title: NanoString Prognostic Liver Signature (PLS) plus liver fibrosis panel (186-gene PLS + 24-gene extension)

status: Public on Dec 22 2021

city: Dallas

first: Yujin

last: Hoshida

state: TX

address: 5323 Harry Hines Blvd

country: USA

institute: University of Texas Southwestern Medical Center

organism: Homo sapiens

technology: other

distribution: custom-commercial

manufacture_protocol: See manufacturer's website


title: NanoString Prognostic Liver Signature (PLS) plus ELS panel (186-gene PLS + 10-gene extension)

manufacture_protocol: See manufacturer's website.


title: Illumina NovaSeq 6000 (Dichotomyctere nigroviridis)

status: Public on Aug 30 2021

last: GEO

organism: Dichotomyctere nigroviridis

technology: high-throughput sequencing

distribution: virtual


title: Illumina HiSeq 2500 (Streptococcus suis)

status: Public on Aug 29 2021

organism: Streptococcus suis


title: [HuGene-2_1-st] Affymetrix Human Gene 2.1 ST Array [gene name version II]

status: Public on Aug 31 2021

city: Bethesda

first: GEO

last: admin

state: MD

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

technology: in situ oligonucleotide

distribution: commercial

manufacture_protocol: See manufacturer's web site.


title: NanoString nCounter Human SBCLN gene expression custom v1

status: Public on Nov 18 2021

city: Wuhan

first: Wei

last: Zhang

state: Hubei

address: Jiefang Avenue

department: Hematology

country: China

institute: Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology

manufacture_protocol: Oligonucleotide probes tagged with identifiers consisting of a unique sequence of multi-color fluorophores. See manufacturer's website (www.nanostring.com).


title: MGISEQ-2000RS (Danio rerio)

status: Public on Aug 27 2021

organism: Danio rerio


title: MGISEQ-2000RS (Drosophila melanogaster)

organism: Drosophila melanogaster


title: Illumina NextSeq 500 (Aspergillus fumigatus Af293)

status: Public on Aug 26 2021

organism: Aspergillus fumigatus Af293


title: NanoString nCounter Mouse Metabolic Pathways Panel

city: Stockholm

first: Joanna

last: Rorbach

state: Not Applicable (Outside of US and Canada)

address: Solnavägen 9, 9d 171 77 Stockholm, Sweden

department: Department of Medical Biochemistry and Biophysics

country: Sweden

institute: karolinska institute

organism: Mus musculus

description: Karolinska Institutet, KIGene / Genetic analysis / nanoString nCounter® analysis system


title: MinION (Severe acute respiratory syndrome coronavirus 2)


title: AB SOLiD System 3.0 (Phytophthora sojae)

status: Public on Aug 25 2021

organism: Phytophthora sojae


title: AB SOLiD System 3.0 (Glycine max; Phytophthora sojae)

organism:
Glycine max
Phytophthora sojae


title: Illumina HiSeq 2500 (Eriocheir sinensis)

organism: Eriocheir sinensis


title: AB SOLiD System 3.0 (Glycine max)

organism: Glycine max


title: Illumina NovaSeq 6000 (Raphanus sativus)

organism: Raphanus sativus


title: Illumina NovaSeq 6000 (Pan troglodytes)

organism: Pan troglodytes


title: HiSeq X Ten (Ambystoma mexicanum)

organism: Ambystoma mexicanum


title: [miRNA-4] Affymetrix Rat miRNA-4 Array [Brain Array V21]

city: Santa Clara

last: Affymetrix

state: CA

institute: Affymetrix, Inc.

organism: Rattus norvegicus

manufacture_protocol: See manufacturer's web site


title: Illumina HiSeq 2000 (Cicer arietinum; Phytophthora medicaginis)

organism:
Cicer arietinum
Phytophthora medicaginis


title: NanoString nCounter Human PTCL gene expression custom v1

city: Madrid

first: Laura

middle: Jiménez

last: Tomas Roca

state: Madrid

address: Avenue Reyes Catolicos

department: Pathology Department

country: Spain

institute: Research Institute Fundacion Jimenez Diaz


title: Nanostring PanCancer Immune Profiling Panel Customized

city: Zurich

first: Reinhard

last: Dummer

address: Gloriastrasse 31

country: Switzerland

institute: University Hospital of Zurich

manufacture_protocol: See manufacturer's website (www.nanostring.com)


title: DNBSEQ-T7 (Ambystoma mexicanum)


title: Illumina NovaSeq 6000 (Oryza longistaminata)

status: Public on Aug 19 2021

organism: Oryza longistaminata


title: Illumina HiSeq 2000 (Pagiophloeus tsushimanus)

