title: Illumina iSeq 100 (Saccharomyces cerevisiae)

status: Public on Jan 31 2024

last: GEO

country: USA

organism: Saccharomyces cerevisiae

technology: high-throughput sequencing

distribution: virtual


title: HiSeq X Ten (Citrobacter rodentium)

organism: Citrobacter rodentium


title: Illumina NovaSeq 6000 (Kluyveromyces lactis)

status: Public on Jan 30 2024

organism: Kluyveromyces lactis


title: NextSeq 550 (Zea luxurians)

organism: Zea luxurians


title: NextSeq 550 (Zea mays subsp. parviglumis)

organism: Zea mays subsp. parviglumis


title: NextSeq 550 (Zea mays subsp. mexicana)

organism: Zea mays subsp. mexicana


title: NextSeq 550 (Zea mays subsp. mays)

organism: Zea mays subsp. mays


title: Illumina HiSeq 4000 (Clostridioides difficile R20291)

organism: Clostridioides difficile R20291


title: Illumina MiSeq (Gasterosteus aculeatus)

organism: Gasterosteus aculeatus


title: Illumina HiSeq 4000 (Corynebacterium glutamicum)

organism: Corynebacterium glutamicum


title: Illumina NovaSeq 6000 (Phyllostachys nigra)

status: Public on Jan 29 2024

organism: Phyllostachys nigra


title: Illumina NextSeq 500 (Zea mays subsp. parviglumis)


title: Illumina HiSeq 4000 (Staphylococcus aureus subsp. aureus str. JKD6008)


title: NextSeq 550 (Artibeus jamaicensis)

status: Public on Jan 28 2024

organism: Artibeus jamaicensis


title: Illumina HiSeq 2500 (Disanthus cercidifolius subsp. longipes)

organism: Disanthus cercidifolius subsp. longipes


title: Illumina NextSeq 500 (Crotalus oreganus lutosus)

organism: Crotalus lutosus


title: Illumina NextSeq 500 (Crotalus oreganus concolor)

organism: Crotalus concolor


title: NextSeq 2000 (Aspergillus niger)

status: Public on Jan 26 2024

organism: Aspergillus niger


title: Illumina NextSeq 500 (Synechococcus elongatus PCC 7942 = FACHB-805)

status: Public on Jan 27 2024


title: HiSeq X Ten (Axonopus compressus)

organism: Axonopus compressus


title: Illumina NovaSeq 6000 (Atractylodes macrocephala)

status: Public on Jan 25 2024

organism: Atractylodes macrocephala


title: Illumina NovaSeq 6000 (Dendrobium nobile)

status: Public on Jan 24 2024

organism: Dendrobium nobile


title: DNBSEQ-T7 (Eublepharis macularius)

organism: Eublepharis macularius


title: Illumina HiSeq 4000 (Malassezia sympodialis)

organism: Malassezia sympodialis


title: Illumina MiSeq (Brassica napus)

organism: Brassica napus


title: Illumina NovaSeq 6000 (Hipposideros armiger)

status: Public on Jan 23 2024

organism: Hipposideros armiger


title: NextSeq 550 (Pseudomonas savastanoi pv. savastanoi)

organism: Pseudomonas savastanoi pv. savastanoi


title: HiSeq X Ten (Carassius auratus)

organism: Carassius auratus


title: Illumina HiSeq 3000 (Gasterosteus aculeatus)

organism: Gasterosteus aculeatus


title: MinION (Coturnix japonica)

organism: Coturnix japonica


title: Illumina MiSeq (Escherichia coli LF82)

status: Public on Jan 22 2024

organism: Escherichia coli LF82


title: Illumina NovaSeq 6000 (Carassius auratus)


title: NextSeq 1000 (Arabidopsis thaliana)

organism: Arabidopsis thaliana


title: PamGene STK Array

city: Freiburg

first: Robert

last: Zeiser

address: Hugstetter Strasse 53

department: Inner Medicine 1

country: Germany

organism: Mus musculus

technology: spotted peptide or protein

distribution: custom-commercial


title: Infinium OmniExpress-24v1.4

city: Bethesda

first: GEO

last: admin

state: MD

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

organism: Homo sapiens

technology: oligonucleotide beads

distribution: commercial

manufacture_protocol: See manufacturer's website


title: Illumina NovaSeq 6000 (Cunninghamia lanceolata)

organism: Cunninghamia lanceolata


title: DNBSEQ-G400 (Toxoplasma gondii RH)

organism: Toxoplasma gondii RH


title: Illumina HiSeq 2500 (Skeletonema costatum)

