title: total RNA-seq from smooth muscle cell (ENCSR052FJA)

summary:
The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway.  They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from G1E-ER4 (ENCSR181KQJ)

status: Public on Mar 18 2016

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

type: Expression profiling by high throughput sequencing

summary:
PSU mouse G1E-ER4+E2 RNA RNA-seq

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from OCI-LY7 (ENCSR001HHK)

summary:
The libraries contained in this experiment come from independent growths of cell line Oci-Ly-7, a peripherial blood sample from a 48 year old male with Non-Hodgkin lymphoma.  They are stranded PE101 Illumina Hi-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from CH12.LX (ENCSR000CWD)

summary:
Stanford mouse CH12 RNA-seq

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from midbrain (ENCSR255SDF)

summary:
The libraries contained in this experiment come from independent isolates of midbrain tissue.  They are stranded PE101 Illumina Hi-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from subcutaneous preadipocyte (ENCSR000CUM)

summary:
The libraries contained in this experiment come from subcutaneous white pre-adipocyte primary whole cells, HWP isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from fibroblast of villous mesenchyme (ENCSR000CUL)

summary:
The libraries contained in this experiment come from placental villous mesenchymal fibroblasts primary whole cells, HVMF  isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from mammary epithelial cell (ENCSR000CUN)

summary:
The libraries contained in this experiment come from mammary epithelial primary whole cells, HMEpC. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from melanocyte of skin (ENCSR000CUQ)

summary:
RNA-seq on humn skin melanocytes primary whole cells (NHEM-M2) from rRNA-depleted total RNA greater than 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from placental epithelial cell (ENCSR000CUP)

summary:
The libraries contained in this experiment come from placental epithelial primary whole cells, HPIEpC isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from fibroblast of the aortic adventitia (ENCSR000CUJ)

summary:
The libraries contained in this experiment come from aortic adventital fibroblast primary whole cells, HAoAF isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from thoracic aorta endothelial cell (ENCSR000CUK)

summary:
The libraries contained in this experiment come from aortic endothelial primary whole cells, HAoEC isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from vein endothelial cell (ENCSR000CUG)

summary:
The libraries contained in this experiment come from saphenous vein endothelial primary whole cells, HSaVEC isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from skeletal muscle satellite cell (ENCSR000CUI)

summary:
The libraries contained in this experiment come from skeletal muscle myosatellite cells isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from fibroblast of dermis (ENCSR000CUH)

summary:
The libraries contained in this experiment come from skin fibroblasts primary whole cells, NHDF isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from hematopoietic multipotent progenitor cell (ENCSR000CUA)

summary:
The libraries contained in this experiment come from the whole cell fraction of independent isolates of mobilized CD34+ blood progenitor cells. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from articular chondrocyte of knee joint (ENCSR000CUE)

summary:
The libraries contained in this experiment come from chondrocyte primary whole cells, HCH isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from heart (ENCSR035DLJ)

summary:
The libraries contained in this experiment come from independent isolates of heart tissue.  They are stranded PE101 Illumina Hi-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from fibroblast of lung (ENCSR000CPX)

summary:
The libraries contained in this experiment come from the whole cell fraction of independent growths of cell line AG04450. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted and DSN normalized Poly-A- RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from endothelial cell of umbilical vein (ENCSR000CQH)

summary:
RNA-seq on human HUVEC nucleus long polyA- RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from endothelial cell of umbilical vein (ENCSR000CQG)

summary:
RNA-seq on human HUVEC whole cell long polyA- RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from keratinocyte (ENCSR000CQO)

summary:
The libraries contained in this experiment come from independent growths of skin keratinocytes primary nuclear extracts, NHEK. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted and DSN normalized Poly-A- RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from fibroblast of lung (ENCSR000CPW)

summary:
The libraries contained in this experiment come from lung fibroblast primary whole cells, NHLF  isolated from independent donors. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted and DSN normalized Poly-A- RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from fibroblast of lung (ENCSR000CPM)

summary:
The libraries contained in this experiment come from lung fibroblast primary whole cells, NHLF  isolated from independent donors. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from keratinocyte (ENCSR000CQN)

