title: Strain M14, Rich media, Replicate 1

description:
Strain M14 during exponential growth in Rich media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Rich media

source_name: Strain M14, Rich media, Replicate 1


title: Strain M22, Copper sulfate media, Replicate 3

status: Public on Mar 01 2004

type: RNA

city: Saint Louis

first: Justin

last: Fay

state: MO

address: 4566 Scott Ave, Box 8232

department: Genetics

country: USA

institute: Washington University

description:
Strain M22 during exponential growth in Copper sulfate media, Replicate 3.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media

molecule: total RNA

organism: Saccharomyces cerevisiae

source_name: Copper sulfate reference, Copper sulfate media, Replicate 3


title: Strain M13, Copper sulfate media, Replicate 3

description:
Strain M13 during exponential growth in Copper sulfate media, Replicate 3.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain YPS163, Rich media, Replicate 1

description:
Strain YPS163 during exponential growth in Rich media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Rich media

source_name: Rich media reference, Rich media, Replicate 1

source_name: Strain YPS163, Rich media, Replicate 1


title: Strain M8, Copper sulfate media, Replicate 3

description:
Strain M8 during exponential growth in Copper sulfate media, Replicate 3.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M5, Copper sulfate media, Replicate 3

description:
Strain M5 during exponential growth in Copper sulfate media, Replicate 3.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M34, Copper sulfate media, Replicate 2

description:
Strain M34 during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media

source_name: Copper sulfate reference, Copper sulfate media, Replicate 2


title: CDV+TPA 24h /Ulatent_2

status: Public on Dec 01 2004

city: Bethesda

first: Michael

last: Lu

state: MD

address: 10 Center Drive, Blg. 10, Rm 10S255

department: HIV and AIDS Malignancy Branch

institute: National Cancer Institute

description:
mAdb experiment ID: 40820
TPA induced BCBL1 with CDV treatment and harvested after 24 hrs versus untreated Latent BCBL-1 cells
Organism synonym: KSHV
Array Print: hhv8v2p4-20
Cell line origin: lymphocytic
Cell Line: BCBL-1
CDV Treatment: 100 microMolar
TPA Induction: 20 ng/ml
Induction Time (hrs): 24

organism: Human gammaherpesvirus 8

source_name: BCBL-1 Untreated Latent

source_name: BCBL-1 CDV-treated TPA induced 24hr


title: Strain M32, Copper sulfate media, Replicate 3

description:
Strain M32 during exponential growth in Copper sulfate media, Replicate 3.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M8, Copper sulfate media, Replicate 2

description:
Strain M8 during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain YPS163, Copper sulfate media, Replicate 2

description:
Strain YPS163 during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M32, Copper sulfate media, Replicate 2

description:
Strain M32 during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M14, Copper sulfate media, Replicate 2

description:
Strain M14 during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M22, Copper sulfate media, Replicate 2

description:
Strain M22 during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M5, Copper sulfate media, Replicate 2

description:
Strain M5 during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain S288C, Copper sulfate media, Replicate 2

description:
Strain S288C during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M13, Copper sulfate media, Replicate 2

description:
Strain M13 during exponential growth in Copper sulfate media, Replicate 2.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M22, Copper sulfate media, Replicate 1

description:
Strain M22 during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media

source_name: Copper sulfate reference, Copper sulfate media, Replicate 1


title: Strain M8, Copper sulfate media, Replicate 1

description:
Strain M8 during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M13, Copper sulfate media, Replicate 1

description:
Strain M13 during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M32, Copper sulfate media, Replicate 1

description:
Strain M32 during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain S288C, Copper sulfate media, Replicate 1

description:
Strain S288C during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M5, Copper sulfate media, Replicate 1

description:
Strain M5 during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M14, Copper sulfate media, Replicate 1

description:
Strain M14 during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain YPS163, Copper sulfate media, Replicate 1

description:
Strain YPS163 during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: Strain M34, Copper sulfate media, Replicate 1

description:
Strain M34 during exponential growth in Copper sulfate media, Replicate 1.
The reference sample is the combined RNA from all 9 strains.
RNA was extrated using hot phenol-chloroform, reverse transcribed using amino-allyle dUTP and labelled with either Cy3 or Cy5 flourescent dye.
Images were scanned and spot intensities extracted using a GenePix 4000A scanner and GenePix 4.0 software. Bad spots were flagged based on the image.
Sample_keywork: Copper sulfate media


title: BC-920079

status: Public on Feb 21 2006

city: Rahway

first: Olivia

last: Fong

state: NJ

department: Molecular Profiling

institute: Merck & Co.

description:
Chronic Myelogenous Leukemia
type: cd34
blast count: NaN
Center code: 1
Note: Center code == 5 not used for disease phase analysis
imatinib analysis: 0

organism: Homo sapiens

source_name: CP Pool