status: Public on Jan 21 2024

organism: Skeletonema costatum


title: DNBSEQ-T7 (Bombyx mandarina)

status: Public on Jan 19 2024

organism: Bombyx mandarina


title: DNBSEQ-T7 (Bombyx mori)

organism: Bombyx mori


title: Illumina NovaSeq 6000 (Bombyx mandarina)


title: Illumina NovaSeq 6000 (Phtheirospermum japonicum)

organism: Phtheirospermum japonicum


title: Illumina NovaSeq 6000 (Trichomonas vaginalis)

status: Public on Jan 18 2024

organism: Trichomonas vaginalis


title: Illumina MiSeq (Arabidopsis thaliana; Trichoderma atroviride)

organism:
Arabidopsis thaliana
Trichoderma atroviride


title: Cartana in situ sequencing (ISS)

status: Public on Jan 17 2024

city: St. Louis

first: Haojia

last: Wu

state: Missouri

address: 600 S Euclid Ave

department: Renal Division/Internal Medicine

institute: Washington University in St. Louis

organism: synthetic construct

technology: other

manufacture_protocol: not applicable


title: Illumina NovaSeq 6000 (Triatoma dimidiata)

organism: Triatoma dimidiata


title: NanoString C. albicans panel

status: Public on Jan 20 2024

city: Iowa City

first: Rohan

middle: S.

last: Wakade

state: Iowa

address: 25, South Grand Avenue, 2020 MedLabs, Department of Pediatrics

department: Department of Pediatrics

institute: University of Iowa

organism: Candida albicans

description: The probe set contains 186 environmentally responsive gene sets.

manufacture_protocol: see Manufacturer's website


title: Illumina NextSeq 500 (Escherichia coli; Escherichia phage T4)

organism:
Escherichia coli
Escherichia phage T4


title: DNBSEQ-G400 (Escherichia coli; Escherichia phage T4)


title: GGP Mouse (GIGA-MUGA Illumina ID)

manufacture_protocol: See manufacturer's website (http://illumina.com)


title: Illumina NextSeq 500 (Fusarium mangiferae)

organism: Fusarium mangiferae


title: HiSeq X Ten (Carassius gibelio)

organism: Carassius gibelio


title: Illumina HiSeq 2500 (Methylotuvimicrobium alcaliphilum 20Z)

status: Public on Jan 16 2024

organism: Methylotuvimicrobium alcaliphilum 20Z


title: GGP Mouse (GIGA-MUGA)

organism: Mus musculus


title: Illumina HiSeq 2000 (Camelina sativa)

organism: Camelina sativa


title: NextSeq 2000 (Cannabis sativa)

organism: Cannabis sativa


title: Illumina NovaSeq 6000 (Danaus plexippus)

organism: Danaus plexippus


title: Protein array for phosphorylation measurement and pathway analysis

city: Kanazawa

first: Masao

last: Honda

address: Takara-Machi 13-1

department: Gastroenterology

country: Japan

institute: Kanazawa University

organism: Homo sapiens

technology: antibody

distribution: non-commercial

manufacturer: National Institute of Advanced Industrial Science and Technology


title: Illumina HiSeq 2000 (Phaseolus lunatus)

organism: Phaseolus lunatus


title: Illumina HiSeq 2500 (Staphylococcus aureus RF122)

organism: Staphylococcus aureus RF122


title: Illumina NovaSeq 6000 (Malus sylvestris)

organism: Malus sylvestris


title: Illumina NovaSeq 6000 (Malus pumila)

organism: Malus pumila


title: Illumina HiSeq 2000 (Trametes coccinea)

organism: Trametes coccinea


title: Illumina NovaSeq 6000 (Malus hupehensis)

organism: Malus hupehensis


title: Illumina HiSeq 2000 (Trametes elegans)

organism: Trametes elegans


title: Illumina HiSeq 2500 (Nakaseomyces glabratus; Saccharomyces cerevisiae)

status: Public on Jan 15 2024

organism:
Saccharomyces cerevisiae
Nakaseomyces glabratus


title: Illumina HiSeq 4000 (Agrobacterium tumefaciens)

status: Public on Jan 12 2024

organism: Agrobacterium tumefaciens


title: Illumina HiSeq 2000 (Fusarium oxysporum f. sp. lycopersici)

organism: Fusarium oxysporum f. sp. lycopersici


title: MinION (Bacillus cereus)

organism: Bacillus cereus


title: Illumina NovaSeq 6000 (Clostridioides difficile; Clostridium sardiniense; Mus musculus)

