title: ABI-MRP1-5

description: The adult mouse retina samples were obtained from a pool of C57/B6 mice (n = 350), which were purchased from Charles River Laboratories (Charles River Laboratories, Inc., Willmington, MA). All samples were placed in TRIzol reagent (Invitrogen, Carlsbad, CA) and stored at -80ºC before RNA extraction. Total RNA was extracted with TRIzol reagent according to the manufacturer's instructions. For a quality control measure of the samples, total RNA was ran through a 1% agarose gel and using the 2100 Agilent BioAnalyzer System (Agilent Technologies, Palo Alto, CA) to check for possible contamination and degradation.

hyb_protocol: Microarray hybridization (using twenty micrograms of fragmented, DIG-labeled cRNA) and processing were performed according to Applied Biosystems protocols.

scan_protocol: Chemiluminescence detection, imaging, auto gridding, and image analysis was done according to Applied Biosystems protocols and the 1700 Chemiluminescent Microarray Analyzer Software v. 1.0.3.

label: DIG-UTP

source_name: Mouse Retina

label_protocol: 1 ug of total RNA was used to transcribe DIG-labeled cRNA using Applied Biosystems Chemiluminescent RT-IVT Kit V2.0.

tag: Adult Mouse Retina


title: BA82_40_U3_75_export

status: Public on Jun 01 2006

type: RNA

city: Charleston

first: MarineGenomics

last: Project

state: SC

address: 331 Fort Johnson Rd

country: USA

hyb_protocol: 33% formamide, 2.6X SSPE, 2.4% SDS, 1.7X Denhardts

data_processing: Ch1 Intensities read directly from the Microarray scanner.

molecule: total RNA

organism: Penaeus vannamei

treatment_protocol: untreated control

tag: hepatopancreas, biosecure recirculating artificial seawater, adult, hepatopancreas, KONA


title: ABI-MRP1-4

city: Boston

first: Winston

middle: Patrick

last: Kuo

state: MA

address: 188 Longwood Avenue

department: Genetics

institute: Harvard Medical School

data_processing: Signal intensities across microarrays were normalized using the quantile normalization (www.bioconductor.org).

organism: Mus musculus


title: diff_tiss_hemo_1_67_PMT

tag: hemolymph, biosecure recirculating artificial seawater, adult, KONA


title: mgma397_diff_tiss_gill_2_67_PMT

tag: biosecure recirculating artificial seawater, adult, gills, KONA


title: ABI-MRP1-1


title: ABI-MRP1-3


title: diff_tiss_hemo_2_67_PMT

tag: biosecure recirculating artificial seawater, adult, hemolymph, KONA


title: AFFY_MC_S2_3

description: MC technical replicate 3 (site 2)

hyb_protocol: Standard Affymetrix procedures

scan_protocol: Standard Affymetrix procedures

label: ENZO biotin labeled

source_name: Post-natal day 1 mouse cortex

label_protocol: Approximately 10 micrograms of total RNA was processed to produce biotinylated cRNA targets.

tag: The mouse cortex samples were obtained from P1 C57/B6 mice (n = 19), which were purchased from Charles River Laboratories (Charles River Laboratories, Inc., Willmington, MA).The mouse cortex was used as a reference sample. Universal mRNA reference was still being developed when the study started, so it was not utilized. All samples were placed in TRIzol reagent (Invitrogen, Carlsbad, CA) and stored at -80ºC before RNA extraction. Total RNA was extracted with TRIzol reagent according to the manufacturer's instructions. For a quality control measure of the samples, total RNA was ran through a 1% agarose gel and using the 2100 Agilent BioAnalyzer System (Agilent Technologies, Palo Alto, CA) to check for possible contamination and degradation.


title: Mergen-MC-S2-4

description: MC technical replicate 4 (site 2)

hyb_protocol: These probes were hybridized to the arrays overnight at 30°C with continuous agitation. The arrays were then washed, and hybridized probes were detected using a streptavidin/cyanine-3 fluorescent dye-conjugated antibody.

scan_protocol: Chips were imaged using a ScanArray scanner (PerkinElmer, Boston, MA).

label_protocol: The ExpressChip MO3 DNA Microarray System (Mergen Ltd., San Leandro, CA) was used for this study. The assay was carried out according to the manufacturer's instructions. In brief, DNase-treated total RNA (20 µg) was reverse-transcribed using an oligo[(dT)24 T7 promoter]65 primer (consisting of the nucleotide binding sequence for the T7 RNA polymerase followed by 24 thymidine nucleotides) followed by second strand synthesis. ). The double-stranded cDNA was cleaned using the Qiaquick purification kit (Qiagen) all of which was used as a template for In Vitro Transcription (IVT) utilizing Ambion's T7 MEGA script reagents and Biotin-11-UTP (PerkinElmer/NEN).


title: AFFY_MC_S2_1

description: MC technical replicate 1 (site 2)


title: ABI-MRP1-2


title: Mergen-MC-S2-3

description: MC technical replicate 3 (site 2)


title: ABI-MC-2

description: The mouse cortex samples were obtained from P1 C57/B6 mice (n = 19), which were purchased from Charles River Laboratories (Charles River Laboratories, Inc., Willmington, MA).The mouse cortex was used as a reference sample. Universal mRNA reference was still being developed when the study started, so it was not utilized. All samples were placed in TRIzol reagent (Invitrogen, Carlsbad, CA) and stored at -80ºC before RNA extraction. Total RNA was extracted with TRIzol reagent according to the manufacturer's instructions. For a quality control measure of the samples, total RNA was ran through a 1% agarose gel and using the 2100 Agilent BioAnalyzer System (Agilent Technologies, Palo Alto, CA) to check for possible contamination and degradation.

source_name: Mouse Cortex

tag: Post-natal Day 1 mouse cortex


title: AFFY_MRP1_S2_3

description: MRP1 technical replicate 3 (site 2)

source_name: Adult mouse retina

tag: The adult mouse retina samples were obtained from a pool of C57/B6 mice (n = 350), which were purchased from Charles River Laboratories (Charles River Laboratories, Inc., Willmington, MA). All samples were placed in TRIzol reagent (Invitrogen, Carlsbad, CA) and stored at -80ºC before RNA extraction. Total RNA was extracted with TRIzol reagent according to the manufacturer's instructions. For a quality control measure of the samples, total RNA was ran through a 1% agarose gel and using the 2100 Agilent BioAnalyzer System (Agilent Technologies, Palo Alto, CA) to check for possible contamination and degradation.


