title: Renal cell carcinoma: rccc-6, tumor 2 (part 1 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=7
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624245 reuse=3 date=16-Feb-2000


title: Renal cell carcinoma: rccc-8, tumor 2 (part 2 of 2)

status: Public on Jul 19 2001

type: RNA

city: Heidelberg

first: Wolfgang

last: Huber

address: Im Neuenheimer Feld 280

department: Molecular Genome Analysis

country: Germany

institute: German Cancer Research Center

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=NA
died=NA
tumorsize.cm=10
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180224 reuse=6 date=05-Aug-1999

molecule: total RNA

organism: Homo sapiens

source_name: renal clear cell carcinoma (primary tumor)


title: Renal cell carcinoma: rccc-7, normal 1 (part 2 of 2)

description:
sex=f
age=70
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625258 reuse=2 date=14-Dec-1999

source_name: normal kidney tissue (as reference)


title: Renal cell carcinoma: rccc-7, normal 2 (part 1 of 2)

description:
sex=f
age=70
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624253 reuse=3 date=17-Feb-2000


title: Renal cell carcinoma: rccc-8, tumor 1 (part 2 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=NA
died=NA
tumorsize.cm=10
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180223 reuse=5 date=21-May-1999


title: Renal cell carcinoma: rccc-8, normal 1 (part 1 of 2)

description:
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180164 reuse=5 date=21-May-1999


title: Renal cell carcinoma: rccc-6, normal 2 (part 2 of 2)

description:
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625257 reuse=3 date=16-Feb-2000


title: Renal cell carcinoma: rccc-7, tumor 1 (part 1 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4
sex=f
age=70
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624253 reuse=2 date=14-Dec-1999


title: Renal cell carcinoma: rccc-6, tumor 1 (part 1 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=7
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624246 reuse=2 date=14-Dec-1999


title: Renal cell carcinoma: rccc-8, tumor 2 (part 1 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=NA
died=NA
tumorsize.cm=10
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180164 reuse=6 date=05-Aug-1999


title: Renal cell carcinoma: rccc-6, normal 2 (part 1 of 2)

description:
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624246 reuse=3 date=16-Feb-2000


title: Renal cell carcinoma: rccc-8, tumor 1 (part 1 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=NA
died=NA
tumorsize.cm=10
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180163 reuse=5 date=21-May-1999


title: Renal cell carcinoma: rccc-6, tumor 2 (part 2 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=7
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625263 reuse=3 date=16-Feb-2000


title: Renal cell carcinoma: rccc-6, tumor 1 (part 2 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=7
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625257 reuse=2 date=14-Dec-1999


title: Renal cell carcinoma: rccc-7, tumor 1 (part 2 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4
sex=f
age=70
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625259 reuse=2 date=14-Dec-1999


title: Renal cell carcinoma: rccc-8, normal 1 (part 2 of 2)

description:
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180224 reuse=5 date=21-May-1999


title: Renal cell carcinoma: rccc-7, normal 1 (part 1 of 2)

description:
sex=f
age=70
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624252 reuse=2 date=14-Dec-1999


title: Renal cell carcinoma: rccc-6, normal 1 (part 2 of 2)

description:
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625263 reuse=2 date=14-Dec-1999


title: Renal cell carcinoma: rccc-5, tumor 2 (part 2 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=42
died=FALSE
tumorsize.cm=3
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180226 reuse=8 date=05-Aug-1999


title: Renal cell carcinoma: rccc-4, normal 2 (part 1 of 2)

description:
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625217 reuse=5 date=15-Mar-2000


title: Renal cell carcinoma: rccc-6, normal 1 (part 1 of 2)

description:
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624245 reuse=2 date=14-Dec-1999


title: Renal cell carcinoma: rccc-5, tumor 2 (part 1 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=42
died=FALSE
tumorsize.cm=3
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180166 reuse=6 date=05-Aug-1999


title: Renal cell carcinoma: rccc-5, tumor 1 (part 1 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=42
died=FALSE
tumorsize.cm=3
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180165 reuse=5 date=21-May-1999