summary:
The libraries contained in this experiment come from independent growths of skin keratinocytes primary cytoplasmic extracts, NHEK.  They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted and DSN normalized Poly-A- RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from pericyte cell (ENCSR000CTX)

summary:
The libraries contained in this experiment come from placental pericytes primary whole cells, HPC-PL isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from keratinocyte (ENCSR000CPL)

summary:
The libraries contained in this experiment come from independent growths of skin keratinocytes primary whole cells, NHEK. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from keratinocyte (ENCSR000CPK)

summary:
The libraries contained in this experiment come from independent growths of skin keratinocytes primary cytoplasmic extracts, NHEK.  They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from keratinocyte (ENCSR000CPJ)

summary:
The libraries contained in this experiment come from independent growths of skin keratinocytes primary nuclear extracts, NHEK.  They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from keratinocyte (ENCSR000CPI)

summary:
The libraries contained in this experiment come from independent growths of skin keratinocytes primary whole cells, NHEK. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted and DSN normalized Poly-A- RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from skeletal muscle myoblast (ENCSR000CPV)

summary:
RNA-seq on human HSMM whole cell long polyA- RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from osteoblast (ENCSR000CUF)

summary:
RNA-seq on human HOB whole cell long total RNA.The libraries contained in this experiment come from osteoblast primary whole cells, HOB  isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000CPB)

summary:
RNA-seq on human HUVEC nucleus long polyA+ RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from skeletal muscle myoblast (ENCSR000COY)

summary:
RNA-seq on human HSMM whole cell long polyA+ RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000COZ)

summary:
RNA-seq on human HUVEC whole cell long polyA+ RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000CPA)

summary:
RNA-seq on human HUVEC cytosol long polyA+ RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from hair follicle dermal papilla cell (ENCSR000CUB)

summary:
The libraries contained in this experiment come from hair follicle dermal papilla primary whole cells, HFDPC  isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from liver (ENCSR000AJU)

summary:
RNA-seq on 8 week mouse total liver greater than 200bp from total RNA.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from camera-type eye (ENCSR000AFO)

summary:
The libraries contained in this experiment come from human fetal whole eye tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from thyroid gland (ENCSR000AFK)

summary:
The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from uterus (ENCSR000AFN)

summary:
The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from stomach (ENCSR000AFI)

summary:
The libraries contained in this experiment come from human fetal stomach tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from tongue (ENCSR000AFL)

summary:
The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from temporal lobe (ENCSR000AFJ)

summary:
The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from skeletal muscle tissue (ENCSR000AFF)

summary:
The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from occipital lobe (ENCSR000AFD)

summary:
The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from skin of body (ENCSR000AFG)

summary:
The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from mammary epithelial cell (ENCSR000COX)

summary:
The libraries contained in this experiment come from mammary gland epithelial primary whole cells, HMEC isolated from independent donors. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted Poly-A+ > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from lung (ENCSR000AFC)

summary:
The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from CH12.LX (ENCSR000AJV)

summary:
RNA-seq on CH12 greater than 200bp polyA+

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from parietal lobe (ENCSR000AFE)

summary:
The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from heart (ENCSR000AEZ)

summary:
The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from liver (ENCSR000AFB)

summary:
The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from fibroblast of lung (ENCSR000COO)

summary:
The libraries contained in this experiment come from the whole cell fraction of independent growths of cell line AG04450. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from frontal cortex (ENCSR000AEY)

summary:
The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from metanephros (ENCSR000AFA)

summary:
The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from diencephalon (ENCSR000AEX)

summary:
The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from umbilical cord (ENCSR000AFM)

summary:
The libraries contained in this experiment come from human fetal umbilical cord tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from cerebellum (ENCSR000AEW)

summary:
The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from urinary bladder (ENCSR000AEV)

summary:
The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from liver (ENCSR000AEU)

summary:
RNA-seq on human liver greater than 200bp rRNA depleted total RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from spinal cord (ENCSR000AFH)

summary:
The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA depleted RNA-seq from mammary epithelial cell (ENCSR000CPU)

summary:
The libraries contained in this experiment come from mammary gland epithelial primary whole cells, HMEC isolated from independent donors. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted and DNS normalized Poly-A- RNA > 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from K562 (ENCSR000AEN)

