title: Microarrays of yeast nuclearly encoded tRNAs

status: Public on Aug 18 2021

city: Hamburg

first: Zoya

last: Ignatova

address: Martin -Luther-King-Platz 6

country: Germany

institute: Universitaet Hamburg

organism: Saccharomyces cerevisiae

technology: spotted oligonucleotide

distribution: non-commercial

manufacturer: Fraunhofer Institute for Biomedical Research (Potsdam, Germany)

first: Christine

last: Polte

first: Martine

last: Collart

manufacture_protocol:
1. Oligos were arrayed in 384 well plates with a final concentration of 10 µM in 3× SSC/0.01% SDS in a total volume of 25 µl.
2. Arrays were printed onto (3-Glycidyloxypropyl)trimethoxysilane (Sigma) activated glas slides using a contact-spotter (QArray 2, Moleculare Devices).
3. After spotting arrays were incubated overnight at 4°C in a humidified atmosphere and subsequently dried for 30 min at 30°C.
4. Arrays were stored in a dry atmosphere at room temperature until use.


title: miRCURY LNA miRNome PCR Panels for Serum, PCR Panels I+II

status: Public on Dec 14 2021

city: Madrid

first: ELISA

last: CONDE MORENO

address: Carretera de Colmenar KM9.100

department: Pathology

country: Spain

institute: Instituto Ramón y Cajal de Investigación Sanitaria, IRYCIS

organism: Homo sapiens

technology: RT-PCR

description: PCR assay

distribution: custom-commercial

manufacture_protocol: see manufacturer's website


title: NanoString nCounter Mouse RNA Expression Assay

status: Public on Nov 23 2020

city: Stanford

first: Paras

middle: Singh

last: Minhas

state: California

address: 1201 Welch Road

department: Neurology & Neurological Sciences

country: USA

institute: Stanford University

organism: Mus musculus

technology: in situ oligonucleotide

manufacture_protocol: See manufacturer's website (www.nanostring.com)


title: NCode Multi-Species miRNA Microarray V2

status: Public on Aug 31 2020

city: Bad Nauheim

first: Kerstin

last: Troidl

address: Ludwigstr. 43

institute: Max-Planck-Institute for Heart and Lung Research

organism:
Caenorhabditis elegans
Drosophila melanogaster
Danio rerio
Homo sapiens
Mus musculus
Rattus norvegicus

description:
Multi-species miRNA Microarray V2 (#MIRA2-05)
The NCode™ Multi-Species miRNA Microarrays contains probes for the complete Sanger mirBASE 9.0.


title: HiSeq X Ten (Actinidia chinensis)

last: GEO

organism: Actinidia chinensis

technology: high-throughput sequencing

distribution: virtual


title: Agilent-081060 mouse_60k_array

city: Munich

first: Kristian

last: Unger

address: Marchioninistr. 15

department: Department of radiation oncology

institute: LMU University Hospital

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: State Key Laboratory Human LncRNA array 1858 (GPL22868)

city: GZ

first: Rui-qi

last: WANG

state: Guangdong

address: 651 DONGFENG EAST ROAD, GUANGZHOU 510060, P. R. CH

department: state key lab

country: China

institute: SUN YAN-SEN UNIVERSITY CANCER CENTER

manufacturer: State Key Laboratory of Oncology in South China,Sun Yat-sen University

manufacture_protocol: 2412 lncRNA probes were printed onto slides using the SmartArrayerTM 136 printer (CapitalBio,Inc.,Beijing,China)


title: Illumina NextSeq 500 (Isostichopus badionotus)

organism: Isostichopus badionotus


title: miRCURY LNA microRNA Array, 6th generation - hsa, mmu & rno (miRBase 18.0)_ProbeID version

city: Guangzhou

first: Jingsong

last: Ou

state: Please Select

address: 58 Zhong Shan Er Road

department: Surgery/Cardiac Surgery

institute: The First Affiliated Hospital, Sun Yat-sen University

organism:
Homo sapiens
Human alphaherpesvirus 2
Lymphocryptovirus
Rhadinovirus
JC polyomavirus
Human immunodeficiency virus 1
Merkel cell polyomavirus

description:
GalFileCreationDate=2011-12-08 15:09

ArrayContents_DesignedFor=miRBase 16.0
ArrayContents_CurrentNameColumn=miRBase 18.0
ArrayContents_CurrentNameColumnCoverage=Homo sapiens and related vira:67.55%