title: Renal cell carcinoma: rccc-4, tumor 1 (part 1 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4.5
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625217 reuse=4 date=13-Jan-2000


title: Renal cell carcinoma: rccc-3, normal 2 (part 1 of 2)

description:
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180164 reuse=4 date=02-Apr-1999


title: Renal cell carcinoma: rccc-5, normal 2 (part 1 of 2)

description:
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180165 reuse=6 date=05-Aug-1999


title: Renal cell carcinoma: rccc-5, tumor 1 (part 2 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=42
died=FALSE
tumorsize.cm=3
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180225 reuse=5 date=21-May-1999


title: Renal cell carcinoma: rccc-4, normal 2 (part 2 of 2)

description:
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3626216 reuse=3 date=15-Mar-2000


title: Renal cell carcinoma: rccc-3, normal 1 (part 2 of 2)

description:
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180223 reuse=3 date=16-Jan-1999


title: Renal cell carcinoma: rccc-4, tumor 1 (part 2 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4.5
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3626216 reuse=2 date=13-Jan-2000


title: Renal cell carcinoma: rccc-4, normal 1 (part 1 of 2)

description:
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625212 reuse=4 date=13-Jan-2000


title: Renal cell carcinoma: rccc-4, normal 1 (part 2 of 2)

description:
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3626213 reuse=2 date=13-Jan-2000


title: Renal cell carcinoma: rccc-3, tumor 1 (part 2 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=21
died=FALSE
tumorsize.cm=3.5
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180224 reuse=3 date=16-Jan-1999


title: Renal cell carcinoma: rccc-3, tumor 2 (part 2 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=21
died=FALSE
tumorsize.cm=3.5
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180223 reuse=4 date=19-Apr-1999


title: Renal cell carcinoma: rccc-4, tumor 2 (part 2 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4.5
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3626213 reuse=3 date=15-Mar-2000


title: Renal cell carcinoma: rccc-3, tumor 2 (part 1 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=21
died=FALSE
tumorsize.cm=3.5
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180163 reuse=4 date=19-Apr-1999


title: Renal cell carcinoma: rccc-5, normal 1 (part 1 of 2)

description:
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180166 reuse=5 date=21-May-1999


title: Renal cell carcinoma: rccc-2, tumor 2 (part 1 of 2)

description:
clinical.stage=IV
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=30
died=FALSE
tumorsize.cm=4
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180165 reuse=4 date=02-Apr-1999


title: Renal cell carcinoma: rccc-5, normal 1 (part 2 of 2)

description:
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180226 reuse=5 date=21-May-1999


title: Renal cell carcinoma: rccc-3, tumor 1 (part 1 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=21
died=FALSE
tumorsize.cm=3.5
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180164 reuse=3 date=16-Jan-1999


title: Renal cell carcinoma: rccc-3, normal 1 (part 1 of 2)

description:
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180163 reuse=3 date=16-Jan-1999


title: Renal cell carcinoma: rccc-2, normal 2 (part 1 of 2)

description:
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180166 reuse=4 date=02-Apr-1999


title: Renal cell carcinoma: rccc-4, tumor 2 (part 1 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4.5
sex=m
age=72
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625212 reuse=5 date=15-Mar-2000


title: Renal cell carcinoma: rccc-5, normal 2 (part 2 of 2)

description:
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180225 reuse=6 date=05-Aug-1999


title: Renal cell carcinoma: rccc-2, tumor 2 (part 2 of 2)

description:
clinical.stage=IV
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=30
died=FALSE
tumorsize.cm=4
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180225 reuse=4 date=02-Apr-1999


title: Renal cell carcinoma: rccc-2, tumor 1 (part 1 of 2)

description:
clinical.stage=IV
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=30
died=FALSE
tumorsize.cm=4
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180166 reuse=3 date=16-Jan-1999


