title: array-CGH - O4

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51535.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.08; Parameter Scan Time = 17:30:24; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 83302; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.08; Parameter Scan Time = 17:30:24; Parameter PMT Volts = 690; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 152780; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.58; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - O1

status: Public on May 27 2005

type: genomic

city: Stanford

first: Markus

last: Bredel

state: CA

country: USA

institute: Stanford University School of Medicine

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51543.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.64; Parameter Scan Time = 16:59:22; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84549; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.14; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.64; Parameter Scan Time = 16:59:22; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154027; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.55; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel

molecule: genomic DNA

organism: Homo sapiens

source_name: male reference


title: WLIL13S6pos6

type: RNA

city: San Francisco

first: Michael

middle: E.

last: Salazar

address: 1550 Fourth Street, RM 545

institute: University of California, San Francisco

description:
Total RNA from whole lung
no amplification-cDNA
IL-13+Stat6+/-

molecule: total RNA

organism: Mus musculus

source_name: Ref Pool 3


title: array-CGH - sGBM1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51542.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.16; Parameter Scan Time = 18:13:28; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84623; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.16; Parameter Scan Time = 18:13:28; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154101; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - JPA1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51519.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.41; Parameter Scan Time = 18:36:29; Parameter PMT Volts = 520; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80841; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.10; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.41; Parameter Scan Time = 18:36:29; Parameter PMT Volts = 690; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150298; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel

source_name: female reference


title: WLIL13S6pos5

source_name: Ref Pool 4


title: array-CGH - O3

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51534.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.02; Parameter Scan Time = 17:15:33; Parameter PMT Volts = 540; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 83287; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.02; Parameter Scan Time = 17:15:33; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 152765; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.59; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - JPA2

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-05/51562.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.29; Parameter Scan Time = 17:38:58; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85385; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.29; Parameter Scan Time = 17:38:58; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154863; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.56; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GS2

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51527.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.90; Parameter Scan Time = 16:15:25; Parameter PMT Volts = 550; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 83227; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.90; Parameter Scan Time = 16:15:25; Parameter PMT Volts = 730; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 152705; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - LGG1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51545.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.89; Parameter Scan Time = 17:29:00; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84578; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.89; Parameter Scan Time = 17:29:00; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154056; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - JPA3

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51520.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.66; Parameter Scan Time = 18:52:06; Parameter PMT Volts = 510; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80856; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.10; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.66; Parameter Scan Time = 18:52:06; Parameter PMT Volts = 710; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150314; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.58; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GNN1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51513.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.80; Parameter Scan Time = 17:26:37; Parameter PMT Volts = 530; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80770; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.80; Parameter Scan Time = 17:26:37; Parameter PMT Volts = 740; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150228; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.53; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: WLIL13S6pos4


title: array-CGH - GBM9

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51540.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.46; Parameter Scan Time = 16:42:03; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84532; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.46; Parameter Scan Time = 16:42:03; Parameter PMT Volts = 690; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154010; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.55; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM6

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51536.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.79; Parameter Scan Time = 15:43:21; Parameter PMT Volts = 510; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84472; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.07; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.79; Parameter Scan Time = 15:43:21; Parameter PMT Volts = 700; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 153950; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.53; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GS1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51503.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.22; Parameter Scan Time = 14:24:42; Parameter PMT Volts = 520; Parameter Scan Date = 2004-03-17; Parameter Pixel Size = 10; Parameter Laser on time = 79005; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.08; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.22; Parameter Scan Time = 14:24:42; Parameter PMT Volts = 710; Parameter Scan Date = 2004-03-17; Parameter Pixel Size = 10; Parameter Laser on time = 148506; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.52; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM4

