title: nCounter mouse miRNA code set (based on miRBase v15, 620 probes)

status: Public on Jul 31 2022

city: Toronto

first: Denise

middle: D

last: Belsham

state: ON

address: 1 Kings College Circle MSB3346

department: Physiology

country: Canada

institute: University of Toronto

organism: Mus musculus

technology: other

distribution: custom-commercial


title: BGISEQ-500 (Penicillium expansum)

status: Public on Jul 28 2022

last: GEO

country: USA

organism: Penicillium expansum

technology: high-throughput sequencing

distribution: virtual


title: BGISEQ-500 (Penicillium polonicum)

organism: Penicillium polonicum


title: Illumina HiSeq 4000 (Listeria monocytogenes)

status: Public on Jul 29 2022

organism: Listeria monocytogenes


title: NanoString nCounter Elements Ovine ARDS model Custom Multiplex Assay

status: Public on Jul 27 2022

city: Brisbane

first: Kieran

last: Hyslop

state: Queensland

address: Lvl 3, Clinical Sciences Building 627 Rode Road CHERMSIDE

department: Faculty of Medicine

country: Australia

institute: University of Queensland

organism: Ovis aries

manufacture_protocol: nCounter Elements XT user manual EX-US (https://nanostring.com/products/ncounter-assays-panels/ncounter-custom-solutions/elements-tagsets/)


title: Illumina NextSeq 500 (Streptococcus mutans; Streptococcus oralis)

organism:
Streptococcus oralis
Streptococcus mutans


title: Illumina NextSeq 500 (Streptococcus gordonii; Streptococcus mutans; Streptococcus oralis; Streptococcus sanguinis)

organism:
Streptococcus gordonii
Streptococcus oralis
Streptococcus sanguinis
Streptococcus mutans


title: MinION (Plasmodium falciparum)

organism: Plasmodium falciparum


title: KRIBB Hansenula 6K array

city: Seoul

first: Hye Yun

last: Moon

state: Seoul

address: , 221 Heukseok-dong, Dongjak-gu

department: Department of Life Science

country: South Korea

institute: Chung-Ang university

organism: Ogataea angusta

technology: spotted DNA/cDNA

distribution: non-commercial

manufacture_protocol: DNA spotted onto aldehyde-coated glass microscope slides


title: Illumina NovaSeq 6000 (Thermofilum adornatum)

organism: Thermofilum adornatum


title: DNBSEQ-T7 (Drosophila melanogaster)

organism: Drosophila melanogaster


title: Agilent-084868 Llactis_IL594_v2 [Probe Name version]

city: Warszawa

first: Marek

last: Skoneczny

email: kicia@ibb.waw.pl, mrksknc@gmail.com

address: Pawińskiego 5A

country: Poland

institute: Institute of Biochemistry and Biophysics PAS

organism: Lactococcus lactis

technology: in situ oligonucleotide

description:
as v1 with one pseudogen added

Arrays of this design have barcodes that begin with 16084868 or 2584868.

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Illumina HiSeq 4000 (Disocactus eichlamii)

status: Public on Jul 26 2022

organism: Disocactus eichlamii


title: Illumina HiSeq 4000 (Homo sapiens; Plasmodium vivax)

organism:
Plasmodium vivax
Homo sapiens


title: Applied Biosystems dcRT-MLPA assay (Human)

city: Tehran

first: Fariborz

last: Bahrami

address: 69 Pasteur Ave.

