title: Human breast tumor311

status: Public on Jun 28 2006

type: RNA

city: Seattle

first: Chang-Kyu

last: Lee

state: WA

address: 401 Terry Ave N.

department: Informatics

country: USA

institute: Rosetta Inpharmatics

description: human breast tumor RNA

data_processing: log ratio of mean pixel intensities of two channels

molecule: total RNA

organism: Homo sapiens

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: "Sample 76, <5 yr survival(26 months) age 52"


title: Human breast tumor302

description: human breast tumor RNA

source_name: "Sample 58, <5 yr survival(13 months) age 38"


title: Human breast tumor294

description: human breast tumor RNA

source_name: "Sample 36,>5 yr survival(121 months) age 52"


title: Human breast tumor307

description: human breast tumor RNA

source_name: "Sample 71, <5 yr survival(24 months) age 48"


title: Human breast tumor308

description: human breast tumor RNA

source_name: "Sample 72, <5 yr survival(36 months) age 39"


title: Human breast tumor303

description: human breast tumor RNA

source_name: "Sample 59, <5 yr survival(56 months) age 44"


title: Human breast tumor297

description: human breast tumor RNA

source_name: "Sample 45, <5 yr survival(13 months) age 37"


title: Human breast tumor292

description: human breast tumor RNA

source_name: "Sample 28,>5 yr survival(75 months) age 40"


title: Human breast tumor291

description: human breast tumor RNA

source_name: "Sample 27,>5 yr survival(62 months) age 45"


title: Human breast tumor310

description: human breast tumor RNA

source_name: "Sample 75, <5 yr survival(27 months) age 52"


title: Human breast tumor304

description: human breast tumor RNA

source_name: "Sample 60, <5 yr survival(59 months) age 45"


title: Human breast tumor299

description: human breast tumor RNA

source_name: "Sample 51, <5 yr survival(59 months) age 41"


title: Human breast tumor296

description: human breast tumor RNA

source_name: "Sample 39,>5 yr survival(132 months) age 46"


title: Human breast tumor309

description: human breast tumor RNA

source_name: "Sample 73, <5 yr survival(26 months) age 50"


title: Human breast tumor295

description: human breast tumor RNA

source_name: "Sample 38,>5 yr survival(88 months) age 52"


title: Human breast tumor306

description: human breast tumor RNA

source_name: "Sample 62, <5 yr survival(10 months) age 36"


title: Human breast tumor289

description: human breast tumor RNA

source_name: pool of individual breast tumors

source_name: "Sample 17,>5 yr survival(94 months) age 48"


title: Human breast tumor301

description: human breast tumor RNA

source_name: "Sample 57, <5 yr survival(28 months) age 28"


title: Human breast tumor293

description: human breast tumor RNA

source_name: "Sample 29,>5 yr survival(137 months) age 52"


title: Human breast tumor287

description: human breast tumor RNA

source_name: "Sample 13,>5 yr survival(98 months) age 41"


title: Human breast tumor286

description: human breast tumor RNA

source_name: "Sample 12,>5 yr survival(94 months) age 46"


title: Human breast tumor305

description: human breast tumor RNA

source_name: "Sample 61, <5 yr survival(32 months) age 38"


title: Human breast tumor288

description: human breast tumor RNA

source_name: "Sample 14,>5 yr survival(99 months) age 48"


title: Human breast tumor298

description: human breast tumor RNA

source_name: "Sample 48, <5 yr survival(12 months) age 30"


title: Human breast tumor300

description: human breast tumor RNA

source_name: "Sample 56, <5 yr survival(56 months) age 30"


title: Human breast tumor285

description: human breast tumor RNA

source_name: "Sample 11,>5 yr survival(70 months) age 37"


title: Human breast tumor283

description: human breast tumor RNA

source_name: "Sample 8,>5 yr survival(106 months) age 48"


title: Human breast tumor290

description: human breast tumor RNA

source_name: "Sample 26,>5 yr survival(84 months) age 40"


title: Human breast tumor279

description: human breast tumor RNA


title: Human breast tumor280

description: human breast tumor RNA

source_name: "Sample 4,>5 yr survival(156 months) age 41"


title: Human breast tumor281

description: human breast tumor RNA

source_name: "Sample 6,>5 yr survival(134 months) age 49"


title: Human breast tumor275

description: human breast tumor RNA


title: Human breast tumor284

description: human breast tumor RNA

source_name: "Sample 9,>5 yr survival(124 months) age 48"


title: Human breast tumor282

description: human breast tumor RNA

source_name: "Sample 7,>5 yr survival(122 months) age 46"