summary:
RNA Evaluation K562 Long Total from Graveley

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from K562 (ENCSR000AEP)

summary:
RNA Evaluation K562 Long Total RNA-seq from Wold

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from K562 (ENCSR000AEO)

summary:
RNA Evaluation K562 Long Poly-A+  from Graveley

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from K562 (ENCSR000AEL)

summary:
The libraries contained in this experiment come from independent growths of cell line K562.  They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.  These data were collected as part of the RNA Evaluation Study.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from GM12878 (ENCSR000AEH)

summary:
RNA Evaluation Gm12878 Long Poly-A+ RNA-seq from Wold

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from GM12878 (ENCSR000AEF)

summary:
RNA Evaluation Gm12878 Long Poly-A+  from Graveley

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from GM12878 (ENCSR000AEC)

summary:
The libraries contained in this experiment come from independent growths of cell line GM12878.  They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.  These data were collected as part of the RNA Evaluation Study.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from GM12878 (ENCSR000AED)

summary:
The libraries contained in this experiment come from independent growths of cell line GM12878.  They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.  These data were collected as part of the RNA Evaluation Study.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from epithelial cell of umbilical artery (ENCSR000AAT)

summary:
CSHL Long RNA Seq HUAEC cell total  (SID38212,SID38213)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from uterine smooth muscle cell (ENCSR000AAV)

summary:
CSHL Long RNA Seq HUtSMC cell total  (SID38216,SID38217)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from smooth muscle cell of the umbilical artery (ENCSR000AAU)

summary:
CSHL Long RNA Seq HUASMC cell total  (SID38214,SID38215)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from tracheal epithelial cell (ENCSR000AAR)

summary:
CSHL Long RNA Seq HTEpC cell total  (SID38208,SID38209)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from lung microvascular endothelial cell (ENCSR000AAP)

summary:
CSHL Long RNA Seq HPMEC cell total  (SID38240,SID38241)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from smooth muscle cell of trachea (ENCSR000AAS)

summary:
CSHL Long RNA Seq HTSMC cell total (SID38503,SID38211)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from K562 (ENCSR000AEQ)

summary:
RNA Evaluation K562 Long Poly-A+ RNA-seq from Wold

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from smooth muscle cell of the pulmonary artery (ENCSR000AAN)

summary:
CSHL Long RNA Seq HPASMC cell total (SID38228, SID38229)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from pulmonary artery endothelial cell (ENCSR000AAM)

summary:
CSHL Long RNA Seq HPAEC cell total  (SID38226,SID38227)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from fibroblast of lung (ENCSR000AAO)

summary:
CSHL Long RNA Seq HPF cell total  (SID38238,SID38239)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from dermis microvascular lymphatic vessel endothelial cell (ENCSR000AAK)

summary:
CSHL Long RNA Seq HDMEC cell total  (SID38195,SID38196)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from dermis lymphatic vessel endothelial cell (ENCSR000AAJ)

summary:
CSHL Long RNA Seq HDLEC cell total  (SID38193,SID38194)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from nasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa (ENCSR000AAL)

summary:
CSHL Long RNA Seq HNEpC cell total  (SID38224,SID38225)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from dermis blood vessel endothelial cell (ENCSR000AAI)

summary:
CSHL Long RNA Seq HDBEC cell total  (SID38204,SID38205)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from regular cardiac myocyte (ENCSR000AAH)

summary:
CSHL Long RNA Seq HCM cell total  (SID38202,SID38203)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from GM12878 (ENCSR000AEG)

summary:
RNA Evaluation Gm12878 Long Total RNA-seq from Wold

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from smooth muscle cell of the coronary artery (ENCSR000AAG)

summary:
CSHL Long RNA Seq HCASMC cell total  (SID38234,SID38235)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from endothelial cell of coronary artery (ENCSR000AAF)

summary:
CSHL Long RNA Seq HCAEC cell total  (SID38232,SID38233)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from GM12878 (ENCSR000AEE)

summary:
RNA Evaluation Gm12878 Long Total from Graveley

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from aortic smooth muscle cell (ENCSR000AAA)

summary:
CSHL Long RNA Seq HAoSMC cell total  (SID38242,SID38243)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from renal cortical epithelial cell (ENCSR000AAQ)