title: Renal cell carcinoma: rccc-1, tumor 2 (part 1 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=16
died=FALSE
tumorsize.cm=6
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624248 reuse=3 date=23-Feb-2000


title: Renal cell carcinoma: rccc-2, tumor 1 (part 2 of 2)

description:
clinical.stage=IV
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=30
died=FALSE
tumorsize.cm=4
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180226 reuse=3 date=16-Jan-1999


title: cerebellargenexpdata_P07

status: Public on Apr 26 2001

city: Wako-shi

first: Yoshihiro

last: Kagami

state: Saitama

address: 2-1 Hirosawa

country: Japan

institute: RIKEN Brain Science Institute

description:
Gene expression profile in developing mouse cerebellum at postnatal day 7. Mean signal from two array experiments are given.
This study was performed in order to assist in the understanding of the genetic basis of
cerebellar development in mice.  E18-, P14-, P21-, and P56- data are shown in GSM50, GSM52, GSM53, and GSM54, respectively.

organism: Mus musculus

source_name: cerebellum


title: cerebellargenexpdata_E18

description:
Gene expression profile in developing mouse cerebellum at embryonic day 18.  Mean signal from two array experiments are given.
This study was performed in order to assist in the understanding of the genetic basis of
cerebellar development in mice.  P7-, P14-, P21-, and P56- data are shown in GSM51, GSM52, GSM53, and GSM54, respectively.


title: Renal cell carcinoma: rccc-2, normal 2 (part 2 of 2)

description:
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180226 reuse=4 date=02-Apr-1999


title: cerebellargenexpdata_P56

description:
Gene expression profile in developing mouse cerebellum at postnatal day 56. Mean signal from two array experiments are given.
This study was performed in order to assist in the understanding of the genetic basis of
cerebellar development in mice.  E18-, P7-, P14-, and P21- data are shown in GSM50, GSM51, GSM52, and GSM53, respectively.


title: cerebellargenexpdata_P14

description:
Gene expression profile in developing mouse cerebellum at postnatal day 14. Mean signal from two array experiments are given.
This study was performed in order to assist in the understanding of the genetic basis of
cerebellar development in mice.  E18-, P7-, P21-, and P56- data are shown in GSM50, GSM51, GSM53, and GSM54, respectively.


title: Renal cell carcinoma: rccc-2, normal 1 (part 1 of 2)

description:
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180165 reuse=3 date=16-Jan-1999


title: Renal cell carcinoma: rccc-1, normal 2 (part 1 of 2)

description:
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624249 reuse=3 date=23-Feb-2000


title: Renal cell carcinoma: rccc-1, normal 1 (part 1 of 2)

description:
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624248 reuse=2 date=11-Dec-1999


title: cerebellargenexpdata_P21

description:
Gene expression profile in developing mouse cerebellum at postnatal day 21. Mean signal from two array experiments are given.
This study was performed in order to assist in the understanding of the genetic basis of
cerebellar development in mice.  E18-, P7-, P14-, and P56- data are shown in GSM50, GSM51, GSM52, and GSM54, respectively.


title: Renal cell carcinoma: rccc-1, normal 2 (part 2 of 2)

description:
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625254 reuse=3 date=23-Feb-2000


title: NHGRI_UACC-903

status: Public on Jan 24 2001

city: Bethesda

first: Michael

last: Bittner

state: MD

department: Cancer Genetics Branch

country: USA

institute: NHGRI, NIH

description:
Biopsy location: back
Patient sex: male
Patient age: 25
Passage number: 14
p16 mutation status: deleted
Invasive ability: 3.8 +/- 0.3%
Vasculogenic mimicry: +
Gel contraction: -
Cell motility: ND
Scratch wound (%): 91

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, back


title: NHGRI_UACC-827

description:
Biopsy location: right breast
Patient sex: female
Patient age: 32
Passage number: 16
p16 mutation status: mutation
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): 32