organism:
Clostridioides difficile
Mus musculus
Clostridium sardiniense


title: Illumina NovaSeq 6000 (Paramacrobiotus metropolitanus)

organism: Paramacrobiotus metropolitanus


title: Nanostring nCounter mRNA Custom CodeSet

city: Lausanne

first: Leonore

last: Wigger

address: Amphipôle Building

country: Switzerland

institute: Swiss Institute of Bioinformatics

organism: Mus musculus


title: DNBSEQ-G50 (Drosophila melanogaster)

organism: Drosophila melanogaster


title: Illumina NextSeq 500 (Fusarium oxysporum f. sp. lycopersici)


title: DNBSEQ-G400 (Aspergillus niger)

status: Public on Jan 11 2024

organism: Aspergillus niger


title: Agilent-021828 Mouse miRNA Microarray (miRNA_ID version)

technology: in situ oligonucleotide

description:
miRNA_105_Jan09
mm9:NCBI37:Jul2007

manufacture_protocol: see manufacturer's web site at http://www.agilent.com/


title: Illumina NovaSeq 6000 (Acropora selago x Acropora millepora)

status: Public on Jan 10 2024

organism: Acropora selago x Acropora millepora


title: Illumina NovaSeq 6000 (Acropora selago)

organism: Acropora selago


title: Illumina HiSeq 4000 (Populus wulianensis)

organism: Populus wulianensis


title: Illumina NovaSeq 6000 (Raphanus raphanistrum)

organism: Raphanus raphanistrum


title: Illumina NovaSeq 6000 (Isatis lusitanica)

organism: Isatis lusitanica


title: Illumina HiSeq 4000 (Sulfolobus islandicus)

status: Public on Jan 09 2024

organism: Saccharolobus islandicus


title: Illumina NovaSeq 6000 (Pundamilia nyererei)

organism: Pundamilia nyererei


title: Illumina NovaSeq 6000 (Maylandia zebra)

organism: Maylandia zebra


title: Illumina NovaSeq 6000 (Tropheops sp. 'mauve')

organism: Tropheops sp. 'mauve'


title: Illumina NovaSeq 6000 (Asparagus officinalis)

status: Public on Jan 04 2024

organism: Asparagus officinalis


title: Illumina NovaSeq 6000 (Blastococcus saxobsidens DD2)

organism: Blastococcus saxobsidens DD2


title: Illumina HiSeq 2500 (Xanthomonas citri subsp. citri 306)

status: Public on Jan 05 2024

organism: Xanthomonas citri subsp. citri 306


title: DNBSEQ-G400 (Schizosaccharomyces pombe)

organism: Schizosaccharomyces pombe


title: NanoString nCounter Mouse Host Response V1.0 Panel [NS_Mm_HostResponse_v1.0]

city: Chapel Hill

first: Shailesh

middle: Kumar

last: Choudhary

state: NC

address: 3300 Thurston Bldg., CB#7280

department: Medicine

institute: University of North Carolina at Chapel Hill

manufacture_protocol: See NanoString website


title: BGISEQ-500 (Sebastes melanops)

status: Public on Jan 03 2024

organism: Sebastes melanops


title: Agilent-084626 Ensembl87_Marmoset_8x60k_20170125 (Probe Name version)

first: Shin-ichi

last: Horike

state: Ishikawa

address: 13-1 Takaramachi

department: Research Center for Experimental Modeling of Human Disease

organism: Callithrix jacchus


title: Illumina HiSeq 3000 (Pisum sativum)

status: Public on Jan 02 2024

organism: Lathyrus oleraceus


title: Illumina HiSeq 4000 (Trifolium repens)

organism: Trifolium repens


title: Illumina HiSeq 3000 (Streptococcus pneumoniae D39)

organism: Streptococcus pneumoniae D39


title: DNBSEQ-G400 (Aurantiochytrium limacinum)

organism: Aurantiochytrium limacinum


title: Infinium MethylationEPIC and HumanMethylation450 BeadChip

city: Yamadaoka,Suitashi

first: Yuya

last: Arakawa

state: Osaka

department: Graduate school of Medicine

institute: Osaka university

organism: Homo sapiens


title: Illumina NovaSeq 6000 (Citrobacter rodentium)

organism: Citrobacter rodentium


title: MD Anderson RPPA Core Array

status: Public on Jan 01 2024

city: Houston

first: Ju-Seog

last: Lee

state: Texas

address: 6565 MD Anderson Blvd

institute: UT MD Anderson Cancer Ctr.