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51549.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.47; Parameter Scan Time = 18:56:56; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84666; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.02; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.47; Parameter Scan Time = 18:56:56; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154144; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.58; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: WLIL13S6neg6

description:
Total RNA from whole lung
no amplification-cDNA
IL-13+Stat6-/-


title: WLIL13S6pos1


title: array-CGH - GBM5

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51548.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.29; Parameter Scan Time = 18:42:20; Parameter PMT Volts = 510; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84652; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.05; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.29; Parameter Scan Time = 18:42:20; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154130; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.58; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: WLIL13S6neg5


title: WLIL13S6neg4


title: WLIL13S6neg2


title: WLIL13S6neg1


title: array-CGH - GBM32

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51515.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.19; Parameter Scan Time = 17:40:18; Parameter PMT Volts = 520; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80785; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.10; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.19; Parameter Scan Time = 17:40:18; Parameter PMT Volts = 690; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150243; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.55; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: WLIL13S6pos3


title: array-CGH - GBM30

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51529.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.08; Parameter Scan Time = 17:44:20; Parameter PMT Volts = 540; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 83315; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.08; Parameter Scan Time = 17:44:20; Parameter PMT Volts = 700; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 152793; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.58; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM3

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51511.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.55; Parameter Scan Time = 17:12:53; Parameter PMT Volts = 530; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80757; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.55; Parameter Scan Time = 17:12:53; Parameter PMT Volts = 690; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150215; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.54; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: WLIL13Epi6

description:
Total RNA from whole lung
no amplification-cDNA
IL13+Stat6-/-Epi+


title: WLIL13Epi1


title: WLIL13Epi2


title: TPOVA032

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
OVA

source_name: Ref 1.5


title: array-CGH - GBM27

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51546.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.01; Parameter Scan Time = 17:43:09; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84593; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.01; Parameter Scan Time = 17:43:09; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154070; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM31

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51528.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.99; Parameter Scan Time = 16:29:08; Parameter PMT Volts = 550; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 83240; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.99; Parameter Scan Time = 16:29:08; Parameter PMT Volts = 730; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 152718; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPIL13Epi020

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
IL-13+Stat6-/-Epi+


title: TPPBS026

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
PBS


title: WLIL13Epi3


title: TPIL13S6neg014

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
IL-13+Stat6-/-


title: array-CGH - GBM29

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51556.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.65; Parameter Scan Time = 17:56:23; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85402; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.06; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.65; Parameter Scan Time = 17:56:23; Parameter PMT Volts = 690; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154880; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.59; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM26

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-05/51566.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.36; Parameter Scan Time = 15:05:19; Parameter PMT Volts = 530; Parameter Scan Date = 2004-04-30; Parameter Pixel Size = 10; Parameter Laser on time = 88173; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.19; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.36; Parameter Scan Time = 15:05:19; Parameter PMT Volts = 700; Parameter Scan Date = 2004-04-30; Parameter Pixel Size = 10; Parameter Laser on time = 157651; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.50; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM24

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51518.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.14; Parameter Scan Time = 18:22:21; Parameter PMT Volts = 520; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80826; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.15; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.14; Parameter Scan Time = 18:22:21; Parameter PMT Volts = 690; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150284; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.58; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM23

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-05/51564.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.84; Parameter Scan Time = 19:22:39; Parameter PMT Volts = 500; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85488; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.84; Parameter Scan Time = 19:22:39; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154966; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.59; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM2

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51554.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.93; Parameter Scan Time = 18:16:43; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85423; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.93; Parameter Scan Time = 18:16:43; Parameter PMT Volts = 740; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154901; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.59; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM28

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51530.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.11; Parameter Scan Time = 17:57:41; Parameter PMT Volts = 540; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 83329; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.11; Parameter Scan Time = 17:57:41; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 152806; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.58; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM19

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51544.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.77; Parameter Scan Time = 17:14:02; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84564; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.77; Parameter Scan Time = 17:14:02; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154041; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.56; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM20

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-05/51565.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.27; Parameter Scan Time = 14:49:16; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-30; Parameter Pixel Size = 10; Parameter Laser on time = 88157; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.15; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.27; Parameter Scan Time = 14:49:16; Parameter PMT Volts = 680; Parameter Scan Date = 2004-04-30; Parameter Pixel Size = 10; Parameter Laser on time = 157635; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.50; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPIL13Epi018

source_name: Ref 1.4


title: TPOVA030


title: array-CGH - GBM15

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51557.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.08; Parameter Scan Time = 18:35:49; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85442; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.11; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.08; Parameter Scan Time = 18:35:49; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154920; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.60; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM25