organism: Pagiophloeus tsushimanus


title: BGISEQ-500 (Schistosoma mansoni)

status: Public on Aug 23 2021

organism: Schistosoma mansoni


title: NextSeq 550 (Cannabis sativa)

organism: Cannabis sativa


title: NextSeq 550 (Agrobacterium tumefaciens)

organism: Agrobacterium tumefaciens


title: Illumina HiSeq 2500 (Physcomitrium patens)

status: Public on Aug 14 2021

organism: Physcomitrium patens


title: Illumina HiSeq 2500 (Liberibacter crescens BT-1)

status: Public on Aug 16 2021

organism: Liberibacter crescens BT-1


title: Nanostring AutoImmune Panel

city: Paris

first: Charles

last: Cassius

address: 1 avenue Claude Vellefaux

department: Dermatologie

country: France

institute: Hôpital Saint-Louis

organism: Homo sapiens


title: Illumina NovaSeq 6000 (Takifugu obscurus)

status: Public on Aug 12 2021

organism: Takifugu obscurus


title: nCounter Mouse Immunology Panel [NS_Immunology_Mm_C2269]

status: Public on Aug 20 2021

city: Washington DC

first: Susan

middle: M

last: Knoblach

state: District of Columbia

address: 111 Michigan Ave NW

department: Research Ctr for Genetic Medicine

institute: CNH

organism: Mus musculus

manufacture_protocol: See manufacturer's website (http://www.nanostring.com)


title: Illumina NovaSeq 6000 (Stenotrophomonas maltophilia)

status: Public on Aug 11 2021

organism: Stenotrophomonas maltophilia


title: μParaflo™ human microRNA microarray Assay

city: Shanghai

first: Minfeng

last: Shu

state: State...

address: No.131 Dongan Road II Xuhui district

institute: Fudan University

technology: spotted DNA/cDNA

distribution: non-commercial

manufacture_protocol: standard protocol


title: Illumina NovaSeq 6000 (Vitis vinifera)

status: Public on Aug 15 2021

organism: Vitis vinifera


title: Illumina NextSeq 500 (Ooceraea biroi)

organism: Ooceraea biroi


title: Illumina NovaSeq 6000 (Musca domestica)

organism: Musca domestica


title: Illumina Novaseq 6000 (Halobacterium salinarum)

organism: Halobacterium salinarum


title: HuProt™ v3.2

technology: spotted peptide or protein

manufacture_protocol: A human proteome microarray (HuProtTM v3.2 , CDI Labs, Mayaguez, PR) that contains over 20,000 recombinant human full-length proteins expressed and purified from yeast


title: miRCURY LNA miRNA miRNome PCR Panel

city: Lodz

first: Konrad

last: Stawiski

address: Mazowiecka 15

department: Department of Biostatistics and Translational Medicine

country: Poland

institute: Medical University of Lodz

technology: RT-PCR

description: PCR assay


title: NextSeq 2000 (Escherichia coli K-12)

organism: Escherichia coli K-12


title: NextSeq 550 (Filifactor alocis)

organism: Filifactor alocis


title: Agilent_human_DiscoverPrint_15746

status: Public on Aug 24 2021

city: Novato

first: Christina

last: Yau

address: 8001 Redwood Blvd

institute: Buck Institute of Age Research

manufacture_protocol: Microarrays were prepared by Agilent technologies using their Agilent SurePrint Technology. Breifly, 60-mer oligonucleotides are synthesized base-by-base in repetitive print layers on a solid glass substrate, using standard phosphoramidite chemistry.


title: Illumina NextSeq 500 (Clostridium tetani)

organism: Clostridium tetani


title: Illumina NovaSeq 6000 (Paracoccus denitrificans)

status: Public on Aug 09 2021

organism: Paracoccus denitrificans


title: NextSeq 550 (Oryza sativa Japonica Group)

status: Public on Aug 10 2021

organism: Oryza sativa Japonica Group


title: NextSeq 550 (Sideroxydans lithotrophicus)

organism: Sideroxydans lithotrophicus


title: HiSeq X Ten (Physcomitrium patens)


title: Illumina HiSeq 2000 (Moschus berezovskii)

status: Public on Aug 13 2021

organism: Moschus berezovskii


title: Oligodendrocyte marker -custom panel baboon

status: Public on Aug 08 2021

city: San Antonio

first: Elizabeth

last: Gould

state: Texas

address: 7703 Floyd Curl Dr

institute: University of Texas Health Science Center San Antonio

organism: Papio anubis

description: Evaluate target genes for oligodendrocytes


title: Illumina HiSeq 2500 (Cuscuta campestris)