title: AFFY_MC_S2_2

description: MC technical replicate 2 (site 2)


title: AFFY_MRP1_S2_1

description: MRP1 technical replicate 1 (site 2)


title: Mergen-MC-S2-2

description: MC technical replicate 2 (site 2)


title: AFFY_MRP1_S2_2

description: MRP1 technical replicate 2 (site 2)


title: Mergen-MC-S2-1

description: MC technical replicate 1 (site 2)


title: diff_tiss_HP_1_67_PMT

tag: hepatopancreas, biosecure recirculating artificial seawater, adult, KONA


title: Mergen-MC-S2-5

description: MC technical replicate 5 (site 2)


title: ABI-MC-4


title: ABI-MC-1


title: diff_tiss_HP_3_67_PMT

tag: biosecure recirculating artificial seawater, adult, hepatopancreas, KONA


title: mgma386_diff_tiss_gill_1_67_PMT

tag: gills, biosecure recirculating artificial seawater, adult, KONA


title: Mergen-MRP1-S2-5

description: MRP1 technical replicate 5 (site 2)


title: ABI-MC-3


title: mgma396_diff_tiss_gill_1_67_PMT


title: AFFY_MC_5


title: diff_tiss_HP_2_67_PMT


title: ABI-MC-5

source_name: Mouse Cortec


title: AFFY_MC_4

tag: Post-natal day 1 mouse cortex


title: AFFY_MC_2


title: Mergen-MC-5

description: MC technical replicate 5


title: Mergen-MRP1-S2-1

description: MRP1 technical replicate 1 (site 2)


title: AFFY_MC_3


title: Mergen-MC-4

description: MC technical replicate 4


title: AFFY_MRP1_5


title: Mergen-MC-2

description: MC technical replicate 2


title: Mergen-MRP1-S2-2

description: MRP1 technical replicate 2 (site 2)


title: Mergen-MRP1-5

description: MRP1 technical replicate 5


title: Mergen-MC-3

description: MC technical replicate 3


title: Mergen-MRP1-S2-3

description: MRP1 technical replicate 3 (site 2)


title: Mergen-MC-1

description: MC technical replicate 1


title: AFFY_MRP1_3

tag: Adult mouse retina


title: Mergen-MRP1-S2-4

description: MRP1 technical replicate 4 (site 2)


title: AFFY_MRP1_2


title: AFFY_MC_1


title: Mergen-MRP1-4

description: MRP1 technical replicate 4


title: Mergen-MRP1-3

description: MRP1 technical replicate 3


title: Mergen-MRP1-1

description: MRP1 technical replicate 1


title: AFFY_MRP1_4


title: Mergen-MRP1-2

description: MRP1 technical replicate 2


title: AFFY_MRP1_1

source_name: Mouse retina


title: B X99A50

status: Public on May 31 2006

city: Singapore

first: Lance

middle: David

last: Miller

address: 60 Bioplois Street, #02-01 Genome

department: Microarray and Expression Genomics

country: Singapore

institute: Genome Institute of Singapore

description: Series of 249 tumours

hyb_protocol: Standard Affymetrix procedure

scan_protocol: Standard Affymetrix procedure

data_processing: Affymetrix Microarray Suite Version 5.0

label: biotin

organism: Homo sapiens

source_name: Breast Tumor

label_protocol: Approximately 10ug of total RNA was processed to produce biotynylated cRNA targets

extract_protocol: Qiagen RNeasy Mini Kit

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: ER status

value: ER+

tag: Lymph node status

value: LN-

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: B X9B52

description: Series of 249 tumours


title: B X90A63

description: Series of 249 tumours


title: B X96A21

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):

value: LN+


title: B X94A16

description: Series of 249 tumours

tag: INDEX (ID)


title: BA82_40_U6_75_export

tag: hepatopancreas, biosecure recirculating artificial seawater, adult, hepatopancreas, KONA


title: B X8B87

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X88A67

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)


title: B X85A03

description: Series of 249 tumours

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X74A63

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X73A01

description: Series of 249 tumours

tag: ER status


title: B X7B96

description: Series of 249 tumours

tag: Lymph node status


title: B X66A84

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X72A92

description: Series of 249 tumours

tag: age at diagnosis


title: B X84A44

description: Series of 249 tumours

tag: tumor size (mm)


title: B X82A83

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X87A79

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X76A44

description: Series of 249 tumours

tag: INDEX (ID)

tag: No systemic therapy (1=included in survival analysis):


title: B X83A37

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X69A93

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X6B85

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X62A02

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

value: ER-


title: B X67A43

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X77A50

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X63A62

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X86A40

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X65A68

description: Series of 249 tumours

tag: ER status


title: B X5B97

description: Series of 249 tumours

tag: Lymph node status


title: B X64A59

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X60A05

description: Series of 249 tumours

tag: age at diagnosis


title: B X75A01

description: Series of 249 tumours

tag: tumor size (mm)


title: B X61A53

description: Series of 249 tumours


title: B X70A79

description: Series of 249 tumours

value: LN?


title: B X58A50

description: Series of 249 tumours


title: B X89A64

description: Series of 249 tumours


title: B X56A94

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X79A35

description: Series of 249 tumours


title: B X53A06

description: Series of 249 tumours


title: B X44A53

description: Series of 249 tumours


title: B X42C57

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)

value: ER?


title: B X46A25

description: Series of 249 tumours

tag: INDEX (ID)


title: B X47A87

description: Series of 249 tumours


title: B X54A09

description: Series of 249 tumours


title: B X50A91

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X55A79

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X48A46

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X37C06

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X51A98

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X314B55

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X43C47

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X40C57

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X39C24

description: Series of 249 tumours


title: B X34C80

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X313A87

description: Series of 249 tumours

tag: ER status


title: B X36C17

description: Series of 249 tumours

tag: Lymph node status


title: B X41C65

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X33C30

description: Series of 249 tumours

tag: age at diagnosis


title: B X308C93

description: Series of 249 tumours

tag: tumor size (mm)


title: B X49A07

description: Series of 249 tumours


title: B X309C49

description: Series of 249 tumours


title: B X316C65

description: Series of 249 tumours


title: B X35C29

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X307C50

description: Series of 249 tumours


title: B X52A90

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X311A27

description: Series of 249 tumours

tag: INDEX (ID)


title: B X304C89

description: Series of 249 tumours


title: B X45A96

description: Series of 249 tumours


title: B X301C66

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X291C17

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X303C36

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X294C04

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X298C47

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X296C95

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X288C57

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X274C81

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X28C76

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X297C26

description: Series of 249 tumours

tag: ER status


title: B X280C43

description: Series of 249 tumours

tag: Lymph node status


title: B X272C88

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X282C51

description: Series of 249 tumours

tag: age at diagnosis


title: B X270C93

description: Series of 249 tumours

tag: tumor size (mm)


