title: HiSeq X Ten (Dendrobaena veneta)

status: Public on May 30 2024

last: GEO

country: USA

organism: Dendrobaena veneta

technology: high-throughput sequencing

distribution: virtual


title: Illumina NovaSeq 6000 (Solanum acaule)

status: Public on May 29 2024

organism: Solanum acaule


title: Illumina NovaSeq 6000 (Ichthyophis bannanicus)

organism: Ichthyophis bannanicus


title: Illumina NovaSeq X (Oryza sativa)

organism: Oryza sativa


title: Illumina NovaSeq X (Saccharomyces cerevisiae)

status: Public on May 31 2024

organism: Saccharomyces cerevisiae


title: HiSeq X Ten (Vibrio parahaemolyticus)

status: Public on May 28 2024

organism: Vibrio parahaemolyticus


title: NextSeq 550 (Oryzias latipes)

status: Public on May 24 2024

organism: Oryzias latipes


title: Agilent-086188 Agilent Human ceRNA Microarray 2019 [ProbeName version]

city: Bethesda

first: GEO

last: admin

state: MD

address: 9000 Rockville Pike

institute: NCBI/NLM/NIH

organism: Homo sapiens

technology: in situ oligonucleotide

distribution: commercial

manufacture_protocol: see manufacturer's web site at https://www.agilent.com/


title: Illumina NovaSeq 6000 (Encephalitozoon intestinalis; Homo sapiens)

organism:
Homo sapiens
Encephalitozoon intestinalis


title: Illumina NovaSeq 6000 (Bordetella bronchiseptica)

organism: Bordetella bronchiseptica


title: Illumina HiSeq 4000 (Pterosperma cristatum)

organism: Pterosperma cristatum


title: Illumina HiSeq 1000 (Serratia marcescens)

status: Public on May 22 2024

organism: Serratia marcescens


title: Illumina NovaSeq 6000 (Bacillus velezensis)

organism: Bacillus velezensis


title: Illumina HiSeq 1000 (Chitinophaga pinensis)

organism: Chitinophaga pinensis


title: Illumina HiSeq 1000 (Cellvibrio japonicus)

organism: Cellvibrio japonicus


title: NextSeq 2000 (Cystoisospora suis)

organism: Cystoisospora suis


title: Illumina HiSeq 4000 (Vibrio parahaemolyticus)

status: Public on May 23 2024


title: NextSeq 2000 (Prevotella bivia)

organism: Prevotella bivia


title: MinION (Lupinus albus)

organism: Lupinus albus


title: NextSeq 2000 (Fannyhessea vaginae; Gardnerella vaginalis; Prevotella bivia)

organism:
Gardnerella vaginalis
Prevotella bivia
Fannyhessea vaginae


title: NextSeq 2000 (Fannyhessea vaginae)

organism: Fannyhessea vaginae


title: NextSeq 2000 (Gardnerella vaginalis)

organism: Gardnerella vaginalis


title: Illumina NovaSeq 6000 (Mitragyna speciosa)

organism: Mitragyna speciosa


title: Illumina NovaSeq 6000 (Mus musculus; Plasmodium berghei ANKA)

organism:
Plasmodium berghei ANKA
Mus musculus


title: NextSeq 550 (Elephas maximus indicus)

status: Public on May 21 2024

organism: Elephas maximus indicus


title: Illumina HiSeq 2500 (Elephas maximus indicus)


title: UG 100 (Elephas maximus indicus)


title: Illumina NextSeq 500 (Elephas maximus indicus)


title: nCounter PanCancer IO 360 Panel

city: Omaha

first: Dalia

last: El-Gamal

state: NE

address: 986805 NE Med Center BCC 4.12.396

department: Eppley Institute

institute: University of Nebraska Medical Center

organism: Mus musculus

technology: other

description: targeted RNA sequencing

distribution: custom-commercial

manufacture_protocol: see manufacturer's website


title: Illumina HiSeq 2000 (Elephas maximus indicus)


title: NextSeq 550 (Mammuthus primigenius)

organism: Mammuthus primigenius


title: Illumina NovaSeq 6000 (Mammuthus primigenius)


title: Illumina NextSeq 500 (Montipora capitata)

status: Public on May 20 2024

organism: Montipora capitata


title: Illumina NovaSeq X Plus (Ictalurus punctatus)

organism: Ictalurus punctatus


title: Illumina NovaSeq 6000 (Heterodera glycines)

organism: Heterodera glycines


title: Illumina NovaSeq 6000 (Leishmania donovani)

organism: Leishmania donovani


title: Illumina NovaSeq 6000 (Ditylenchus destructor)

organism: Ditylenchus destructor


title: Ion Torrent S5 (Hyphopichia pseudoburtonii)