title: Human breast tumor278

description: human breast tumor RNA

source_name: pool of individual breast tumors


title: Human breast tumor273

description: human breast tumor RNA


title: Human breast tumor272

description: human breast tumor RNA


title: Human breast tumor274

description: human breast tumor RNA


title: Human breast tumor271

description: human breast tumor RNA


title: Human breast tumor277

description: human breast tumor RNA


title: Human breast tumor268

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 402

tag: Hu Breast Cancer S# 402


title: Human breast tumor270

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 404

tag: Hu Breast Cancer S# 404


title: Human breast tumor276

description: human breast tumor RNA


title: Human breast tumor269

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 403

tag: Hu Breast Cancer S# 403


title: Human breast tumor265

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 397

tag: Hu Breast Cancer S# 397


title: Human breast tumor260

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 392

tag: Hu Breast Cancer S# 392


title: Human breast tumor263

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 395

tag: Hu Breast Cancer S# 395


title: Human breast tumor266

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 398

tag: Hu Breast Cancer S# 398


title: Human breast tumor264

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 396

tag: Hu Breast Cancer S# 396


title: Human breast tumor258

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 390

tag: Hu Breast Cancer S# 390


title: Human breast tumor253

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 383

tag: Hu Breast Cancer S# 383


title: Human breast tumor259

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 391

tag: Hu Breast Cancer S# 391


title: Human breast tumor267

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 401

tag: Hu Breast Cancer S# 401


title: Human breast tumor252

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 381

tag: Hu Breast Cancer S# 381


title: Human breast tumor261

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 393

tag: Hu Breast Cancer S# 393


title: Human breast tumor257

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 389

tag: Hu Breast Cancer S# 389


title: Human breast tumor249

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 378

tag: Hu Breast Cancer S# 378


title: Human breast tumor247

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 375

tag: Hu Breast Cancer S# 375


title: Human breast tumor244

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 371

tag: Hu Breast Cancer S# 371


title: Human breast tumor262

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 394

tag: Hu Breast Cancer S# 394


title: Human breast tumor254

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 385

tag: Hu Breast Cancer S# 385


title: Human breast tumor255

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 387

tag: Hu Breast Cancer S# 387


title: Human breast tumor256

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 388

tag: Hu Breast Cancer S# 388


title: Human breast tumor243

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 370

tag: Hu Breast Cancer S# 370


title: Human breast tumor251

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 380

tag: Hu Breast Cancer S# 380


title: Human breast tumor248

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 377

tag: Hu Breast Cancer S# 377


title: Human breast tumor238

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 365

tag: Hu Breast Cancer S# 365


title: Human breast tumor242

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 369

tag: Hu Breast Cancer S# 369


title: Human breast tumor245

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 373

tag: Hu Breast Cancer S# 373


title: Human breast tumor246

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 374

tag: Hu Breast Cancer S# 374


title: Human breast tumor237

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 364

tag: Hu Breast Cancer S# 364


title: Human breast tumor240

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 367

tag: Hu Breast Cancer S# 367


title: Human breast tumor250

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 379

tag: Hu Breast Cancer S# 379


title: Human breast tumor233

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 360

tag: Hu Breast Cancer S# 360


title: Human breast tumor230

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 357

tag: Hu Breast Cancer S# 357


title: Human breast tumor228

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 355

tag: Hu Breast Cancer S# 355


title: Human breast tumor239

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 366

tag: Hu Breast Cancer S# 366


title: Human breast tumor223

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 350

tag: Hu Breast Cancer S# 350


title: Human breast tumor218

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 345

tag: Hu Breast Cancer S# 345


title: Human breast tumor241

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 368

tag: Hu Breast Cancer S# 368


title: Human breast tumor236

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 363

tag: Hu Breast Cancer S# 363


title: Human breast tumor234

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 361

tag: Hu Breast Cancer S# 361


title: Human breast tumor217

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 344

tag: Hu Breast Cancer S# 344


title: Human breast tumor229

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 356

tag: Hu Breast Cancer S# 356


title: Human breast tumor231

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 358

tag: Hu Breast Cancer S# 358


title: Human breast tumor235

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 362

tag: Hu Breast Cancer S# 362


title: Human breast tumor211

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 338

tag: Hu Breast Cancer S# 338


title: Human breast tumor225

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 352

tag: Hu Breast Cancer S# 352


title: Human breast tumor232

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 359

tag: Hu Breast Cancer S# 359


title: Human breast tumor208

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 335

tag: Hu Breast Cancer S# 335


title: Human breast tumor213

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 340

tag: Hu Breast Cancer S# 340


title: Human breast tumor207

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 334

tag: Hu Breast Cancer S# 334


title: Human breast tumor227

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 354

tag: Hu Breast Cancer S# 354


title: Human breast tumor206

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 333

tag: Hu Breast Cancer S# 333


title: Human breast tumor205

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 332

tag: Hu Breast Cancer S# 332


title: Human breast tumor202

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 329

tag: Hu Breast Cancer S# 329


title: Human breast tumor201

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 328

tag: Hu Breast Cancer S# 328


title: Human breast tumor196

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 323

tag: Hu Breast Cancer S# 323


title: Human breast tumor220

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 347

tag: Hu Breast Cancer S# 347


title: Human breast tumor222

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 349

tag: Hu Breast Cancer S# 349


title: Human breast tumor226

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 353

tag: Hu Breast Cancer S# 353


title: Human breast tumor216

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 343

tag: Hu Breast Cancer S# 343


title: Human breast tumor199

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 326

tag: Hu Breast Cancer S# 326


title: Human breast tumor214

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 341

tag: Hu Breast Cancer S# 341


title: Human breast tumor192

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 319

tag: Hu Breast Cancer S# 319


title: Human breast tumor197

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 324

tag: Hu Breast Cancer S# 324


title: Human breast tumor224

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 351

tag: Hu Breast Cancer S# 351


title: Human breast tumor221

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 348

tag: Hu Breast Cancer S# 348


title: Human breast tumor189

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 315

tag: Hu Breast Cancer S# 315


title: Human breast tumor191

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 318

tag: Hu Breast Cancer S# 318


title: Human breast tumor219

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 346

tag: Hu Breast Cancer S# 346


title: Human breast tumor188

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 314

tag: Hu Breast Cancer S# 314


title: Human breast tumor215

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 342

tag: Hu Breast Cancer S# 342


title: Human breast tumor210

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 337

tag: Hu Breast Cancer S# 337


title: Human breast tumor184

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 310

tag: Hu Breast Cancer S# 310


title: Human breast tumor209

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 336

tag: Hu Breast Cancer S# 336


title: Human breast tumor185

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 311

tag: Hu Breast Cancer S# 311


title: Human breast tumor179

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 305

tag: Hu Breast Cancer S# 305


title: Human breast tumor183

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 309

tag: Hu Breast Cancer S# 309


title: Human breast tumor204

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 331

tag: Hu Breast Cancer S# 331


title: Human breast tumor203

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 330

tag: Hu Breast Cancer S# 330


title: Human breast tumor182

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 308

tag: Hu Breast Cancer S# 308


title: Human breast tumor176

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 302

tag: Hu Breast Cancer S# 302


title: Human breast tumor200

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 327

tag: Hu Breast Cancer S# 327


title: Human breast tumor173

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 298

tag: Hu Breast Cancer S# 298


title: Human breast tumor190

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 317

tag: Hu Breast Cancer S# 317


title: Human breast tumor194

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 321

tag: Hu Breast Cancer S# 321


title: Human breast tumor178

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 304

tag: Hu Breast Cancer S# 304


title: Human breast tumor171

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 296

tag: Hu Breast Cancer S# 296


title: Human breast tumor164

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 288

tag: Hu Breast Cancer S# 288


title: Human breast tumor169

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 294

tag: Hu Breast Cancer S# 294


title: Human breast tumor195

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 322

tag: Hu Breast Cancer S# 322


title: Human breast tumor198

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 325

tag: Hu Breast Cancer S# 325


title: Human breast tumor187

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 313

tag: Hu Breast Cancer S# 313


title: Human breast tumor177

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 303

tag: Hu Breast Cancer S# 303


title: Human breast tumor186

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 312

tag: Hu Breast Cancer S# 312


title: Human breast tumor174

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 300

tag: Hu Breast Cancer S# 300


title: Human breast tumor212

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 339

tag: Hu Breast Cancer S# 339


title: Human breast tumor193

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 320

tag: Hu Breast Cancer S# 320


title: Human breast tumor181

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 307

tag: Hu Breast Cancer S# 307


title: Human breast tumor159

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 283

tag: Hu Breast Cancer S# 283


title: Human breast tumor161

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 285

tag: Hu Breast Cancer S# 285


title: Human breast tumor158

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 282

tag: Hu Breast Cancer S# 282


title: Human breast tumor156

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 280

tag: Hu Breast Cancer S# 280


title: Human breast tumor167

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 292

tag: Hu Breast Cancer S# 292


title: Human breast tumor165

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 290

tag: Hu Breast Cancer S# 290


title: Human breast tumor180

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 306

tag: Hu Breast Cancer S# 306


title: Human breast tumor175

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 301

tag: Hu Breast Cancer S# 301


title: Human breast tumor172

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 297

tag: Hu Breast Cancer S# 297


title: Human breast tumor154

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 277

tag: Hu Breast Cancer S# 277


title: Human breast tumor151

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 274

tag: Hu Breast Cancer S# 274


title: Human breast tumor170

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 295

tag: Hu Breast Cancer S# 295


title: Human breast tumor168

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 293

tag: Hu Breast Cancer S# 293


title: Human breast tumor155

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 278

tag: Hu Breast Cancer S# 278


title: Human breast tumor166

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 291

tag: Hu Breast Cancer S# 291


title: Human breast tumor163

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 287

tag: Hu Breast Cancer S# 287


title: Human breast tumor145

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 268

tag: Hu Breast Cancer S# 268


title: Human breast tumor142

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 265

tag: Hu Breast Cancer S# 265


title: Human breast tumor141

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 264

tag: Hu Breast Cancer S# 264


title: Human breast tumor146

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 269

tag: Hu Breast Cancer S# 269


title: Human breast tumor135

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 257

tag: Hu Breast Cancer S# 257


title: Human breast tumor160

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 284

tag: Hu Breast Cancer S# 284


title: Human breast tumor149

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 272

tag: Hu Breast Cancer S# 272


title: Human breast tumor131

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 251

tag: Hu Breast Cancer S# 251


title: Human breast tumor157

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 281

tag: Hu Breast Cancer S# 281


title: Human breast tumor148

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 271

tag: Hu Breast Cancer S# 271


title: Human breast tumor162

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 286

tag: Hu Breast Cancer S# 286


title: Human breast tumor139

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 261

tag: Hu Breast Cancer S# 261


title: Human breast tumor147

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 270

tag: Hu Breast Cancer S# 270


title: Human breast tumor143

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 266

tag: Hu Breast Cancer S# 266


title: Human breast tumor152

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 275

tag: Hu Breast Cancer S# 275


title: Human breast tumor133

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 254

tag: Hu Breast Cancer S# 254


title: Human breast tumor127

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 247

tag: Hu Breast Cancer S# 247


title: Human breast tumor153

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 276

tag: Hu Breast Cancer S# 276


title: Human breast tumor140

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 263

tag: Hu Breast Cancer S# 263


title: Human breast tumor125

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 245

tag: Hu Breast Cancer S# 245


title: Human breast tumor126

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 246

tag: Hu Breast Cancer S# 246


title: Human breast tumor129

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 249

tag: Hu Breast Cancer S# 249


title: Human breast tumor138

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 260

tag: Hu Breast Cancer S# 260


title: Human breast tumor136

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 258

tag: Hu Breast Cancer S# 258


title: Human breast tumor137

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 259

tag: Hu Breast Cancer S# 259


title: Human breast tumor144

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 267

tag: Hu Breast Cancer S# 267


title: Human breast tumor130

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 250

tag: Hu Breast Cancer S# 250


title: Human breast tumor132

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 252

tag: Hu Breast Cancer S# 252


title: Human breast tumor150

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 273

tag: Hu Breast Cancer S# 273


title: Human breast tumor128

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 248

tag: Hu Breast Cancer S# 248


title: Human breast tumor134

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 256

tag: Hu Breast Cancer S# 256


title: Human breast tumor112

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 228

tag: Hu Breast Cancer S# 228


title: Human breast tumor113

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 229

tag: Hu Breast Cancer S# 229


title: Human breast tumor124

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 243

tag: Hu Breast Cancer S# 243


title: Human breast tumor119

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 237

tag: Hu Breast Cancer S# 237


title: Human breast tumor115

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 231

tag: Hu Breast Cancer S# 231


title: Human breast tumor122

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 240

tag: Hu Breast Cancer S# 240


title: Human breast tumor105

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 219

tag: Hu Breast Cancer S# 219


title: Human breast tumor106

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 220

tag: Hu Breast Cancer S# 220


title: Human breast tumor109

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 224

tag: Hu Breast Cancer S# 224


title: Human breast tumor118

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 236