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, breast


title: Renal cell carcinoma: rccc-1, tumor 1 (part 1 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=16
died=FALSE
tumorsize.cm=6
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624249 reuse=2 date=11-Dec-1999


title: NHGRI_UACC-3149

description:
See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: adenocarcinoma, ovary


title: NHGRI_UACC-2534

description:
Biopsy location: adbomen
Patient sex: male
Patient age: 68
Passage number: 7
p16 mutation status: deleted
Invasive ability: 3.2 +/- 0.02%
Vasculogenic mimicry: -
Gel contraction: ND
Cell motility: ND
Scratch wound (%): 7

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, abdomen


title: NHGRI_UACC-2873

description:
Biopsy location: axillary lymph node
Patient sex: male
Patient age: 37
Passage number: 5
p16 mutation status: ND
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): 48

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, lymph node


title: NHGRI_UACC-1097

description:
Biopsy location: rectus muscle
Patient sex: male
Patient age: 56
Passage number: 6
p16 mutation status: mutation
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): 34

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, muscle


title: NHGRI_UACC-647

description:
Biopsy location: axillary lymph node
Patient sex: male
Patient age: 32
Passage number: 14
p16 mutation status: WT
Invasive ability: 3.8 +/- 0.1%
Vasculogenic mimicry: +
Gel contraction: +/-
Cell motility: ND
Scratch wound (%): 55

Form extensive cord-like networks by 5 days.
See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html
Keywords = melanoma, lymph node


title: NHGRI_UACC-1022

description:
Biopsy location: chest wall
Patient sex: female
Patient age: 53
Passage number: 13
p16 mutation status: WT
Invasive ability: 2.9 +/- 0.1%
Vasculogenic mimicry: -
Gel contraction: -
Cell motility: MD
Scratch wound (%): 63

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, chest


title: NHGRI_TD-1730

description:
Biopsy location: thyroid
Patient sex: male
Patient age: 55
Passage number: biopsy
p16 mutation status: ND
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): ND

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, thyroid


title: NHGRI_UACC-091

description:
Biopsy location: unknown
Patient sex: male
Patient age: 52
Passage number: 7
p16 mutation status: deleted
Invasive ability: 2.1 +/- 0.2%
Vasculogenic mimicry: -
Gel contraction: -
Cell motility: ND
Scratch wound (%): 11

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, unknown


title: NHGRI_UACC-457

description:
Biopsy location: unknown
Patient sex: female
Patient age: unknown
Passage number: 19
p16 mutation status: WT
Invasive ability: 3.1 +/- 0.2%
Vasculogenic mimicry: -
Gel contraction: ND
Cell motility: 12.80 +/- 0.05
Scratch wound (%): ND

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma


title: NHGRI_UACC-1256

description:
Biopsy location: femoral lymph node
Patient sex: female
Patient age: 67
Passage number: 9
p16 mutation status: deleted
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): ND

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html


title: NHGRI_UACC-930

description:
Biopsy location: small intestine
Patient sex: female
Patient age: 35
Passage number: 4
p16 mutation status: WT
Invasive ability: 4.8 +/- 0.3%
Vasculogenic mimicry: +/-
Gel contraction: -
Cell motility: ND
Scratch wound (%): 50

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, small intestine


title: NHGRI_TD-1638

description:
Biopsy location: paraspinous
Patient sex: male
Patient age: 49
Passage number: biopsy
p16 mutation status: ND
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): ND

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, paraspinous


title: NHGRI_TD-1720

description:
Biopsy location: shoulder
Patient sex: male
Patient age: 29
Passage number: biopsy
p16 mutation status: ND
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): ND

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, shoulder


title: NHGRI_TC-1376

description:
Biopsy location: distal ileum
Patient sex: male
Patient age: 30
Passage number: 3
p16 mutation status: ND
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): 21

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, ileum


title: NHGRI_TD-1376

description:
Biopsy location: distal ileum
Patient sex: male
Patient age: 30
Passage number: biopsy
p16 mutation status: ND
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): ND

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html


title: NHGRI_TC-F027

description:
Biopsy location: right chest wall
Patient sex: male
Patient age: 30
Passage number: 6
p16 mutation status: ND
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: ND
Scratch wound (%): 91

