title: Agilent-067406 CBC lncRNA + mRNA microarray (lncRNA version)

status: Public on Dec 23 2021

city: Xi'an

first: Jingjing

last: Ma

address: No. 127 Changlexi Road

country: China

institute: Fourth Military Medical University

organism: Homo sapiens

technology: in situ oligonucleotide

distribution: custom-commercial

manufacture_protocol: See manufacturer's website.


title: Agilent-072363 Human Gene Expression 8x60k Array [EntrezGenesID level]

status: Public on May 09 2022

city: Kyoto

first: Mio

last: Iwasaki

address: 53 Kawahara-cho, Shogoin, Sakyo-ku

department: Center for iPS Cell Research and Application

country: Japan

institute: Kyoto University

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Illumina NovaSeq 6000 (Gossypium barbadense)

status: Public on Sep 28 2021

last: GEO

country: USA

organism: Gossypium barbadense

technology: high-throughput sequencing

distribution: virtual


title: Illumina NovaSeq 6000 (Apeltes quadracus)

status: Public on Sep 27 2021

organism: Apeltes quadracus


title: Illumina HiSeq 2500 (Aeromonas sp. H1)

organism: Aeromonas sp. H1


title: Agilent-077092 bs0603_094c [Probe name version]

status: Public on Sep 22 2021

city: Tsukuba

first: Nobutaka

last: Mitsuda

state: Ibaraki

address: Central 6 Higashi 1-1-1

department: Bioproduction Research Institute

institute: National Institute of Advanced Industrial Science and Technology

organism: Hevea brasiliensis

description: Arrays of this design have barcodes that begin with 16077092 or 2577092.


title: Illumina HiSeq 2500 (Dermacentor silvarum)

organism: Dermacentor silvarum


title: Illumina NovaSeq 6000 (Gasterosteus aculeatus)

organism: Gasterosteus aculeatus


title: Illumina HiSeq 2500 (other sequences)

organism: other sequences


title: MinION (Xylella fastidiosa subsp. fastidiosa)

organism: Xylella fastidiosa subsp. fastidiosa


title: [ADXBRCv2a520413] Affymetrix Human Custom Array

status: Public on Sep 30 2021

city: Belfast

first: Stuart

last: McIntosh

address: 97 Lisburn Road

country: United Kingdom

institute: Queen's University Belfast

manufacture_protocol: see manufacturer's web site


title: Illumina NovaSeq 6000 (Vibrio anguillarum)

organism: Vibrio anguillarum


title: nCounter PanCancer Progression panel [NS_CancerProg_C4972]

status: Public on Sep 23 2021

city: Tucson

first: Georg

middle: Thomas

last: Wondrak

state: Arizona

address: UA Cancer Center, 1515 N Campbell Ave, Room 3971

department: Pharm/Tox

institute: University of Arizona

technology: other

manufacture_protocol: NanoString nCounter gene expression assay protocol was followed (https://www.nanostring.com/wp-content/uploads/2021/03/MAN-10056-05-Gene-Expression-Hybridization-Protocol.pdf).


title: Illumina HiSeq 4000 (Aspergillus nidulans)

organism: Aspergillus nidulans


title: Illumina NovaSeq 6000 (Lytechinus variegatus)

status: Public on Sep 21 2021

organism: Lytechinus variegatus


title: Illumina NovaSeq 6000 (Chromochloris zofingiensis)

status: Public on Sep 24 2021

organism: Chromochloris zofingiensis


title: Sequel II (Caulobacter vibrioides)

status: Public on Sep 20 2021

organism: Caulobacter vibrioides


title: Illumina NovaSeq 6000 (Klebsiella pneumoniae subsp. pneumoniae; Mus musculus)

organism:
Mus musculus
Klebsiella pneumoniae subsp. pneumoniae


title: Illumina NovaSeq 6000 (Geobacter sulfurreducens PCA)

organism: Geobacter sulfurreducens PCA


title: Illumina HiSeq 4000 (Rhizobium etli)

organism: Rhizobium etli


title: HiSeq X Ten (Morone chrysops)

organism: Morone chrysops


title: HiSeq X Ten (Trametes gibbosa)

organism: Trametes gibbosa


title: Illumina HiSeq 2000 (Corynebacterium glutamicum ATCC 13032)

status: Public on Sep 19 2021

organism: Corynebacterium glutamicum ATCC 13032


title: Illumina NextSeq 500 (mixed culture metagenome)

status: Public on Sep 17 2021

organism: mixed culture metagenome


title: Illumina NextSeq 500 (Oxytricha trifallax)

organism: Oxytricha trifallax


title: Illumina MiSeq (Streptomyces coelicolor A3(2))

status: Public on Sep 18 2021

organism: Streptomyces coelicolor A3(2)


title: BGISEQ-500 (Hippocampus)

organism: Hippocampus


title: DNBSEQ-G400 (Medicago truncatula)

organism: Medicago truncatula


title: Illumina NovaSeq 6000 (Trypanosoma evansi)

status: Public on Sep 16 2021

organism: Trypanosoma evansi


title: Illumina HiSeq 4000 (Camelina sativa)

organism: Camelina sativa


title: Illumina NextSeq 500 (Helicobacter pylori)

organism: Helicobacter pylori


title: Illumina NovaSeq 6000 (Streptomyces coelicolor A3(2))


title: Illumina NovaSeq 6000 (Trypanosoma equiperdum)

organism: Trypanosoma equiperdum


title: Illumina NovaSeq 6000 (Klebsiella pneumoniae subsp. pneumoniae)

organism: Klebsiella pneumoniae subsp. pneumoniae


title: Illumina MiSeq (Vibrio natriegens)

status: Public on Sep 15 2021

organism: Vibrio natriegens


title: Illumina MiSeq (Neisseria musculi)

organism: Neisseria musculi


title: Illumina NextSeq 500 (Bombyx mori)

organism: Bombyx mori


title: Illumina NovaSeq 6000 (Owenia fusiformis)

status: Public on Sep 14 2021

organism: Owenia fusiformis


title: NextSeq 550 (Staphylococcus aureus subsp. aureus USA300)


title: Illumina NextSeq 500 (Homo sapiens; Vibrio cholerae O1 biovar El Tor)

organism:
Vibrio cholerae O1 biovar El Tor
Homo sapiens


title: Illumina NovaSeq 6000 (Dendrobium catenatum)

organism: Dendrobium catenatum


title: Illumina NovaSeq 6000 (Ustilago maydis)

status: Public on Sep 13 2021

organism: Mycosarcoma maydis


title: Illumina NovaSeq 6000 (Enterococcus faecalis OG1RF)

organism: Enterococcus faecalis OG1RF


title: MGISEQ-2000RS (Oryza sativa Japonica Group)

status: Public on Sep 11 2021

organism: Oryza sativa Japonica Group


title: Illumina HiSeq 2000 (Thermothelomyces thermophilus ATCC 42464)


title: NextSeq 2000 (Salmonella enterica subsp. enterica serovar Typhimurium)


title: Illumina HiSeq 3000 (Populus nigra)

status: Public on Sep 09 2021

organism: Populus nigra


title: Illumina NovaSeq 6000 (Rousettus aegyptiacus)

status: Public on Sep 10 2021

organism: Rousettus aegyptiacus


title: Illumina HiSeq 4000 (Ixodes scapularis)

organism: Ixodes scapularis


title: Illumina NovaSeq 6000 (Escherichia coli BL21(DE3))

organism: Escherichia coli BL21(DE3)


title: Illumina NovaSeq 6000 (Pardosa milvina)

status: Public on Sep 08 2021

organism: Pardosa milvina


title: Illumina NextSeq 500 (Vibrio cholerae O1 biovar El Tor)

organism: Vibrio cholerae O1 biovar El Tor


title: Illumina HiSeq 2500 (Armillaria mellea; Entoloma abortivum)

organism:
Armillaria mellea
Entoloma abortivum


title: Agilent-070155 Mouse miRNA Microarray (Probe Name version)

city: Bethesda

first: GEO

last: admin

state: MD

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

organism: Mus musculus

description: Catalog miRNA expression microarray for mouse, 8x60K

distribution: commercial

relation: Alternative to: GPL22383 (Feature Extraction Number version)


title: Illumina Infinium HumanMethylationEPIC BeadChip + immuno custom content

city: Aurora

first: Ivana

last: Yang

state: CO

institute: University of Colorado - Anschutz Medical Campus

organism: Homo sapiens

manufacture_protocol: See manufacturer's website


title: Illumina HiSeq 4000 (Pelodiscus sinensis)

organism: Pelodiscus sinensis


title: NextSeq 2000 (Schizosaccharomyces pombe)

organism: Schizosaccharomyces pombe


title: Illumina NovaSeq 6000 (Comamonas testosteroni)

organism: Comamonas testosteroni


title: Illumina HiSeq 2500 (Entoloma abortivum)

organism: Entoloma abortivum


title: Illumina HiSeq 4000 (Cicer arietinum; Phytophthora medicaginis)

status: Public on Sep 07 2021

organism:
Cicer arietinum
Phytophthora medicaginis


title: Illumina HiSeq 3000 (Shigella flexneri)

status: Public on Sep 06 2021

organism: Shigella flexneri


title: Illumina HiSeq 4000 (Columba livia)

organism: Columba livia


title: Illumina NovaSeq 6000 (Citrus reticulata)

organism: Citrus reticulata


title: Illumina HiSeq 2500 (Armillaria mellea)

organism: Armillaria mellea


title: Illumina HiSeq 2000 (Pseudoalteromonas sp. GCY)

organism: Pseudoalteromonas sp. GCY


title: Illumina HiSeq 2500 (Influenza A virus (A/WSN/1933(H1N1)))

status: Public on Sep 04 2021

organism: Influenza A virus (A/WSN/1933(H1N1))


title: Illumina HiSeq 4000 (Influenza A virus (A/WSN/1933(H1N1)))