tag: Hu Breast Cancer S# 236


title: Human breast tumor123

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 241

tag: Hu Breast Cancer S# 241


title: Human breast tumor108

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 222

tag: Hu Breast Cancer S# 222


title: Human breast tumor99

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 212

tag: Hu Breast Cancer S# 212


title: Human breast tumor98

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 210

tag: Hu Breast Cancer S# 210


title: Human breast tumor116

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 233

tag: Hu Breast Cancer S# 233


title: Human breast tumor117

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 235

tag: Hu Breast Cancer S# 235


title: Human breast tumor101

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 214

tag: Hu Breast Cancer S# 214


title: Human breast tumor120

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 238

tag: Hu Breast Cancer S# 238


title: Human breast tumor121

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 239

tag: Hu Breast Cancer S# 239


title: Human breast tumor111

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 227

tag: Hu Breast Cancer S# 227


title: Human breast tumor103

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 217

tag: Hu Breast Cancer S# 217


title: Human breast tumor110

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 226

tag: Hu Breast Cancer S# 226


title: Human breast tumor102

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 215

tag: Hu Breast Cancer S# 215


title: Human breast tumor95

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 207

tag: Hu Breast Cancer S# 207


title: Human breast tumor96

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 208

tag: Hu Breast Cancer S# 208


title: Human breast tumor104

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 218

tag: Hu Breast Cancer S# 218


title: Human breast tumor97

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 209

tag: Hu Breast Cancer S# 209


title: Human breast tumor92

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 202

tag: Hu Breast Cancer S# 202


title: Human breast tumor94

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 205

tag: Hu Breast Cancer S# 205


title: Human breast tumor93

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 203

tag: Hu Breast Cancer S# 203


title: Human breast tumor91

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 201

tag: Hu Breast Cancer S# 201


title: Human breast tumor83

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 193

tag: Hu Breast Cancer S# 193


title: Human breast tumor84

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 194

tag: Hu Breast Cancer S# 194


title: Human breast tumor90

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 200

tag: Hu Breast Cancer S# 200


title: Human breast tumor114

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 230

tag: Hu Breast Cancer S# 230


title: Human breast tumor81

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 191

tag: Hu Breast Cancer S# 191


title: Human breast tumor86

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 196

tag: Hu Breast Cancer S# 196


title: Human breast tumor85

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 195

tag: Hu Breast Cancer S# 195


title: Human breast tumor87

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 197

tag: Hu Breast Cancer S# 197


title: Human breast tumor100

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 213

tag: Hu Breast Cancer S# 213


title: Human breast tumor88

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 198

tag: Hu Breast Cancer S# 198


title: Human breast tumor107

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 221

tag: Hu Breast Cancer S# 221


title: Human breast tumor79

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 189

tag: Hu Breast Cancer S# 189


title: Human breast tumor78

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 188

tag: Hu Breast Cancer S# 188


title: Human breast tumor89

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 199

tag: Hu Breast Cancer S# 199


title: Human breast tumor82

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 192

tag: Hu Breast Cancer S# 192


title: Human breast tumor72

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 182

tag: Hu Breast Cancer S# 182


title: Human breast tumor76

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 186

tag: Hu Breast Cancer S# 186


title: Human breast tumor80

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 190

tag: Hu Breast Cancer S# 190


title: Human breast tumor75

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 185

tag: Hu Breast Cancer S# 185


title: Human breast tumor71

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 181

tag: Hu Breast Cancer S# 181


title: Human breast tumor66

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 176

tag: Hu Breast Cancer S# 176


title: Human breast tumor65

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 175

tag: Hu Breast Cancer S# 175


title: Human breast tumor74

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 184

tag: Hu Breast Cancer S# 184


title: Human breast tumor67

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 177

tag: Hu Breast Cancer S# 177


title: Human breast tumor69

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 179

tag: Hu Breast Cancer S# 179


title: Human breast tumor70

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 180

tag: Hu Breast Cancer S# 180


title: Human breast tumor77

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 187

tag: Hu Breast Cancer S# 187


title: Human breast tumor73

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 183

tag: Hu Breast Cancer S# 183


title: Human breast tumor64

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 174

tag: Hu Breast Cancer S# 174


title: Human breast tumor63

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 172

tag: Hu Breast Cancer S# 172


title: Human breast tumor60

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 167

tag: Hu Breast Cancer S# 167


title: Human breast tumor59

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 166

tag: Hu Breast Cancer S# 166


title: Human breast tumor68

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 178

tag: Hu Breast Cancer S# 178


title: Human breast tumor50

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 157

tag: Hu Breast Cancer S# 157


title: Human breast tumor57

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 164

tag: Hu Breast Cancer S# 164


title: Human breast tumor52

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 159

tag: Hu Breast Cancer S# 159


title: Human breast tumor53

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 160

tag: Hu Breast Cancer S# 160


title: Human breast tumor49

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 156

tag: Hu Breast Cancer S# 156


title: Human breast tumor56

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 163

tag: Hu Breast Cancer S# 163


title: Human breast tumor48

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 155

tag: Hu Breast Cancer S# 155


title: Human breast tumor41

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 147

tag: Hu Breast Cancer S# 147


title: Human breast tumor43

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 149

tag: Hu Breast Cancer S# 149


title: Human breast tumor44

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 150

tag: Hu Breast Cancer S# 150


title: Human breast tumor47

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 154

tag: Hu Breast Cancer S# 154


title: Human breast tumor62

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 170

tag: Hu Breast Cancer S# 170


title: Human breast tumor51

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 158

tag: Hu Breast Cancer S# 158


title: Human breast tumor39

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 145

tag: Hu Breast Cancer S# 145


title: Human breast tumor58

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 165

tag: Hu Breast Cancer S# 165


title: Human breast tumor36

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 141

tag: Hu Breast Cancer S# 141


title: Human breast tumor37

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 142

tag: Hu Breast Cancer S# 142


title: Human breast tumor54

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 161

tag: Hu Breast Cancer S# 161


title: Human breast tumor45

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 151

tag: Hu Breast Cancer S# 151


title: Human breast tumor34

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 139

tag: Hu Breast Cancer S# 139


title: Human breast tumor40

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 146

tag: Hu Breast Cancer S# 146


title: Human breast tumor42

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 148

tag: Hu Breast Cancer S# 148


title: Human breast tumor61

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 169

tag: Hu Breast Cancer S# 169


title: Human breast tumor38

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 144

tag: Hu Breast Cancer S# 144


title: Human breast tumor35

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 140

tag: Hu Breast Cancer S# 140


title: Human breast tumor33

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 138

tag: Hu Breast Cancer S# 138


title: Human breast tumor30

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 135

tag: Hu Breast Cancer S# 135


title: Human breast tumor32

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 137

tag: Hu Breast Cancer S# 137


title: Human breast tumor46

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 153

tag: Hu Breast Cancer S# 153


title: Human breast tumor31

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 136

tag: Hu Breast Cancer S# 136


title: Human breast tumor24

description: human breast tumor RNA

source_name: pool of individual breast tumors

tag: pool of individual breast tumors

source_name: Hu Breast Cancer S# 129

tag: Hu Breast Cancer S# 129


title: Human breast tumor16

description: human breast tumor RNA


title: Human breast tumor7

description: human breast tumor RNA

source_name: "Sample 41,>5 yr survival(82 months) age 54"


title: Human breast tumor17

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 122

tag: Hu Breast Cancer S# 122


title: Human breast tumor19

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 124

tag: Hu Breast Cancer S# 124


title: Human breast tumor14

description: human breast tumor RNA


title: Human breast tumor27

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 132

tag: Hu Breast Cancer S# 132


title: Human breast tumor26

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 131

tag: Hu Breast Cancer S# 131


title: Human breast tumor25

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 130

tag: Hu Breast Cancer S# 130


title: Human breast tumor28

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 133

tag: Hu Breast Cancer S# 133


title: Human breast tumor10

description: human breast tumor RNA

source_name: "Sample 44,>5 yr survival(62 months) age 53"


title: Human breast tumor21

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 126

tag: Hu Breast Cancer S# 126


title: Human breast tumor22

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 127

tag: Hu Breast Cancer S# 127


title: Human breast tumor18

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 123

tag: Hu Breast Cancer S# 123


title: Human breast tumor13

description: human breast tumor RNA

source_name: "Sample 79, <5 yr survival(28 months) age 53"


title: Human breast tumor6

description: human breast tumor RNA

source_name: "Sample 40,>5 yr survival(82 months) age 53"


title: Human breast tumor11

description: human breast tumor RNA

source_name: "Sample 69, <5 yr survival(25 months) age 41"


title: Human breast tumor9

description: human breast tumor RNA

source_name: "Sample 43,>5 yr survival(71 months) age 54"


title: Human breast tumor20

description: human breast tumor RNA

source_name: pool of individual breast tumors

source_name: Hu Breast Cancer S# 125

tag: Hu Breast Cancer S# 125


title: Human breast tumor8

description: human breast tumor RNA

source_name: "Sample 42,>5 yr survival(66 months) age 54"


title: Human breast tumor23

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 128

tag: Hu Breast Cancer S# 128


title: Human breast tumor12

description: human breast tumor RNA

source_name: "Sample 78, <5 yr survival(44 months) age 54"


title: Human breast tumor15

description: human breast tumor RNA


title: Human breast tumor3

description: human breast tumor RNA

source_name: "Sample 34,>5 yr survival(123 months) age 54"


title: Human breast tumor55

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 162

tag: Hu Breast Cancer S# 162


title: Human breast tumor2

description: human breast tumor RNA

source_name: "Sample 32,>5 yr survival(145 months) age 54"


title: BY4743_rotator_rep2

status: Public on Jun 15 2006

city: New Orleans

first: Timothy

last: Hammond

state: LA

address: 1430 Tulane Ave

department: Department of Medicine, Nephrology Section, SL-45

institute: Tulane University Health Sciences Center

description: Saccharomyces cerevisiae strain BY4743 gorwn in a rotating wall vessel (RWV) for 18 hours on a rotator

hyb_protocol: Standard Affymetrix procedures

scan_protocol: Standard Affymetrix procedures

data_processing: Affymetrix Microarray Suite version 5.0

label: Biotin

organism: Saccharomyces cerevisiae

source_name: strain BY4743, grown on rotator

label_protocol: Total RNA (10 µg) was converted into double-stranded cDNA (ds-cDNA) by using SuperScript Choice System (Life Technologies, Rockville, MD) with an oligo(dT) primer containing a T7 RNA polymerase promoter (Genset, San Diego, CA). After second-strand synthesis, the reaction mixture was extracted with phenol-chloroform-isoamyl alcohol, and ds-cDNA was recovered by ethanol precipitation.

growth_protocol: Culture was grown for 18 hours at 30 C in a rotating wall vessel placed on a rotator set at 30 rpm

extract_protocol: Total RNA was extracted using a combination of the hot phenol/glass beads method of Ausubel et al. (Ausubel FM, Brent E, Kingstion RE, Moore DD, Seidman  JG, Smith JA, and Struhl K.  Current Protocols in Molecular Biology, New York: Wiley, 1995) and TRIZOL (Sigma).

tag: BY4743 (MAT a/alpha his3D1, leu2D, met15D ura3D)


title: BY4743_rotator_rep1


title: BY4743_shaker_rep2

description: Saccharomyces cerevisiae strain BY4743 gorwn in a rotating wall vessel (RWV) for 18 hours in a gyrorotatory shaker

source_name: strain BY4743, grown in shaker

growth_protocol: Culture was grown for 18 hours at 30 C in a rotating wall vessel placed in a gyrorotatory shaker at 90 rpm


title: BY4743_shaker_rep1


title: BY4743_static_rep1

description: Saccharomyces cerevisiae strain BY4743 gorwn in a rotating wall vessel (RWV) for 18 hours in a static position

source_name: strain BY4743, grown in static

growth_protocol: Culture was grown for 18 hours at 30 C in a rotating wall vessel placed in a horizontal static position

tag: BY4743 (MAT a/alpha; his3D1, leu2D, met15D ura3D)


title: BY4743_static_rep2

source_name: strain BY4743, grown static


title: 213a-A2:D7

status: Public on Jun 06 2006

city: Stillwater

first: Zhongming

last: Chen

state: OK

address: 264 McElroy Hall

department: Deptment of Physiological Sciences

institute: Oklahoma State University

description: This is a time course study of gene expression profile in type II alveolar epithelial cells isolated from normal, hyperoxia exposed (day 0) and recovering rats (day 1, 3, 5 and 7) using parallel hybridization of DNA micoarray.

organism: Rattus norvegicus

source_name: Normal AEC II

source_name: AEC II on day 7


title: 210a-A2:D7


title: 211b-D0:A2

source_name: AEC II on day 0

source_name: normal AEC II


title: 210b-D1:D0

source_name: AEC II on day 1


title: 213b-D1:D0


title: Human breast tumor1

description: human breast tumor RNA

source_name: pool of individual breast tumors

source_name: "Sample 30,>5 yr survival(142 months) age 54"


title: 211c-D3:D1

source_name: AEC II on day 3


title: 116b-D0:A2


title: 117b-D1:D0


title: 213c-D5:D3

source_name: AEC II on day 5


title: 209c-D3:D1


title: Human breast tumor4

description: human breast tumor RNA

source_name: "Sample 35,>5 yr survival(125 months) age 54"


title: 209a-D7:D5


title: Human breast tumor29

description: human breast tumor RNA

source_name: Hu Breast Cancer S# 134

tag: Hu Breast Cancer S# 134


title: 117c-D5:D3


title: 116c-D3:D1


title: 116a-D7:D5


title: 210c-D5:D3


title: 117a-A2:D7


title: 209b-D0:A2


title: 115b-D3:D1


title: 114c-A2:D7


title: 211a-D7:D5


title: 115a-D0:A2


title: 1114a-D1:D0


title: 113c-D3:D5


title: 112c-D1:D3


title: Mutant (Dmp53NS) irradiated replicate 2

city: Dallas

first: John

middle: M

last: Abrams

state: TX

address: 5323 Harry Hines Blvd

department: Cell Biology

institute: University of Texas Southwestern Medical Center

description: irradiated Mutant (Dmp53NS) embryos

hyb_protocol: standard Affymetrix procedures

scan_protocol: standard Affymetrix procedures

label: biotin

organism: Drosophila melanogaster

source_name: embryos, mutant (Dmp53NS), irradiated

label_protocol: Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.

extract_protocol: Approximately 1 gram of mutant (Dmp53NS strain) embryos was collected 0-2.5 hours after egg laying.  The embryos were aged for 2.5 hours at 25C, treated with 40Gy of gamma radiation, and allowed a 1.5 hour recovery prior to dechorionation. Total RNA was isolated using Trizol (Invitrogen).

tag: Mutant (Dmp53NS), embryos 4-6.5 hours after egg laying, irradiated


title: 113b-D0:D1


title: 111c-A2:Day0


title: 110c-Day5:day7


title: Mutant (Dmp53NS) irradiated replicate 1

description: irradiated Mutant (Dmp53NS) embryos


title: 111a-Day0:day1


title: 112b-A2:D0


title: Mutant (Dmp53NS) control replicate 1

description: Mutant (Dmp53NS) embryos

source_name: embryos, mutant (Dmp53NS), control

extract_protocol: Approximately 1 gram of mutant (Dmp53NS strain) embryos was collected 0-2.5 hours after egg laying.  The embryos were aged for 2.5 hours at 25C, mock-treated, and allowed a 1.5 hour recovery prior to dechorionation. Total RNA was isolated using Trizol (Invitrogen).

tag: Mutant (Dmp53NS), embryos 4-6.5 hours after egg laying, control


title: WT (w1118) irradiated replicate 2

description: irradiated Wild type (w1118) embryos

source_name: embryos, WT (w1118), irradiated

extract_protocol: Approximately 1 gram of wild-type (w1118 strain) embryos was collected 0-2.5 hours after egg laying.  The embryos were aged for 2.5 hours at 25C, treated with 40Gy of gamma radiation, and allowed a 1.5 hour recovery prior to dechorionation. Total RNA was isolated using Trizol (Invitrogen).