organism: Hyphopichia pseudoburtonii


title: Illumina NextSeq 500 (Oscheius tipulae)

organism: Oscheius tipulae


title: Illumina NovaSeq 6000 (Meloidogyne incognita)

organism: Meloidogyne incognita


title: Element AVITI (Bison bison)

organism: Bison bison


title: DNBSEQ-G400 (Mammuthus primigenius)


title: Illumina NovaSeq 6000 (Pristionchus pacificus)

organism: Pristionchus pacificus


title: Element AVITI (Bos taurus)

organism: Bos taurus


title: Illumina NextSeq 500 (Pristionchus pacificus)


title: NextSeq 2000 (Mus musculus; Plasmodium berghei ANKA)


title: GeoChip 5.0 (60k)

status: Public on May 18 2024

city: Guangzhou

first: Yarong

last: Liu

state: Guangzhou/Guangdong

address: No. 1 Xingyu Road

department: Aquaculture and Nutrition Research Lab

country: China

institute: Pearl River Fisheries Research Institute, Chinese Academy of Fishery Sciences

organism: wastewater metagenome


title: NanoString nCounter

status: Public on May 15 2024

first: Stefan

middle: A

last: Muljo

address: 10 CENTER DR RM 11N306

institute: NIH/NIAID

organism: Homo sapiens

description: Barcoded Probe Hybridization and Digital Counting


title: Illumina NextSeq 500 (Mus musculus; Plasmodium berghei ANKA)

organism:
Plasmodium berghei ANKA
Mus musculus


title: DNBSEQ-G400 (Escherichia coli str. K-12 substr. MG1655)

status: Public on May 16 2024


title: Ion Torrent S5 (Botrytis cinerea; Hyphopichia pseudoburtonii)

organism:
Botrytis cinerea
Hyphopichia pseudoburtonii


title: Illumina NovaSeq 6000 (Erysipelotrichaceae bacterium DSM 116809)


title: PromethION (Oryza sativa)

organism: Oryza sativa


title: Element AVITI (Homo sapiens; Mus musculus)

status: Public on May 14 2024

organism:
Homo sapiens
Mus musculus


title: Illumina NovaSeq 6000 (Glycine soja)

organism: Glycine soja


title: Illumina NovaSeq 6000 (Listeria monocytogenes serotype 4b str. F2365)


title: Sequel IIe (Saccharomyces cerevisiae)

organism: Saccharomyces cerevisiae


title: Illumina NextSeq 500 (Shigella flexneri)

organism: Shigella flexneri


title: Illumina MiniSeq (Mycobacterium tuberculosis)

organism: Mycobacterium tuberculosis


title: Illumina NextSeq 500 (Citrobacter rodentium)

organism: Citrobacter rodentium


title: HiSeq X Ten (Synechocystis sp. PCC 6803)

status: Public on May 13 2024

organism: Synechocystis sp. PCC 6803


title: Element AVITI (Mus musculus)

organism: Mus musculus


title: Illumina HiSeq 4000 (Salpingoeca rosetta)

organism: Salpingoeca rosetta


title: Illumina NovaSeq 6000 (Cyanophora paradoxa)

organism: Cyanophora paradoxa


title: NextSeq 550 (Thermoplasma acidophilum)

organism: Thermoplasma acidophilum


title: HiSeq X Ten (Thermoplasma acidophilum)


title: Illumina HiSeq 4000 (Brachypodium distachyon)

organism: Brachypodium distachyon


title: HiSeq X Ten (Pistacia vera)

status: Public on May 10 2024

organism: Pistacia vera


title: NextSeq 2000 (Daphnia magna)

status: Public on May 08 2024

organism: Daphnia magna


title: RT-PCR Atlantic Salmon

city: St. John's

first: Albert

last: Caballero Solares

state: NL

address: 0 Marine Lab Road

department: Ocean Sciences

country: Canada

institute: Memorial University of Newfoundland

organism: Salmo salar

technology: RT-PCR

description: PCR assay


title: RPPA platform

city: New York

first: Tiphaine

middle: Christiane

last: Martin

address: 1470 Madison Ave

department: Oncological Sciences

institute: Icahn School of Medicine at Mount Sinai, Tisch Cancer Institute

organism: Homo sapiens

technology: antibody

distribution: non-commercial

manufacture_protocol:
RPPA Core Facility at the University of Texas MD Anderson Cancer Center
https://www.mdanderson.org/education-and-research/resources-for-professionals/scientific-resources/core-facilities-and-services/functional-proteomics-rppa-core/antibody-lists-protocols/functional-proteomics-reverse-phase-protein-array-core-facility-antibody-lists-and-protocols.html


title: Illumina NovaSeq 6000 (Cloning vector pBR322)

status: Public on May 09 2024

organism: Cloning vector pBR322


title: Infinium Methylation Screening Array (MSA)

status: Public on May 11 2024

city: Philadelphia

first: Wanding

last: Zhou

state: PA

address: 3501 Civic Center Blvd

department: Pathology and Lab Medicine

institute: Children's Hospital of Philadelphia

technology: spotted oligonucleotide


title: Illumina NextSeq 500 (Strongylus vulgaris)

status: Public on May 04 2024

organism: Strongylus vulgaris


title: Illumina HiSeq 3000 (Vibrio parahaemolyticus)

status: Public on May 07 2024

organism: Vibrio parahaemolyticus


title: Illumina NovaSeq 6000 (Cannabis sativa)

organism: Cannabis sativa


title: HuProt v3.1 arrays (CDI Laboratories, Inc.)

city: Shanghai

first: Xiangjia

last: Zhu

address: No.83 Fenyang Road

institute: Eye & ENT Hospital, Fudan University

technology: spotted peptide or protein

manufacture_protocol: A human proteome microarray that contains over 20,000 recombinant human full-length proteins expressed and purified from yeast


title: SOMAscan human proteomic assay [SOMAscan version 4.1] SeqID version

city: Rockville

first: Yu

last: Fan

address: 9609 Medical Center Dr

institute: NCI/CBIIT

manufacture_protocol: See manufacturer's website (somalogic.com).


title: [STYLMONOa520430F] Custom Affymetrix GeneChip for Salmonella enterica subsp. enterica sv. Typhimurium LT2 ATCC 700720

city: Davis

first: Bart

last: Weimer

state: CA

address: 1 Shields Ave

institute: UC Davis

organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2


title: Illumina NovaSeq X Plus (Drosophila melanogaster)

organism: Drosophila melanogaster


title: DNBSEQ-T7 (Tamias sibiricus)

status: Public on May 02 2024

organism: Tamias sibiricus


title: [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [mogene20st_Mm_ENTREZG_24.0.0], DO SNPs removed

city: Boston

first: Boston University

last: Microarray and Sequencing Resource

state: MA

address: 72 East Concord Street, E631

department: Microarray and Sequencing Resource

institute: Boston University

manufacture_protocol: See manufacturer's web site.


title: RT² Profiler™ PCR Array Mouse Nuclear Receptors & Coregulators (PAMM-056Y)

status: Public on May 03 2024

city: Bloomington

first: Patricia

last: Silveyra

email: psilveyr@iu.edu, ptrcslvr@gmail.com

state: Indiana

department: Environmental and Occupational Health

institute: Indiana University Bloomington

description:
PCR assay
https://geneglobe.qiagen.com/us/product-groups/rt2-profiler-pcr-arrays?q=PAMM-056Y
The Mouse Nuclear Receptors & Coregulators RT² Profiler™ PCR Array profiles the expression of 84 genes encoding nuclear receptors and their coregulators. The array includes receptors for thyroid and steroid hormones, receptors for retinoids and vitamin D, as well as orphan receptors. Coactivators and corepressors of nuclear receptor activity are also included on this array as well as chromatin modifying enzymes. Using real-time PCR, you can easily and reliably analyze expression of a focused panel of nuclear receptors and coregulators with this array.


title: DNBSEQ-T7 (Pantherophis guttatus)

organism: Pantherophis guttatus


title: DNBSEQ-T7 (Felis catus)

organism: Felis catus


title: Exiqon miRCURY LNA miRNA Array, 7th generation [miRBase v21; batch 208500-2,208510,208520-22; lot 35111]

first: Yang

last: Wang

address: 1665 Kongjiang Road

institute: Xinhua Hospital of Shanghai Jiao Tong University School of Medicine

organism:
Homo sapiens
Human alphaherpesvirus 1
Human betaherpesvirus 5
Herpesvirus saimiri (strain 11)
JC polyomavirus
Human immunodeficiency virus 1
Human betaherpesvirus 6B
Human gammaherpesvirus 8
Merkel cell polyomavirus

description:
Product=miRCURY LNA microRNA Array, 7th generation - hsa, mmu & rno
ProductDate=March 2012
ProductNumber=208500,208501,208502,208510,208520,208521,208522
LotNumberRange=35111-35111
Organism(s)=Homo sapiens, Human Epstein-barr virus, Human Human herpesvirus 5, Human Human immunodeficiency virus 1, Human Human herpesvirus 1, Human Human herpesvirus 8, Simian Simian virus 40, Human JC polyomavirus, Human BK polyomavirus, Human Merkel cell polyomavirus, Human Herpes simplex virus 2, Human Herpes B virus, Human Herpesvirus saimiri strain A11, Human Human herpesvirus 6B
GalFileCreationDate=2015-12-14 15:24
ArrayContents_DesignedFor=miRBase 18.0
ArrayContents_CurrentNameColumn=miRBase 21.0
ArrayContents_CurrentNameColumnCoverage=Homo sapiens and related vira:75.06%


title: DNBSEQ-T7 (Melopsittacus undulatus)

organism: Melopsittacus undulatus


title: DNBSEQ-T7 (Channa argus)

organism: Channa argus


title: NextSeq 550 (Thermococcus kodakarensis)

organism: Thermococcus kodakarensis


title: DNBSEQ-T7 (Meriones unguiculatus)

organism: Meriones unguiculatus


title: DNBSEQ-T7 (Serinus canaria)

organism: Serinus canaria


title: DNBSEQ-T7 (Ctenopharyngodon idella)

organism: Ctenopharyngodon idella


title: Illumina NovaSeq 6000 (Mus musculus; Mycobacterium tuberculosis)

organism:
Mycobacterium tuberculosis
Mus musculus


title: Illumina MiSeq (Candida albicans SC5314)

organism: Candida albicans SC5314


title: DNBSEQ-T7 (Atelerix algirus)

organism: Atelerix algirus


title: DNBSEQ-T7 (Oreochromis mossambicus)

organism: Oreochromis mossambicus


title: DNBSEQ-T7 (Anas platyrhynchos)

organism: Anas platyrhynchos


title: DNBSEQ-T7 (Macaca fascicularis)

organism: Macaca fascicularis


title: Nanostring nCounter  human array

organism: Homo sapiens

manufacture_protocol: See manufacturer's website (http://www.nanostring.com)


title: DNBSEQ-T7 (Pogona vitticeps)

organism: Pogona vitticeps


title: [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [CDF: GC_M_HTA_3utr_Grch38,binary.cdf]

status: Public on Aug 11 2020

city: Stirling

first: James

last: Timmons

address: Bridge of Allan

country: United Kingdom

institute: Augur Precision Medicine LTD

manufacture_protocol: See manufacturers website


title: [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [CDF: GC_M_HTA_5utr_Grch38,binary.cdf]


title: [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [GC_CHF_Blood_HTA_ENSG_Grch38]

status: Public on Mar 01 2023


title: Illumina NovaSeq 6000 (Huso dauricus)

status: Public on May 01 2024

organism: Huso dauricus


title: DNBSEQ-T7 (Cavia porcellus)

organism: Cavia porcellus


title: [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray HGU133Plus2_Hs_ENTREZG_v13]

status: Public on Jun 04 2019

description: This array is identical to GPL570 but the data were analyzed with a custom CDF environment.

manufacture_protocol: Refer to Affymetrix manufacture protocol for HG-U133 Plus 2.0 array


title: [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [CDF:  Muscle_genome-build-id_ENST_binary]

status: Public on Jul 30 2018


title: DNBSEQ-T7 (Mustela putorius furo)

organism: Mustela putorius furo


title: NanoString  nCounter Human  Metabolic Pathways Panel [Gene Symbol version]

status: Public on Dec 31 2022

city: Bialystok

first: Iwona

last: Sidorkiewicz

address: Sklodowska-Curie Street 24a

department: Clinical Research Centre

country: Poland

institute: Medical University of Bialystok

manufacture_protocol: oligonucleotide probes tagged with identifiers consisting of a unique sequences of multi-color fluorophores


title: DNBSEQ-T7 (Trachemys scripta elegans)

organism: Trachemys scripta elegans


title: NanoString nCounter Rat miRNA Expression Assay, V1.5

status: Public on Mar 23 2015

city: Seattle

first: NanoString

last: Technologies

address: 530 Fairview Ave N  |  Suite 2000

institute: NanoString Technologies

organism: Rattus norvegicus


title: [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [Ver. 22.0.0, MoEx10stv1_Mm_ENSG]

status: Public on Mar 06 2018

organism: Mus musculus

relation: Alternative to: GPL6096 (official version)

manufacture_protocol: Affymetrix


title: Affymetrix GeneChip Human Genome U133 Plus 2.0 Array [HGU133Plus2_Hs_ENST (v10) CDF]

status: Public on Feb 04 2010

description: This is identical to GPL570 but a custom CDF environment was used to extract data. The custom chip definition file (CDF) was based on Ensembl transcript annotation (Hs133P_Hs_ENST_version10.CDF) rather than Affymetrix annotation (Dai et al., PMID: 16284200).  The CDF can be found at the link below.

manufacture_protocol: see manufacturer's web site