title: Agilent-085203 human

city: China

first: Liu

last: longbin

state: Zhejiang province

address: 568 Zhongxing N Rd, Yuecheng District, Shaoxing, Zhejiang, China575 Pingjiang Rd, Yuecheng District, Shaoxing, Zhejiang, China

institute: Affiliated Hospital of Shaoxing University

manufacture_protocol: see manufacturer's website


title: nanoString nCounter Mouse Metabolism Panel [NS_Mm_Metabolism_v1.0]

status: Public on Sep 05 2021

city: Riverside

first: Dr Manuela

last: Martins-Green

state: California

address: 900 University Ave

department: Molecular Cell and Systems Biology

institute: University of California


title: Illumina HiSeq 4000 (Sinapis alba)

status: Public on Sep 03 2021

organism: Sinapis alba


title: Illumina NextSeq 500 (Thermothelomyces thermophilus)

organism: Thermothelomyces thermophilus


title: Illumina NovaSeq 6000 (Thermothelomyces thermophilus)


title: Illumina HiSeq 2500 (Panicum sumatrense)

status: Public on Sep 02 2021

organism: Panicum sumatrense


title: BGISEQ-500 (Mesocricetus auratus)

organism: Mesocricetus auratus


title: BGISEQ-500 (Cervus nippon taiouanus)

organism: Cervus nippon taiouanus


title: BGISEQ-500 (Felis catus)

organism: Felis catus


title: BGISEQ-500 (Anolis carolinensis)

organism: Anolis carolinensis


title: BGISEQ-500 (Manis javanica)

organism: Manis javanica


title: BGISEQ-500 (Panthera tigris altaica)

organism: Panthera tigris altaica


title: Qiagen Human Custom miScript miRNA PCR Array

status: Public on Jan 13 2021

city: Shenyang

first: Liping

last: Shan

state: Liaoning

address: 36 Sanhao street

institute: Shenjing hospital of China Medical University

organism: Homo sapiens

technology: RT-PCR


title: Nanostring GeoMx Digital Spatial Profiling (DSP) Platform

city: New York

first: Robert

last: Sebra

state: NY

address: One Gustave L. Levy Place

department: Genetics and Genomic Sciences

institute: Icahn School of Medicine at Mount Sinai

description:
Cancer Transcriptome Atlas Panel targets are defined in Alpha_CTA_V2.0.pkc
27 additional Covid targets are defined in GeoMx_COVID19_V1.0.pkc. The targets are: ACE2, AQP5, CC2D1B, DHX58, FURIN, HAS2, HOPX, IFNLR1, IL10RB, MUC13, MUC2, MUC5AC, MUC5B, NAPSA, ORF1ab, ORF1ab_REV, PGC, S, SARS-CoV-2 Neg (spike-in negative control), SCGB1A1, SF3A3, SFTPA1, SFTPB, SFTPC, SFTPD, TP63


title: Illumina HiSeq 2500 (Glossina fuscipes fuscipes)

status: Public on Sep 01 2021

organism: Glossina fuscipes fuscipes


title: BGISEQ-500 (Anas platyrhynchos)

organism: Anas platyrhynchos


title: Agilent-085630 Oebiotech Human Microarray V7

city: Suzhou

first: Wan-liang

last: Guo

address: 92 Zhongnan Street

institute: Children's Hospital of Soochow University

description:
Arrays of this design have barcodes that begin with 16085630 or 2585630.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: NanoString custom mouse

city: Nashville

first: John

last: Wilson

state: TN

address: 2400 Highland Ave., 107 Olin Hall

institute: Vanderbilt University

organism: Mus musculus

description: NanoString RNA Analysis


title: [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array

status: Public on Aug 31 2021

first: Rajesh

last: Agarwal

state: Colorado

address: 12850 E Montview Blvd

department: Pharmaceutical Sciences

institute: University of Colorado Anschutz Medical Campus

manufacture_protocol: Affymetrix


title: Agilent-070155 Mouse miRNA Microarray (Feature Extraction Number version)

status: Public on Aug 29 2016

relation: Alternative to: GPL21265 (miRNA ID version)

relation: Alternative to: GPL30615 (Probe Name version)


title: NextSeq 2000 (Danio rerio)

organism: Danio rerio


title: Agilent-084139 Egranulosus_baochong

status: Public on Sep 29 2021

city: Urumqi

first: Limei

last: Wen

address: No. 137 Liyushan South Road, Pharmaceutical Department

institute: The First Affiliated Hospital of Xinjiang Medical University

organism: Echinococcus granulosus

description:
CDS

Arrays of this design have barcodes that begin with 16084139 or 2584139.


title: LC_MRA-1003_miRRat_21

status: Public on Sep 30 2021

city: San Bartolomeo in Galdo

first: Antonio

last: Vinciguerra

state: Benevento

address: via Pasquale Circelli 130

country: Italy

institute: Università Politecnica delle Marche

organism: Rattus norvegicus

manufacture_protocol: Based on Sanger miRBase Release 21