tag: Wild type (w1118), embryos 4-6.5 hours after egg laying, irradiated


title: 112a-D5:D7


title: 111b-day3:day5


title: WT (w1118) control replicate 2

description: Wild type (w1118) embryos

source_name: embryos, WT (w1118), control

extract_protocol: Approximately 1 gram of wild-type (w1118 strain) embryos was collected 0-2.5 hours after egg laying.  The embryos were aged for 2.5 hours at 25C, mock-treated, and allowed a 1.5 hour recovery prior to dechorionation. Total RNA was isolated using Trizol (Invitrogen).

tag: Wild type (w1118), embryos 4-6.5 hours after egg laying, control


title: 110a-A2:D0


title: 115c-D7:D5


title: WT (w1118) control replicate 1

description: Wild type (w1118) embryos


title: 110b-Day1:day3


title: WT (yw) control replicate 1

description: Wild type (yw) embryos

source_name: embryos, WT (yw), control

extract_protocol: Approximately 1 gram of wild-type (yw strain) embryos was collected 0-2.5 hours after egg laying.  The embryos were aged for 2.5 hours at 25C, mock-treated, and allowed a 1.5 hour recovery prior to dechorionation. Total RNA was isolated using Trizol (Invitrogen).

tag: Wild type (yw), embryos 4-6.5 hours after egg laying, control


title: Mutant (Dmp53NS) control replicate 2

description: Mutant (Dmp53NS) embryos


title: Human breast tumor5

description: human breast tumor RNA

tag: pool of individual breast tumors

source_name: "Sample 37,>5 yr survival(88 months) age 54"


title: WT (w1118) irradiated replicate 1

description: irradiated Wild type (w1118) embryos


title: WT (yw) irradiated replicate 1

description: irradiated Wild type (yw) embryos

source_name: embryos, WT (yw), irradiated

extract_protocol: Approximately 1 gram of wild-type (yw strain) embryos was collected 0-2.5 hours after egg laying.  The embryos were aged for 2.5 hours at 25C, treated with 40Gy of gamma radiation, and allowed a 1.5 hour recovery prior to dechorionation. Total RNA was isolated using Trizol (Invitrogen).

tag: Wild type (yw), embryos 4-6.5 hours after egg laying, irradiated


title: SHR-vehicle pool sample3

status: Public on Jun 03 2006

city: Bethesda

first: Juan

last: Saavedra

state: MD

address: 10 Center Drive

department: Section on Pharmacology

institute: NIMH

description: brain microvessels from SHR treated with vehicle for 4 weeks subcutaneously by osmotic minipump.

source_name: brain microvessels

label_protocol: Approximately 15 µg of total RNA was processed to produce biotinylated cRNA targets.

extract_protocol: Total RNA was extracted from brain microvessels with TRIzol Reagent (Invitrogen), cleaned with RNeasy Mini Kit (Qiagen). The sample was pooled with the total RNA from 5 rats.

tag: 12-week-old 12-week-old spontaneously hypertensive rats (SHR), male, brain microvessels, treated with vehicle for 4 weeks subcutaneously by osmotic minipump


title: SHR-vehicle pool sample1

tag: 12-week-old spontaneously hypertensive rats (SHR), male, brain microvessels, treated with vehicle for 4 weeks subcutaneously by osmotic minipump.


title: 113-D7:A2

source_name: AEC II on day 7


title: WKY-candesartan pool sample2

description: brain microvessels from WKY treated with AT1 antagonsit (candesartan, 0.3 mg/kg/day) for 4 weeks subcutaneously by osmotic minipump.

tag: 12-week-old Wistar Kyoto (WKY), male, brain microvessels, treated with AT1 antagonsit (candesartan, 0.3 mg/kg/day) for 4 weeks subcutaneously by osmotic minipump.


title: Pachytene spermatocytes: U74Bv2

status: Public on Jun 01 2006

city: Pullman

first: Lizhong

last: Yang

address: 531 Fulmer Hall/POB 644660

department: School of Molecular Biosciences

institute: Washington State University

description: Singlet Sample

label: Affy one-cycle target labeling

organism: Mus musculus

source_name: Total RNA from isolated germ cell types

tag: Pachytene spermatocytes


title: SHR-candesartan pool sample1

description: brain microvessels from SHR treated with candesartan (0.3 mg/kg/day) for 4 weeks subcutaneously by osmotic minipump.

tag: 12-week-old 12-week-old spontaneously hypertensive rats (SHR), male, brain microvessels, treated with AT1 antagonsit (candesartan, 0.3 mg/kg/day) for 4 weeks subcutaneously by osmotic minipump.


title: SHR-vehicle pool sample2

tag: 12-week-old 12-week-old spontaneously hypertensive rats (SHR), male, brain microvessels, treated with vehicle for 4 weeks subcutaneously by osmotic minipump.


title: WKY-vehicle pool sample2

description: brain microvessels from WKY treated with vehicle for 4 weeks subcutaneously by osmotic minipump.

tag: 12-week-old Wistar Kyoto (WKY), male, brain microvessels, treated with vehicle for 4 weeks subcutaneously by osmotic minipump.


title: WKY-vehicle pool sample1


title: Round spermatids: U74Bv2

description: Singlet Sample

tag: Round spermatids


title: WKY-candesartan pool sample1


title: Type A spermatogonia: U74Bv2

description: Singlet Sample

tag: Type A spermatogonia


title: Pachytene spermatocytes: U74Cv2

description: Singlet Sample


title: Type B spermatogonia: U74Cv2

description: Singlet Sample

tag: Type B spermatogonia


title: Round spermatids: U74Av2

description: Singlet Sample


title: Round spermatids: U74Cv2

description: Singlet Sample


title: Type A spermatogonia: U74Cv2

description: Singlet Sample


title: Type A spermatogonia:  U74Av2

description: Singlet Sample


title: Type B spermatogonia: U74Bv2

description: Singlet Sample


title: Type B spermatogonia: U74Av2

description: Singlet Sample


title: 16011841010049_GEO

status: Public on May 26 2006

city: Raleigh

first: Huaqin

last: Pan

state: NC

institute: North Carolina State University

description: This experiment was designed to analyze transcriptional changes that occur when the fungal plant pathogen M. grisea is shifted from a complete media to a nitrogen-starved media.  Comparisons were made in the following way between fungal mycelial grown in minimal media supplemented with a nitrogen source (MM+N) and minimal media without a nitrogen source (NS)

data_processing: LOWESS

organism: Pyricularia grisea

source_name: 48-hour old nitrogen-starved mycelia (NS_48)

source_name: 48-hour old wild type mycelia (MM+N_48)

tag: 48-hour old wild type mycelia (MM+N_48)


title: 1601184......._GEO

tag: 48-hour old nitrogen-starved mycelia (NS_48)


title: 16011842010051_GEO

source_name: 12-hour old wild type mycelia (MM+N_12)

tag: 12-hour old wild type mycelia (MM+N_12)

source_name: 12-hour old nitrogen-starved mycelia (NS_12)


title: 16011842010045_GEO

tag: 12-hour old nitrogen-starved mycelia (NS_12)


title: 114b-D5:D3

source_name: AEC II on day 5

source_name: AEC II on day 3


title: 16011842010049_GEO


title: SRYU_RRE2_UK1 vs BH129_Aerobic_7hr_LB_kit_Temp.37C_5D808_3

status: Public on Mar 04 2006

city: Irvine

first: Michael

last: McClelland

state: CA

address: 132 Med Surge I

department: Microbiology & Molecular Genetics

institute: University of California, Irvine

description:
Salmonella typhimurium
User - GYun
Date_of_Scan = 02/26/2005

organism: Salmonella enterica subsp. enterica serovar Typhimurium

source_name: BH129 RNA(isogenic UK1 ptsI mutant)

source_name: UK1 RNA


title: SHR-candesartan pool sample2


title: SRYU_RRE2_UK1 vs BH129_Aerobic_7hr_LB_kit_Temp.37C_5D808_1


title: SRYU_RRE2_UK vs BH129_Aerobic_7hr_LB_Temp.37C_5D629_3

description:
Salmonella typhimurium
User - GYun
Date_of_Scan = 01/10/2005


title: SRYU_ RRE2_UK1 vs BH129_Aerobic_7hr_LB_kit_Temp.37C_5D807_2


title: SRYU_RRE2_UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D736_2


title: SRYU_RRE2_UK vs BH129_Aerobic_7hr_LB_Temp.37C_5D629_2


title: SRYU_ RRE2_ UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D627_3


title: SRYU_RRE2_UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D628_3


title: SRYU_RRE2_UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D736_1


title: SRYU_ RRE2_UK1 vs BH129_Aerobic_7hr_LB_kit_Temp.37C_5D807_1


title: SRYU_ RRE2_UK1 vs BH129_Aerobic_7hr_LB_kit_Temp.37C_5D807_3


title: SRYU_RRE2_UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D628_1


title: SRYU_RDE2_14028s _M9 _pH7.0_Citrate_Temp.37C_OD 0.50_5D735_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett_green filter_70)
User - GYun
Date_of_Scan = 02/26/2005

source_name: 14028s gDNA


title: SRYU_ RRE2_ UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D627_2


title: SRYU_ RRE2_ UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D627_1


title: SRYU_RRE2_UK vs BH129_Aerobic_7hr_LB_Temp.37C_5D629_1


title: SRYU_RDE2_14028s _M9 _pH7.0_Citrate_Temp.37C_OD 0.50_5D735_2


title: 16011842010044_GEO


title: SRYU_RDE2_14028s _M9 _pH7.0_Citrate_Temp.37C_OD 0.50_5D735_1


title: Pachytene spermatocytes: U74Av2

description: Singlet Sample


title: SRYU_RRE2_UK1 vs BH129_Aerobic_7hr_LB_kit_Temp.37C_5D808_2


title: SRYU_RRE2_UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D628_2


title: SRYU_RDE2_14028s _M9 _pH9.0_Glc_Temp.37C_OD value 0.68_5D744_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_95)
User - GYun
Date_of_Scan = 02/14/2005


title: SRYU_RDE2_14028s _M9 _pH9.0_Glc_Temp.37C_OD 0.68\_5D728_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_95)
User - GYun
Date_of_Scan = 02/26/2005


title: SRYU_RDE2_14028s _M9 _pH9.0_Glc_Temp.37C_OD 0.68\_5D728_2


title: SRYU_RRE2_UK vs BH129(Anaerobic)_OD 0.35_Temp.37C_5D736_3


title: SRYU_RDE2_14028s _M9_pH7.0_Glc_OD 0.46_Temp.28C_5D733_1

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_65)
User - GYun
Date_of_Scan = 02/26/2005


title: SRYU_RDE2_14028s _M9 _pH7.0_Citrate_Temp.37C_OD 0.50_5D734_1


title: SRYU_RDE2_14028s _M9 _pH9.0_Glc_Temp.37C_OD value 0.68_5D744_1


title: SRYU_RDE2_14028s _M9 _pH7.0_Citrate_Temp.37C_OD 0.50_5D734_2


title: SRYU_RDE2_14028s _M9 _pH9.0_Glc_Temp.37C_OD 0.68\_5D728_1


title: SRYU_RDE2_14028s _M9 _pH7.0_Citrate_Temp.37C_OD 0.50_5D734_3


title: SRYU_RDE2_14028s _M9_pH7.0_Glc_OD 0.46_Temp.28C_5D733_2


title: SRYU_RDE2_14028s _M9_pH7.0_Glc_OD 0.46_Temp.28C_5D733_3


title: SRYU_ RDE2_14028s _M9 _pH7.0_Glc_Temp.37_OD value 0.71_5D740_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_100)
User - GYun
Date_of_Scan =02/14/2005