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51531.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.14; Parameter Scan Time = 18:11:55; Parameter PMT Volts = 530; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 83343; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.14; Parameter Scan Time = 18:11:55; Parameter PMT Volts = 690; Parameter Scan Date = 2004-04-07; Parameter Pixel Size = 10; Parameter Laser on time = 152821; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.58; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM16

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51516.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.50; Parameter Scan Time = 17:54:25; Parameter PMT Volts = 520; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80798; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.50; Parameter Scan Time = 17:54:25; Parameter PMT Volts = 690; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150256; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.56; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM12

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51552.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.88; Parameter Scan Time = 15:45:44; Parameter PMT Volts = 510; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85272; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.22; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.88; Parameter Scan Time = 15:45:44; Parameter PMT Volts = 680; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154749; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.54; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM22

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51558.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.29; Parameter Scan Time = 18:50:30; Parameter PMT Volts = 500; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85457; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.29; Parameter Scan Time = 18:50:30; Parameter PMT Volts = 730; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154935; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.59; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: WLIL13Epi4

description:
Total RNA from whole lung
no amplification-cDNA
IL13+Stat6-/-Epi+


title: array-CGH - GBM21

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-05/51563.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.57; Parameter Scan Time = 19:06:12; Parameter PMT Volts = 510; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85473; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 34.57; Parameter Scan Time = 19:06:12; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154950; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.60; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPPBS024

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
PBS


title: TPOVA028

description:
Total RNA from tracheal perfusate

OVA

source_name: Ref 1.3


title: array-CGH - GBM13

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-05/51559.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.22; Parameter Scan Time = 16:43:24; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85330; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.19; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.22; Parameter Scan Time = 16:43:24; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154807; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.56; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - GBM11

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51550.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.80; Parameter Scan Time = 19:10:39; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84680; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.10; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.80; Parameter Scan Time = 19:10:39; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154158; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.59; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPIL13S6pos004

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
IL-13+Stat6+/-


title: TPIL13S6neg012

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
IL-13+Stat6-/-


title: TPIL13S6pos006


title: TPIL13S6pos008


title: TPIL13Epi016


title: array-CGH - GBM1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51551.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.82; Parameter Scan Time = 15:30:00; Parameter PMT Volts = 510; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85256; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.14; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.82; Parameter Scan Time = 15:30:00; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154734; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.54; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPIL13S6neg010


title: TPPBS022

description:
Total RNA from tracheal perfusate

PBS


title: TPOVA031

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
OVA

source_name: Ref 1.2


title: array-CGH - AOA5

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51508.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.34; Parameter Scan Time = 16:13:53; Parameter PMT Volts = 470; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80698; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.10; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.34; Parameter Scan Time = 16:13:53; Parameter PMT Volts = 640; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150155; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.51; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - AOA6

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51541.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.07; Parameter Scan Time = 17:57:03; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84606; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.07; Parameter Scan Time = 17:57:03; Parameter PMT Volts = 730; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154084; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPPBS023


title: array-CGH - AOA7

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51510.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.71; Parameter Scan Time = 16:47:02; Parameter PMT Volts = 540; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80731; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.71; Parameter Scan Time = 16:47:02; Parameter PMT Volts = 700; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150189; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.52; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - AOA2

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51553.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.03; Parameter Scan Time = 16:11:37; Parameter PMT Volts = 510; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85298; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.17; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.03; Parameter Scan Time = 16:11:37; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154776; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.55; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - AOA4

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51538.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.00; Parameter Scan Time = 16:13:55; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84503; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.14; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.00; Parameter Scan Time = 16:13:55; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 153981; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.54; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - AO3