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html


title: NHGRI_UACC-1012

description:
Biopsy location: neck
Patient sex: male
Patient age: 54
Passage number: 3
p16 mutation status: ND
Invasive ability: 4.9 +/- 0.1%
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: 122.00 +/- 11.30
Scratch wound (%): 54

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, neck


title: Renal cell carcinoma: rccc-3, normal 2 (part 2 of 2)

description:
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180224 reuse=4 date=02-Apr-1999

source_name: normal kidney tissue (as reference)


title: NHGRI_UACC-502

description:
Biopsy location: cervical lymph node
Patient sex: male
Patient age: 69
Passage number: 3
p16 mutation status: deleted
Invasive ability: 2.8 +/- 0.1%
Vasculogenic mimicry: -
Gel contraction: ND
Cell motility: ND
Scratch wound (%): 37

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html


title: NHGRI_UACC-383

description:
Biopsy location: femoral lymph node
Patient sex: male
Patient age: 69
Passage number: 29
p16 mutation status: deleted
Invasive ability: 2.3 +/- 0.2%
Vasculogenic mimicry: -
Gel contraction: ND
Cell motility: 70.40 +/- 5.27
Scratch wound (%): 35

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html


title: NHGRI_TD-1348


title: male a

status: Public on Oct 18 2000

first: Brian

last: Oliver

address: 50 South Drive

department: LBG

institute: NIDDK, NIH

description:
Whole adult male minus gonads (12-24 hours post-eclosion) Drosophila melanogaster of the genotype y w[67c1]
Keywords = soma, male, sex

organism: Drosophila melanogaster

source_name: y w[67c1]/Y male


title: testis a

description:
Testis dissected from adult (12-24 hours post-eclosion) Drosophila melanogaster of the genotype y w[67c1].
Keywords = gonad, male, sex

source_name: y w[67c1]/Y testis


title: male b


title: female a

description:
Whole adult female minus gonads (12-24 hours post-eclosion) Drosophila melanogaster of the genotype y w[67c1].
Keywords = soma, female, sex

source_name: y w[67c1] female


title: ovary a

description:
Dissected from adult (12-24 hours post-eclosion) Drosophila melanogaster of the genotype y w[67c1].
Keywords = gonad, female, sex

source_name: y w[67c1] ovary


title: NHGRI_NilC

description:
See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: fibroblast


title: NHGRI_M93-007

description:
Biopsy location: ankle
Patient sex: female
Patient age: 43
Passage number: 3
p16 mutation status: deleted
Invasive ability: 2.6 +/- 0.1%
Vasculogenic mimicry: -
Gel contraction: -
Cell motility: ND
Scratch wound (%): 12

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, ankle


title: NHGRI_M93-047

description:
Biopsy location: axillary lymph node
Patient sex: female
Patient age: 75
Passage number: 3
p16 mutation status: mutation
Invasive ability: 10.7 +/- 0.03%
Vasculogenic mimicry: +
Gel contraction: +
Cell motility: ND
Scratch wound (%): 75

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, lymph node


title: NHGRI_RMS-13

source_name: rhabdomyosarcoma


title: NHGRI_SRS-3

source_name: unknown


title: NHGRI_MCF-10A

source_name: epithelium, breast


title: NHGRI_CRL-1634


title: NHGRI_HA-A

description:
Biopsy location: unknown
Patient sex: female
Patient age: unknown
Passage number: 19
p16 mutation status: ND
Invasive ability: 3.9 +/- 0.5%
Vasculogenic mimicry: +
Gel contraction: -
Cell motility: 211.00 +/- 12.40
Scratch wound (%): 62

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma


title: NHGRI_M91-054

description:
Biopsy location: axillary lymph node metastasis
Patient sex: male
Patient age: 45
Passage number: 3
p16 mutation status: WT
Invasive ability: ND
Vasculogenic mimicry: + #
Gel contraction: + #
Cell motility: ND
Scratch wound (%): 30% #

# Mixed epithelioid and fibroblastic phenotypes.
Vasculogenic mimicry and gel contraction only in epithelioid phenotype.
Scratch assay results same for both phenotypes.