department: Immunology

country: Iran

institute: Pasteur Institute of Iran

organism: Homo sapiens

technology: RT-PCR

description:
dual-color reverse-transcription multiplex ligation-dependent probe amplification (dcRT-MLPA)
dcRT-MLPA approach (a multiplex RT-PCR platform)


title: Illumina NextSeq 500 (Mus musculus musculus x Mus musculus castaneus)


title: NanoString nCounter Custom Panel

first: Chansub

last: Lee

address: 101, Daehak-ro, Jongno-gu

institute: Seoul National University Hospital


title: Illumina NextSeq 500 (Streptococcus oralis)

organism: Streptococcus oralis


title: FZ_IBG1_4plex_086337_all

status: Public on Jul 22 2022

city: Juelich

first: Tino

last: Polen

state: NRW

address: Wilhelm-Johnen-Str 1

department: IBG-1: Biotechnology

country: Germany

institute: Forschungszentrum Jülich GmbH

organism:
Corynebacterium glutamicum
Pseudomonas putida KT2440
Bacillus subtilis subsp. subtilis str. 168
Gluconobacter oxydans 621H
Escherichia coli str. K-12 substr. MG1655

technology: spotted oligonucleotide

description: synthesized 60mer oligonucleotides

manufacturer: Agilent Technologies (Waldbronn, Germany)

manufacture_protocol: see Agilent Technologies


title: Illumina NextSeq 500 (Streptococcus sanguinis)

organism: Streptococcus sanguinis


title: Nanostring codeset Mouse Immune Exhaustion Panel [Gene name version]

status: Public on Aug 24 2022

city: Bellinzona

first: Luciano

last: Cascione

state: Ticino

address: Via Chiesa 5

department: Lymphoma & Genomics Research Program

country: Switzerland

institute: IOR

organism: Mus musculus

manufacture_protocol: See manufacturer's website (http://www.nanostring.com)


title: Illumina NovaSeq 6000 (Laguncularia racemosa)

status: Public on Jul 20 2022

organism: Laguncularia racemosa


title: DNBSEQ-G400 (Fragaria vesca)

status: Public on Jul 19 2022

organism: Fragaria vesca


title: Illumina NextSeq 500 (Streptococcus mutans; Streptococcus sanguinis)

organism:
Streptococcus sanguinis
Streptococcus mutans


title: Illumina HiSeq 4000 (Lytechinus variegatus)

organism: Lytechinus variegatus


title: Illumina HiSeq 2500 (Bos grunniens x Bos taurus)

organism: Bos grunniens x Bos taurus


title: Ion Torrent Proton (Amorphotheca resinae)

status: Public on Jul 18 2022

organism: Amorphotheca resinae


title: Agilent Custom Bifidobacterium_adolescentis_ATCC15703  8x15k GE Array (AMADID: 866021)

city: Mysuru

first: Mukesh

last: Kapoor

state: Karnataka

address: CFTRI

department: Protein Chemistry and Technology

country: India

institute: CSIR-Central Food Technological Research Institute

organism: Bifidobacterium adolescentis ATCC 15703


title: nCounter Human miRNA Assay

status: Public on Jul 23 2022

city: Philadelphia

first: Mariana

last: Franco Fragoso

state: PA

address: 333 Cottman Avenue

department: Cancer Prevention and Control

institute: Fox Chase Cancer Center

distribution: commercial

manufacture_protocol: see manufacturer website


title: MGISEQ-2000RS (Fragaria vesca)


title: uParaflo Microfluidic Biochip miRNA microarray

city: Dallas

first: harini

last: ramalingam

state: Texas

address: 5323 Harry Hines Boulevard

department: IMN

institute: UTSW

manufacture_protocol: see manufacturer's webiste


title: NanoString nCounter Human PanCancer IO 360 Panel

status: Public on Jul 15 2022

city: Houston

first: Pavel

last: Sumazin

state: TX

address: 1102 Bates St

department: Pediatric

institute: Baylor College of Medicine

manufacture_protocol: See manufacturer's website (www.nanostring.com).