summary:
CSHL Long RNA Seq HRCEpC cell total  (SID38206,SID38207)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from bronchial epithelial cell (ENCSR000AAD)

summary:
CSHL Long RNA Seq HBEpC cell total  (SID38222,SID38223)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR980SWK)

summary:
RNA-seq of a single Purkinje cell from a 14 month old male hybrid Castaneus X C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from lung (ENCSR982MRY)

summary:
Total RNA-Seq on postnatal 0 day mouse lungs

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from lung (ENCSR992WBR)

summary:
RNA-Seq on embryonic 16.5 day mouse lung

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from liver (ENCSR950BNG)

summary:
Total RNA-seq on postnatal 0 day mouse liver (13pgs)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from skeletal muscle tissue (ENCSR946HWC)

summary:
Total RNA-Seq on postnatal 0 day mouse skeletal muscle

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from forebrain (ENCSR970EWM)

summary:
RNA-Seq on embryonic 13.5 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR940DVT)

summary:
RNA-seq of a single Purkinje cell from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from smooth muscle cell of bladder (ENCSR000AAC)

summary:
CSHL Long RNA Seq HBdSMC cell total  (SID38220,SID38221)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR927DHK)

summary:
RNA-seq of a single Purkinje cell from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from hindbrain (ENCSR921PRX)

summary:
RNA-Seq on embryonic 13.5 day mouse hindbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from bladder microvascular endothelial cell (ENCSR000AAB)

summary:
CSHL Long RNA Seq HBdMEC cell total  (SID38244,SID38245)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from thymus (ENCSR907JUN)

summary:
Total RNA-seq on postnatal 0 day mouse thymus (13pgs)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR948NDP)


title: total RNA-seq from neural tube (ENCSR928OXI)

summary:
RNA-seq on embryonic 14.5 day mouse neural tube

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR927IOO)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC763)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from stomach (ENCSR906YQZ)

summary:
RNA-Seq on embryonic 15.5 day mouse stomach

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR909YEQ)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC779)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from NCI-H460 (ENCSR968YZV)

summary:
The libraries contained in this experiment come from cytoplasmic fractions of immortalized cell line NCI-H460 derived from a large cell lung carcinoma of a 37 year old male.  They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted TAP pretreated Total RNA < 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR953TKB)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC775)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from SK-MEL-5 (ENCSR964EPR)

summary:
The libraries contained in this experiment come from nuclear fractions of a malignant melonoma immortalized cell line SK-MEL-5 derived from a metastatic axillary node of a 24 year old female. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted TAP pretreated Total RNA < 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from bronchial smooth muscle cell (ENCSR000AAE)

summary:
CSHL Long RNA Seq HBSMC cell total  (SID38230,SID38231)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from Karpas-422 (ENCSR905KHW)

summary:
The libraries contained in this experiment come from independent growths of cell line, Karpas-422. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR905FLM)


title: total RNA-seq from Purkinje cell (ENCSR900JSG)

summary:
RNA-seq on 30 cell pools of excised Purkinje cells from a 6 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from hindbrain (ENCSR861FGB)

summary:
Total RNA-seq on postnatal 0 day mouse hindbrain (13pgs)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from intestine (ENCSR848GST)

summary:
RNA-Seq on embryonic 16.5 day mouse intestine

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR846FYI)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC767)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from limb (ENCSR830IVQ)

summary:
RNA-Seq on embryonic 15.5 day mouse limb

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from embryonic facial prominence (ENCSR848HOX)

summary:
RNA-seq on embryonic 11.5 day mouse embryonic facial prominence

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR921DSM)

summary:
RNA-seq of a single Purkinje cell from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from liver (ENCSR867YNV)

summary:
RNA-seq on embryonic 14.5 day mouse liver

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR833SOQ)

summary:
RNA-seq of a single Purkinje cell from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from neural progenitor cell (ENCSR828LSC)

summary:
The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR828FPS)


title: total RNA-seq from embryonic facial prominence (ENCSR823VEE)

summary:
RNA-seq on embryonic 14.5 day mouse embryonic facial prominence

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: polyA mRNA RNA-seq from K562 (ENCSR000AEM)