title: Target 96 Neuro Exploratory panel v.3911

city: North Grafton

first: Jillian

middle: M

last: Richmond

state: Massachusetts

address: 200 Westboro Road

department: Comparative Pathobiology

institute: Tufts Cummings School of Veterinary Medicine

manufacture_protocol:
RT-PCR-based detection of protein analytes using oligonucleotide conjugated antibodies
https://www.olink.com/content/uploads/2017/11/0935-v1.9.4-Proseek-Multiplex-User-Manual_final.pdf
https://www.olink.com/content/uploads/2019/07/Olink-Neuro-Exploratory-Validation-Data-v1.2.pdf


title: RT² Profiler™ PCR Array Human T Helper Cell Differentiation

city: Pittsburgh

first: Erica

last: Braverman

state: PA

address: 4401 Penn Ave

institute: University of Pittsburgh

technology: RT-PCR

description: PCR assay Panel

manufacture_protocol: see manufacturer's website


title: Illumina NovaSeq 6000 (Haplochromis burtoni)

organism: Haplochromis burtoni


title: Agilent-065570 Mouse GXP_8X60k

city: Delhi

first: Vivek

middle: T

last: Natarajan

state: Delhi

address: Mathura Road

country: India

institute: CSIR-IGIB

organism: Mus musculus


title: Agilent-086353 Corynebacterium glutamicum Cgl_NC003450.3_v2

city: Saarbruecken

first: Michael

last: Kohlstedt

address: Campus A1.5

institute: Saarland University

organism: Corynebacterium glutamicum

description:
Whole transcriptome of C. glutamicum ATCC 13032 + heterologous sequences, NCBI genome, version from 10. March, 2020
Arrays of this design have barcodes that begin with 16086353 or 2586353.
Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
The ID column represents the Agilent Feature Extraction feature number.
Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.


title: NanoString nCounter SPRINT Profiler Human Immunology V2 [NS_Immunology_v2_C2328]

status: Public on Mar 31 2022

city: Novosibirsk

first: Roman

middle: Yurievich

last: Perik-Zavodskii

state: Novosibirsk region

address: Yadrincevskaya 14

country: Russia

institute: "Research Institute of Fundamental and Clinical Immunology" (RIFCI)

description:
Nucleic acid fluorescence barcoding and automated fluorescence microscopy.
NS_Immunology_v2_C2328


title: NAPPA

city: Bronx

first: Jacqueline

middle: M.

last: Achkar

state: NY

address: 1300 Morris Park Ave

institute: Albert Einstein College of Medicine

organism: synthetic construct

technology: spotted DNA/cDNA

description: 3295 genes from H37Rv and 437 genes CDC1551 were cloned in a pANT7-cGST expression vector, which encodes a C-terminal fusion partner for the target gene of Glutathione-S-Transferase (GST)

manufacturer: Arizona State University Biodesign Institute and Engineering Arts Tempe Arizona

manufacture_protocol: The NAPPA print was performed on AU302 piezoelectric dispensing system (Engineering Arts LLC, Tempe, AZ, USA) by depositing MM (1200 pL/well) and plasmid(s) (100 ng/µl, 300 pL/well) sequentially utilizing 16 individual non-contact dispensing heads. The NAPPA slides were stored under an argon gas filled container at room temperature until the day of use when proteins were expressed.


title: Target 96 Inflammation panel v.3022

manufacture_protocol:
RT-PCR-based detection of protein analytes using oligonucleotide conjugated antibodies
https://www.olink.com/content/uploads/2017/11/0935-v1.9.4-Proseek-Multiplex-User-Manual_final.pdf
https://www.olink.com/content/uploads/2019/04/Olink-Inflammation-Validation-Data-v3.0.pdf


title: Agilent-082895 048306On1M_V2 [PROBE NAME VERSION]

status: Public on Dec 04 2023

city: Hannover

first: Oliver

last: Dittrich-Breiholz

address: Carl-Neuberg-Str. 1

department: Research Core Unit Genomics

institute: Medical School Hannover

description:
This platform for Agilent Design ID-082895 represents a refined version of the Agilent Whole Mouse Genome Oligo Microarray 4x44K v2 (Design ID 026655) comprised of all probes of this array in quadruplicates, but a different number of custom control probes. ID-082895 (048306On1M_V2) was developed by RCUG, using a 1x1M design format. All non-control probes of design ID 026655 were printed four times within a region comprising a total of 181560 Features. Four of such regions were placed within one 1M region.

Arrays of this design have barcodes that begin with 16082895 or 2582895.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Probe Names.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.