title: SRYU_RDE2_14028s _M9 _145_pH7.0_Glc_Temp.37_OD value 0.71_5D739_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_100)
User - GYun
Date_of_Scan = 02/14/2005


title: SRYU_RDE2_14028s _M9 _18C_pH7.0_Glc_Temp.28C_OD value 0.46_5D743_1

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_65)
User - GYun
Date_of_Scan =02/14/2005


title: SRYU_ RDE2_14028s _M9 _pH7.0_Glc_Temp.37_OD value 0.71_5D740_1


title: SRYU_RDE2_14028s _M9 _38C_pH7.0_Glc_Temp.28C_OD value 0.46_5D743_3


title: SRYU_RDE2_14028s _M9 _pH9.0_Glc_Temp.37C_OD value 0.68_5D744_2


title: SRYU_ RDE2_14028s _M9 _pH7.0_Glc_Temp.37_OD value 0.71_5D740_2


title: SRYU_RDE2_14028s _M9 _28C_pH7.0_Glc_Temp.28C_OD value 0.46_5D743_2


title: SRYU_RDE2_14028s_LB(173)_Temp.37_OD value 0.90_5D700_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_113)
User - GYun
Date_of_Scan = 02/04/2005


title: SRYU_RDE2_14028s_M9_pH7.0_Acetate_OD145containgBASE_Temp.37_OD value 0.36_5D699_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_50)
User - GYun
Date_of_Scan = unknown 2005


title: SRYU_RDE2_14028s_M9_pH7.0_Acetate_OD145containgBASE_Temp.37_OD value 0.36_5D699_2


title: SRYU_RDE2_14028s_M9_pH8.0_Glc_OD145containgBASE_Temp.37_OD value 0.77_5D697_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_108)
User - GYun
Date_of_Scan = 02/04/2005


title: SRYU_RDE2_14028s_M9_pH7.0_Glycerol_OD145containgBASE_Temp.37_OD value 0.54_5D698_2

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_75)
User - GYun
Date_of_Scan = 02/04/2005


title: SRYU_RDE2_14028s_M9_pH7.0_Glycerol_OD145containgBASE_Temp.37_OD value 0.54_5D698_3


title: SRYU_RDE2_14028s_M9_pH7.0_Glycerol_OD145containgBASE_Temp.37_OD value 0.54_5D698_1


title: SRYU_RDE2_14028s_LB(173)_Temp.37_OD value 0.90_5D700_1


title: SRYU_RDE2_14028s_LB(173)_Temp.37_OD value 0.90_5D700_2


title: SRYU_RDE2_14028s _M9 _145_pH7.0_Glc_Temp.37_OD value 0.71_5D739_1


title: SRYU_RDE2_14028s_M9_pH9.0_Glucose_OD145containgBASE_Temp.37_OD value 0.68_5D696_2

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter 95)
User - GYun
Date_of_Scan = 02/04/2005


title: SRYU_RDE2_14028s _M9 _145_pH7.0_Glc_Temp.37_OD value 0.71_5D739_2


title: SRYU_RDE2_14028s_M9_pH8.0_Glc_OD145containgBASE_Temp.37_OD value 0.77_5D697_2


title: SRYU_RDE2_14028s_M9_pH8.0_Glc_OD145containgBASE_Temp.37_OD value 0.77_5D697_1


title: SRYU_RDE2_14028s_M9_pH9.0_Glucose_OD145containgBASE_Temp.37_OD value 0.68_5D696_3


title: SRYU_RDE2_14028s_M9_pH9.0_Glucose_OD145containgBASE_Temp.37_OD value 0.68_5D696_1


title: SRYU_RDE2_14028s_M9_pH5.5_Glc_OD145containgBASE_Temp.37C_OD value 0.62_5D695_2

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter 87)
User - GYun
Date_of_Scan = 02/04/2005

source_name: RNA


title: SRYU_RDE2_14028s_M9_pH5.5_Glc_OD145containgBASE_Temp.37C_OD value 0.62_5D695_1


title: SRYU_RDE2_14028s_M9_pH5.5_Glc_OD145containgBASE_Temp.37C_OD value 0.62_5D695_3


title: SRYU_RDE2_14028s _M9 _pH7.0_ace_low_Temp.37_OD value 0.36_5D675_2

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_50)
User - GYun
Date_of_Scan = 01/23/2005


title: SRYU_RDE2_14028s _M9 _pH8.0_Glc_low_Temp.37_OD value 0.77_5D673_2

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_108)
User - GYun
Date_of_Scan = 01/23/2005


title: SRYU_RDE2_14028s _M9 _pH7.0_Glc_Temp.37_OD Value 0.71_5D672_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_100)
User - GYun
Date_of_Scan =01/23/2005


title: SRYU_RDE2_14028s _M9 _pH7.0_Gly_Temp.37_OD value 0.54_5D674_1

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_75)
User - GYun
Date_of_Scan = 01/23/2005


title: SRYU_RDE2_14028s _M9 _pH7.0_ace_low_Temp.37_OD value 0.36_5D675_1


title: SRYU_RDE2_14028s _M9 _pH7.0_Glc_Temp.37_OD Value 0.71_5D672_2


title: SRYU_RDE2_14028s _M9 _pH8.0_Glc_low_Temp.37_OD value 0.77_5D673_1


title: SRYU_RDE2_14028s _M9 _pH7.0_Gly_Temp.37_OD value 0.54_5D674_3


title: SRYU_RDE2_14028s _M9 _pH8.0_Glc_low_Temp.37_OD value 0.77_5D673_3


title: SRYU_RDE2_14028s _M9 _pH7.0_Gly_Temp. 37_OD Value 0.54_5D666_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase(klett value_green filter_75)
User - GYun
Date_of_Scan = 01/20/2005


title: SRYU_RDE2_14028s _M9 _pH7.0_ace_Temp.37_OD Value 0.36_5D667_1

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_50)
User - GYun
Date_of_Scan =01/20/2005


title: SRYU_RDE2_14028s _M9 _pH7.0_Gly_Temp. 37_OD Value 0.54_5D666_2


title: SRYU_RDE2_14028s _M9 _pH7.0_Gly_Temp.37_OD value 0.54_5D674_2


title: SRYU_RDE2_14028s _M9 _pH7.0_Gly_Temp. 37_OD Value 0.54_5D666_1


title: SRYU_RDE2_14028s _M9 _pH7.0_ace_Temp.37_OD Value 0.36_5D667_2


title: SRYU_RDE2_14028s _M9 _pH8.0_Glc_Temp.37_OD Value 0.77_5D665_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_108)
User - GYun
Date_of_Scan =01/20/2005


title: SRYU_RDE2_14028s _M9 _pH8.0_Glc_Temp.37_OD Value 0.77_5D665_2


title: SRYU_RDE2_14028s_M9 _pH5.5_Glc_Temp.37_OD value 0.62_5D663_1

description:
Salmonella typhimurium 14028s Expression at the early exponential phase(klett value;87)
User - GYun
Date_of_Scan = 01-20-2005


title: SRYU_RDE2_14028s _M9 _pH8.0_Glc_Temp.37_OD Value 0.77_5D665_1


title: SRYU_RDE2_14028s _M9 _pH7.0_ace_low_Temp.37_OD value 0.36_5D675_3


title: SRYU_ RDE2_14028s_M9_pH7.0_Glc_Temp.37_OD Value 0.71_5D664_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase(klett value_green filter_100)
User - GYun
Date_of_Scan = 01/20/2005


title: SRYU_RDE2_14028s _M9 _pH5.5_Glc_Temp.37_OD Value 0.62_5D671_1

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_87)
User - GYun
Date_of_Scan = 01/23/2005


title: SRYU_RDE2_14028s _M9 _pH7.0_Glc_Temp.37_OD Value 0.71_5D672_1


title: SRYU_RDE2_14028s_M9 _pH5.5_Glc_Temp.37_OD value 0.62_5D663_3


title: SRYU_ RDE2_14028s_M9_pH7.0_Glc_Temp.37_OD Value 0.71_5D664_2


title: SRYU_RDE2_14028s_M9_pH7.0_Acetate_OD145containgBASE_Temp.37_OD value 0.36_5D699_1


title: SRYU_RDE2_14028s _M9 _pH5.5_Glc_Temp.37_OD Value 0.62_5D671_2


title: SRYU_RDE2_14028s_M9 _pH5.5_Glc_Temp.37_OD value 0.62_5D663_2


title: SRYU_RDE2_14028s _M9 _pH5.5_Glc_Temp.37_OD Value 0.62_5D671_3


title: 1% ammonium oxalate_pH 6.8_rep1

status: Public on Dec 08 2005

first: Todd

middle: Robert

last: Klaenhammer

department: Department of Food, Bioprocessing, and Nutrition Sciences

description: The whole genome array containing 97.4% of the annotated genes of L. acidophilus was used to analyze the global gene expression of cells exposed to 70 mM ammonium oxalate for 30 min at pH 6.8.

data_processing: Background substracted, median normalized ratios were log2 transformed.

organism: Lactobacillus acidophilus

source_name: Log-phase cells (OD600=0.3), 1% ammonium oxalate, pH 6.8, 30 min

tag: Strain

value: NCFM

tag: Stage

value: Early log phase cells

tag: Culture media

value: MRS broth containing 1% ammonium oxalate

source_name: Log-phase cells (OD600=0.3), fresh MRS broth, pH 6.8, 30 min

value: MRS broth


title: P21_cy5_4

status: Public on Oct 15 2005

first: Julie

last: Harris

department: Otolaryngology-HNS

institute: University of Washington

description: Cochlear nuclei pooled from 5 pups to generate one sample for one replicate hybridization out of 5.  For this replicate RNA underwent one round of linear amplification.  Cohybridized with P7_cy3_4.

data_processing: Background Subtracted Median Intensity

source_name: Cochlear nucleus

value: C57Bl6/J Cochlear nucleus tissue from P21


title: P7_cy3_4

description: Cochlear nuclei pooled from 5 pups to generate one sample for one replicate hybridization out of 5 replicates.  In this replicate, RNA underwent one round of linear amplification.  Cohybridized with P21_cy5_4.

value: C57Bl6/J Cochlear nucleus tissue from P7


title: P21_cy5_3

description: Cochlear nuclei pooled from 5 pups to generate one sample for one replicate hybridization out of 5.  For this replicate RNA underwent one round of linear amplification.  Cohybridized with P7_cy3_3.


title: P21_cy3

description: Cochlear nuclei pooled from 20 pups to generate one sample for one replicate hybridization out of 5.  This replicate was a dye flip.  Cohybridized with P7_cy5.


title: P7_cy5

description: Cochlear nuclei pooled from 20 pups to generate one sample for one replicate hybridization out of 5 replicates.  In this replicate, dyes were flipped.  Cohybridized with P21_cy3.