summary:
The libraries contained in this experiment come from independent growths of cell line K562.  They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.  These data were collected as part of the RNA Evaluation Study.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from HT-29 (ENCSR807KQN)

summary:
The libraries contained in this experiment come from independent growths of cell line, HT-29. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from cerebellar granule layer (ENCSR814JMM)

summary:
RNA-seq on a dissected area of granule cells from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR796QJD)

summary:
RNA-seq of a single Purkinje cell from a 14 month old male hybrid Castaneus X C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR803PLZ)


title: total RNA-seq from midbrain (ENCSR792RJV)

summary:
RNA-Seq on embryonic 13.5 day mouse midbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR789RPP)


title: single cell RNA-seq from Purkinje cell (ENCSR888LYA)

summary:
RNA-seq on single cell equivalents of 20 excised and homogenized Purkinje cells from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from liver (ENCSR826HIQ)

summary:
RNA-Seq on embryonic 16.5 day mouse liver

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from bladder (ENCSR772FQU)

summary:
Total RNA-Seq on postnatal 0 day mouse bladder

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR775HGC)


title: single cell RNA-seq from pyramidal neuron (ENCSR782WIL)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC771)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from GM12878 (ENCSR767SOH)

summary:
RNA-seq of a single GM12878 cell

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR758TAD)

summary:
RNA-seq on a 50 cell pool of Purkinje cells from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from HT1080 (ENCSR855CYO)

summary:
The libraries contained in this experiment come from nuclear fractions of a fibrosarcoma immortalized cell line HT1080 derived from the connective tissue from a 35 year old male. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted TAP pretreated RNA < 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from hindbrain (ENCSR760TOE)

summary:
RNA-seq on embryonic 11.5 day mouse hindbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from OCI-LY7 (ENCSR740DKM)

summary:
The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR746LUP)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC758)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from adrenal gland (ENCSR739PEB)

summary:
RNA-seq on postnatal 0 day mouse adrenal glands

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR739YUO)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC762)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR729ENB)

summary:
RNA-seq of a single Purkinje cell from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR726VVO)


title: single cell RNA-seq from Purkinje cell (ENCSR724XFQ)


title: small RNA-seq from induced pluripotent stem cell (ENCSR722POQ)

summary:
The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR710QXP)

summary:
RNA-seq of a single Purkinje cell from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from midbrain (ENCSR719NAJ)

summary:
Total RNA-Seq on postnatal 0 day mouse midbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR708EHJ)


title: single cell RNA-seq from Purkinje cell (ENCSR691PPV)


title: total RNA-seq from heart (ENCSR691OPQ)

summary:
RNA-seq on embryonic 11.5 day mouse heart

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR672QFA)


title: small RNA-seq from hepatocyte (ENCSR673PND)

summary:
The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from neural tube (ENCSR667TOX)

summary:
Total RNA-Seq on postnatal 0 day mouse neural tube

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from melanocyte of skin (ENCSR000CUR)

summary:
RNA-seq on human skin melanocytes primary whole cells (NHEM-M2) rRNA-depleted Total RNA greater than 200 nucleotides in size. (paired end)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from forebrain (ENCSR752RGN)

summary:
RNA-Seq on embryonic 15.5 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR650MMK)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC780)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR659QHV)


title: total RNA-seq from embryonic facial prominence (ENCSR636CWO)

summary:
RNA-Seq on embryonic 15.5 day mouse cranio-facial prominence

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR637NLF)

summary:
RNA-seq on single cell equivalents of 20 excised and homogenized Purkinje cells from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from intestine (ENCSR932TRU)

summary:
RNA-seq on embryonic 14.5 day mouse intestine

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR734SOQ)

summary:
LC_805-819_C57Bl6_layer_V_pyramidal_neuron_pool-split

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from GM12878 (ENCSR625DPZ)

summary:
RNA-seq of a single GM12878 cell

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from SK-N-DZ (ENCSR626WAX)

summary:
The libraries contained in this experiment come from nuclear fractions of a neuroblastoma immortalized cell line SK-N-DZ derived from a metastatic site in the bone marrow of a 2 year old female. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted TAP pretreated Total RNA < 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from GM12878 (ENCSR673UIY)

summary:
RNA-seq on single cell equivalents of 10 isolated and homogenized GM12878 cells

