title: Illumina NovaSeq 6000 (Meyerozyma guilliermondii ATCC 6260; Mus musculus)

status: Public on May 30 2020

last: GEO

country: USA

organism:
Mus musculus
Meyerozyma guilliermondii ATCC 6260

technology: high-throughput sequencing

distribution: virtual


title: Illumina NovaSeq 6000 (Meyerozyma guilliermondii ATCC 6260)

organism: Meyerozyma guilliermondii ATCC 6260


title: BGISEQ-500 (Verticillium dahliae)

status: Public on May 28 2020

organism: Verticillium dahliae


title: Illumina HiSeq 1500 (Mirounga angustirostris)

status: Public on May 31 2020

organism: Mirounga angustirostris


title: NanoString nCounter Human Gene Expression Assay Custom CodeSet [Oxford Classifier of Carcinoma of the Ovary]

status: Public on Dec 14 2020

city: Oxford

first: Zhiyuan

last: Hu

address: John Radcliffe Hospital/Headley Way

department: MRC Weatherall Institute of Molecular Medicine

country: United Kingdom

institute: University of Oxford

organism: Homo sapiens

technology: other

distribution: custom-commercial


title: Illumina HiSeq 2500 (Molineria capitulata)

organism: Molineria capitulata


title: NanoString Human Immunology v2 Code Set (NS_Immunology_v2_C2328+PLS_Golden_1_C5164)

status: Public on Jul 08 2020

city: Aurora

first: Michael

middle: S

last: Kriss

state: CO

institute: University of Colorado School of Medicine

description: NanoString Technologies (oligonucleotide hybridization)

manufacture_protocol: See manufacturer's website (http://www.nanostring.com)


title: Illumina HiSeq 2500 (Methanosarcina mazei Go1)

organism: Methanosarcina mazei Go1


title: HiSeq X Ten (Pseudomonas aeruginosa PAO1)

organism: Pseudomonas aeruginosa PAO1


title: Illumina HiSeq 2500 (Molineria latifolia)

organism: Molineria latifolia


title: nCounter® PanCancer Mouse Pathways Panel

city: Kuala Lumpur

first: Won

middle: Fen

last: Wong

address: Lembah Pantai

department: Department of Medical Microbiology,  Faculty of Medicine

country: Malaysia

institute: University of Malaya

organism: Mus musculus

distribution: commercial


title: BGISEQ-500 (Pseudomonas aeruginosa PAO1)


title: Illumina HiSeq 2000 (Lodderomyces elongisporus)

status: Public on May 27 2020

organism: Lodderomyces elongisporus


title: Illumina HiSeq 2000 (Lodderomyces elongisporus; Mus musculus)

organism:
Mus musculus
Lodderomyces elongisporus


title: Illumina HiSeq 2000 (Candida parapsilosis; Mus musculus)

organism:
Candida parapsilosis
Mus musculus


title: Illumina HiSeq 2000 (Clavispora lusitaniae; Mus musculus)

organism:
Mus musculus
Clavispora lusitaniae


title: Illumina HiSeq 2000 (Candida dubliniensis; Mus musculus)

organism:
Mus musculus
Candida dubliniensis


title: NanoString Human nCounter MAPK-PI3K Pathway Panel

status: Public on May 25 2020

city: Mineola

first: Douglas

last: Marks

state: NY

address: 120 Mineola Boulevard

institute: NYU Langone Health

description: Item Number: 115010045

manufacture_protocol: See manufacturer's website (www.nanostring.com).


title: Illumina HiSeq 2500 (Gloeophyllum trabeum; Postia placenta)

status: Public on May 21 2020

organism:
Rhodonia placenta
Gloeophyllum trabeum


title: Illumina HiSeq 1500 (Acipenser baerii)

status: Public on May 23 2020

organism: Acipenser baerii


title: Illumina HiSeq 2500 (Etroplus suratensis)

organism: Etroplus suratensis


title: Illumina NextSeq 500 (Porphyromonas gingivalis)

organism: Porphyromonas gingivalis


title: Illumina HiSeq 2500 (Laetiporus sulphureus)

organism: Laetiporus sulphureus


title: Illumina NextSeq 500 (Severe acute respiratory syndrome coronavirus 2)