title: 1% ammonium oxalate_pH 6.8_rep2

source_name: Early log phase cells, fresh MRS broth, pH 6.8, 30 minutes

value: Early log-phase (OD600=0.3)

tag: Culture medium

source_name: Early log phase cells, MRS broth containing 1% ammonium oxalate, pH 6.8, 30 minutes

tag: containing 1% ammonium oxalate


title: tumor immune evasion - P3 cell line

status: Public on Dec 06 2005

city: Baltimore

first: Ken-Yu

last: Lin

address: 720 Rutland Ave, Ross 512

department: Pathology

institute: Johns Hopkins University School of Medicine

description: This is one of 4 biological replicates for P3 cell line.

data_processing: background correction made with RMA, Quantile Normalization, GC-RMA

label: biotin-labeled cRNA, detected with streptavidin phycoerythin conjugate

source_name: mouse cancer cell line, P3

growth_protocol: The cell line was cultured in vitro in 10-cm dishes until 70-75% confluency and then total RNA was isolated.

extract_protocol: Total RNA was extracted using TRIzol reagent (Invitrogen), followed by a clean-up step using RNeasy mini kit (Qiagen).

treatment_protocol: P3 is derived from P0 through 3 rounds of in vivo immune selection.  P3 is a highly immune resistant cell line.

tag: strain - C57BL/6

tag: gender - female

tag: tissue - P0/TC-1 is a cancer cell line derived from lung fibroblasts.  P3 is derived from P0.


title: tumor immune evasion - P3 cell line-replicate 4

tag: tissue - P0/TC-1 is a cancer cell line derived from lung fibroblasts. P3 is derived from P0.


title: P21_cy5_2

description: Cochlear nuclei pooled from 20 pups to generate one sample for one replicate hybridization out of 5.  Cohybridized with P7_cy3_2.


title: P7_cy3_2

description: Cochlear nuclei pooled from 20 pups to generate one sample for one replicate hybridization out of 5 replicates.  Cohybridized with P21_cy5_2.


title: NEO-1_HG-U133 Plus 2_Rep

status: Public on Oct 19 2005

city: Montreal

first: Johanne

last: Tremblay

state: QUE

country: Canada

institute: CHUM Research Center, Hotel-Dieu

description: HEK293 cells were transfected with pcDNAI/Neo (Invitrogen) as control plasmid. Stable transfectants were synchronized and grown in the presence of 10% FBS for 48 h. Total RNAs were purified with the mini RNeasy kit (Qiagen).

data_processing: Chip was normalized using all probe sets scaling option and target signal at 500 (GCOS1.2).

label: Streptavidin Phycoerythrin

source_name: HEK293 cells

tag: Kidney HEK293 cells


title: P7_cy3_1

description: Cochlear nuclei pooled from 20 pups to generate one sample for one replicate hybridization out of 5 replicates.  Cohybridized with P21_cy5_1.


title: tumor immune evasion - P0 cell line-replicate 4

description: This is one of 4 biological replicates for P0 control cell line.

source_name: mouse cancer cell line, P0/TC-1

treatment_protocol: P0 is a cancer cell line susceptible to immune attack.  This is a control cell line.

tag: tissue - P0/TC-1 is a cancer cell line derived from lung fibroblasts.


title: tumor immune evasion - P0 cell line-replicate 3

tag: tissue - P0/TC-1 is a cancer cell line derived from lung fibroblasts


title: HCaRG-9_HG-U133 Plus 2_Rep

description: HEK293 cells were transfected with pcDNAI/Neo (Invitrogen) plasmid containing HCaRG. Stable transfectants, overexpressing HCaRG, were synchronized and grown in the presence of 10% FBS for 48 h. Total RNAs were purified with the mini RNeasy kit (Qiagen).


title: SRYU_RDE2_14028s _M9 _pH7.0_ace_Temp.37_OD Value 0.36_5D667_3

description:
Salmonella typhimurium 14028s Expression at the early exponential phase (klett value_green filter_50)
User - GYun
Date_of_Scan =01/20/2005


title: tumor immune evasion - P0 cell line


title: tumor immune evasion - P0 cell line-replicate 2


title: P21_cy5_1

description: Cochlear nuclei pooled from 20 pups to generate one sample for one replicate hybridization out of 5.  Cohybridized with P7_cy3_1.


title: P7_cy3_3

description: Cochlear nuclei pooled from 5 pups to generate one sample for one replicate hybridization out of 5 replicates.  In this replicate, RNA underwent one round of linear amplification.  Cohybridized with P21_cy5_3.


title: Skin_PsoriasisActive_S23P

status: Public on Oct 01 2005

city: Perth

first: William

middle: D.

last: Kenworthy

address: 90 South Street

department: Centre for Bioinformatics and Biological Computing

country: Australia

institute: Murdoch University

description: Sample was processed using the standard affymetrix protocols.

data_processing: Affymetrix MAS 5.0 software, using normalisation=1 and target=200

label: ENZO kit

source_name: Skin sample from an area of psoriasis active skin from a psoriasis active individual

tag: Japanese individual with active psoriasis


title: tumor immune evasion - P3 cell line-replicate 2


title: Skin_PsoriasisInactive_S23N

source_name: Skin sample from an area of psoriasis inactive skin from a psoriasis active individual


title: Skin_PsoriasisActive_S24P


title: Skin_PsoriasisInactive_S24N


title: Skin_PsoriasisInactive_S29N


title: Skin_PsoriasisActive_S29P


title: SRYU_ RDE2_14028s_M9_pH7.0_Glc_Temp.37_OD Value 0.71_5D664_1

description:
Salmonella typhimurium 14028s Expression at the early exponential phase(klett value_green filter_100)
User - GYun
Date_of_Scan = 01/20/2005


title: Skin_PsoriasisActive_S21P


title: 3000070265A

status: Public on Sep 20 2005

last: Leigh

department: Microbiology

description: Measurement of differences in transcriptional expression between wild-type S2 vs EHB mutant S40

data_processing: Cy3/Cy5 Ratio after LOESS normalization

organism: Methanococcus maripaludis

tag: Wild-type S2 vs EHB mutant S40


title: 3000070273A


title: 3000070272B


title: 3000070265B


title: Skin_PsoriasisFree_N09

source_name: Skin sample from a psoriasis free individual

tag: psoriasis free Japanese individual


title: 3000070266A


title: 3000070272A


title: 3000070273B


title: 3000070262B


title: MMP_S40_S2

type: protein

first: Murray

last: Hackett

address: HSB H330 1959 NE Pacific Street

department: Chemical Engineering

description: Wild-type S2 vs EHB mutant S40

data_processing: log2(average ratio) of Wild-type S2 vs EHB mutant S40

label: 14N and 15N

molecule: protein

tag: EHB mutant S40

tag: Wild-type S2


title: 3000070266B


title: 3000069793A


title: 3000069793B


title: MMP_qualitative

description: Methanococccus maripaludis samples analyzed through ion trap mass spectrometer from Nov. 2002 to Jan. 2005

data_processing: Number of unique peptides identified

source_name: Methanococcus maripaludis samples run through ion trap mass spectrometer in Murray Hackett's lab, Univ. of Washington

tag: Methanococcus maripaludis


title: 3000070263A


title: 3000070262A


title: 3000070263B


title: 3000069792B


title: 3000069792A


title: C19 vs Cl56 MEL cells

status: Public on Sep 16 2005

city: Rockville

first: Alexandra

middle: Geraldine

last: Dace

address: 9600 Gudelsky Drive

department: University of Maryland Biotechnology Institute

institute: University of Maryland

description: Hybridization was performed using C19 and Cl56 mRNA after HMBA-induction for 5 days (differentiation status 90% for C19 cells).

source_name: C19-parental murine erythroleukemia cells

source_name: Cl56-differentiation blocked, c-Myc overexpressing murine eryhtroleukemia cells


title: Skin_PsoriasisInactive_S21N


title: tumor immune evasion - P3 cell line-replicate 3


title: PKBa-/- MEF time 48 replicate 4

status: Public on Sep 01 2005

city: Basel

first: Edward

last: Oakeley

address: Maulbeerstrasse 66

country: Switzerland

institute: FMI

description: PKBa -/- mouse embryonic fibroblasts (MEFs) were generated from 13.5-day-old embryos

data_processing: Robust multichip analysis (BioConductor)

source_name: Mouse embryo fibroblast

label_protocol: Approximately 8 µg of total RNA was processed to produce biotinylated cRNA targets.

extract_protocol: Mouse embryonic fibroblasts (MEFs) were generated from 13.5-day-old embryos obtained from heterozygous PKBa mice intercrosses (Yang et al., 2003). Briefly, after dissection of head and visceral organs for genotyping, embryos were minced and trypsinized for 30 min at 37°C. Embryonic fibroblasts were then plated and maintained in Dulbecco’s Modified Eagle Medium (DMEM) with 10% foetal calf serum (FCS) (Life Technologies), 100 units/ml of penicillin and 100 mg/ml of streptomycin at 37°C in an atmosphere of 5% CO2. All experiments were performed with wild-type and PKBa-/- MEFs between 15-20 passages. To induce adipocyte differentiation, 2-day-postconfluent cells (day 0) were treated with DMEM supplemented with 10% FCS, 8 mg/ml biotin, 4 mg/ml pantothenate, 0.5 mM 3-isobutyl-1-methylxanthine, 1 mM dexamethasone and 10 mg/ml insulin (all from Sigma). Total RNA was extracted from cells using TRIzol (Invitrogen) according to the manufacturer’s instructions.

tag: Wild type MEFs from 13.5 day embryos


title: wild type MEF time 6 replicate 4

description: Wild type mouse embryonic fibroblasts (MEFs) were generated from 13.5-day-old embryos


title: wild type MEF time 48 replicate 3


title: wild type MEF time 24 replicate 4


title: PKBa-/- MEF time 6 replicate 3


title: PKBa-/- MEF time 0 replicate 3


title: PKBa-/- MEF time 0 replicate 4


title: wild type MEF time 0 replicate 4


title: PKBa-/- MEF time 6 replicate 4


title: PKBa-/- MEF time 24 replicate 3


title: wild type MEF time 6 replicate 3


title: wild type MEF time 48 replicate 4


title: PKBa-/- MEF time 48 replicate 3


title: PKBa-/- MEF time 48 replicate 2


title: wild type MEF time 24 replicate 3


title: PKBa-/- MEF time 24 replicate 2


title: PKBa-/- MEF time 24 replicate 1


title: PKBa-/- MEF time 48 replicate 1


title: PKBa-/- MEF time 2 replicate 2


title: PKBa-/- MEF time 2 replicate 1


title: PKBa-/- MEF time 6 replicate 2


title: wild type MEF time 24 replicate 2


title: wild type MEF time 48 replicate 2


title: PKBa-/- MEF time 0 replicate 2


title: PKBa-/- MEF time 0 replicate 1


title: wild type MEF time 48 replicate 1


title: wild type MEF time 24 replicate 1


title: PKBa-/- MEF time 24 replicate 4


title: wild type MEF time 0 replicate 3


title: wild type MEF time 2 replicate 2


title: wild type MEF time 6 replicate 2


title: wild type MEF time 2 replicate 1


title: wild type MEF time 0 replicate 1


title: wild type MEF time 0 replicate 2


title: wild type MEF time 6 replicate 1


title: be-3_ae-5

status: Public on Aug 31 2005

city: Trieste

first: Alberto

last: Pallavicini

address: 9 Piazzale Valmaura

department: Biology

country: Italy

institute: University of Trieste

description: low energy diet animal sample in channel 1 high energy diet animal sample in channel 2in