title: Illumina NovaSeq 6000 (Homo sapiens; synthetic HIV-1)

organism:
Homo sapiens
synthetic HIV-1


title: Illumina HiSeq 3000 (phytoplankton metagenome)

organism: phytoplankton metagenome


title: Illumina HiSeq 4000 (Disocactus speciosus subsp. speciosus)

organism: Disocactus speciosus subsp. speciosus


title: Illumina HiSeq 3000 (Streptococcus sanguinis SK36)

status: Public on Jul 25 2022

organism: Streptococcus sanguinis SK36


title: Illumina NextSeq 500 (Mariniflexile fucanivorans)

organism: Mariniflexile fucanivorans


title: Qiagen-Operon oligo microarray

status: Public on Jul 13 2022

city: Cincinnati

first: Mario

last: Medvedovic

state: OH

address: 3223 Eden Av. ML 56

department: Department of Environmental Health

institute: University of Cincinnati

manufacture_protocol: not provided


title: Sequel (Enterobacter roggenkampii)

organism: Enterobacter roggenkampii


title: Illumina HiSeq 4000 (Abies pinsapo)

status: Public on Jul 12 2022

organism: Abies pinsapo


title: Illumina NovaSeq 6000 (Lithobates clamitans)

organism: Lithobates clamitans


title: Illumina NovaSeq 6000 (Dipsacus asperoides)

organism: Dipsacus asperoides


title: Sequel (Enterobacter cloacae)

organism: Enterobacter cloacae


title: NextSeq 1000 (Saccharomyces cerevisiae)

organism: Saccharomyces cerevisiae


title: HiSeq X Ten (Cryptococcus neoformans)

organism: Cryptococcus neoformans


title: Illumina iSeq 100 (synthetic construct)

status: Public on Jul 14 2022

organism: synthetic construct


title: Illumina HiSeq 4000 (Citrus aurantiifolia)

organism: Citrus x aurantiifolia


title: Illumina HiSeq 2500 (Fusarium solani)

organism: Fusarium solani


title: Illumina HiSeq 2500 (Homo sapiens/Mus musculus xenograft)

status: Public on Jul 11 2022

organism: Homo sapiens/Mus musculus xenograft


title: Illumina NextSeq 500 (Staphylococcus aureus subsp. aureus RN4220)


title: NanoString nCounter Human v3 miRNA Assay (NS_H_miR_v3a)

city: Columbus

first: William

middle: E.

last: Carson III

institute: The Ohio State University

organism: Homo sapiens

manufacture_protocol: See manufacturer's website (www.nanostring.com)


title: Illumina HiSeq 2500 (Hepatitis B virus)

organism: Hepatitis B virus


title: NextSeq 2000 (Trypanosoma brucei brucei)

organism: Trypanosoma brucei brucei


title: Illumina HiSeq 2500 (Nostoc sp. MG11)

status: Public on Jul 09 2022

organism: Nostoc sp. MG11


title: Illumina NextSeq 500 (Ceratopteris richardii)

status: Public on Jul 10 2022

organism: Ceratopteris richardii


title: NanoString nCounter mouse inflammation v2 panel

city: Stanford

first: Meena

last: Easwaran

state: California

address: 240 Pasteur Dr, BMI 1400

institute: Stanford University

organism: Mus musculus

manufacture_protocol: Refer to manufacturer's website (https://nanostring.com/products/ncounter-assays-panels/immunology/inflammation/)


title: µParaflo®Microfluidic Biochip miRNA microarray.

city: Xi'an

first: Ying

last: Chang

address: Xianning West Road

country: China

institute: Xi'an Jiaotong University


title: Illumina NovaSeq 6000 (Yarrowia lipolytica)

organism: Yarrowia lipolytica


title: Illumina HiSeq 4000 (Eucalyptus urophylla)

organism: Eucalyptus urophylla


title: DNBSEQ-G400 (Mus)

organism: Mus


title: Agilent-085265 1mGyO  G4125A

city: Rokkasho-mura,Kamikita-gun,

first: Keiji

last: OGURA

state: Aomori

address: Takahoko, Hacchasawa,

department: Department of Radiobiology

country: Japan

institute: Institute for Environmental Science

description:
Arrays of this design have barcodes that begin with 16085265 or 2585265

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Illumina NovaSeq 6000 (Linum usitatissimum)

last: GEO

organism: Linum usitatissimum


title: Illumina HiSeq 2500 (Ptychodera flava)

organism: Ptychodera flava


title: Agilent-085263 1mGyM  G4125A

description:
Arrays of this design have barcodes that begin with 16085263 or 2585263

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-085264 1mGyN  G4125A

description:
Arrays of this design have barcodes that begin with 16085264 or 2585264

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-085262 1mGyL  G4125A

description:
Arrays of this design have barcodes that begin with 16085262 or 2585262

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-085261 1mGyK  G4125A

description:
Arrays of this design have barcodes that begin with 16085261 or 2585261

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-073731 1mGyF  G4125A

description:
Arrays of this design have barcodes that begin with 16073731 or 2573731

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-071277 1mGyD  G4125A

description:
Arrays of this design have barcodes that begin with 16071277 or 2571277

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-074149 1mGyG  G4125A

description:
Arrays of this design have barcodes that begin with 16074149 or 2574149

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-082382 1mGyI  G4125A

description:
Arrays of this design have barcodes that begin with 16082382 or 2582382

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-071279 1mGyE  G4125A

description:
Arrays of this design have barcodes that begin with 16071279 or 2571279

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-082381 1mGyH  G4125A

description:
Arrays of this design have barcodes that begin with 16082381 or 2582381

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-066748 1mGyB  G4125A

description:
Arrays of this design have barcodes that begin with 16066748 or 2566748

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-071278 1mGyC  G4125A

description:
Arrays of this design have barcodes that begin with 16071278 or 2571278

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-086412 0.05mGyO  G4125A

description:
Arrays of this design have barcodes that begin with 16086412 or 2586412

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-066746 1mGyA  G4125A

description:
Arrays of this design have barcodes that begin with 16066746 or 2566746

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-086352 0.05mGyM  G4125A

description:
Arrays of this design have barcodes that begin with 16086352 or 2586352

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-086351 0.05mGyL  G4125A

description:
Arrays of this design have barcodes that begin with 16086351 or 2586351

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-040192 0.05mGyA

description:
Arrays of this design have barcodes that begin with 16040192 or 2540192.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-041259 0.05mGyB

description:
Arrays of this design have barcodes that begin with 16041259 or 2541259.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-042594 0.05mGyG

description:
Arrays of this design have barcodes that begin with 16042594 or 2542594.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-040374 0.05mGyC

description:
Arrays of this design have barcodes that begin with 16040374 or 2540374.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-041398 0.05mGyD

description:
Arrays of this design have barcodes that begin with 16041398 or 2541398.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-042339 0.05mGyF

description:
Arrays of this design have barcodes that begin with 16042339 or 2542339.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-086283 0.05K  G4125A

description:
Arrays of this design have barcodes that begin with 16086283 or 2586283

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-042338 0.05mGyE

description:
Arrays of this design have barcodes that begin with 16042338 or 2542338.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-086280 0.05H  G4125A

description:
Arrays of this design have barcodes that begin with 16086280 or 2586280

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent Arabidopsis thaliana 8x60 Gene Expression Microarray: AMADID: 32721

status: Public on Jul 06 2022

city: Bangalore

first: Genotypic

last: technology

address: 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE

institute: Genotypic Technology

organism: Arabidopsis thaliana


title: Agilent-086282 0.05J  G4125A

description:
Arrays of this design have barcodes that begin with 16086282 or 2586282

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-084559 1mGyJ  G4126A

description:
Arrays of this design have barcodes that begin with 16084559 or 2584559

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Agilent-086281 0.05I  G4125A

description:
Arrays of this design have barcodes that begin with 16086281 or 2586281

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Illumina NextSeq 500 (Rattus)

organism: Rattus


title: Agilent-086411 0.05mGyN  G4125A

description:
Arrays of this design have barcodes that begin with 16086411 or 2586411

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: AB SOLiD 4 System (Thermococcus kodakarensis)

organism: Thermococcus kodakarensis


title: NextSeq 2000 (Prevotella timonensis)

organism: Hoylesella timonensis


title: Illumina NextSeq 500 (Actinobacillus pleuropneumoniae serovar 1 str. 4074)

status: Public on Jul 05 2022


title: NextSeq 2000 (Alistipes finegoldii)

organism: Alistipes finegoldii


title: NextSeq 2000 (Parabacteroides merdae)

organism: Parabacteroides merdae


title: Illumina HiSeq 2500 (Shewanella putrefaciens)

organism: Shewanella putrefaciens


title: NextSeq 550 (Haloferax volcanii DS2)

organism: Haloferax volcanii DS2


title: WULS, apple seeds RT-qPCR

status: Public on Jul 07 2022

city: Warsaw

first: Katarzyna

last: Ciacka

address: Nowoursynowska 166

institute: Warsaw University of Life Sciences

organism: Malus domestica

description:
catalog number #172-5124
PCR assay

manufacture_protocol: see manufacturer's website


title: NextSeq 2000 (human feces metagenome)

organism: human feces metagenome


title: NextSeq 2000 (Prevotella copri)

organism: Segatella copri


title: Illumina NextSeq 500 (Eliomys quercinus)

organism: Eliomys quercinus


title: NextSeq 2000 (Bacillus subtilis)

organism: Bacillus subtilis


title: HiSeq X Ten (Clostridium autoethanogenum)

organism: Clostridium autoethanogenum


title: PCR Panel for Stem Cell Markers

city: Toronto

first: Sarah

middle: Katherina

last: Steinbach

state: Ontario

address: 200 Elizabeth Street

department: Experimental Therapeutics

institute: University Health Network

organism: Rattus norvegicus

description: PCR assay panel

manufacture_protocol: See manuscript


title: NanoString nCounter Prognostic Liver Signature for NAFLD (PLS-NAFLD)

status: Public on Jul 01 2022

city: Tsu city

first: Naoto

last: Fujiwara

state: Mie

address: 2-174 Edobashi

institute: Mie University

organism: Homo sapiens

manufacture_protocol: See manufacturer's website (http://www.nanostring.com).


title: MinION (Daphnia magna)

organism: Daphnia magna


title: Infinium OmniExpress-24v1-3_A1

city: Bethesda

first: GEO

last: admin

state: MD

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

technology: oligonucleotide beads

manufacture_protocol: See manufacturer's website


title: Agilent-064590 Candida glabrata v2 [Probe Name version]

status: Public on May 16 2022

city: Aveiro

first: Ana

last: Soares

address: Campus de Santiago

country: Portugal

institute: University of Aveiro

organism: Nakaseomyces glabratus

description:
Updated Candida glabrata 8x15k array design with data from YGOB (accessed Feb. 2014)

Arrays of this design have barcodes that begin with 16064590 or 2564590.


title: Agilent-048848 JLSoto 1.0 039494

status: Public on Feb 01 2022

city: Elche

first: Víctor M.

last: Barberá

state: Not US or Canada

address: Camí de l'Almazara, 11

department: Laboratorio de Genética Molecular

country: Spain

institute: Hospital General Universitario de Elche

description:
Arrays of this design have barcodes that begin with 16048848 or 2548848.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: Influenza hemagglutinin array 1

city: Rockville

first: Johannes

last: Goll

address: 401 N Washington St

department: Bioinformatics Service Group

institute: The Emmes Company

organism:
Influenza A virus
Influenza B virus

technology: spotted peptide or protein


title: nCounter Mouse Inflammation panel V2

status: Public on Jun 29 2016

city: Seattle

first: NanoString

last: Technologies

address: 530 Fairview Ave N  |  Suite 2000

institute: NanoString Technologies

organism: Mus musculus


title: [HuGene-2_1-st] Affymetrix Human Gene 2.1 ST Array [hugene21st_Hs_ENTREZG_24.0.0]

status: Public on Jul 04 2022

description:
Brainarray: hugene21st_Hs_ENTREZG_24.0.0
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/24.0.0/entrezg.asp

manufacture_protocol: See manufacturer's web site


title: Influenza hemagglutinin array 2