title: B X292C66

description: Series of 249 tumours


title: B X275C70

description: Series of 249 tumours


title: B X279C61

description: Series of 249 tumours


title: B X289C75

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X286C91

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X271C71

description: Series of 249 tumours

tag: INDEX (ID)


title: B X290C91

description: Series of 249 tumours


title: B X284C63

description: Series of 249 tumours


title: B X287C67

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X278C80

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X27C82

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X26C23

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X269C68

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X277C64

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X268C87

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X266C51

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X267C04

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X258C21

description: Series of 249 tumours

tag: ER status


title: B X260C91

description: Series of 249 tumours

tag: Lymph node status


title: B X265C40

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X263C82

description: Series of 249 tumours

tag: age at diagnosis


title: B X248C91

description: Series of 249 tumours

tag: tumor size (mm)


title: B X24C30

description: Series of 249 tumours


title: B X253C20

description: Series of 249 tumours


title: B X254C80

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X249C42

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X255C06

description: Series of 249 tumours

tag: INDEX (ID)


title: B X256C45

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X242C21

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X259C74

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X244C89

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X251C14

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X257C87

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X252C64

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X243C70

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X250C78

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X240C54

description: Series of 249 tumours

tag: ER status


title: B X262C85

description: Series of 249 tumours

tag: Lymph node status


title: B X247C76

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X245C22

description: Series of 249 tumours

tag: age at diagnosis


title: B X241C01

description: Series of 249 tumours

tag: tumor size (mm)


title: B X246C75

description: Series of 249 tumours


title: B X23C52

description: Series of 249 tumours


title: B X238C87

description: Series of 249 tumours


title: B X237C56

description: Series of 249 tumours


title: B X261C94

description: Series of 249 tumours


title: B X232C58

description: Series of 249 tumours


title: B X234C15

description: Series of 249 tumours


title: B X235C20

description: Series of 249 tumours


title: B X225C52

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X22C62

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X229C44

description: Series of 249 tumours

tag: INDEX (ID)


title: B X227C50

description: Series of 249 tumours


title: B X230C47

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X21C28

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X220C70

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X212C21

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X218C29

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X217C79

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X224C93

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X221C14

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X209C10

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X210C72

description: Series of 249 tumours

tag: ER status


title: B X216C61

description: Series of 249 tumours

tag: Lymph node status


title: B X226C06

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X213C36

description: Series of 249 tumours

tag: age at diagnosis


title: B X233C91

description: Series of 249 tumours

tag: tumor size (mm)


title: B X208C06

description: Series of 249 tumours


title: B X223C51

description: Series of 249 tumours


title: B X211C88

description: Series of 249 tumours


title: B X236C55

description: Series of 249 tumours


title: B X207C08

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X206C05

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X222C26

description: Series of 249 tumours

tag: INDEX (ID)


title: B X205B99

description: Series of 249 tumours


title: B X202B44

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X201B68

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X204B85

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X195B75

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X18C56

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X193B72

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X185B44

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X186B22

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X191B79

description: Series of 249 tumours


title: B X192B69

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X187B36

description: Series of 249 tumours

tag: ER status


title: B X19C33

description: Series of 249 tumours

tag: Lymph node status


title: B X194B60

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X181B70

description: Series of 249 tumours

tag: age at diagnosis


title: B X183B75

description: Series of 249 tumours

tag: tumor size (mm)


title: B X231C80

description: Series of 249 tumours


title: B X196B81

description: Series of 249 tumours


title: B X189B83

description: Series of 249 tumours


title: B X197B95

description: Series of 249 tumours


title: B X184B38

description: Series of 249 tumours


title: B X188B13

description: Series of 249 tumours


title: B X200B47

description: Series of 249 tumours


title: B X17C40

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X182B43

description: Series of 249 tumours


title: B X198B90

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X176B74

description: Series of 249 tumours

tag: INDEX (ID)


title: B X177B67

description: Series of 249 tumours


title: B X175B72

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X172B19

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X170B15

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X16C97

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X178B74

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X163B27

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X164B81

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X171B77

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X166B79

description: Series of 249 tumours


title: B X173B43

description: Series of 249 tumours


title: B X161B31

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X168B51

description: Series of 249 tumours

tag: ER status


title: B X159B47

description: Series of 249 tumours

tag: Lymph node status


title: B X165B72

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X156B01

description: Series of 249 tumours

tag: age at diagnosis


title: B X162B98

description: Series of 249 tumours

tag: tumor size (mm)


title: B X174B41

description: Series of 249 tumours


title: B X199B55

description: Series of 249 tumours


title: B X160B16

description: Series of 249 tumours


title: B X15C94

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X169B79

description: Series of 249 tumours


title: B X158B84

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X179B28

description: Series of 249 tumours

tag: INDEX (ID)


title: B X155B52

description: Series of 249 tumours


title: B X203B49

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X146B39

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X150B81

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X143B81

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X127B00

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X130B92

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X122B81

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X140B91

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X154B42

description: Series of 249 tumours


title: B X180B38

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X147B19

description: Series of 249 tumours

tag: ER status


title: B X138B34

description: Series of 249 tumours

tag: Lymph node status


title: B X152B99

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: B X13B79

description: Series of 249 tumours

tag: age at diagnosis


title: B X120B73

description: Series of 249 tumours

tag: tumor size (mm)


title: B X137B88

description: Series of 249 tumours


title: B X145B10

description: Series of 249 tumours


title: B X151B84

description: Series of 249 tumours


title: B X134B33

description: Series of 249 tumours


title: B X124B25

description: Series of 249 tumours


title: B X144B49

description: Series of 249 tumours


title: B X136B04

description: Series of 249 tumours


title: B X128B48

description: Series of 249 tumours


title: B X14B98

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: B X153B09

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: B X135B40

description: Series of 249 tumours

tag: INDEX (ID)


title: B X11B47

description: Series of 249 tumours


title: B X131B79

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):


title: B X139B03

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: B X142B05

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)


title: B X114B68

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)


title: B X111B51

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)


title: B X110B34

description: Series of 249 tumours

tag: DFS TIME (yrs)


title: B X106B55

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer


title: B X105B13

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)


title: B X113B11

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: B X100B08

description: Series of 249 tumours

tag: ER status


title: B X112B55

description: Series of 249 tumours

tag: Lymph node status


title: X036AR (HG-U133B)

city: Stockholm

first: Alexander

last: Ploner

department: Medical Epidemiology and Biostatistics

country: Sweden

institute: Karolinska Institutet

description: Series of 159 tumors

source_name: Breast tumor

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

value: Luminal B

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: B X10B88

description: Series of 249 tumours

tag: INDEX (ID)