organism: Sus scrofa

source_name: low energy sus muscle

source_name: high energy sus muscle


title: be-5_ae-3


title: 61-5_41-3


title: 142-3_40-5


title: 49-3_40-5

description:
low energy diet animal sample in channel 1
high energy diet animal sample in channel 2


title: 61-3_41-5


title: 49-5_40-3


title: 142-5_40-3


title: PKBa-/- MEF time 6 replicate 1


title: RH_RRE2_14028_cheZ_3h_plate_4D_3

status: Public on Aug 23 2005

city: Austin

first: Rasika

last: Harshey

department: Section of Molecular Genetics and Microbiology

institute: Institute of Cellular and Molecular Biology

description:
Typhimurium 14028 wt and cheZ mutant transcripts after 3h growth on plate
User - TWang
Date_of_Scan = 2004/01/22 11:17:25

source_name: Typhimurium 14028 wt

source_name: Typhimurium 14028 cheZ mutant


title: RH_RRE2_14028_cheZ_3h_plate_4D_2


title: RH_RRE2_14028_cheA_3h_plate_4D_3

description:
Typhimurium 14028 wt and cheA mutant transcripts after 3h growth on plate
User - TWang
Date_of_Scan = 2004/01/22 11:32:45

source_name: Typhimurium 14028 cheA mutant


title: RH_RRE2_14028_cheY_3h_plate_4D_3

description:
Salmonella typhimurium 14028 wt and cheY mutant transcripts after 3h growth on plates
User - TWang
Date_of_Scan = 2004/01/16 11:19:50

source_name: Typhimurium 14028_WT

source_name: Typhimurium 14028_cheY


title: RH_RRE2_14028_cheZ_3h_plate_4D_1


title: RH_RRE2_14028_cheY_3h_plate_4D_1


title: RH_RRE2_14028_cheB_3h_plate_4D_2

description:
Typhimurium 14028 wt and cheB mutant transcripts after 3h growth on plate
User - TWang
Date_of_Scan = 2004/01/22 11:49:19

source_name: Typhimurium 14028 cheB mutant


title: RH_RRE2_14028_cheA_3h_plate_4D_2


title: RH_RRE2_14028_cheB_3h_plate_4D_1


title: RH_RRE2_14028_cheB_3h_plate_4D_3


title: RH_RRE2_14028_cheY_3h_plate_4D_2


title: RH_RRE2_14028wt_14028cheYflgM_3h_plate_5D_6

description:
Typhimurium 14028 wt and cheY flgM mutant transcripts after 3h growth on plate
User - TWang
Date_of_Scan = 2005/01/13 13:15:49

source_name: Typhimurium 14028 cheY flgM double mutant


title: RH_RRE2_14028wt_14028cheYflgM_3h_plate_5D_5


title: RH_RRE2_14028_cheA_3h_plate_4D_1


title: RH_RRE2_14028flgM_14028wt_3h_plate_5D_1

description:
Typhimurium 14028 flgM mutant and wt transcripts after 3h growth on plate
User - TWang
Date_of_Scan = 2004/11/17 13:01:19

source_name: Typhimurium 14028 flgM mutant


title: RH_RRE2_14028flgM_14028wt_3h_plate_5D_3


title: RH_RRE2_14028cheZ_14028wt_3h_plate_5D_2

description:
Typhimurium 14028 cheZ mutant and wt transcripts after 3h growth on plate
User - TWang
Date_of_Scan = 2005/02/18 11:45:57


title: RH_RRE2_14028wt_14028cheYflgM_3h_plate_5D_4


title: RH_RRE2_14028flgM_14028wt_3h_plate_5D_6

description:
Typhimurium 14028flgM mutant and wt transcripts after 3h growth on plate
User - TWang
Date_of_Scan = 2004/12/15 09:00:58


title: RH_RRE2_14028cheZ_14028wt_3h_plate_5D_3


title: RH_RRE2_14028flgM_14028wt_3h_plate_5D_4


title: RH_RRE2_14028wt_14028cheYflgM_3h_plate_5D_3

description:
Typhimurium 14028 wt and cheYflgM mutant transcripts after 3h growth on plate
User - TWang
Date_of_Scan = 2004/11/19 12:49:30

source_name: Typhimurium 14028 cheYflgM double mutant


title: RH_RRE2_14028wt_14028cheYflgM_3h_plate_5D_1


title: RH_RRE2_14028cheZ_14028wt_3h_plate_5D_1


title: RH_RRE2_14028flgM_14028wt_3h_plate_5D_5


title: RH_RRE2_14028wt_14028cheYflgM_3h_plate_5D_2


title: V. cholerae in human vomitus vs. stool

status: Public on Aug 17 2005

city: Boston

first: Regina

last: LaRocque

state: MA

address: 55 Fruit Street

department: Division of Infectious Diseases

institute: Massachusetts General Hospital

description: Please refer to publication in Infection & Immunity.

organism: Vibrio cholerae

source_name: V. cholerae recovered from human stool

source_name: V. cholerae recovered from human vomitus


title: A4H3exp4

status: Public on Aug 20 2005

city: Berlin

first: Hans-Joachim

last: Mollenkopf

address: Charitéplatz 1

country: Germany

institute: Max-Planck-Institute for Infection Biology

description: 2nd re-hybridization (3rd hybridization) of 2 x  stripped A4H2exp1

data_processing: Agilent FE7.5 / Roseta Resolver V5.0

tag: 2nd re-hybridization (3rd hybridization on 2 x stripped array)

tag: exp4 (original sample from 1st hybridization)


title: A3H2exp1

description: 1st re-hybridization of exp1 on 1 x stripped A3H1exp3

data_processing: Agilent FE7.5 / Rosetta Resolver V5.0

tag: 1st re-hybridization (2nd hybridization on 1 x stripped array)


title: HKG94T

status: Public on Jul 25 2005

city: SG

first: Amit

last: Aggarwal

department: Cellular and Molecular Research

country: Singapore

institute: National Cancer Centre of Singapore

description: Biopsy; Gastric Cancer; Laurens: Intestinal

source_name: mRNA from Gastric Cancer

source_name: mRNA from pooled cell lines


title: A2H2exp1

description: 1st re-hybridization of exp1 on 1 x stripped A2H1exp2


title: A4H2exp1

description: 1st re-hybridization of exp1 on 1 x stripped A4H1exp4


title: A2H3exp2

description: 2nd re-hybridization (3rd hybridization) of 2 x stripped A2H2exp1

tag: exp2 (original sample from 1st hybridization)


title: A3H1exp3

description: hybridization on new microarray

data_processing: Agilent FE7.5 / Rosetta Resover V5.0

treatment_protocol:
exp3
liver CD3 negative/NK1.1 positive cells purified by magnetic cell sorting (MACS) followed by fluorescence activated cell sorting (FACS) with antibody and tetramer staining from naïve  gene deficient Rag-/- knock-out (KO) mice

tag: 1st hybridization

treatment_protocol:
exp3
liver CD3 negative/NK1.1 positive cells purified by magnetic cell sorting (MACS) followed by fluorescence activated cell sorting (FACS) with antibody and tetramer staining from Listeria monocytogenes infected gene deficient Rag-/- knock-out (KO) mice


title: A3H3exp3

description: 2nd re-hybridization (3rd hybridization) of 2 x stripped A3H2exp1

tag: exp3 (original sample from 1st hybridization)


title: HKG92T


title: HKG93T


title: HKG90T


title: HKG91T


title: Normal3

description: Normal Gastric tissue

source_name: mRNA from Normal Stomach; biopsy


title: A4H1exp4

description: hybridization on new microarray

treatment_protocol:
exp4
whole lung samples from an allergy model using IFN-gamma (IFN-g) transgenic mice on an IFN-g-/- KO background w/o induction

treatment_protocol:
exp4
whole lung samples from an allergy model using IFN-gamma (IFN-g) transgenic mice on an IFN-g-/- KO background with OVA induction


title: A1H1exp1

description: hybridization on new microarray

data_processing: Agilent FE7.5 /Rosetta Resolver V5.0

treatment_protocol:
exp1
whole lung samples of mice infected with wildtype Shigella flexneri

treatment_protocol:
exp1
whole lung samples of mice infected with recombinant Shigella flexneri


title: HKG83T


title: HKG87T

description: Biopsy; Gastric Cancer; Laurens: Diffused


title: HKG81T


title: HKG82T


title: HKG89T


title: Normal1

description: Normal Gastric tissue


title: NCC08

description: Gastric Cancer

source_name: mRNA from Gastric Cancer; biopsy


title: NCC22

description: Gastric Cancer


title: Normal2

description: Normal Gastric tissue


title: A2H1exp2

description: hybridization on new microarray

treatment_protocol:
exp2
whole lung samples from an allergy model w/o induction

treatment_protocol:
exp2
whole lung samples from an allergy model with OVA induction