title: Illumina NextSeq 500 (Serratia marcescens)

organism: Serratia marcescens


title: Illumina HiSeq 2000 (Candida tropicalis; Mus musculus)

organism:
Candida tropicalis
Mus musculus


title: Illumina NextSeq 500 (Aspergillus nidulans)

status: Public on May 29 2020

organism: Aspergillus nidulans


title: Illumina HiSeq 2500 (Francisella tularensis)

status: Public on May 20 2020

organism: Francisella tularensis


title: Illumina HiSeq 2500 (Shewanella baltica)

organism: Shewanella baltica


title: Illumina HiSeq 2500 (Bdellovibrio bacteriovorus)

organism: Bdellovibrio bacteriovorus


title: GridION (Mus musculus)

organism: Mus musculus


title: Illumina NovaSeq 6000 (Agrobacterium fabrum str. C58)

organism: Agrobacterium fabrum str. C58


title: Agilent-073237 Genotypic_EA905_Arabidopsis_2x400K_CoC_Array_073237

status: Public on Nov 11 2020

city: Kolkata

first: Shubho

last: Chaudhuri

state: West Bengal

address: P1/12 C.I.T Scheme VII M

country: India

institute: Bose Institute

organism: Arabidopsis thaliana

technology: in situ oligonucleotide

manufacture_protocol: The oligonucleotide microarray is composed of 414567 , 60 mer oligonucleotides.


title: Illumina Genome Analyzer IIx (Bacillus anthracis str. Vollum)

status: Public on May 26 2020

organism: Bacillus anthracis str. Vollum


title: Illumina HiSeq 4000 (Saccharopolyspora erythraea)

organism: Saccharopolyspora erythraea


title: Applied Biosystems Taqman Low Density Array Human microRNA

city: Marburg

first: Wilhelm

last: Bertrams

address: Hans-Meerwein-Str. 2

department: Institute for Lung Research

country: Germany

institute: Philipps University Marburg

organism: Homo sapiens

technology: RT-PCR

description: PCR assay

manufacture_protocol: see manufacturer's website


title: NanoString nCounter custom profiling panel by Dwu

status: Public on May 22 2020

city: Vancouver

first: Dan

last: Wu

address: 950 West 28th Avenue

country: Canada

institute: BC Children's Hospital Research Institute

manufacture_protocol: See manufacturer's website http://www.nanostring.com


title: Human Signaling Pathways (SignArrays®) 384 system

status: Public on May 19 2020

city: Paris

first: Julie

last: Delyon

address: 1 avenue Claude Vellefaux

department: Dermatology

country: France

institute: Hopital Saint-Louis

description: PCR assay


title: Illumina NovaSeq 6000 (Homo sapiens; Staphylococcus aureus)

organism:
Staphylococcus aureus
Homo sapiens


title: nCounter Mouse miRNA V 1.5 panel

city: Moscow

first: Polina

last: Vishnyakova

address: Oparina 4

country: Russia

institute: National Medical Research Center for Obstetrics, Gynecology and Perinatology


title: Illumina HiSeq 4000 (Synechococcus phage S-SBP1; Synechococcus sp. WH 7803)

status: Public on May 18 2020

organism:
Synechococcus sp. WH 7803
Synechococcus phage S-SBP1


title: Illumina NextSeq 500 (Salmonella enterica subsp. enterica serovar Javiana)


title: Illumina HiSeq 2500 (Pundamilia nyererei)

organism: Pundamilia nyererei


title: Illumina HiSeq 2500 (Prunus domestica x Prunus domestica subsp. insititia)


title: Illumina NovaSeq 6000 (Mycolicibacterium smegmatis)

organism: Mycolicibacterium smegmatis


title: Illumina NextSeq 500 (Salmonella enterica subsp. enterica serovar Cerro)


title: Illumina HiSeq 4000 (Planococcus kocurii)

status: Public on May 15 2020

organism: Planococcus kocurii


title: Illumina HiSeq 2500 (Parastagonospora nodorum; Triticum aestivum)

status: Public on May 13 2020

organism:
Triticum aestivum
Parastagonospora nodorum


title: OE Biotech Human ceRNA Microarray, Design ID:086188

city: Xi’an

first: Huayu

last: Zhu

state: Shaanxi

address: Changle Xilu 15

department: Department of Burns and Cutaneous Surgery, Xijing Hospital

country: China

institute: Fourth Military Medical University

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Illumina HiSeq 2500 (Parastagonospora nodorum)

organism: Parastagonospora nodorum


title: Illumina NextSeq 500 (Clostridium butyricum)

status: Public on May 14 2020

organism: Clostridium butyricum


title: Illumina HiSeq 2500 (Ambrosia trifida)

organism: Ambrosia trifida


title: Qiagen Human Custom RT² lncRNA qPCR Arrays Chemotherapy Resistance

city: Shenyang

first: Yanfeng

last: Cheng

address: No. 36 Sanhao Street

institute: Shengjing Hospital of China Medical University

description: qPCR assay


title: Qiagen Mouse Synaptic Plasticity RT² Profiler PCR Array (PAMM-126Z)

city: Houston

first: Melinda

middle: Anne

last: Engevik

state: TX

address: 1 Baylor Plaza

department: Pathology & Immunology

institute: Baylor College of Medicine


title: Illumina HiSeq 3000 (Arthrobacter sp. Soil763)

status: Public on May 12 2020

organism: Arthrobacter sp. Soil763


title: Phalanx Human CytoOneArray v3.0

city: Hsinchu

first: Sandy

last: Lin

address: 6F, NO.6 Technology Road 5

department: Product Dept.

country: Taiwan

institute: Phalanx Biotech Inc

technology: spotted oligonucleotide

manufacture_protocol: See http://www.phalanxbiotech.com/ for updated protocols


title: Illumina NovaSeq 6000 (Daphnia magna)

organism: Daphnia magna


title: Illumina HiSeq 3000 (Flavobacterium sp. Root935)

organism: Flavobacterium sp. Root935


title: Illumina HiSeq 2500 (Callitropsis nootkatensis)

organism: Callitropsis nootkatensis


title: Illumina HiSeq 4000 (Beauveria bassiana)

organism: Beauveria bassiana


title: Oryzon Mouse Expression WGA eArray N12 2 x 105K Design ID 017498

city: Cornella de Llobregat

first: Tamara

last: Maes

state: Barcelona

address: Carrer Sant Ferran 74

department: R&D

country: Spain

institute: Oryzon Genomics S.A.

organism: Mus musculus

description: Oryzon_Mouse_Expression_WGA_eArrayN12_2x105K_Design ID 017498_Control Grid IS-105072-2-V1_105K_GX_EQC_V20060608

manufacture_protocol:
http://www.agilent.com
28122 Mus Musculus gene specific probes (3-plicate) and 12 Zea mays positive and negative control probes (4 for EXPANSIN, 4 for ZmMYB42, and 4 for XET xyloglucan endo-transglycosylase), in 1615-plicate.


title: Illumina HiSeq 4000 (Synechococcus sp. WH 7803)

organism: Synechococcus sp. WH 7803


title: nCounter Mouse PanCancer Immune Profiling Panel

city: Bethesda

first: Maggie

middle: C

last: Cam

state: MD

address: Bldg 37, Rm 1136A, 37 Convent Drive

department: NCI

institute: NIH

manufacture_protocol: See manufacturer's website


title: Illumina HiSeq 4000 (Brassica oleracea var. botrytis)

organism: Brassica oleracea var. botrytis


title: Illumina HiSeq 3000 (Acinetobacter sp. Leaf130)

organism: Acinetobacter sp. Leaf130


title: Illumina HiSeq 3000 (Burkholderia sp. Leaf177)

organism: Burkholderia sp. Leaf177


title: Illumina HiSeq 3000 (Rhizobium sp. Leaf155)

organism: Rhizobium sp. Leaf155


title: Illumina HiSeq 3000 (Pedobacter sp. Leaf176)

organism: Pedobacter sp. Leaf176


title: Illumina HiSeq 3000 (Plantibacter sp. Leaf1)

organism: Plantibacter sp. Leaf1


title: Illumina HiSeq 3000 (Danaus plexippus)

organism: Danaus plexippus


title: Illumina HiSeq 3000 (Chryseobacterium sp. Leaf404)