ProductDate=November 2010
ProductNumber=208400,208401,208402,208420,208421,208422
LotNumberRange=34101-34101

manufacture_protocol: see Exiqon site


title: PacBio RS (Geobacter sulfurreducens)

organism: Geobacter sulfurreducens


title: RPPA CORE 04232018_145  human protein array

city: Minneapolis

first: Carol

last: Lange

state: Minnesota

address: 2231 6th St SE

department: Medicine

institute: University of Minnesota

technology: spotted peptide or protein


title: BGISEQ-500 (Neurospora crassa)

organism: Neurospora crassa


title: Illumina HiSeq 4000 (Meriones unguiculatus)

organism: Meriones unguiculatus


title: Illumina HiSeq 2000 (Geobacter sulfurreducens PCA)

status: Public on Aug 30 2020

organism: Geobacter sulfurreducens PCA


title: Illumina HiSeq 4000 (Chiloscyllium plagiosum)

organism: Chiloscyllium plagiosum


title: Illumina HiSeq 2000 (Brachypodium stacei)

organism: Brachypodium stacei


title: Illumina HiSeq 2000 (Brachypodium hybridum)

organism: Brachypodium hybridum


title: Illumina NextSeq 500 (Ictidomys tridecemlineatus)

status: Public on Aug 29 2020

organism: Ictidomys tridecemlineatus


title: Duke/RG_MM_v4

city: Durham

first: Raluca

last: Gordan

state: NC

address: 101 Science Dr, CIEMAS 2179

department: Center for Genomic and Computational Biology

institute: Duke University

organism: synthetic construct

manufacture_protocol: In situ oligosynthesized array with proprietary synthetic sequences that contain transcription factor binding sites and their 1-base variants.


title: Duke/RG_MM_v3


title: Duke/RG_MM_v5


title: Duke/RG_MM_v2


title: Illumina NovaSeq 6000 (Pseudomonas stutzeri)

status: Public on Aug 28 2020

organism: Stutzerimonas stutzeri


title: HiSeq X Ten (Morus alba)

status: Public on Aug 25 2020

organism: Morus alba


title: SABiosciences TGF-BMP Signaling PCR assay panel

city: Zunyi

first: Nuo-Xin

last: Wang

state: Guizhou

address: 149 Dalian Road

institute: Affiliated Hospital of Zunyi Medical University

organism: Homo sapiens

description:
PCR assay
SABiosciences RT² Profiler panel of PCR assays.


title: 4CMenB antigenic components protein microarray

city: Siena

first: Erika

last: Bartolini

state: Italy

address: Via Fiorentina 1

department: AIMB

country: Italy

institute: GSK Vaccines

organism: Neisseria meningitidis

manufacturer: Molecular biology Lab, AIMB, GSK Vaccines

manufacture_protocol: Purified recombinant protein were diluted at final concentration of 0.5 mg/ul in 40% glycerol and transferred into 384-well microtiterplates. One droplet of 0.2 nL protein solution was deposited per spot on nitrocellulose-coated slides (FAST slides, Schleicher and Schuell) using the non-contact printer Marathon Spotter (Arrayjet, Edinburgh, UK). Printing was performed in a cabinet with controlled humidity and temperature (55-60% and 12 °C respectively), resulting in spots of 90-110 μm in diameter range. Each protein was printed in 8 replicates on each slide. Printed protein microarrays were kept at room temperature for 5 hours, dried under a stream of nitrogen and store a 4°C.