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

relation:
Supersedes: GSM1299396
Supersedes: GSM1299397
Supersedes: GSM1299398
Supersedes: GSM1299395
Supersedes: GSM1299391
Supersedes: GSM1299394
Supersedes: GSM1299393
Supersedes: GSM1299390
Supersedes: GSM1299389


title: single cell RNA-seq from Purkinje cell (ENCSR659SFM)


title: single cell RNA-seq from Purkinje cell (ENCSR620HJQ)

summary:
RNA-seq on single cell equivalents of 13 excised and homogenized Purkinje cells from a 14 month old male hybrid Castaneus X C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from SK-N-DZ (ENCSR610CDO)

summary:
The libraries contained in this experiment come from cytoplasmic fractions of a neuroblastoma immortalized cell line SK-N-DZ derived from a metastatic site in the bone marrow of a 2 year old female. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted TAP pretreated Total RNA < 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from liver (ENCSR592MSV)

summary:
Total RNA-seq on embryonic 11.5 day mouse liver

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from liver (ENCSR611PTP)

summary:
RNA-Seq on embryonic 15.5 day mouse liver

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from heart (ENCSR597UZW)

summary:
RNA-Seq on embryonic 15.5 day mouse heart

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from bipolar spindle neuron (ENCSR603RPC)

summary:
The libraries contained in this experiment come from independent growths of bipolar neurons that were differentiated from induced pluripotent stem cells. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR610BAM)

summary:
RNA-seq of a single Purkinje cell from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from spleen (ENCSR579FCW)

summary:
RNA-seq on postnatal 0 day mouse spleen

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR662UPQ)

summary:
RNA-seq of a single Purkinje cell from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR561KFF)


title: total RNA-seq from hindbrain (ENCSR559TRB)

summary:
RNA-seq on embryonic 14.5 day mouse hindbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR558LHB)


title: total RNA-seq from limb (ENCSR541XZK)

summary:
RNA-seq on embryonic 11.5 day mouse limb

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from SK-MEL-5 (ENCSR571FTT)

summary:
The libraries contained in this experiment come from cytoplasmic fractions of a malignant melonoma immortalized cell line SK-MEL-5 derived from a metastatic axillary node of a 24 year old female. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted TAP pretreated Total RNA < 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR577ONT)

summary:
RNA-seq of a single Purkinje cell from a 14 month old male hybrid Castaneus X C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR559QTE)


title: total RNA-seq from kidney (ENCSR537GNQ)

summary:
RNA-Seq on embryonic 16.5 day mouse kidney

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from midbrain (ENCSR557RMA)

summary:
RNA-Seq on embryonic 15.5 day mouse midbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR530UXI)


title: total RNA-seq from embryonic facial prominence (ENCSR538WYL)

summary:
RNA-Seq on embryonic 13.5 day mouse cranio-facial prominence

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from forebrain (ENCSR527RFK)

summary:
Total RNA-seq on postnatal 0 day mouse forebrain (13pgs)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR527DQV)


title: total RNA-seq from heart (ENCSR727FHP)

summary:
RNA-seq on embryonic 14.5 day mouse heart

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from heart (ENCSR526SEX)

summary:
RNA-Seq on postnatal 0 day mouse heart

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR521YLY)


title: single cell RNA-seq from heart (ENCSR510ADJ)

summary:
Total RNA-seq on postnatal 0 day mouse heart (13pg)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from stomach (ENCSR466KZY)

summary:
RNA-Seq on embryonic 16.5 day mouse stomach

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from fibroblast of arm (ENCSR489KNQ)

summary:
The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR474NEW)


title: single cell RNA-seq from Purkinje cell (ENCSR435ROA)


title: total RNA-seq from liver (ENCSR448MXQ)

summary:
RNA-Seq on embryonic 13.5 day mouse liver

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from thymus (ENCSR438XCG)

summary:
Total RNA-Seq on postnatal 0 day mouse thymus

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR417EDR)

summary:
RNA-seq of a single Purkinje cell from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal cell (ENCSR423XRG)

summary:
RNA-seq on 30 cell pools of excised pyramidal cells from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from cerebellar granule cell (ENCSR415JJO)