organism: Chryseobacterium sp. Leaf404


title: Illumina HiSeq 4000 (Lonchura striata domestica)

organism: Lonchura striata


title: Illumina NovaSeq 6000 (Anguilla anguilla)

status: Public on May 11 2020

organism: Anguilla anguilla


title: Illumina HiSeq 3000 (Blumeria graminis f. sp. hordei; Hordeum vulgare)

organism:
Hordeum vulgare
Blumeria hordei


title: Illumina HiSeq 4000 (Salmonella enterica)

organism: Salmonella enterica


title: Illumina NovaSeq 6000 (Dugesia japonica; Schmidtea mediterranea)

organism:
Dugesia japonica
Schmidtea mediterranea


title: Illumina MiniSeq (Trypanosoma brucei brucei)

organism: Trypanosoma brucei brucei


title: NextSeq 550 (unidentified plasmid)

organism: unidentified plasmid


title: Ion Torrent S5 (Macaca nemestrina)

organism: Macaca nemestrina


title: Agilent Custom Calotropis Gene Expression 8x60K Array (AMADID: 085482)

status: Public on May 10 2020

city: Bangalore

first: Genotypic

last: technology

state: Karnataka

address: 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE

institute: Genotypic Technology

organism: Calotropis procera

description: designed by Dr. Vineeta Tripathi with the help of Genotypic Technology Private Limited, Bangalore


title: Illumina HiSeq 2000 (Clostridium tetani)

status: Public on May 08 2020

last: GEO

organism: Clostridium tetani


title: Illumina HiSeq 4000 (Trypanosoma brucei brucei)


title: Illumina HiSeq 4000 (Escherichia coli O157:H7)

organism: Escherichia coli O157:H7


title: Antigen Discovery Inc. Chlamydia trachomatis Protein Array

city: Irvine

first: Arlo

middle: Zan

last: Randall

state: CA

address: 1 Technology Drive, Suite E309

institute: Antigen Discovery Inc

organism: Chlamydia trachomatis

technology: spotted peptide or protein

description: printed without purification from E. coli cell free expression system


title: Agilent-079303 Mouse Array [ProbeName version]

city: Nuthetal

first: Heike

last: Vogel

state: BRB

address: Arthur-Scheunert-Allee 114-116

department: Department of Experimental Diabetology

institute: German Institute of Human Nutrition Potsdam-Rehbruecke

organism: Mus musculus

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Illumina HiSeq 4000 (Leptosphaeria maculans 'lepidii' group)

organism: Plenodomus lingam/Leptosphaeria maculans 'lepidii' group


title: RayBio G-Series Human T-Helper Cell 1/2/17 Antibody Array 1

city: Bloomington

first: Patricia

last: Silveyra

email: psilveyr@iu.edu, ptrcslvr@gmail.com

state: Indiana

department: Environmental and Occupational Health

institute: Indiana University Bloomington

organism: Homo sapiens

technology: antibody

manufacture_protocol: See manufacturer's website (https://www.raybiotech.com/glass-slide-antibody-arrays/)


title: Illumina HiSeq 4000 (Leptosphaeria maculans 'brassicae' group)

organism: Plenodomus lingam/Leptosphaeria maculans 'brassicae' group


title: Illumina HiSeq 2500 (Crocodylus porosus)

organism: Crocodylus porosus


title: Illumina HiSeq 2000 (Leptosphaeria maculans 'lepidii' group)


title: Illumina HiSeq 2500 (Notolabrus celidotus)

organism: Notolabrus celidotus


title: Illumina HiSeq 2000 (Leptosphaeria maculans 'brassicae' group)


title: Illumina NextSeq 500 (Danio rerio; Oryzias latipes)

status: Public on May 07 2020

organism:
Danio rerio
Oryzias latipes


title: Illumina NextSeq 500 (Mycobacterium tuberculosis variant bovis BCG)


title: Illumina HiSeq 2500 (Mycobacterium marinum M)

status: Public on May 06 2020

organism: Mycobacterium marinum M


title: Illumina HiSeq 3000 (Exiguobacterium sp. Leaf187)

organism: Exiguobacterium sp. Leaf187


title: NextSeq 550 (Canis lupus familiaris)

organism: Canis lupus familiaris


title: BGISEQ-500 (Macaca fascicularis)

organism: Macaca fascicularis


title: Illumina Novaseq 6000 (Macaca fascicularis)


title: Illumina HiSeq 4000 (Nannochloropsis oceanica)

status: Public on May 05 2020

organism: Nannochloropsis oceanica


title: Illumina NextSeq 500 (Pseudomonas putida KT2440)

status: Public on May 04 2020

organism: Pseudomonas putida KT2440


title: Illumina NextSeq 500 (Armillaria cepistipes)

status: Public on May 01 2020

organism: Armillaria cepistipes


title: Ion Torrent PGM (Pseudomonas syringae pv. actinidiae)

organism: Pseudomonas syringae pv. actinidiae


title: Illumina NovaSeq 6000 (Paralichthys lethostigma)

organism: Paralichthys lethostigma


title: Illumina NextSeq 500 (Chlorocebus aethiops aethiops; Severe acute respiratory syndrome coronavirus 2)

organism:
Chlorocebus aethiops aethiops
Severe acute respiratory syndrome coronavirus 2


title: Illumina HiSeq 3000 (Citrus sinensis)

status: Public on May 02 2020

organism: Citrus sinensis


title: Illumina HiSeq 2500 (Nesocodon mauritianus)

organism: Nesocodon mauritianus


title: Illumina MiSeq (Suid alphaherpesvirus 1)

organism: Suid alphaherpesvirus 1


title: Illumina HiSeq 4000 (Porcine epidemic diarrhea virus)

status: Public on May 21 2020

organism: Porcine epidemic diarrhea virus


title: Illumina NextSeq 500 (Solenopsis invicta)

organism: Solenopsis invicta


status: Public on Jul 06 2016

city: South San Francisco

first: Richard

last: Bourgon

address: 1 DNA Way, MS 93

department: Bioinformatics & Computational Biology

institute: Genentech, Inc.

organism: Homo sapiens

description:
Genentech glioblastoma custom panel GBM_GNE_C1954 (see GBM_GNE_C1954.RLF for exact probe and target specification)
NanoString nCounter Gene Expression Assay


title: Illumina NovaSeq 6000 (Microtus ochrogaster)

organism: Microtus ochrogaster


title: NimbleGen Arabidopsis 12 x 135K array for TAIR10 genome release [120110_Athal_MG_expr]

status: Public on Jun 20 2015

city: Coventry

first: Miriam

last: Gifford

address: Gibbet Hill Road

department: School of Life Sciences

institute: University of Warwick

organism: Arabidopsis thaliana

manufacture_protocol: The array was designed (OID37507) and manufactured according to NimbleGen protocols


title: NanoString Prognostic Liver Signature (PLS) panel (186 genes, ver.0)

status: Public on Jan 31 2014

city: Dallas

first: Yujin

last: Hoshida

address: 5323 Harry Hines Blvd

institute: University of Texas Southwestern Medical Center


title: Illumina NovaSeq 6000 (Saccharomyces cerevisiae BY4741)

organism: Saccharomyces cerevisiae BY4741


title: NanoString Prognostic Liver Signature (PLS) panel (186 genes, ver.1)

status: Public on Mar 13 2015


title: Fluidigm BioMark Sus Scrofa qPCR

city: Philadelphia

first: Rajanikanth

last: Vadigepalli

state: PA

address: 1020 Locust St, 314C

department: Pathology

institute: Jefferson University

organism: Sus scrofa

description:
PCR assay
Primers obtained from IDT

manufacture_protocol: see manufacturer website


title: NanoString Prognostic Liver Signature panel (PLS) - Slim (32 genes)

status: Public on Dec 16 2016

description: Color-coded bead-based digital transcript counting


title: Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Feature Number Version]

status: Public on Aug 24 2015

city: Palo Alto

last: Agilent Technologies

institute: Agilent Technologies

description:
Catalog gene expression microarray for Human, v3 8x60K

Arrays of this design have barcodes that begin with 16072363 or 2572363.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.

relation: Alternative to: GPL21185 (Probe Name Version)

relation: Alternative to: GPL25261 (Gene Name version)