title: Illumina NextSeq 500 (Corynebacterium glutamicum)

status: Public on Aug 23 2020

organism: Corynebacterium glutamicum


title: Illumina NextSeq 500 (Streptococcus sp. A12)

status: Public on Aug 24 2020

organism: Streptococcus sp. A12


title: HiSeq X Ten (Homo)

status: Public on Aug 21 2020

organism: Homo


title: Illumina Novaseq 6000 (Equus asinus)

organism: Equus asinus


title: Illumina MiSeq (Craterostigma plantagineum)

organism: Craterostigma plantagineum


title: Illumina HiSeq 2500 (Salmonella enterica)

organism: Salmonella enterica


title: Illumina HiSeq 2500 (Octopus bimaculoides)

organism: Octopus bimaculoides


title: Illumina HiSeq 2500 (Irpex lacteus)

status: Public on Aug 26 2020

organism: Irpex lacteus


title: Illumina NovaSeq 6000 (Pseudomonas fluorescens)

organism: Pseudomonas fluorescens


title: miRCURY LNA™ Universal RT microRNA PCR, microRNA Ready-to-Use PCR, Human panel I and II V4

status: Public on Aug 27 2020

city: Clamart

first: Sébastien

last: Banzet

address: rue Lt Raoul Batany

country: France

institute: INSERM U1197

description: PCR assay


title: Illumina NovaSeq 6000 (Pseudomonas putida)

organism: Pseudomonas putida


title: Illumina HiSeq 1000 (Fundulus heteroclitus)

status: Public on Aug 19 2020

organism: Fundulus heteroclitus


title: Illumina HiSeq 2500 (Cochliopodium minus)

status: Public on Aug 18 2020

organism: Cochliopodium minus


title: BGISEQ-500 (Capra aegagrus)

status: Public on Aug 17 2020

organism: Capra aegagrus


title: Illumina HiSeq 2500 (Homo sapiens; Toxoplasma gondii)

status: Public on Aug 22 2020

organism:
Toxoplasma gondii
Homo sapiens


title: Illumina NovaSeq 6000 (Oniscidea)

organism: Oniscidea


title: Duke/RG_MM_loop_v4

organism: synthetic construct


title: Illumina NovaSeq 6000 (Mycobacterium marinum)

organism: Mycobacterium marinum


title: Duke/RG_MM_v1

status: Public on Aug 16 2020

organism:
Saccharomyces cerevisiae
Homo sapiens


title: [ADXECv1a520743] Almac Diagnostics Custom Xcel array [Gene.Symbol version]

city: Bethesda

first: GEO

last: admin

state: MD

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

organism: Homo sapiens

manufacture_protocol: This array was a custom array from Almac diagnostics which was later licensed by Affymetrix. Affymetrix has since removed some of the probes that do not give any additional information, namely those that are termed strong, good, bad and ugly.


title: Illumina HiSeq 2000 (Campylobacter jejuni subsp. jejuni CG8421)

status: Public on Aug 14 2020


title: NextSeq 550 (Solanum lycopersicum)

organism: Solanum lycopersicum


title: Ion Torrent PGM (Macaca mulatta)

organism: Macaca mulatta


title: 3D-Gene Human miRNA V22_1.0.0

city: Kamakura

first: Satoshi

last: Kondo

state: Kanagawa

address: Tebiro 6-10-1

department: New Projects Development Division

country: Japan

institute: Toray Industries,Inc.

distribution: commercial

manufacture_protocol: See manufacture's web site


title: Illumina MiSeq (Semliki Forest virus)

organism: Semliki Forest virus


title: Illumina NextSeq 500 (Campylobacter jejuni subsp. jejuni CG8421)


title: Illumina HiSeq 2500 (Leiotrametes sp. BRFM 1775)

status: Public on Aug 13 2020

organism: Cubamyces sp. BRFM 1775


title: Illumina HiSeq 2000 (Pilatotrama ljubarskyi)

organism: Pilatotrama ljubarskyi


title: Illumina NovaSeq 6000 (Dendroctonus valens)

status: Public on Aug 12 2020

organism: Dendroctonus valens


title: NextSeq 550 (Chlorocebus aethiops)

organism: Chlorocebus aethiops


title: Illumina HiSeq 2500 (Trametes elegans)

organism: Trametes elegans


title: Agilent-076611 Calotropis procera Gene Expression 4X180K Custom Array [Probe name version]

status: Public on Aug 10 2020

city: Bangalore

first: Genotypic

last: technology

state: Karnataka

address: 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE

country: India

institute: Genotypic Technology

organism: Calotropis procera

description: Agilent Custom Plant Gene Expression 4X180K Array (AMADID: 076611) designed by Dr. Vineeta Tripathi with the help of Genotypic Technology Private Limited, Bangalore