title: NCC34

description: Gastric Cancer


title: HKG80T


title: NCC21

description: Gastric Cancer


title: NCC30

description: Gastric Cancer


title: HKG76T


title: HKG73T


title: NCC04

description: Gastric Cancer


title: HKG77T


title: NCC06

description: Gastric Cancer


title: HKG74T


title: HKG75T


title: NCC16

description: Gastric Cancer


title: ab214 M

description: Biopsy; Laurens:: Mixed

source_name: mRNA from Gastric tissue


title: NCC10

description: Gastric Cancer


title: HKG79T


title: NCC01

description: Gastric Cancer


title: ab217 D

description: Biopsy; Laurens::DIFFUSED


title: HKG69T


title: HKG72T


title: ab213 I

description: Biopsy; Laurens::INTESTINAL


title: NCC47

description: Gastric Cancer


title: HKG71T


title: ab215 D

description: Biopsy; Laurens::DIFFUSED


title: HKG68T


title: ab212 AS

description: Biopsy; Adenosquamous


title: ab211 D

description: Biopsy; Laurens::DIFFUSED


title: ab210 D

description: Biopsy; Laurens::DIFFUSED


title: HKG67T


title: ab206a SN

description: Biopsy; SN


title: ab209 I

description: Biopsy; Laurens::INTESTINAL


title: HKG66T


title: ab204 CG

description: Biopsy; Chronic Gastritis


title: RH_RRE2_14028flgM_14028wt_3h_plate_5D_2


title: ab207 M

description: Biopsy; Laurens:: Mixed


title: HKG65T


title: ab202 CG

description: Biopsy; Chronic Gastritis


title: HKG61T


title: HKG64T


title: HKG60T


title: HKG58T


title: HKG62T


title: ab199 IM

description: Biopsy; Intestinal Metaplasia


title: ab201 CG

description: Biopsy; Chronic Gastritis


title: HKG59T


title: HKG57T


title: HKG56T


title: HKG55T


title: ab198 M

description: Biopsy; Laurens:: Mixed


title: ab196 CG

description: Biopsy; Chronic Gastritis


title: ab192 CG

description: Biopsy; Chronic Gastritis


title: ab193 D

description: Biopsy; Laurens::DIFFUSED


title: HKG70T


title: HKG54T


title: ab195 D

description: Biopsy; Laurens::DIFFUSED


title: HKG53T

description: Biopsy; Gastric Cancer; Laurens: Mixed


title: ab191 I

description: Biopsy; Laurens::INTESTINAL


title: ab189 I

description: Biopsy; Laurens::INTESTINAL


title: HKG84T


title: ab184 D

description: Biopsy; Laurens::DIFFUSED


title: ab190 CG

description: Biopsy; Chronic Gastritis


title: ab183 I

description: Biopsy; Laurens::INTESTINAL


title: ab180 N

description: Biopsy; Normal Stomach


title: HKG49T

description: Biopsy; Gastric Cancer; Laurens: Mixed


title: HKG45T


title: HKG47T


title: ab187 CG

description: Biopsy; Chronic Gastritis


title: ab188 D

description: Biopsy; Laurens::DIFFUSED


title: HKG51T

description: Biopsy; Gastric Cancer; Laurens: Mixed


title: HKG44T


title: HKG48T


title: ab182 I

description: Biopsy; Laurens::INTESTINAL


title: HKG46T


title: HKG52T


title: HKG42T


title: ab174 CG

description: Biopsy; Chronic Gastritis


title: HKG43T


title: HKG41T


title: HKG78T

description: Biopsy; Gastric Cancer; Laurens: Mixed


title: ab177 IM

description: Biopsy; Intestinal Metaplasia


title: ab173 D

description: Biopsy; Laurens::DIFFUSED


title: HKG38T


title: ab181a I

description: Biopsy; Laurens::INTESTINAL


title: HKG40T


title: ab172 I

description: Biopsy; Laurens::INTESTINAL


title: ab170 I

description: Biopsy; Laurens::INTESTINAL


title: ab166 D

description: Biopsy; Laurens::DIFFUSED


title: ab161 N

description: Biopsy; Normal Stomach


title: ab158 M

description: Biopsy; Laurens:: Mixed


title: ab164 IM

description: Biopsy; Intestinal Metaplasia


title: ab165 CG

description: Biopsy; Chronic Gastritis


title: ab156 IM

description: Biopsy; Intestinal Metaplasia


title: HKG31T


title: NCC11

description: Gastric cancer; biopsy


title: NCC44

description: Gastric cancer; biopsy


title: HKG37T


title: HKG33T

description: Biopsy; Gastric Cancer; Laurens: Mixed


title: NCC40

description: Gastric cancer; biopsy


title: HKG35T


title: ab159 CG

description: Biopsy; Chronic Gastritis


title: ab151 D

description: Biopsy; Laurens::DIFFUSED


title: ab154 I

description: Biopsy; Laurens::INTESTINAL


title: HKG34T


title: NCC56

description: Gastric cancer; biopsy


title: HKG32T


title: NCC05

description: Gastric cancer; biopsy


title: HKG36T


title: ab149 N

description: Biopsy; Normal Stomach


title: ab171 IM

description: Biopsy; Intestinal Metaplasia


title: HKG30T


title: HKG39T


title: HKG29T


title: NCC27

description: Gastric cancer; biopsy


title: ab168 I

description: Biopsy; Laurens::INTESTINAL


title: ab146 D

description: Biopsy; Laurens::DIFFUSED


title: ab147 N

description: Biopsy; Normal Stomach


title: ab143 I

description: Biopsy; Laurens::INTESTINAL


title: ab148 D

description: Biopsy; Laurens::DIFFUSED


title: NCC45

description: Gastric cancer; biopsy


title: ab144 IM

description: Biopsy; Intestinal Metaplasia


title: HKG27T


title: HKG63T


title: NCC48

description: Gastric cancer; biopsy


title: ab133 D

description: Biopsy; Laurens::DIFFUSED


title: ab139 N

description: Biopsy; Normal Stomach


title: ab138 I

description: Biopsy; Laurens::INTESTINAL


title: HKG25T


title: ab134 N

description: Biopsy; Normal Stomach


title: ab169 CG

description: Biopsy; Chronic Gastritis


title: NCC12

description: Gastric cancer; biopsy


title: NCC60

description: Gastric cancer; biopsy


title: ab131 D

description: Biopsy; Laurens::DIFFUSED


title: HKG26T


title: ab132 CG

description: Biopsy; Chronic Gastritis


title: HKG28T


title: ab128 M

description: Biopsy; Laurens:: Mixed


title: HKG23T


title: ab123 I

description: Biopsy; Laurens::INTESTINAL


title: NCC38

description: Gastric cancer; biopsy


title: ab129 IM

description: Biopsy; Intestinal Metaplasia


title: NCC29

description: Gastric cancer; biopsy


title: NCC54

description: Gastric cancer; biopsy


title: ab124 CG

description: Biopsy; Chronic Gastritis


title: HKG24T

description: Biopsy; Gastric Cancer; Laurens: Indeterminate


title: NCC03

description: Gastric cancer; biopsy


title: HKG22T

description: Biopsy; Gastric Cancer; Laurens: Mixed


title: NCC31

description: Gastric cancer; biopsy


title: ab121 D

description: Biopsy; Laurens::DIFFUSED


title: HKG21T


title: ab118 D

description: Biopsy; Laurens::DIFFUSED


title: HKG20T


title: ab117 N

description: Biopsy; Normal Stomach


title: ab119 IM

description: Biopsy; Intestinal Metaplasia


title: ab108 I

description: Biopsy; Laurens::INTESTINAL


title: ab109 CG

description: Biopsy; Chronic Gastritis


title: ab116 D

description: Biopsy; Laurens::DIFFUSED


title: ab110 D

description: Biopsy; Laurens::DIFFUSED


title: ab113 D

description: Biopsy; Laurens::DIFFUSED


title: ab135 CG

description: Biopsy; Chronic Gastritis


title: ab099 CG

description: Biopsy; Chronic Gastritis


title: ab111 CG

description: Biopsy; Chronic Gastritis


title: ab106 IM

description: Biopsy; Intestinal Metaplasia


title: ab114 CG

description: Biopsy; Chronic Gastritis


title: ab103 D

description: Biopsy; Laurens::DIFFUSED


title: ab105 D

description: Biopsy; Laurens::DIFFUSED


title: ab104 IM

description: Biopsy; Intestinal Metaplasia


title: NCC02

description: Gastric cancer; biopsy


title: NCC46

description: Gastric cancer; biopsy


title: HKG15T

description: Biopsy; Gastric Cancer; Laurens: Mixed


title: NCC36

description: Gastric cancer; biopsy


title: NCC52

description: Gastric cancer; biopsy


title: HKG19T


title: HKG16T


title: HKG13T


title: NCC24

description: Gastric cancer; biopsy


title: ab094 CG

description: Biopsy; Chronic Gastritis


title: NCC37

description: Gastric cancer; biopsy


title: HKG17T


title: NCC14

description: Gastric cancer; biopsy


title: HKG18T


title: HKG14T


title: NCC39

description: Gastric cancer; biopsy


title: ab084 CG

description: Biopsy; Chronic Gastritis


title: HKG12T


title: ab086 CG

description: Biopsy; Chronic Gastritis


title: ab078 D

description: Biopsy; Laurens::DIFFUSED


title: ab093 D

description: Biopsy; Laurens::DIFFUSED


title: NCC25

description: Gastric cancer; biopsy


title: HKG11T


title: ab074 IM

description: Biopsy; Intestinal Metaplasia


title: NCC28

description: Gastric cancer; biopsy


title: ab079 CG

description: Biopsy; Chronic Gastritis


title: ab076 D

description: Biopsy; Laurens::DIFFUSED


title: ab083 I

description: Biopsy; Laurens::INTESTINAL


title: ab077 IM

description: Biopsy; Intestinal Metaplasia


title: NCC51

description: Gastric cancer; biopsy


title: HKG10T


title: NCC09

description: Gastric cancer; biopsy


title: HKG8T


title: ab068 I

description: Biopsy; Laurens::INTESTINAL


title: ab073 D

description: Biopsy; Laurens::DIFFUSED


title: ab069 IM

description: Biopsy; Intestinal Metaplasia


title: ab071 D

description: Biopsy; Laurens::DIFFUSED


title: NCC23

description: Gastric cancer; biopsy


title: NCC42

description: Gastric cancer; biopsy


title: NCC58

description: Gastric cancer; biopsy


title: HKG9T


title: ab072 IM

description: Biopsy; Intestinal Metaplasia


title: HKG6T


title: HKG5T


title: HKG7T

description: Biopsy; Gastric Cancer; Laurens: Mixed


title: ab064 N

description: Biopsy; Normal Stomach


title: NCC55

description: Gastric cancer; biopsy


title: ab066 D

description: Biopsy; Laurens::DIFFUSED


title: NCC07

description: Gastric cancer; biopsy


title: ab060 IM

description: Biopsy; Intestinal Metaplasia


title: ab061a IM

description: Biopsy; Intestinal Metaplasia


title: HKG4T


title: HKG2T


title: HKG3T


title: ab057 IM

description: Biopsy; Intestinal Metaplasia


title: ab063 D

description: Biopsy; Laurens::DIFFUSED


title: ab059 I

description: Biopsy; Laurens::INTESTINAL


title: ab050 IM

description: Biopsy; Intestinal Metaplasia


title: ab056 D

description: Biopsy; Laurens::DIFFUSED


title: ab054 D

description: Biopsy; Laurens::DIFFUSED


title: ab049 I

description: Biopsy; Laurens::INTESTINAL


title: NCC13

description: Gastric cancer; biopsy


title: ab055 CG

description: Biopsy; Chronic Gastritis


title: NCC59

description: Gastric cancer; biopsy


title: NCC57

description: Gastric cancer; biopsy


title: NCC35

description: Gastric cancer; biopsy


title: ab045 N

description: Biopsy; Normal Stomach


title: ab047 IM

description: Biopsy; Intestinal Metaplasia


title: ab044 D

description: Biopsy; Laurens::DIFFUSED


title: NCC18

description: Gastric cancer; biopsy


title: HKG1T


title: ab034 M

description: Biopsy; Laurens:: Mixed


title: ab040 N

description: Biopsy; Normal Stomach


title: NCC15

description: Gastric cancer; biopsy


title: NCC19

description: Gastric cancer; biopsy


title: ab035 IM

description: Biopsy; Intestinal Metaplasia


title: ab021 I

description: Biopsy; Laurens::INTESTINAL


title: ab039 D

description: Biopsy; Laurens::DIFFUSED


title: ab016 I

description: Biopsy; Laurens::INTESTINAL


title: ab020 IM

description: Biopsy; Intestinal Metaplasia


title: NCC26

description: Gastric cancer; biopsy


title: ab015 CG

description: Biopsy; Chronic Gastritis


title: ab013 D

description: Biopsy; Laurens::DIFFUSED


title: ab010 IM

description: Biopsy; Intestinal Metaplasia


title: NCC53

description: Gastric cancer; biopsy


title: ab004 CG

description: Biopsy; Chronic Gastritis


title: NCC50

description: Gastric cancer; biopsy


title: ab009 M

description: Biopsy; Laurens:: Mixed