410 W 12th Ave

department: Radiation Oncology

institute: The Ohio State University

organism: Mus musculus

technology: other

manufacture_protocol: See manufacturer's website (http://www.nanostring.com)


title: Illumina HiSeq 2500 (Methanocaldococcus jannaschii; Thermococcus paralvinellae)

organism:
Methanocaldococcus jannaschii
Thermococcus paralvinellae


title: Illumina HiSeq 2500 (Methanocaldococcus jannaschii)

organism: Methanocaldococcus jannaschii


title: Illumina NextSeq 500 (Acomys cahirinus)

organism: Acomys cahirinus


title: 3D-Gene Mouse miRNA V21_1.0.0

city: Kodaira

first: Hirohiko

last: Hohjoh

state: Tokyo

address: 4-1-1 Ogawahigashi

institute: National Institute of Neuroscience, NCNP

manufacture_protocol: See manufacture's web site


title: Agilent-034462 Yeast_4x180K [PROBE NAME]

city: Montreal

first: Francois

last: Robert

state: QC

address: 110 av des Pins Ouest

institute: IRCM

organism: Saccharomyces cerevisiae

description:
Arrays of this design have barcodes that begin with 16034462 or 2534462.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Illumina HiSeq 2000 (Drosophila santomea)

status: Public on Apr 09 2018

last: GEO

organism: Drosophila santomea


title: SABiosciences RT² Profiler™ PCR Array Human Toll-Like Receptor Signaling Pathway [PAHS-018Z]

organism: Homo sapiens

description:
TLRs PCR assay panel
SABiosciences RT² Profiler panel of PCR assays.


title: Ion Torrent Proton (Lichtheimia ramosa)

organism: Lichtheimia ramosa


title: Illumina MiSeq (Enterococcus faecalis)

status: Public on Apr 10 2018

organism: Enterococcus faecalis


title: Ion Torrent Proton (Lichtheimia corymbifera)

organism: Lichtheimia corymbifera


title: Illumina HiSeq 2500 (Rattus rattus)

organism: Rattus rattus


title: BGISEQ-500 (Pseudomonas protegens)

organism: Pseudomonas protegens


title: Ion Torrent Proton (Lichtheimia hyalospora)

organism: Lichtheimia hyalospora


title: PacBio RS II (Asparagus officinalis)

status: Public on Apr 06 2018

organism: Asparagus officinalis


title: PacBio RS II (Hemerocallis lilioasphodelus)

organism: Hemerocallis lilioasphodelus


title: Illumina NextSeq 500 (Oryctolagus cuniculus)

organism: Oryctolagus cuniculus


title: Illumina NextSeq 500 (Xenopus tropicalis)

organism: Xenopus tropicalis


title: 100520_MM9_KF_Meth_HX3  HELP promoter

city: Barcelona

first: Ana

last: Sevilla

state: Barcelona

address: Avda Diagonal 643. Edificio Malagef 4rd Floor, Faculty of Biology

department: Departamento de Biologia Celular, Fisiologia e Inmunologia

country: Spain

institute: Universidad de Barcelona

organism: Mus musculus

description:
We used the HELP mouse promoter arrays MM9_HX3 on a 720K platform which is designed to cover 117,000 HpaII amplifiable fragments (genomic sequences between two flanking HpaII sites 200-2,000 bp apart) within CpG islands and promoters of the well characterized RefSeq genes derived from the UCSC RefFlat files (http://www.nimblegen.com/)
Custom DNA methylation microarray 100520_ MM9_KF_Meth_HX3  for the HELP assay, cat number 05924553001. The .ndf and .ngd files are linked below as supplementary files.
100520_MM9_KF_Meth.ndf
100520_MM9_KF_Meth.pos

manufacture_protocol: see manufacturer's web site www.nimblegen.com


title: Illumina HiSeq 2500 (Asparagus officinalis)


title: Illumina HiSeq 2500 (Hemerocallis lilioasphodelus)


title: Illumina HiSeq 2500 (Phaseolus vulgaris)

organism: Phaseolus vulgaris


title: Illumina NextSeq 500 (Drosophila melanogaster; Gallus gallus)

status: Public on Apr 05 2018

organism:
Drosophila melanogaster
Gallus gallus


title: Illumina HiSeq 4000 (Gallus gallus; Homo sapiens)

organism:
Gallus gallus
Homo sapiens


title: Illumina NextSeq 500 (Capsicum frutescens)

organism: Capsicum frutescens


title: Illumina HiSeq 4000 (Drosophila melanogaster; Gallus gallus)


title: Illumina HiSeq 3000 (Bubalus bubalis)

organism: Bubalus bubalis


title: Illumina NextSeq 500 (Capsicum chinense)

organism: Capsicum chinense


title: Illumina NextSeq 500 (Streptococcus pyogenes)

organism: Streptococcus pyogenes


title: Illumina HiSeq 3000 (Caenorhabditis elegans)

organism: Caenorhabditis elegans


title: [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [noncoder version]

city: Copenhagen SV

first: Shizuka

last: Uchida

email: heart.lncrna@gmail.com, suc@dcm.aau.dk

address: Frederikskaj 10B, 2. (building C)

department: Department of Clinical Medicine

country: Denmark

institute: Aalborg University

description:
Re-annotation of exon array probes can be used to profile expressions of tens of thousands of long non-coding RNAs (lncRNAs).
Chromosome coordinates based on mm9.


title: Illumina NextSeq 500 (Wolfiporia cocos)

status: Public on Apr 03 2018

organism: Wolfiporia cocos


title: Illumina NextSeq 500 (Microbotryum lychnidis-dioicae)

organism: Microbotryum lychnidis-dioicae


title: Illumina MiSeq (Pseudomonas aeruginosa PAK)

organism: Pseudomonas aeruginosa PAK


title: Illumina HiSeq 4000 (other sequences)

status: Public on Apr 04 2018

organism: other sequences


title: Illumina NextSeq 500 (Sporobolomyces roseus)

organism: Sporobolomyces roseus


title: Illumina NextSeq 500 (Syncephalis fuscata)

organism: Syncephalis fuscata


title: Illumina NextSeq 500 (Tilletiopsis washingtonensis)

organism: Tilletiopsis washingtonensis


title: Illumina NextSeq 500 (Spinellus fusiger)

organism: Spinellus fusiger


title: Agilent-046064 Human miRNA Microarray, Release 19.0, 8x60K (miRNA_ID version)

city: Hangzhou

first: Jun

last: Lin

address: No. 1 Xueshi Road, Uptown District

institute: Department of Obstetrics, The Women’s Hospital, School of Medicine, Zhejiang University

organism: Homo sapiens

description: One glass slide formatted with eight high-definition 60K arrays. Based on miRBase Release 19.0.


title: Illumina HiSeq 2500 (Brassica juncea)

organism: Brassica juncea


title: Illumina NextSeq 500 (Pseudogymnoascus destructans)

organism: Pseudogymnoascus destructans


title: Illumina NextSeq 500 (Radiomyces spectabilis)

organism: Radiomyces spectabilis


title: Illumina NextSeq 500 (Flammula alnicola)

organism: Flammula alnicola


title: Illumina NextSeq 500 (Pleurotus ostreatus)

organism: Pleurotus ostreatus


title: Illumina MiSeq (Parasteatoda tepidariorum)

organism: Parasteatoda tepidariorum


title: Illumina NextSeq 500 (Phanerochaete chrysosporium)

organism: Phanerodontia chrysosporium


title: Illumina NextSeq 500 (Podospora anserina)

organism: Podospora anserina


title: Illumina NextSeq 500 (Mixia osmundae)

organism: Mixia osmundae


title: Illumina NextSeq 500 (Kirkomyces cordense)

organism: Kirkomyces cordensis


title: Illumina NextSeq 500 (Parasitella parasitica)

organism: Parasitella parasitica


title: Illumina NextSeq 500 (Lobosporangium transversale)

organism: Lobosporangium transversale


title: Illumina NextSeq 500 (Leptosphaeria maculans)

organism: Plenodomus lingam


title: Illumina NextSeq 500 (Coemansia spiralis)

organism: Coemansia spiralis


title: Illumina NextSeq 500 (Coemansia reversa)

organism: Coemansia reversa


title: Illumina NextSeq 500 (Hesseltinella vesiculosa)

organism: Hesseltinella vesiculosa


title: Illumina NextSeq 500 (Aureobasidium pullulans)

organism: Aureobasidium pullulans


title: Illumina NextSeq 500 (Fusarium fujikuroi)

organism: Fusarium fujikuroi


title: Agilent-026441 Whole Chicken  Genome Custom Microarray 4x44k format

status: Public on Apr 01 2018

city: Utrecht

first: Aldert

last: Zomer

address: Yalelaan 1

department: Department of Infectious Diseases and Immunology,Faculty of Veterinary Medicine

country: Netherlands

institute: Utrecht University

organism: Gallus gallus

description:
Chicken_agilent_v1.0_76_4
42034 Gallus gallus 60-mer probes in a 4x44K layout

manufacture_protocol: Agilent SurePrint technology. Both catalog and custom microarrays are manufactured using a proprietary non-contact industrial inkjet printing process, in which oligo monomers are deposited uniformly onto specially-prepared glass slides. This in situ synthesis process prints 60-mer length oligonucleotide probes, base-by-base, from digital sequence files.


title: Illumina NextSeq 500 ([Candida] auris)

organism: Candidozyma auris


title: Mus musculus Wound Tissue Array

city: Hannover

first: Frank

last: Stahl

address: Callinstr. 3

department: Institut für Technische Chemie

institute: Universität Hannover

organism: Mus musculus

manufacture_protocol: Oligonucleotide design and synthesis: 50mer oligonucleotides with a 5’ aminolink were designed and synthesised by Invitrogen (Darmstadt, Germany). Spotting protocol: To produce microarrays silylated slides were purchased from TeleChemTM International Inc. (Sunnyvale, CA, USA) and the printing of the oligonucleotides was performed by using an AffymetrixTM 417 arrayer. Oligonucleotide solutions were prepared in 96-well-plates containing each 30 µl. The concentration of the printed oligonucleotides was 50 µM in 1x ArrayItTM Microarray Spotting Solution Plus. After spotting, the slides were incubated at 80 °C for 2 h. Slides were blocked in SSC containing 1% BSA (Sigma) for 45 min and rinsed with water for 5 min.


title: Illumina NextSeq 500 (Botrytis cinerea)

organism: Botrytis cinerea


title: Illumina NextSeq 500 (Lachancea thermotolerans)

organism: Lachancea thermotolerans


title: Illumina NextSeq 500 (Lachancea thermotolerans; Saccharomyces cerevisiae)

organism:
Saccharomyces cerevisiae
Lachancea thermotolerans


title: Illumina NextSeq 500 (Agaricus bisporus)

organism: Agaricus bisporus


title: Agilent-029560 Hydra viridissima transcriptome-based custom microarray (Feature number version)

city: Setouchi

first: Mayuko

last: Hamada

state: Okayama

address: 130-17, Kashino, Ushimado

institute: Okayama University

organism: Hydra viridissima


title: Illumina HiSeq 1500 (Glycine max)

organism: Glycine max


title: Illumina HiSeq 2000 (Pleurotus ostreatus)