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html


title: NHGRI_A-357

description:
Biopsy location: skin
Patient sex: 54
Patient age: female
Passage number: ND
p16 mutation status: mutation
Invasive ability: 2.8 +/- 0.2%
Vasculogenic mimicry: -
Gel contraction: ND
Cell motility: 67.80 +/- 4.40
Scratch wound (%): 26

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html

source_name: melanoma, skin


title: Renal cell carcinoma: rccc-9, tumor 1 (part 1 of 2)

description:
clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=7.5
sex=f
age=59
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625210 reuse=4 date=13-Jan-2000

source_name: renal clear cell carcinoma (primary tumor)


title: Renal cell carcinoma: rccc-1, tumor 2 (part 2 of 2)

description:
clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=16
died=FALSE
tumorsize.cm=6
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625253 reuse=3 date=23-Feb-2000


title: Renal cell carcinoma: rccc-1, normal 1 (part 2 of 2)

description:
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625253 reuse=2 date=11-Dec-1999


title: NHGRI_UACC-3093

description:
Biopsy location: axillary lymph node
Patient sex: male
Patient age: 75
Passage number: 4
p16 mutation status: WT
Invasive ability: ND
Vasculogenic mimicry: ND
Gel contraction: ND
Cell motility: 40.30 +/- 2.00
Scratch wound (%): 24

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html


title: NHGRI_M92-001

description:
Biopsy location: ankle
Patient sex: female
Patient age: 43
Passage number: 2
p16 mutation status: deleted
Invasive ability: 3.0 +/- 0.5%
Vasculogenic mimicry: -
Gel contraction: ND
Cell motility: 76.80 +/- 2.96
Scratch wound (%): 22

See http://www.nhgri.nih.gov/DIR/Microarray/Nature_paper.pdf
and http://www.nhgri.nih.gov/DIR/Microarray/Melanoma_Supplement/index.html


title: Spleen vs Platelet activating factor Treated B cell 120min (set1)

status: Public on Apr 05 2003

city: Pasadena

first: Sangdun

last: Choi

state: CA

address: 1200 E. California Blvd

department: Biology

institute: California Institute of Technology

description:
total RNA from mouse (male c57BL/6) spleen
total RNA from mouse (male c57BL/6) B cells treated with Platelet activating factor for 120min

source_name: Spleen was labeled with Cyanine-3 (green).

source_name: Platelet activating factor Treated B cells were labeled with Cyanine-5 (red)


title: RH_Th9_25B

status: Public on Jan 29 2003

city: Munich

first: Reinhard

last: Hoffmann

address: Trogerstr. 30

institute: Institute for medical microbiology

description:
Flow cytometrically purified T cell precursors of C57BL/6 mice. RNA was labeled by double round in vitro transcription-based RNA amplification. Images were analyzed with Affymetrix MAS 4.0. Files contain unnormalized AvgDiff values.
Surface marker phenotype: CD44-CD25+CD4-CD8-
Replicate number: 9   (Note: all samples with identical replicate numbers are derived from the same vial of cells).
Background Avg: 2795.25, Stdev: 175.00, Max: 3188.2, Min: 2583.8
Corner+ Avg:3285, Count:32
Corner- Avg:43240, Count:32
BF= SDT=257.4(4.00Q) SRT=1.50 ABS={{3.0,4.0},{0.33,0.43},{0.90,1.30}} RawQ=64.34 QMult=2.80 RL=10.0 HZ=4 VZ=4 BG=2 CT=257.4 PCT=80 DD={{3.0,4.0},{0.33,0.43},{0.20,0.30},{0.90,1.30}} AvgNCT=200 FCMin=1.00 FCMax=1.00 STP=3.0 NF=1.000000 SF=1.000000

source_name: Thymic T cell precursors