status: Public on Aug 06 2021

organism: Cuscuta campestris


title: Illumina HiSeq 2500 (Phelipanche aegyptiaca)

organism: Phelipanche aegyptiaca


title: Oligodendrocyte marker -custom panel mouse2


title: Illumina HiSeq 2500 (Acinetobacter baylyi; Escherichia coli; Pseudomonas putida)

organism:
Pseudomonas putida
Escherichia coli
Acinetobacter baylyi


title: DNBSEQ-T7 (Gallus gallus)

organism: Gallus gallus


title: Illumina novaseq 6000 (Mus musculus)

organism: Mus musculus


title: Illumina HiSeq 2000 (Daucus carota)

organism: Daucus carota


title: HiSeq X Ten (Eisenia andrei)

status: Public on Aug 05 2021

organism: Eisenia andrei


title: DNBSEQ-T7 (Eisenia andrei)


title: Illumina HiSeq 4000 (Nannospalax ehrenbergi)

status: Public on Aug 03 2021

organism: Nannospalax ehrenbergi


title: Illumina NovaSeq 6000 (Papio anubis)


title: Illumina NovaSeq 6000 (Nannospalax ehrenbergi)


title: NextSeq 550 (Bigelowiella natans)

organism: Bigelowiella natans


title: Agilent-024691 Rat Genome CGH Microarray [probe name version]

status: Public on Aug 01 2021

city: Chiba

first: Kazuhiro

last: DAINO

address: 4-9-1 Anagawa, Inage-ku

country: Japan

institute: National Institutes for Quantum and Radiological Science and Technology

organism: Rattus norvegicus

description: Arrays of this design have barcodes that begin with 16024691 or 2524691.

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Illumina HiSeq 2500 (Trichoderma virens)

organism: Trichoderma virens


title: Agilent-040989 Human lncRNA 4*180K microarray [Probe Name version]

first: Xiao

last: Liu

state: Shanghai

address: 12 Middle Wulumuqi Road

institute: Huashan Hospital, Fudan University

organism: Homo sapiens

manufacture_protocol: See manufacturer's web site at http://www.agilent.com


title: Oligodendrocyte marker -custom panel mouse1


title: Agilent-040989 Human lncRNA 4*180K microarray


title: HiSeq X Ten (Bos grunniens)

organism: Bos grunniens


title: Illumina NextSeq 500 (Streptomyces scabiei)

status: Public on Aug 04 2021

organism: Streptomyces scabiei


title: Illumina HiSeq 4000 (Levilactobacillus brevis)

organism: Levilactobacillus brevis


title: MGISEQ-2000RS (Arabidopsis thaliana)

status: Public on Aug 02 2021

organism: Arabidopsis thaliana


title: Illumina HiSeq 2500 ([Candida] glabrata CBS 138)

status: Public on Aug 19 2021

organism: Nakaseomyces glabratus CBS 138


title: NextSeq 550 (Bordetella hinzii)

organism: Bordetella hinzii


title: Agilent_human_DiscoverPrint_15746

status: Public on Dec 05 2013

city: Amsterdam

first: Paul

last: Roepman

address: Science Park 406

country: Netherlands

institute: Agendia


title: HiSeq X Ten (Pseudomonas fluorescens)

organism: Pseudomonas fluorescens


title: Agilent custom Rice Gene Expression  8x60k Array designed by Genotypic Technology Private Limited  AMADID: 047691

status: Public on Aug 12 2021

city: Bangalore

first: Vidya

last: Niranjan

address: Mysuru Road, Kengeri

country: India

institute: R V College of Engineering

organism: Oryza sativa


title: Illumina HorvathMammalianMethylChip40 BeadChip

status: Public on Jul 02 2020

city: Los Angeles

first: Steve

last: Horvath

address: 695 Charles E. Young Drive South, Box 708822

department: Human Genetics

institute: University of California, Los Angeles

organism:
Homo sapiens
Mus musculus
Rattus norvegicus

technology: oligonucleotide beads

description:
Developed in the labs of Steve Horvath and Jason Ernst. The mammalian array platform applies to ALL mammals (humans, mouse, rat, sheep, horses, pigs, etc.).
The array design is similar to the Illumina Infinium 450K array but it contains fewer up to 37492 CpGs.
Additional material can be found on the Github page https://github.com/shorvath/MammalianMethylationConsortium/
A vignette on using the mammal methylation array with SeSAMe is available from https://bioconductor.org/packages/release/bioc/vignettes/sesame/inst/doc/mammal.html.

first: Jason

last: Ernst

first: Adriana

last: Arneson