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X072TE (HG-U133B)

description: Series of 159 tumors

value: No Subtype


title: X132VI (HG-U133B)

description: Series of 159 tumors

value: Normal Like


title: X184LO (HG-U133B)

description: Series of 159 tumors

value: Luminal A


title: X059HO (HG-U133B)

description: Series of 159 tumors


title: X341UL (HG-U133B)

description: Series of 159 tumors

value: Basal


title: X196SA (HG-U133B)

description: Series of 159 tumors


title: X138BR (HG-U133B)

description: Series of 159 tumors


title: B X102B06

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: No systemic therapy (1=included in survival analysis):


title: X015HE (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue


title: X048SA (HG-U133B)

description: Series of 159 tumors

tag: RELAPSE


title: B X103B41

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: ER status

tag: Lymph node status


title: B X101B88

description: Series of 249 tumours

tag: INDEX (ID)

tag: No systemic therapy (1=included in survival analysis)


title: X095NI (HG-U133B)

description: Series of 159 tumors

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X282WI (HG-U133B)

description: Series of 159 tumors


title: X304VE (HG-U133B)

description: Series of 159 tumors


title: X327EN (HG-U133B)

description: Series of 159 tumors


title: X069EK (HG-U133B)

description: Series of 159 tumors


title: B X104B91

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X014ER (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE


title: X258VE (HG-U133B)

description: Series of 159 tumors


title: X244SO (HG-U133B)

description: Series of 159 tumors


title: X154AN (HG-U133B)

description: Series of 159 tumors


title: X146HO (HG-U133B)

description: Series of 159 tumors


title: X283AN (HG-U133B)

description: Series of 159 tumors


title: X085RY (HG-U133B)

description: Series of 159 tumors


title: X285FL (HG-U133B)

description: Series of 159 tumors


title: X150JO (HG-U133B)

description: Series of 159 tumors


title: X202NI (HG-U133B)

description: Series of 159 tumors


title: X325OS (HG-U133B)

description: Series of 159 tumors


title: X379BA (HG-U133B)

description: Series of 159 tumors


title: X075DA (HG-U133B)

description: Series of 159 tumors


title: X128SA (HG-U133B)

description: Series of 159 tumors


title: X221LU (HG-U133B)

description: Series of 159 tumors


title: X249LU (HG-U133B)

description: Series of 159 tumors


title: X029AN (HG-U133B)

description: Series of 159 tumors


title: X351OL (HG-U133B)

description: Series of 159 tumors


title: X081UL (HG-U133B)

description: Series of 159 tumors


title: X365MA (HG-U133B)

description: Series of 159 tumors


title: X275WE (HG-U133B)

description: Series of 159 tumors


title: X192LA (HG-U133B)

description: Series of 159 tumors


title: X171SO (HG-U133B)

description: Series of 159 tumors


title: X123ER (HG-U133B)

description: Series of 159 tumors


title: X336MO (HG-U133B)

description: Series of 159 tumors


title: X331HA (HG-U133B)

description: Series of 159 tumors


title: X170FA (HG-U133B)

description: Series of 159 tumors


title: X157HA (HG-U133B)

description: Series of 159 tumors


title: X345VI (HG-U133B)

description: Series of 159 tumors


title: X136ER (HG-U133B)

description: Series of 159 tumors


title: X176TH (HG-U133B)

description: Series of 159 tumors


title: A X94A16

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: ER status


title: X056EN (HG-U133B)

description: Series of 159 tumors

tag: DEATH

tag: SUBTYPE

tag: ELSTON


title: X216AN (HG-U133B)

description: Series of 159 tumors

tag: See Series GSE1456 record for additional information


title: A X9B52

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: No systemic therapy (1=included in survival analysis)

tag: Lymph node status


title: X349LE (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE


title: X260LI (HG-U133B)

description: Series of 159 tumors


title: X079JA (HG-U133B)

description: Series of 159 tumors


title: X092NO (HG-U133B)

description: Series of 159 tumors


title: X206RI (HG-U133B)

description: Series of 159 tumors


title: X284JE (HG-U133B)

description: Series of 159 tumors


title: X019ER (HG-U133B)

description: Series of 159 tumors


title: X352AN (HG-U133B)

description: Series of 159 tumors


title: X052ZA (HG-U133B)

description: Series of 159 tumors


title: X330IG (HG-U133B)

description: Series of 159 tumors


title: A X8B87

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X89A64

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: ER status


title: A X96A21

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)


title: A X88A67

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: No systemic therapy (1=included in survival analysis)

tag: Lymph node status


title: X049SA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X90A63

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X087BU (HG-U133B)

description: Series of 159 tumors


title: A X99A50

description: Series of 249 tumours

tag: INDEX (ID)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: ER status


title: X262SP (HG-U133B)

description: Series of 159 tumors


title: X165AN (HG-U133B)

description: Series of 159 tumors


title: A X86A40

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: No systemic therapy (1=included in survival analysis)

tag: Lymph node status


title: A X87A79

description: Series of 249 tumours


title: X342BL (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON


title: X307EG (HG-U133B)

description: Series of 159 tumors

tag: See Series GSE1456 record for additional information


title: X183AN (HG-U133B)

description: Series of 159 tumors


title: X374BR (HG-U133B)

description: Series of 159 tumors


title: A X83A37

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X84A44

description: Series of 249 tumours

tag: INDEX (ID)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):

tag: ER status


title: A X85A03

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Lymph node status


title: X063PE (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON


title: X371AS (HG-U133B)

description: Series of 159 tumors

tag: See Series GSE1456 record for additional information


title: X240SM (HG-U133B)

description: Series of 159 tumors


title: A X7B96

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X82A83

description: Series of 249 tumours

tag: INDEX (ID)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):


title: A X76A44

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: ER status

tag: Lymph node status


title: A X79A35

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: X011DA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X75A01

description: Series of 249 tumours

tag: INDEX (ID)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X142SW (HG-U133B)

description: Series of 159 tumors


title: X199PO (HG-U133B)

description: Series of 159 tumors


title: A X73A01

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):


title: X174HE (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH


title: X218BE (HG-U133B)

description: Series of 159 tumors

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X117KO (HG-U133B)

description: Series of 159 tumors


title: A X77A50

description: Series of 249 tumours

tag: INDEX (ID)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: ER status

tag: Lymph node status


title: A X74A63

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X70A79

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)


title: X231CA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X72A92

description: Series of 249 tumours

tag: INDEX (ID)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):

tag: ER status

tag: Lymph node status


title: A X6B85

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X243BE (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE


title: A X69A93

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)


title: X360RI (HG-U133B)

description: Series of 159 tumors

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X66A84

description: Series of 249 tumours

tag: INDEX (ID)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis):


title: X288BE (HG-U133B)

description: Series of 159 tumors


title: X119AN (HG-U133B)

description: Series of 159 tumors


title: X213BI (HG-U133B)

description: Series of 159 tumors


title: A X67A43

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: ER status

tag: Lymph node status

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)


title: A X64A59

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: age at diagnosis

tag: tumor size (mm)


title: X276EK (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE


title: A X65A68

description: Series of 249 tumours

tag: INDEX (ID)

tag: Probability 3-like (by SWS classifier)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis)


title: X210NI (HG-U133B)

description: Series of 159 tumors

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X040TH (HG-U133B)

description: Series of 159 tumors


title: X225KA (HG-U133B)

description: Series of 159 tumors


title: A X58A50

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis):

tag: ER status

tag: Lymph node status


title: A X63A62

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X372LU (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE


title: X010BJ (HG-U133B)

description: Series of 159 tumors

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X242KR (HG-U133B)

description: Series of 159 tumors


title: A X60A05

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis)


title: X112FR (HG-U133B)

description: Series of 159 tumors


title: A X62A02

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: ER status

tag: Lymph node status


title: A X5B97

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X53A06

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):


title: A X61A53

description: Series of 249 tumours

tag: INDEX (ID)


title: A X54A09

description: Series of 249 tumours

tag: Elston (NGS) histologic grade


title: X281BR (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X56A94

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)


title: A X55A79

description: Series of 249 tumours

tag: ER status

tag: Lymph node status

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X261EN (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue


title: X191SA (HG-U133B)

description: Series of 159 tumors

tag: RELAPSE


title: X246TA (HG-U133B)

description: Series of 159 tumors

tag: DEATH


title: X259AB (HG-U133B)

description: Series of 159 tumors

tag: SUBTYPE


title: A X52A90

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)


title: A X50A91

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: No systemic therapy (1=included in survival analysis):


title: A X49A07

description: Series of 249 tumours

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER status


title: X161JO (HG-U133B)

description: Series of 159 tumors

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X137TH (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE


title: X076ER (HG-U133B)

description: Series of 159 tumors

tag: DEATH

tag: SUBTYPE


title: A X48A46

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: Lymph node status

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X46A25

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: No systemic therapy (1=included in survival analysis):


title: A X51A98

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER status


title: X178WA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X47A87

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: Lymph node status


title: X158KU (HG-U133B)

description: Series of 159 tumors

tag: SUBTYPE


title: X026NA (HG-U133B)

description: Series of 159 tumors


title: X115LU (HG-U133B)

description: Series of 159 tumors


title: A X42C57

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X018GU (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue


title: X211WA (HG-U133B)

description: Series of 159 tumors

tag: RELAPSE


title: A X41C65

description: Series of 249 tumours

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):

tag: ER status


title: X373LI (HG-U133B)

description: Series of 159 tumors

tag: DEATH

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X40C57

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Lymph node status


title: X219WO (HG-U133B)

description: Series of 159 tumors

tag: SUBTYPE


title: X172SA (HG-U133B)

description: Series of 159 tumors


title: X084GE (HG-U133B)

description: Series of 159 tumors


title: A X43C47

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X125WA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE


title: X333SI (HG-U133B)

description: Series of 159 tumors

tag: DEATH


title: A X44A53

description: Series of 249 tumours

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):

tag: ER status


title: A X39C24

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: Lymph node status


title: A X35C29

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)


title: A X45A96

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis


title: A X37C06

description: Series of 249 tumours

tag: tumor size (mm)


title: X074KA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X36C17

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER status


title: A X34C80

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: Lymph node status


title: X188AH (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue


title: A X33C30

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis):

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X003WI (HG-U133B)

description: Series of 159 tumors

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X297PE (HG-U133B)

description: Series of 159 tumors


title: X113SO (HG-U133B)

description: Series of 159 tumors


title: A X309C49

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis)


title: X024BJ (HG-U133B)

description: Series of 159 tumors


title: X031ER (HG-U133B)

description: Series of 159 tumors


title: X310WI (HG-U133B)

description: Series of 159 tumors


title: X086LI (HG-U133B)

description: Series of 159 tumors


title: X035SI (HG-U133B)

description: Series of 159 tumors


title: A X304C89

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: ER status

tag: Lymph node status


title: A X316C65

description: Series of 249 tumours

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X319AN (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON


title: X382GU (HG-U133B)

description: Series of 159 tumors

tag: See Series GSE1456 record for additional information


title: A X311A27

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):


title: A X307C50

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: ER status

tag: Lymph node status


title: A X314B55

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X361NO (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X294C04

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):


title: X309EV (HG-U133B)

description: Series of 159 tumors


title: A X301C66

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: ER status

tag: Lymph node status


title: X214WI (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE


title: A X303C36

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X298C47

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS TIME (yrs)


title: A X296C95

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)


title: A X297C26

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: No systemic therapy (1=included in survival analysis):


title: A X313A87

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: ER status


title: A X308C93

description: Series of 249 tumours

tag: Lymph node status


title: X160LU (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X318KI (HG-U133B)

description: Series of 159 tumors


title: A X290C91

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X377DE (HG-U133B)

description: Series of 159 tumors


title: X101GL (HG-U133B)

description: Series of 159 tumors


title: X296NY (HG-U133B)

description: Series of 159 tumors


title: X166JO (HG-U133B)

description: Series of 159 tumors


title: X121LE (HG-U133B)

description: Series of 159 tumors


title: X057FR (HG-U133B)

description: Series of 159 tumors


title: X376FR (HG-U133B)

description: Series of 159 tumors


title: X071AV (HG-U133B)

description: Series of 159 tumors


title: A X292C66

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)


title: X164MY (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH


title: A X286C91

description: Series of 249 tumours

tag: ER status

tag: Lymph node status


title: A X279C61

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade


title: A X289C75

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):


title: A X28C76

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis


title: A X27C82

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: tumor size (mm)


title: A X284C63

description: Series of 249 tumours

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)


title: X185NY (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X187OL (HG-U133B)

description: Series of 159 tumors


title: A X280C43

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: ER status

tag: Lymph node status


title: A X278C80

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis


title: A X282C51

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: tumor size (mm)


title: A X288C57

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):


title: X298LA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X268AR (HG-U133B)

description: Series of 159 tumors


title: A X287C67

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: ER status

tag: Lymph node status


title: A X291C17

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis


title: X111MA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH


title: A X275C70

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)