status: Public on Apr 02 2018

organism: Pleurotus ostreatus


title: NanoString nCounter human Gene Expression Custom CodeSet

city: Brussel

first: Yacine

last: Bareche

address: Rue Héger-Bordetstraat 1

country: Belgium

institute: Jules Bordet Institute

organism: Homo sapiens


title: NanoString nCounter XT Gene Expresion Assays Custom CodeSet Pao

city: Frankfurt

first: Peter

last: Mombaerts

address: Max-von-Laue-Str. 4

institute: Max Planck Research Unit for Neurogenetics


title: Illumina HiSeq 2500 (Campylobacter jejuni)

status: Public on Mar 31 2015

organism: Campylobacter jejuni


title: Illumina HiSeq 4000 (Cryptococcus neoformans var. neoformans)

status: Public on Jan 26 2017

organism: Cryptococcus deneoformans


title: Bernard Lab PAM50 qRT-PCR assay

city: Salt Lake City

first: Nicola

middle: J

last: Camp

state: UT

address: 2000 Cir of Hope Dr

department: Huntsman Cancer Institute

institute: University of Utah

description: PAM50 qRT-PCR assay


title: Illumina HiSeq 2500 (Helianthus annuus)

organism: Helianthus annuus


title: NimbleGen C. elegans 120618_Cele_WS230_JK_CGH

status: Public on Apr 15 2015

city: Albuquerque

first: Ulfar

last: Bergthorsson

state: New Mexico

address: 219 Yale Blvd NE

department: Biology

institute: University of New Mexico

organism: Caenorhabditis elegans

description: 3-plex microarray with each individual sub-array comprising 720K 50-mer oligonucleotide probes sythesized at random positions on the array. Probe selection did not focus on coding regions to provide a more uniform coverage of the genome.  Based on genome build Wormbase WS230.

manufacture_protocol: See manufacturer's website


title: Illumina HiSeq 2500 (Zea mays subsp. mays)

status: Public on Apr 02 2014

organism: Zea mays subsp. mays


title: Illumina HiSeq 2500 (Xenopus laevis)

status: Public on Jul 10 2014

organism: Xenopus laevis


title: Illumina HiSeq 2500 (Oryza sativa Indica Group)

status: Public on Oct 14 2015

organism: Oryza sativa Indica Group


title: Agilent-025522 SurePrint G3 Canine CGH Microarray 4x180K (Feature Number version)

status: Public on Mar 10 2010

city: Palo Alto

last: Agilent Technologies

state: CA

institute: Agilent Technologies

organism: Canis lupus familiaris


title: NanoString nCounter Human v3 miRNA Assay (NS_H_miR_v3a)

status: Public on Feb 08 2018

city: Augusta

first: Yutao

state: GA

address: 1120 15th Street

department: Cell Biology and Anatomy

institute: Medical College of Georgia

manufacture_protocol: See manufacturer's website (www.nanostring.com)


title: Applied Biosystems Taqman Low Density Array Human microRNA Card A

status: Public on Apr 19 2013

city: Bethesda

first: GEO

last: admin

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

manufacture_protocol: See manufacturer's website (http://www.appliedbiosystems.com/).


title: 3D-Gene Mouse Oligo chip 24k

status: Public on Aug 11 2007

city: Kamakura

first: Satoko

last: Takizawa

state: Kanagawa

address: 6-10-1 Tebiro

department: New Frontiers Research Laboratories

institute: TORAY Industries, Inc.

organism: Mus musculus

description: Ultra-sensitive DNA chip for mouse genome wide gene expression analysis


title: [HT_HG-U133_Plus_PM] Affymetrix HT HG-U133+ PM Array Plate

status: Public on Feb 11 2011

city: Santa Clara

last: Affymetrix

institute: Affymetrix, Inc.

description:
Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

Annotations derived from HT_HG-U133_Plus_PM.na31.annot.csv

relation: Alternative to: GPL15798 (Alternative CDF)

relation: Alternative to: GPL17295 (HTHGU133PlusPM_Hs_ENTREZG_v15)

relation: Alternative to: GPL19309 (alternative CDF: HTHGU133PlusPM_Hs_ENTREZG_v15.1.0)

manufacture_protocol: see manufacturer's web site