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51517.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.86; Parameter Scan Time = 18:09:06; Parameter PMT Volts = 520; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80813; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.86; Parameter Scan Time = 18:09:06; Parameter PMT Volts = 690; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150270; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPIL13Epi017

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
IL-13+Stat6-/-Epi+


title: TPIL13Epi019

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
IL13+Stat6-/-Epi+

source_name: Ref 1.1


title: TPIL13S6pos005


title: TPPBS025


title: array-CGH - AO1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51547.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.22; Parameter Scan Time = 18:27:41; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84637; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.14; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.22; Parameter Scan Time = 18:27:41; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 154115; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - AA3

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51509.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.71; Parameter Scan Time = 16:32:47; Parameter PMT Volts = 550; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80717; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.15; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.71; Parameter Scan Time = 16:32:47; Parameter PMT Volts = 710; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150174; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.53; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPIL13S6neg013


title: array-CGH - AO2

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51506.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.79; Parameter Scan Time = 15:52:33; Parameter PMT Volts = 530; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 80676; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.10; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.79; Parameter Scan Time = 15:52:33; Parameter PMT Volts = 710; Parameter Scan Date = 2004-03-26; Parameter Pixel Size = 10; Parameter Laser on time = 150134; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.48; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: TPIL13S6neg011

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
IL13+Stat6-/-


title: TPIL13S6pos007

description:
Total RNA from tracheal perfusate
1 round amplification (Ambion's MessageAmp aRNA Kit)
IL13+Stat6+/-


title: TPOVA029


title: array-CGH - AA1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-05/51560.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.31; Parameter Scan Time = 16:58:07; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85344; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.15; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.31; Parameter Scan Time = 16:58:07; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154822; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: GC (HKG39N)

status: Public on May 25 2005

first: Xin

last: Chen

institute: UCSF

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16025.gif; format: GIF

source_name: channel 1: Cy3 - CRG, common reference

source_name: channel 2: Cy5 - gastric tissue


title: array-CGH - AA2

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51537.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.91; Parameter Scan Time = 15:59:52; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 84490; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.91; Parameter Scan Time = 15:59:52; Parameter PMT Volts = 710; Parameter Scan Date = 2004-04-13; Parameter Pixel Size = 10; Parameter Laser on time = 153968; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.54; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: array-CGH - AOA1

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-05/51561.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.67; Parameter Scan Time = 17:15:40; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 85362; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.14; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.67; Parameter Scan Time = 17:15:40; Parameter PMT Volts = 720; Parameter Scan Date = 2004-04-16; Parameter Pixel Size = 10; Parameter Laser on time = 154840; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.57; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: GC (HKG31N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16022.gif; format: GIF


title: array-CGH - AOA3

description:
Simple annotation: tumor, Brain
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2004-04/51504.gif; format: GIF
Label_ch1 = Cy3
Label_ch2 = Cy5
Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.32; Parameter Scan Time = 14:44:20; Parameter PMT Volts = 530; Parameter Scan Date = 2004-03-17; Parameter Pixel Size = 10; Parameter Laser on time = 79026; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 4.08; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel
Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 33.32; Parameter Scan Time = 14:44:20; Parameter PMT Volts = 700; Parameter Scan Date = 2004-03-17; Parameter Pixel Size = 10; Parameter Laser on time = 148527; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.56; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Markus,,Bredel


title: GC (HKG13T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16016.gif; format: GIF


title: GC (HKG61T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16996.gif; format: GIF


title: GC (HKG76T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18380.gif; format: GIF


title: GC (HKG58T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16924.gif; format: GIF


title: GC (HKG74T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18381.gif; format: GIF


title: GC (HKG3N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18372.gif; format: GIF


title: GC (HKG53T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16950.gif; format: GIF


title: GC (HKG53L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16952.gif; format: GIF


title: GC (HKG26N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18513.gif; format: GIF


title: GC (HKG34L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16994.gif; format: GIF


title: GC (HKG30T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16560.gif; format: GIF


title: GC (HKG77T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18379.gif; format: GIF


title: GC (HKG63T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18377.gif; format: GIF


title: GC (HKG36N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16019.gif; format: GIF


title: GC (HKG73T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18509.gif; format: GIF


title: GC (HKG56N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18376.gif; format: GIF


title: GC (HKG78T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18378.gif; format: GIF


title: GC (HKG14T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16372.gif; format: GIF


title: GC (HKG29T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16946.gif; format: GIF


title: GC (HKG66T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18510.gif; format: GIF


title: GC (HKG55N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18375.gif; format: GIF


title: GC (HKG29L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16948.gif; format: GIF


title: GC (HKG56L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16258.gif; format: GIF


title: GC (HKG56T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16257.gif; format: GIF


title: GC (HKG41N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16259.gif; format: GIF


title: GC (HKG41T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16256.gif; format: GIF


title: GC (HKG40T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/17160.gif; format: GIF


title: GC (HKG68T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18508.gif; format: GIF


title: GC (HKG34N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16255.gif; format: GIF


title: GC (HKG26T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15118.gif; format: GIF


title: GC (HKG57L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16868.gif; format: GIF


title: GC (HKG49L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16715.gif; format: GIF


title: GC (HKG9T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15117.gif; format: GIF


title: GC (HKG8T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15116.gif; format: GIF


title: GC (HKG16T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16602.gif; format: GIF


title: GC (HKG72T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18169.gif; format: GIF


title: GC (HKG60T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16527.gif; format: GIF


title: GC (HKG19T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15769.gif; format: GIF


title: GC (HKG36T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15774.gif; format: GIF


title: GC (HKG71T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18168.gif; format: GIF


title: GC (HKG57T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16867.gif; format: GIF


title: GC (HKG60L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/17078.gif; format: GIF


title: GC (HKG38L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16707.gif; format: GIF


title: GC (HKG32T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15767.gif; format: GIF


title: GC (HKG10L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16709.gif; format: GIF


title: GC (HKG48T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15779.gif; format: GIF


title: GC (HKG34T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16603.gif; format: GIF


title: GC (HKG80T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/17076.gif; format: GIF


title: GC (HKG84T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-06/17328.gif; format: GIF


title: GC (HKG75T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/17075.gif; format: GIF


title: GLI2 72h D (in) 2

city: Salzburg

first: Veronika

last: Sander

address: Hellbrunnerstrasse 34

department: Molecular Biology

country: Austria

institute: University of Salzburg

description:
total mRNA prepared from HaCaT keratinocytes (G2H) expressing GLI2 in an tet-dependant manner; hybridisation on Incyte clone set
Keywords = GLI2 target genes

source_name: G2H (HaCaT +GLI2)


title: GC (HKG70T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-06/17327.gif; format: GIF


title: GLI2 72h C (ui) 2


title: GLI2 24h C (ui) 2


title: GC (HKG82T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/17077.gif; format: GIF


title: GC (HKG18T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16525.gif; format: GIF


title: GLI2 72h A (ui) 2


title: GC (HKG49T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16713.gif; format: GIF


title: GLI2 72h B (in) 2


title: GC (HKG17T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16520.gif; format: GIF


title: GLI2 24h B (in) 2


title: GLI1 72h D (in) 2

description:
total mRNA prepared from TE19 HaCaT keratinocytes expressing GLI1 in an tet-dependant manner; hybridisation on Incyte clone set
Keywords = GLI1 target genes

source_name: TE19 +GLI1


title: GC (HKG44T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16596.gif; format: GIF


title: GLI1 72h C (ui) 2


title: GLI2 24h A (ui) 2


title: GLI2 24h D (in) 2


title: GLI1 72h B (in) 2


title: GC (HKG3T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/17074.gif; format: GIF


title: GLI1 72h A (ui) 2


title: GC (HKG55T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16599.gif; format: GIF


title: GLI1 24h D (in) 2


title: GC (HKG69T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16991.gif; format: GIF


title: GLI1 24h C (ui) 2


title: GC (HKG64T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16554.gif; format: GIF


title: GC (HKG79T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16992.gif; format: GIF


title: GLI1 24h B (in) 2


title: GC (HKG46T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16519.gif; format: GIF


title: GC (HKG27T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15284.gif; format: GIF


title: GC (HKG35T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16594.gif; format: GIF


title: GC (HKG37T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16013.gif; format: GIF


title: GC (HKG45T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16598.gif; format: GIF


title: GC (HKG39T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18222.gif; format: GIF


title: GC (HKG12T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16368.gif; format: GIF


title: GC (HKG28T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18221.gif; format: GIF


title: GC (HKG59N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18220.gif; format: GIF


title: GC (HKG38T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16559.gif; format: GIF


title: GLI1 24h A (ui) 2

description:
total mRNA prepared from TE19 HaCaT keratinocytes expressing GLI1 in an tet-dependant manner; hybridisation on Incyte clone set
Keywords = GLI1 target genes


title: GLI2 72h D (in) 1

description:
total mRNA prepared from HaCaT keratinocytes (G2H) expressing GLI2 in an tet-dependant manner; hybridisation on Incyte clone set
Keywords = GLI2 target genes


title: GC (HKG11T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16366.gif; format: GIF


title: GC (HKG33T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16989.gif; format: GIF


title: GC (HKG42L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16363.gif; format: GIF


title: GLI2 72h C (ui) 1


title: GC (HKG69N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18219.gif; format: GIF


title: GLI2 72h B (in) 1


title: GLI2 72h A (ui) 1


title: GLI2 24h D (in) 1


title: GC (HKG31T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18217.gif; format: GIF


title: GC (HKG54T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16369.gif; format: GIF


title: GC (HKG59T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16251.gif; format: GIF


title: GLI2 24h C (ui) 1


title: GC (HKG2T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-03/14601.gif; format: GIF


title: GC (HKG65N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18215.gif; format: GIF


title: GC (HKG24T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-03/14600.gif; format: GIF


title: GC (HKG25T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15270.gif; format: GIF


title: GC (HKG22T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15009.gif; format: GIF


title: GC (HKG64N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16866.gif; format: GIF


title: GLI2 24h B (in) 1


title: GC (HKG10T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15233.gif; format: GIF


title: GC (HKG95N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-10/21273.gif; format: GIF


title: GC (HKG43T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16250.gif; format: GIF


title: GC (HKG4N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16864.gif; format: GIF


title: GC (HKG81T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18172.gif; format: GIF


title: GC (HKG15T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15772.gif; format: GIF


title: GLI2 24h A (ui) 1

description:
total mRNA prepared from HaCaT keratinocytes (G2H) expressing GLI2 in an tet-dependant manner; hybridisation on Incyte clone set
Keywords = GLI2 target genes


title: GC (HKG90N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-10/21272.gif; format: GIF


title: 02.NuGen_2_CEL

description: Pool of multiple human tissue total RNAs

source_name: Clontech Universal Human Reference


title: GLI1 72h D (in) 1

description:
total mRNA prepared from TE19 HaCaT keratinocytes expressing GLI1 in an tet-dependant manner; hybridisation on Incyte clone set
Keywords = GLI1 target genes


title: 01.NuGen_1_CEL


title: 6.100.NG_CEL

description: Total murine liver RNA

source_name: Liver


title: GC (HKG52T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15299.gif; format: GIF


title: GC (HKG5T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15008.gif; format: GIF


title: GC (HKG83T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18174.gif; format: GIF


title: GC (HKG5L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/17079.gif; format: GIF


title: GC (HKG23T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15295.gif; format: GIF


title: GC (HKG94T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-08/19486.gif; format: GIF


title: GC (HKG65T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-07/18170.gif; format: GIF


title: 5.100.NG_CEL

description: Total murine liver RNA


title: GC (HKG87T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-09/20205.gif; format: GIF


title: GC (HKG89N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-10/21271.gif; format: GIF


title: GLI1 72h B (in) 1


title: GC (HKG20T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16711.gif; format: GIF