tag: tumor size (mm)


title: X264LA (HG-U133B)

description: Series of 159 tumors

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X277C64

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: X380MO (HG-U133B)

description: Series of 159 tumors


title: X215HE (HG-U133B)

description: Series of 159 tumors


title: X223LI (HG-U133B)

description: Series of 159 tumors


title: A X272C88

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: ER status

tag: Lymph node status


title: X347JA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE


title: X122FO (HG-U133B)

description: Series of 159 tumors

tag: DEATH


title: X089HO (HG-U133B)

description: Series of 159 tumors


title: X055SV (HG-U133B)

description: Series of 159 tumors


title: X356AL (HG-U133B)

description: Series of 159 tumors


title: A X266C51

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: X054BO (HG-U133B)

description: Series of 159 tumors

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X204FA (HG-U133B)

description: Series of 159 tumors


title: A X262C85

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: X045OL (HG-U133B)

description: Series of 159 tumors


title: A X265C40

description: Series of 249 tumours

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: ER status

tag: Lymph node status


title: A X268C87

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis)


title: X041LA (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH


title: X229LA (HG-U133B)

description: Series of 159 tumors

tag: SUBTYPE

tag: ELSTON


title: A X271C71

description: Series of 249 tumours

tag: INDEX (ID)

tag: No systemic therapy (1=included in survival analysis):

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X267C04

description: Series of 249 tumours

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):


title: A X270C93

description: Series of 249 tumours

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER status

tag: Lymph node status


title: A X263C82

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)


title: X126AS (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: A X269C68

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X26C23

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis):


title: A X261C94

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis)

tag: ER status

tag: Lymph node status


title: A X274C81

description: Series of 249 tumours


title: A X260C91

description: Series of 249 tumours


title: A X259C74

description: Series of 249 tumours


title: X005JO (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE

tag: DEATH

tag: SUBTYPE

tag: ELSTON

tag: See Series GSE1456 record for additional information


title: X350JO (HG-U133B)

description: Series of 159 tumors


title: X028JA (HG-U133B)

description: Series of 159 tumors


title: A X255C06

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: 2522 - mAdbID:61389

city: Bethesda

first: Sandeep

last: Dave

state: MD

address: 9000 Rockville Pike

institute: National Cancer Institute

description: mAdb experiment ID: 61389

hyb_protocol: Affymetrix Hybridization Protocol Other: Following fragmentation, 20 micrograms of cRNA were hybridized for 16 hours at 45C on LymphDX Custom Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

data_processing: The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.

label_protocol:
Affymetrix Labeling Protocol
Other: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 microg mRNA (Expression Analysis Technical Manual, 2001, Affymetrix).

extract_protocol: Sample Extraction Protocol

tag: Gender

value: male

tag: Age

tag: Tissue

value: lymph node

tag: Disease state

value: Lymphoma

tag: Individual

tag: Clinical info

value: Final pathology diagnosis:BL

value: Final microarray diagnosis:BL

value: Follow up status:alive

value: Follow up years:5.58

value: Chemotherapy:Intensive Regimen

value: ECOG performance status:2

value: LDH ratio:1.64

value: Number of nodal sites:1


title: X027JO (HG-U133B)

description: Series of 159 tumors

tag: Breast tumor tissue

tag: RELAPSE


title: CD4+ CD25-_2 (HG-U133B)

city: Braunschweig

first: Robert

last: Geffers

address: Inhoffenstr. 7

department: Dep. Molecular Bacteriology

country: Germany

institute: HCI - Helmholtz Centre for Infection Research

hyb_protocol: Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at conditions recommended by the manufacturer. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Affymetrix GCS 3000.

data_processing: The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 150.

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

growth_protocol: ex vivo

extract_protocol: Trizol

tag: genetic modification:

tag: tissue

value: Blood


title: A X258C21

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: ER status

value: ER+

tag: Lymph node status

value: LN-


title: 2528 - mAdbID:60927

description: mAdb experiment ID: 60927

tag: Gender

tag: Age

tag: Tissue

value: Follow up years:5.33

value: ECOG performance status:1


title: 2531 - mAdbID:60929

description: mAdb experiment ID: 60929

tag: Disease state

tag: Individual

tag: Clinical info

value: Final pathology diagnosis:Atypical BL

value: Follow up status:dead

value: Follow up years:0.10


title: 2538 - mAdbID:60931

description: mAdb experiment ID: 60931

value: lymph node

value: Lymphoma


title: 2533 - mAdbID:60932

description: mAdb experiment ID: 60932

value: male

value: Final microarray diagnosis:BL

value: Follow up years:10.80

value: LDH ratio:0.61


title: CD4+ CD25+_1 (HG-U133B)

tag: genetic modification:


title: A X257C87

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: No systemic therapy (1=included in survival analysis):

value: LN+

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X256C45

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

value: ER-


title: A X250C78

description: Series of 249 tumours

tag: No systemic therapy (1=included in survival analysis)

tag: ER status

tag: Lymph node status


title: A X254C80

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)


title: 2530 - mAdbID:60928

description: mAdb experiment ID: 60928

tag: Gender

tag: Age

tag: Tissue

tag: Disease state

tag: Individual

tag: Clinical info

value: Final pathology diagnosis:BL

value: Follow up years:0.50

value: Chemotherapy:Intensive Regimen

value: ECOG performance status:0

value: LDH ratio:1.82

value: Number of nodal sites:2


title: A X252C64

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Genetic grade signature status prediction (by SWS classifier)

tag: No systemic therapy (1=included in survival analysis):

value: ER+

value: LN-

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X248C91

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)


title: CD4+ CD25+_2 (HG-U133B)

tag: genetic modification:

tag: tissue

value: Blood


title: A X253C20

description: Series of 249 tumours

tag: ER status

tag: Lymph node status


title: A X24C30

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade


title: 2529 - mAdbID:60926

description: mAdb experiment ID: 60926

tag: Gender

tag: Age

tag: Tissue

value: lymph node

tag: Disease state

tag: Individual

tag: Clinical info

value: Final pathology diagnosis:DLBCL

value: Final microarray diagnosis:DLBCL GCB

value: Follow up status:alive

value: Follow up years:4.25

value: ECOG performance status:2

value: LDH ratio:0.67


title: A X247C76

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X246C75

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: ER status


title: A X249C42

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

value: ER-

tag: Lymph node status

value: LN?