title: Illumina NovaSeq 6000 (Homo sapiens; Salmonella enterica subsp. enterica serovar Typhimurium)

status: Public on Aug 11 2020

organism:
Homo sapiens
Salmonella enterica subsp. enterica serovar Typhimurium


title: Illumina NovaSeq 6000 (Punica granatum)

organism: Punica granatum


title: Illumina HiSeq 4000 (Setaria viridis)

organism: Setaria viridis


title: NextSeq 550 (Oryctolagus cuniculus)

organism: Oryctolagus cuniculus


title: Illumina HiSeq 4000 (Homo sapiens; synthetic construct)

status: Public on Aug 08 2020

organism:
Homo sapiens
synthetic construct


title: Illumina MiSeq (Rhodotorula toruloides)

organism: Rhodotorula toruloides


title: Illumina HiSeq 1500 (Gorilla gorilla)

status: Public on Aug 07 2020

organism: Gorilla gorilla


title: Illumina HiSeq 3000 (Burkholderia cenocepacia)

organism: Burkholderia cenocepacia


title: Illumina NovaSeq 6000 (Takifugu rubripes)

organism: Takifugu rubripes


title: Illumina HiSeq 1500 (Pongo abelii)

organism: Pongo abelii


title: Illumina NovaSeq 6000 (Phaseolus vulgaris)

organism: Phaseolus vulgaris


title: Illumina NextSeq 500 (Saccharolobus solfataricus P2)

organism: Saccharolobus solfataricus P2


title: Illumina HiSeq 2000 (Bacteroides ovatus)

organism: Bacteroides ovatus


title: Illumina HiScanSQ (Oeceoclades maculata)

status: Public on Aug 06 2020

organism: Oeceoclades maculata


title: DNBSEQ-G50 (Arabidopsis thaliana)

organism: Arabidopsis thaliana


title: Ion Torrent S5 XL (Saccharomyces cerevisiae)

organism: Saccharomyces cerevisiae


title: Illumina HiSeq 1500 (synthetic construct)

organism: synthetic construct


title: HiSeq X Ten (Brucella canis)

status: Public on Aug 05 2020

organism: Brucella canis


title: BGISEQ-500 (Solanum tuberosum subsp. andigenum)

organism: Solanum tuberosum subsp. andigenum


title: Illumina NovaSeq 6000 (Desulfovibrio vulgaris)

organism: Nitratidesulfovibrio vulgaris


title: Illumina HiSeq 4000 (Oikopleura dioica)

organism: Oikopleura dioica


title: Illumina NovaSeq 6000 (Pseudomonas putida KT2440)

organism: Pseudomonas putida KT2440


title: Illumina HiSeq 4000 ([Candida] glabrata)

status: Public on Aug 04 2020

organism: Nakaseomyces glabratus


title: Illumina HiSeq 2000 (Gloeophyllum trabeum)

organism: Gloeophyllum trabeum


title: Illumina MiSeq (Yersinia pseudotuberculosis)

status: Public on Aug 03 2020

organism: Yersinia pseudotuberculosis


title: NextSeq 550 (Dugesia japonica)

organism: Dugesia japonica


title: DNBSeq-G50 (Homo sapiens)

organism: Homo sapiens


title: UNAM Human 35K

city: San Nicolás de los Garza

first: María

middle: Del Rayo

last: Camacho-Corona

state: Nuevo León

address: Av. Universidad S/N, Ciudad Universitaria

department: Facultad de Ciencias Químicas

country: Mexico

institute: Universidad Autónoma de Nuevo León

manufacture_protocol:
1. Human 70-mer oligo library from OPERON Oligo Sets (http://omad.operon.com/) were resuspended to 40M in Micro Spotting solution (Telechem International Inc.).
2. SuperAmine coated slides 25x75 mm (TeleChem International INC) were printed in single copy, and fixed at 80C for 4 hours.
3. For pre-hybridization the slides were re-hydrated with water vapor at 60C, and fixed with two cycles of UV light (1200J).
4. After boiling for two minutes at 92C, slides were washed with 95% ethanol for one minute and prehybridzed in 5X SSC, 0.1% SDS and 1% BSA for one hour at 42C .
5. The slides were washed and dried for further hybridization.
6. Printing geometry: Grid “X” and “Y” coordinates in slide 3.5 and 7 mm, dot spacing “Y” 160 micron, dot spacing “X” 155 micron, number of dots per grid “X” 28 and “Y” 27, distances between grids “X” and “Y” 4.5 mm, number of grids 48.


title: Illumina NextSeq 500 (Ostreococcus tauri)

status: Public on Aug 02 2020

organism: Ostreococcus tauri


title: Illumina HiSeq 4000 (Phaseolus vulgaris)

organism: Phaseolus vulgaris


title: Illumina HiSeq 2500 (Quercus suber)

organism: Quercus suber


title: NanoString nCounter Human v3 miRNA Expression Assay

status: Public on Aug 15 2020

city: Gdańsk

first: Wojciech

last: Biernat

address: Smoluchowskiego 17

department: Department of Pathomorphology

country: Poland

institute: Medical Univeristy of Gdańsk

technology: other


title: Agilent Human Gene Expression 8x60k Array (AMADID: 072363)[Gene Name Version]

status: Public on Aug 01 2020

description: Arrays of this design have barcodes that begin with 16072363 or 2572363.


title: Illumina NovaSeq 6000 (Sorghum bicolor)

organism: Sorghum bicolor


title: GeoChip 5.0 180k_all ORF

city: Columbus

first: Michael

last: Brooker

state: OH

address: 590 Woody Hayes Drive

department: Food, Agricultural, and Biological Engineering

institute: The Ohio State Unviersity

organism: uncultured soil microorganism


title: Illumina NextSeq 500 (Streptomyces coelicolor)

organism: Streptomyces coelicolor


title: BGISEQ-500 (Solanum tuberosum)

organism: Solanum tuberosum


title: DNBSEQ-G400 (Solanum lycopersicum)

organism: Solanum lycopersicum


title: Exiqon miRCURY LNA microRNA Array,7th generation [miRBase v18]

city: Shanghai

first: Zhenlin

last: Huang

state: Shanghai

address: 1200 Cailun Road, Zhangjiang High Tech Park

department: Institute of Chinese Materia Medica

institute: Shanghai University of Traditional Chinese Medicine

organism:
Mus musculus
Murid betaherpesvirus 1
Murid gammaherpesvirus 4

description:
Product=miRCURY LNA microRNA Array, 7th generation - hsa, mmu & rno
ProductDate=March 2012
ProductNumber=208500,208501,208502,208510
LotNumberRange=35105-35105
Organism(s)=Mus musculus, Mouse Murid herpesvirus 1, Mouse Murid herpesvirus 4
GalFileCreationDate=2013-12-19 09:13
ArrayContents_DesignedFor=miRBase 18.0
ArrayContents_CurrentNameColumn=miRBase 20.0
ArrayContents_CurrentNameColumnCoverage=Mus musculus and related vira:60.76%


title: Illumina NextSeq 500 (Rattus rattus)

organism: Rattus rattus


title: DNBSEQ-G400 (Danio rerio)

organism: Danio rerio


title: Agilent-065619 Human miRNA array

city: Nijmegen

first: Ilse

last: Rood

address: PO Box 9101

country: Netherlands

institute: Radboudumc

description:
All human mirBase v20
Arrays of this design have barcodes that begin with 16065619 or 2565619.


title: miRCURY LNA microRNA Array, 6th generation - hsa, mmu & rno (miRBase 18.0)

status: Public on Jul 27 2020

organism:
Homo sapiens
Human alphaherpesvirus 2
Lymphocryptovirus
Rhadinovirus
JC polyomavirus
Human immunodeficiency virus 1
Merkel cell polyomavirus


title: [ADXECv1a520743] Almac Diagnostics Custom Xcel array

status: Public on Dec 31 2017

city: Belfast

first: Wendy

last: Allen

address: 97 Lisburn Road

department: Centre For Cancer Research and Cell Biology

country: United Kingdom

institute: Queen's University Belfast


title: GridION (Homo sapiens)

last: GEO


title: Illumina NovaSeq 6000 (Schizosaccharomyces pombe)

organism: Schizosaccharomyces pombe


title: Illumina NovaSeq 6000 (Mesocricetus auratus)

organism: Mesocricetus auratus