title: GC (HKG51T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/15077.gif; format: GIF


title: GC (HKG42T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs//17159.gif; format: GIF


title: 4.100.NG_CEL

description: Total murine liver RNA


title: GLI1 72h A (ui) 1


title: 3.5A.NG_CEL

description: Total murine liver RNA


title: GLI1 72h C (ui) 1


title: GC (HKG55L)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16601.gif; format: GIF


title: GLI1 24h C (ui) 1


title: 2.5A.NG_CEL

description: Total murine liver RNA


title: GC (HKG7T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-03/14598.gif; format: GIF


title: GC (HKG96N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-10/21465.gif; format: GIF


title: GLI1 24h D (in) 1


title: GC (HKG21T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-03/14599.gif; format: GIF


title: GC (HKG10N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-04/16253.gif; format: GIF


title: GLI1 24h A (ui) 1

description:
total mRNA prepared from TE19 HaCaT keratinocytes expressing GLI1 in an tet-dependant manner; hybridisation on Incyte clone set
Keywords = GLI1 target genes


title: 1.5A.NG_CEL

description: Total murine liver RNA


title: GC (HKG90T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-08/19470.gif; format: GIF


title: GC (HKG47T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-08/19211.gif; format: GIF


title: GC (HKG44N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-05/16370.gif; format: GIF


title: GLI1 24h B (in) 1


title: GC (HKG71N)

description:
Simple annotation: Non-tumor tissue, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-08/19535.gif; format: GIF


title: GC (HKG67T)

description:
Simple annotation: Primary tumor, Stomach cancer
Image: http://genome-www5.stanford.edu/MicroArray/gifs/2001-08/19066.gif; format: GIF


title: Filling panicle AP3

status: Public on May 24 2005

city: NEW HAVEN

first: Ligeng

last: Ma

state: CT

address: 165 Prospect

department: Molecular, Cellular & Developmental Biology

institute: Yale University

description:
Panicle vs cultured cell
Sample_extract_protocol_ch[1]: Trizol/RNeasy
Sample_extract_protocol_ch[2]: Trizol/RNeasy
Sample_hyb_protocol: 42C 50% formamide
Sample_label_ch[1]: cy5
Sample_label_ch[2]: cy3
Sample_label_protocol_ch[1]: amino-allyl and monofunctional dye
Sample_label_protocol_ch[2]: amino-allyl and monofunctional dye
Sample_molecule_ch[1]: total RNA
Sample_molecule_ch[2]: total RNA
Sample_organism_ch[1]: Oryza sativa (indica cultivar-group)
Sample_organism_ch[2]: Oryza sativa (indica cultivar-group)
Sample_scan_protocol: Axon GenePix 4000B
Sample_specimen_provider_ch[1]: Deng
Sample_specimen_provider_ch[2]: Deng
Sample_transformation: raw data

organism: Oryza sativa Indica Group

source_name: Panicle(or root or panicle etc)

source_name: cultured cell (for all samples)


title: Filling panicle AP1

description:
Panicle vs cultured cell
Sample_extract_protocol_ch[1]: Trizol/RNeasy
Sample_extract_protocol_ch[2]: Trizol/RNeasy
Sample_hyb_protocol: 42C 50% formamide
Sample_label_ch[1]: cy5
Sample_label_ch[2]: cy3
Sample_label_protocol_ch[1]: amino-allyl and monofunctional dye
Sample_label_protocol_ch[2]: amino-allyl and monofunctional dye
Sample_molecule_ch[1]: total RNA
Sample_molecule_ch[2]: total RNA
Sample_organism_ch[1]: Oryza sativa (indica cultivar-group)
Sample_organism_ch[2]: Oryza sativa (indica cultivar-group)
Sample_organism_ch[2]: Oryza sativa (indica cultivar-group)
Sample_scan_protocol: Axon GenePix 4000B
Sample_specimen_provider_ch[1]: Deng
Sample_specimen_provider_ch[2]: Deng
Sample_transformation: raw data