title: A X251C14

description: Series of 249 tumours


title: A X245C22

description: Series of 249 tumours

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):

value: LN+


title: 2536 - mAdbID:60930

description: mAdb experiment ID: 60930

tag: Gender

value: male

tag: Age

tag: Tissue

tag: Disease state

value: Lymphoma

tag: Individual

tag: Clinical info

value: Final pathology diagnosis:BL

value: Final microarray diagnosis:BL

value: Follow up status:dead

value: Follow up years:0.50

value: Chemotherapy:Intensive Regimen

value: ECOG performance status:1

value: LDH ratio:3.74

value: Number of nodal sites:1


title: 2532 - mAdbID:60925

description: mAdb experiment ID: 60925

value: lymph node

value: Final pathology diagnosis:Atypical BL

value: Follow up status:alive

value: Follow up years:11.90

value: LDH ratio:1.77


title: 2523 - mAdbID:60900

description: mAdb experiment ID: 60900

value: Follow up years:4.92

value: ECOG performance status:2

value: LDH ratio:0.58


title: 2537 - mAdbID:60916

description: mAdb experiment ID: 60916

value: male

value: Lymphoma

value: Follow up years:5.67

value: LDH ratio:4.13


title: A X244C89

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

value: ER+

value: LN+

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: 2540 - mAdbID:60898

description: mAdb experiment ID: 60898

value: Final microarray diagnosis:BL

value: Follow up years:1.75

value: Chemotherapy:Intensive Regimen

value: ECOG performance status:3

value: LDH ratio:1.49


title: A X243C70

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: ER status

value: LN-


title: 2539 - mAdbID:60899

description: mAdb experiment ID: 60899

tag: Gender

tag: Age

tag: Tissue

value: lymph node

tag: Disease state

value: Final pathology diagnosis:Atypical BL

value: Follow up status:dead

value: Follow up years:0.58

value: ECOG performance status:1

value: LDH ratio:1.24

value: Number of nodal sites:1


title: 2524 - mAdbID:60892

description: mAdb experiment ID: 60892

value: male

value: Lymphoma

tag: Individual

tag: Clinical info

value: Final pathology diagnosis:BL

value: Follow up status:alive

value: Follow up years:1.08

value: ECOG performance status:2

value: LDH ratio:8.14


title: 2521 - mAdbID:60890

description: mAdb experiment ID: 60890

value: Final microarray diagnosis:BL

value: Follow up years:4.92

value: Chemotherapy:Intensive Regimen


title: 2464 - mAdbID:53954

description: mAdb experiment ID: 53954

value: lymph node

value: Final pathology diagnosis:DLBCL

value: Follow up years:0.75

value: ECOG performance status:3

value: LDH ratio:11.24

value: Number of nodal sites:4


title: 2520 - mAdbID:60889

description: mAdb experiment ID: 60889

value: Follow up status:dead

value: Follow up years:0.50

value: LDH ratio:2.89

value: Number of nodal sites:1


title: A X238C87

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: No systemic therapy (1=included in survival analysis):

value: ER-

tag: Lymph node status

value: LN-


title: 2466 - mAdbID:53956

description: mAdb experiment ID: 53956

value: male

value: Lymphoma

value: Follow up years:0.08

value: Chemotherapy:CHOP-Like Regimen

value: ECOG performance status:2

value: LDH ratio:1.39


title: 2461 - mAdbID:53953

description: mAdb experiment ID: 53953

value: female

value: lymph node

value: Final pathology diagnosis:DLBCL

value: Final microarray diagnosis:BL

value: Follow up status:alive

value: Follow up years:4.80

value: Chemotherapy:Intensive Regimen

value: LDH ratio:1.01

value: Number of nodal sites:2


title: A X241C01

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

value: ER+

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X23C52

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: ER status

value: LN-


title: A X236C55

description: Series of 249 tumours


title: A X240C54

description: Series of 249 tumours

value: LN+


title: 2456 - mAdbID:53947

description: mAdb experiment ID: 53947

tag: Gender

tag: Age

tag: Tissue

tag: Disease state

value: Lymphoma

tag: Individual

tag: Clinical info

value: Final microarray diagnosis:DLBCL GCB

value: Follow up years:8.00

value: ECOG performance status:1

value: LDH ratio:0.8


title: 2460 - mAdbID:53952

description: mAdb experiment ID: 53952

value: male

value: Final microarray diagnosis:DLBCL ABC

value: Follow up status:dead

value: Follow up years:1.58


title: A X232C58

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: No systemic therapy (1=included in survival analysis):

tag: Lymph node status


title: A X235C20

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

value: ER?

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X242C21

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: ER status


title: 2455 - mAdbID:53946

description: mAdb experiment ID: 53946

tag: Gender

value: female

tag: Age

tag: Tissue

value: lymph node

tag: Disease state

tag: Individual

tag: Clinical info

value: Final pathology diagnosis:High grade NOS

value: Follow up years:3.42

value: Chemotherapy:CHOP-Like Regimen


title: A X233C91

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

value: ER+

tag: Lymph node status

value: LN-


title: 2454 - mAdbID:53945

description: mAdb experiment ID: 53945

value: Lymphoma

value: Follow up status:alive

value: Follow up years:19.08

value: Number of nodal sites:0


title: A X237C56

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: No systemic therapy (1=included in survival analysis):

value: LN+

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis


title: 2453 - mAdbID:53944

description: mAdb experiment ID: 53944

tag: Gender

value: male

value: Final pathology diagnosis:Atypical BL

value: Final microarray diagnosis:BL

value: Follow up years:0.42


title: 2448 - mAdbID:53942

description: mAdb experiment ID: 53942

tag: Age

value: Final pathology diagnosis:BL

value: Follow up years:12.08

value: Chemotherapy:Intensive Regimen

value: ECOG performance status:1

value: LDH ratio:1.56

value: Number of nodal sites:2


title: A X230C47

description: Series of 249 tumours

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: ER status

value: ER+

tag: tumor size (mm)


title: A X22C62

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

value: LN-


title: A X234C15

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)


title: A X231C80

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: Lymph node status


title: 2446 - mAdbID:53940

description: mAdb experiment ID: 53940

tag: Tissue

value: lymph node

tag: Disease state

value: Lymphoma

tag: Individual

tag: Clinical info

value: Submitting diagnosis:High-grade DLBCL

value: Final pathology diagnosis:High grade DLBCL

value: Final microarray diagnosis:DLBCL ABC


title: 2447 - mAdbID:53941

description: mAdb experiment ID: 53941

value: Final microarray diagnosis:DLBCL GCB


title: A X229C44

description: Series of 249 tumours

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis


title: A X227C50

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: ER status

tag: tumor size (mm)


title: 2444 - mAdbID:53939

description: mAdb experiment ID: 53939


title: 2442 - mAdbID:53928

description: mAdb experiment ID: 53928

tag: Gender

value: female

tag: Age

value: Final pathology diagnosis:High grade NOS

value: Follow up status:dead

value: Follow up years:7.25


title: 2475 - mAdbID:53540

description: mAdb experiment ID: 53540

value: Final pathology diagnosis:DLBCL

value: Follow up years:0.17

value: Chemotherapy:CHOP-Like Regimen

value: LDH ratio:4.05

value: Number of nodal sites:3


title: 2472 - mAdbID:53537

description: mAdb experiment ID: 53537

value: Final pathology diagnosis:BL

value: Final microarray diagnosis:BL

value: Follow up years:2.08

value: ECOG performance status:3

value: LDH ratio:2.16

value: Number of nodal sites:2


title: 2474 - mAdbID:53539

description: mAdb experiment ID: 53539

value: male

value: lymph node

value: Lymphoma

value: Follow up years:0.25

value: LDH ratio:8.2

value: Number of nodal sites:1


title: 2473 - mAdbID:53538

description: mAdb experiment ID: 53538

value: female

value: Final pathology diagnosis:DLBCL

value: Final microarray diagnosis:DLBCL ABC

value: Follow up status:alive

value: Follow up years:6.83

value: Chemotherapy:Intensive Regimen

value: ECOG performance status:0

value: LDH ratio:1.66


title: 2437 - mAdbID:53393

description: mAdb experiment ID: 53393

value: Submitting diagnosis:High-grade DLBCL

value: Final pathology diagnosis:High grade DLBCL


title: 2438 - mAdbID:53394

description: mAdb experiment ID: 53394

value: Final microarray diagnosis:BL

value: Follow up status:dead

value: Chemotherapy:CHOP-Like Regimen

value: ECOG performance status:2


title: 2443 - mAdbID:53930

description: mAdb experiment ID: 53930

value: male

value: lymph node

value: Lymphoma

value: Final pathology diagnosis:BL

value: Follow up years:7.92


title: 2432 - mAdbID:53389

description: mAdb experiment ID: 53389

value: female

value: Follow up years:3.75


title: A X224C93

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

value: ER-

value: LN-


title: A X217C79

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

value: ER+

tag: Lymph node status


title: 2433 - mAdbID:53390

description: mAdb experiment ID: 53390

tag: Tissue

tag: Disease state

tag: Individual

tag: Clinical info

value: Follow up status:alive

value: Follow up years:0.75


title: 2431 - mAdbID:53388

description: mAdb experiment ID: 53388

value: Final pathology diagnosis:Atypical BL

value: Follow up years:0.42

value: LDH ratio:0.88

value: Number of nodal sites:2


title: 2435 - mAdbID:53392

description: mAdb experiment ID: 53392

value: Submitting diagnosis:High-grade DLBCL

value: Final pathology diagnosis:High grade DLBCL

value: Final microarray diagnosis:DLBCL ABC


title: A X225C52

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: ER+, endocrine therapy only (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):

value: LN+

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis


title: A X223C51

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER status

tag: tumor size (mm)


title: CD4+ CD25-_1 (HG-U133B)

tag: genetic modification:

tag: tissue

value: Blood


title: A X21C28

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: Lymph node status


title: A X216C61

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)


title: 2430 - mAdbID:53387

description: mAdb experiment ID: 53387

tag: Gender

value: male

tag: Age

tag: Tissue

value: lymph node

tag: Disease state

value: Lymphoma

tag: Individual

tag: Clinical info

value: Final pathology diagnosis:BL

value: Final microarray diagnosis:BL

value: Follow up status:dead

value: Follow up years:1.50


title: A X221C14

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER status

value: ER+

value: LN-

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: A X220C70

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: ER+, endocrine therapy only (1=included in survival analysis):

tag: No systemic therapy (1=included in survival analysis)

tag: Lymph node status


title: A X226C06

description: Series of 249 tumours

tag: Genetic grade signature status prediction (by SWS classifier)

tag: DFS EVENT (0=censored; 1=event defined as any type of recurrence (local, regional or distant) or death from breast cancer

tag: All patients (1=included in survival analysis)

tag: No systemic therapy (1=included in survival analysis):


title: A X213C36

description: Series of 249 tumours


title: A X212C21

description: Series of 249 tumours

value: ER?


title: A X222C26

description: Series of 249 tumours


title: A X211C88

description: Series of 249 tumours

value: LN?


title: A X218C29

description: Series of 249 tumours


title: 2428 - mAdbID:53386

description: mAdb experiment ID: 53386

tag: Tissue

tag: Disease state

tag: Individual

tag: Clinical info


title: A X210C72

description: Series of 249 tumours

tag: Probability 1-like (by SWS classifier)

tag: Probability 3-like (by SWS classifier)

tag: DFS TIME (yrs)

tag: ER status


title: 2420 - mAdbID:53380

description: mAdb experiment ID: 53380

tag: Gender

value: female

tag: Age

value: Follow up status:alive

value: Follow up years:1.33

value: Chemotherapy:CHOP-Like Regimen

value: ECOG performance status:0

value: LDH ratio:0.86

value: Number of nodal sites:0


title: 2426 - mAdbID:53384

description: mAdb experiment ID: 53384

value: lymph node

value: Submitting diagnosis:High-grade DLBCL

value: Final pathology diagnosis:High grade DLBCL

value: Final microarray diagnosis:DLBCL ABC


title: 2427 - mAdbID:53385

description: mAdb experiment ID: 53385

value: Lymphoma


title: 2421 - mAdbID:53381

description: mAdb experiment ID: 53381

value: Final pathology diagnosis:DLBCL

value: Final microarray diagnosis:DLBCL GCB


title: 2418 - mAdbID:53378

description: mAdb experiment ID: 53378

value: male

value: Final pathology diagnosis:BL

value: Final microarray diagnosis:BL

value: Follow up years:1.83

value: Chemotherapy:Intensive Regimen

value: ECOG performance status:2

value: Number of nodal sites:1


title: 2406 - mAdbID:53369

description: mAdb experiment ID: 53369

value: Follow up status:alive

value: Follow up years:3.42

value: ECOG performance status:1


title: 2409 - mAdbID:53370

description: mAdb experiment ID: 53370

value: lymph node


title: A X208C06

description: Series of 249 tumours

tag: INDEX (ID)

tag: Elston (NGS) histologic grade

tag: ER+, endocrine therapy only (1=included in survival analysis):

value: ER+

value: LN?

tag: p53 seq mut status (p53+=mutant; p53-=wildtype)

tag: age at diagnosis

tag: tumor size (mm)


title: 2402 - mAdbID:53367

description: mAdb experiment ID: 53367

value: Final pathology diagnosis:Atypical BL