summary:
RNA-seq on excised cerebellar granule cells from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR427FOY)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC768)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR390KQJ)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC769)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from hindbrain (ENCSR401BSG)

summary:
RNA-Seq on embryonic 15.5 day mouse hindbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from A375 (ENCSR376XXO)

summary:
The libraries contained in this experiment come from independent growths of cell line, A375. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from induced pluripotent stem cell (ENCSR368QPC)

summary:
Total RNA-seq on PGP human IPS cells (13pgs)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from intestine (ENCSR370SFB)

summary:
RNA-Seq on embryonic 15.5 day mouse intestine

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from midbrain (ENCSR367ZPZ)

summary:
RNA-Seq on embryonic 16.5 day mouse midbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from kidney (ENCSR504GEG)

summary:
RNA-seq on embryonic 14.5 day mouse kidney

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR367DUL)

summary:
RNA-seq of a single Purkinje cell from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR366QZI)


title: total RNA-seq from forebrain (ENCSR362AIZ)

summary:
Total RNA-Seq on postnatal 0 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from limb (ENCSR347SQR)

summary:
RNA-Seq on embryonic 13.5 day mouse limb

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR362OYV)

summary:
RNA-seq of a single Purkinje cell from a 14 month old male hybrid Castaneus X C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from midbrain (ENCSR343YLB)

summary:
RNA-seq on embryonic 14.5 day mouse midbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR323FHJ)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC773)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from neural tube (ENCSR337FYI)

summary:
RNA-seq on embryonic 11.5 day mouse neural tube

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR351YGY)


title: total RNA-seq from lung (ENCSR457RRW)

summary:
RNA-Seq on embryonic 15.5 day mouse lung

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from cerebellar granule cell (ENCSR313IUO)

summary:
RNA-seq on excised cerebellar granule cells from a 6 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR316RMA)


title: single cell RNA-seq from Purkinje cell (ENCSR320PXZ)


title: total RNA-seq from midbrain (ENCSR307BCA)

summary:
RNA-seq on embryonic 11.5 day mouse midbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from intestine (ENCSR331XCE)

summary:
Total RNA-Seq on postnatal 0 day mouse intestine

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR376KFF)

summary:
RNA-seq of a single Purkinje cell from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from heart (ENCSR284YKY)

summary:
RNA-Seq on embryonic 13.5 day mouse heart

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR282DYQ)


title: single cell RNA-seq from Purkinje cell (ENCSR268IGT)


title: single cell RNA-seq from Purkinje cell (ENCSR292IVH)


title: total RNA-seq from hindbrain (ENCSR285WZV)

summary:
RNA-Seq on embryonic 16.5 day mouse hindbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from stomach (ENCSR290RRR)

summary:
RNA-seq on embryonic 14.5 day mouse stomach

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR267LBO)


title: total RNA-seq from liver (ENCSR284AMY)

summary:
Total RNA-seq on 10ng of embryonic 11.5 day mouse liver

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR295UJP)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC774)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from smooth muscle cell (ENCSR250STJ)

summary:
The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway. They are stranded SE101 length Hi-Seq reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR244DNF)


title: single cell RNA-seq from skeletal muscle tissue (ENCSR265YFZ)

summary:
Total RNA-seq on postnatal 0 day mouse skeletal muscle (13pgs)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR268AXN)

summary:
RNA-seq on a 50 cell pool of layer V pyramidal neurons from an 8 month old male wild type C57Bl5 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from cerebral cortex, layer 5 (ENCSR236EGS)

summary:
RNA-seq on a dissected area of layer V from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from bipolar spindle neuron (ENCSR225BBK)

summary:
Total RNA-seq on PGP human bipolar spindle neurons (13pgs)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR220HFQ)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC776)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR231WUP)


title: total RNA-seq from limb (ENCSR216NEG)

summary:
RNA-seq on embryonic 14.5 day mouse limb

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from NCI-H460 (ENCSR211PJW)

summary:
The libraries contained in this experiment come from nuclear fractions of immortalized cell line NCI-H460 derived from a large cell lung carcinoma of a 37 year old male.  They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted TAP pretreated Total RNA < 200 nucleotides in size.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from forebrain (ENCSR185LWM)

summary:
RNA-seq on embryonic 14.5 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from GM12878 (ENCSR184CWK)

summary:
RNA-seq of a single GM12878 cell

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from stomach (ENCSR178GUS)

summary:
Total RNA-Seq on postnatal 0 day mouse stomach

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR298YHA)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC777)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR194TNV)

summary:
RNA-seq of a single Purkinje cell from a 14 month old male hybrid Castaneus X C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR195BCE)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC772)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from kidney (ENCSR173PJN)

summary:
RNA-seq on postnatal 0 day mouse kidney

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal neuron (ENCSR198EIH)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC759)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR167AWS)

summary:
RNA-seq of a single Purkinje cell from an 8 month old male wild type C57Bl6 mouse

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR157NLF)

summary:
RNA-seq on 30 cell pools of excised Purkinje cells from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from forebrain (ENCSR160IIN)

summary:
Total RNA-seq on 10ng of embryonic 11.5 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR145EKP)


title: single cell RNA-seq from pyramidal neuron (ENCSR138VRG)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC770)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from pyramidal cell (ENCSR137RHZ)

summary:
RNA-seq on 30 cell pools of excised pyramidal cells from a 27 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from neural tube (ENCSR115TWD)

summary:
RNA-Seq on embryonic 13.5 day mouse neural tube

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR111QQX)


title: single cell RNA-seq from Purkinje cell (ENCSR101GVL)

summary:
RNA-seq of a single Purkinje cell from a 20 year old human male

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from liver (ENCSR096STK)

summary:
RNA-seq on mouse liver

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR086PHI)


title: single cell RNA-seq from Purkinje cell (ENCSR124ERY)


title: single cell RNA-seq from Purkinje cell (ENCSR027CXR)


title: total RNA-seq from lung (ENCSR039ADS)

summary:
RNA-seq on embryonic 14.5 day mouse lung

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from kidney (ENCSR062VTB)

summary:
RNA-Seq on embryonic 15.5 day mouse kidney

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from forebrain (ENCSR080EVZ)

summary:
RNA-Seq on embryonic 16.5 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from Purkinje cell (ENCSR068SJG)


title: single cell RNA-seq from midbrain (ENCSR026ZRP)

summary:
Total RNA-seq on postnatal 0 day mouse midbrain (13pgs)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from heart (ENCSR020DGG)

summary:
RNA-Seq on embryonic 16.5 day mouse heart

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from hindbrain (ENCSR017JEG)

summary:
Total RNA-Seq on postnatal 0 day mouse hindbrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: total RNA-seq from neural tube (ENCSR004XCU)

summary:
RNA-Seq on embryonic 15.5 day mouse neural tube

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from forebrain (ENCSR000OXO)

summary:
Total RNA-seq on embryonic 11.5 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from GM12878 (ENCSR000AJE)

summary:
RNA-seq of a single GM12878 cell

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from GM12878 (ENCSR000AJH)


title: single cell RNA-seq from GM12878 (ENCSR000AJC)


title: single cell RNA-seq from GM12878 (ENCSR000AJB)


title: single cell RNA-seq from GM12878 (ENCSR000AJA)


title: single cell RNA-seq from GM12878 (ENCSR000AJF)


title: single cell RNA-seq from pyramidal neuron (ENCSR100KRK)

summary:
RNA-seq of a single pyramidal neuron cell from cerebral cortex layer V in a C57Bl6 mouse (LC761)

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from temporal lobe (ENCSR000AGD)

summary:
The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from skin of body (ENCSR000AGA)

summary:
The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from thyroid gland (ENCSR000AGE)

summary:
The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from uterus (ENCSR000AGH)

summary:
The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from tongue (ENCSR000AGF)

summary:
The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from spinal cord (ENCSR000AGB)

summary:
The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: single cell RNA-seq from GM12878 (ENCSR000AIY)


title: small RNA-seq from skeletal muscle tissue (ENCSR000AFZ)

summary:
The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from liver (ENCSR000AFV)

summary:
The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from parietal lobe (ENCSR000AFY)

summary:
The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf


title: small RNA-seq from occipital lobe (ENCSR000AFX)

summary:
The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf