title: B CELLS F2B (+)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/40847.gif

source_name: 3 ug Stratagene 2 rounds (from AW & SP 12/2001)

source_name: B CELLS 0328 (+) 6 ug

tag: B CELLS 0328 (+) 6 ug


title: High nitrogen 85hrs vs. low nitrogen 85hrs

status: Public on May 23 2006

type: RNA

city: Stanford

last: Stanford Microarray Database

state: CA

address: 300 Pasteur Drive

department: Stanford University, School of Medicine

country: USA

institute: Stanford Microarray Database (SMD)

description:
Simple annotation: Stress, Nitrogen
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/8003.gif

data_processing: VALUE is Log (base 2) of the ratio of the mean of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

molecule: total RNA

organism: Saccharomyces cerevisiae

source_name: Low nitrogen 85hrs

tag: Low nitrogen 85hrs

source_name: High nitrogen 85hrs

tag: High nitrogen 85hrs


title: CD4 M2 (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/40839.gif

data_processing: VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

organism: Homo sapiens

tag: 3 ug Stratagene 2 rounds (from AW & SP 12/2001)


title: CD8 F1B (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/40841.gif


title: B CELLS F2A (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/40844.gif

source_name: B CELLS 0226 (-) 6 ug

tag: B CELLS 0226 (-) 6 ug


title: CD4 F3 (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/40840.gif


title: B CELLS F3 (+)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41094.gif

source_name: B CELLS 0606 (+) 6 ug

tag: B CELLS 0606 (+) 6 ug


title: CD4 F1A (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41091.gif


title: PBMC F3     *auto_grid

description:
Simple annotation: Normal tissue, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41088.gif

source_name: PBMC 0606 6 ug

tag: PBMC 0606 6 ug


title: B CELLS M3 (+)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41069.gif

source_name: B CELLS 0219 (+) 6 ug

tag: B CELLS 0219 (+) 6 ug


title: CD8 F3 (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41092.gif


title: lo38 vs lo58

description:
Simple annotation: Stress, Nitrogen
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/7895.gif

source_name: 40mg/L nitrogen, 33hrs.

tag: 40mg/L nitrogen, 33hrs.

source_name: 40mg/L nitrogen, 58hrs.

tag: 40mg/L nitrogen, 58hrs.


title: Pax M1    *auto_grid

description:
Simple annotation: Normal tissue, Whole blood
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41096.gif

source_name: Pax 0402 6 ug

tag: Pax 0402 6 ug


title: CD8 F2B (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41067.gif


title: CD8 M1 (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41068.gif


title: High Nitrogen 33hrs vs. 58hrs.

description:
Simple annotation: Stress, Nitrogen
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/7998.gif

source_name: High Nitrogen 33hrs

tag: High Nitrogen 33hrs

source_name: High Nitrogen 58hrs

tag: High Nitrogen 58hrs


title: Basal epidermal cells (e/e) (3) vs. Reference

status: Public on May 24 2006

description:
Simple annotation: Pigmentation, Skin
Image: http://smd.stanford.edu/MicroArray/gifs/2002-03/25947.gif

organism: Mus musculus

source_name: Reference (brain, liver, neonate, whole dorsal skin) (50ug)

source_name: Basal epidermal cells e/e (3) (50ug)

tag: Basal epidermal cells e/e (3) (50ug)


title: High nitrogen 33hrs. vs. low nitrogen 33hrs.

description:
Simple annotation: Stress, Nitrogen
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/8000.gif

source_name: High nitrogen 33hrs

tag: High nitrogen 33hrs

source_name: Low nitrogen 33hrs

tag: Low nitrogen 33hrs


title: Substantia Nigra MML Sample4 RMA, MAS 5, dChip

status: Public on May 12 2006

city: Rochester

first: Howard

middle: J

last: Federoff

state: NY

address: 601 Elmwood Ave Box 645

department: Center for Aging and Developmental Biology

institute: University of Rochester

description: MAS 5.0, scaled to 500; Affymetrix data Mining Tool 3.0; dChip was used to determine differentially expressed genes (MBEI); Statistical Analysis of Microarrays(SAM), as described in Miller et al. 2004.

hyb_protocol: Affymetrix Standard

scan_protocol: Affymetrix Standard using U74A mask file.

data_processing: Raw intensity Data Normalize via RMA, MAS5.0, dChip

label: Biotinylated UTP & CTP

source_name: Pooled Substantia Nigra C57Bl/6 MPTP MML

label_protocol: Enzo IVT Protocol

extract_protocol: Trizol

treatment_protocol: Mice received 4 injections of MPTP-HCL(30mg/kg, IP).  The first and second doses were separated by 16 hr.  Mice were killed 7d after final injection (MML-Mouse MPTP Late).  The SN was dissected bilaterally from six like-treated mice, pooled and RNA was prepared from Trizol homogenates per the manufacturer's protocol. (Invitrogen)

tag: Gender

value: Male

tag: Age

value: 10 Weeks

tag: Tissue

value: Substantia Nigra dissected bilaterally from six like-treated mice.


title: vcc1629 lactate aerobic

status: Public on May 20 2006

description:
Simple annotation: Environmental conditions, wild-type
Image: http://smd.stanford.edu/MicroArray/gifs/2004-01/47999.gif

organism: Vibrio cholerae

source_name: mid log LB 2 ug RNA aerobic

tag: mid log LB 2 ug RNA aerobic

source_name: mid log M9 + 0.5% lactate aerobic ( 2 ug RNA)


title: PBMC F2B     *auto_grid

description:
Simple annotation: Normal tissue, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41090.gif

source_name: 3 ug Stratagene 2 rounds (from AW & SP 12/2001)

source_name: PBMC 0328 6 ug

tag: PBMC 0328 6 ug


title: vcc1630  maltose aerobic

description:
Simple annotation: Environmental conditions, wild-type
Image: http://smd.stanford.edu/MicroArray/gifs/2004-01/47992.gif

source_name: mid log M9 + 0.5% maltose aerobic ( 2 ug RNA)


title: vcc1631  maltose aerobic

description:
Simple annotation: Environmental conditions, wild-type
Image: http://smd.stanford.edu/MicroArray/gifs/2004-01/47993.gif

tag: mid log M9 + 0.5% maltose aerobic ( 2 ug RNA)


title: vcc1658  lactate aerobic

description:
Simple annotation: Environmental conditions, wild-type
Image: http://smd.stanford.edu/MicroArray/gifs/2004-01/47996.gif

tag: mid log M9 + 0.5% lactate aerobic ( 2 ug RNA)


title: vcc1657  lactate aerobic

description:
Simple annotation: Environmental conditions, wild-type
Image: http://smd.stanford.edu/MicroArray/gifs/2004-01/47997.gif


title: vcc1650  maltose aerobic

description:
Simple annotation: Environmental conditions, wild-type
Image: http://smd.stanford.edu/MicroArray/gifs/2004-01/47994.gif


title: Substantia Nigra MME Sample3 RMA, MAS 5, dChip

data_processing: Raw intensity data acquired from Affymetrix platform were RMA Normalized.

source_name: Pooled Substantia nigra C57BL/6 MPTP MME

treatment_protocol: Mice received 4 injections of MPTP-HCL(30mg/kg, IP).  The first and second doses were separated by 16 hrs. Mice were killed 24 hrs after injection. (MME - Mouse MPTP Early).  The SN was dissected bilaterally from six like-treated mice, pooled and RNA was prepared from Trizol homogenates per the manufacturer's protocol. (Invitrogen)

tag: Strain

value: Substantia Nigra(SN) dissected bilaterally from six like-treated mice.


title: vcc1628  lactate aerobic

description:
Simple annotation: Environmental conditions, wild-type
Image: http://smd.stanford.edu/MicroArray/gifs/2004-01/47998.gif


title: Substantia Nigra MML Sample2 RMA, MAS 5, dChip

scan_protocol: Affymetrix Standard using U74A mask file

data_processing: Raw intensity data acquired from Affymetrix platform were RMA Normalized

source_name: Pooled Substantia Nigra C57BL/6 MPTP MML


title: vcc1649  maltose aerobic

description:
Simple annotation: Environmental conditions, wild-type
Image: http://smd.stanford.edu/MicroArray/gifs/2004-01/47995.gif


title: PBMC F1B     *auto_grid

description:
Simple annotation: Normal tissue, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41065.gif

tag: 3 ug Stratagene 2 rounds (from AW & SP 12/2001)

source_name: PBMC 0301 6 ug

tag: PBMC 0301 6 ug


title: Substantia Nigra Control Sample1 RMA, MAS 5, dChip

description: MAS 5.0, scaled to 500; Affymetrix Data Mining Tool 3.0; dChip was used to determine differentially expressed genes (MBEI); Statistical Analysis of microarrays(SAM)

source_name: Pooled Substantia Nigra C57BL/6 Saline injection

label_protocol: Enzo IVT protocol

treatment_protocol: Mice received 4 injections of 0.9% sterile saline, of equal volume to treatment group.  The first and second doses were separated by 16 hr. Mice were killed 24hr or 7d after injection.  The SN was dissected bilaterally from six like-treated mice, pooled and RNA was prepared from Trizol homogenates per the manufacturer's protocol. (Invitrogen)

value: Substantia Nigra(SN) disected bilaterally from six like-treated mice


title: CD4 F2B (-)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/41066.gif


title: B CELLS M1 (+)     *auto_grid

description:
Simple annotation: Normal tissue, Blood cell subtype
Image: http://smd.stanford.edu/MicroArray/gifs/2003-05/40846.gif

source_name: B CELLS 0402 (+) 6 ug

tag: B CELLS 0402 (+) 6 ug


title: Substantia Nigra Control Sample4 RMA, MAS 5, dChip

scan_protocol: Affymetrix Standare using U74A mask file

treatment_protocol: Mice received 4 injections of 0.9% sterile saline, of equal volume to treatment group. The first and second doses were separated by 16 hr. Mice were killed 24hr or 7d after injection. The SN was dissected bilaterally from six like-treated mice, pooled and RNA was prepared from Trizol homogenates per the manufacturer's protocol. (Invitrogen)

tag: TissueL Substantia Nigra(SN) dissected bilaterally from six like-treated mice.


title: Substantia Nigra Control Sample3 RMA, MAS 5, dChip

description: MAS 5.0, scaled to 500; Affymetrix Data Mining Tool 3.0; dChip was used to determine differentially expressed genes (MBEI); Statisticaly Analysis of Microarrays (SAM), as described in Miller et al. 2004.


title: Low weight gainer KOZAK2_ABI_HYP_L2

status: Public on Apr 28 2006

city: Baton Rouge

first: Jessica

middle: C

last: Hogan

state: LA

address: 6400 Perkins Rd.

department: Molecular Genetics

institute: Pennington Biomedical Research Center

description: Pooled hypothalamus RNA samples from 20 C57BL/6J mice with 'low' weight gain after 6 weeks on a high fat diet (D12331;Research Diets, New Brunswick, NJ), followed by 2 weeks of low fat diet, and 6 weeks on a high fat diet. Microarrays were performed in quadruplicate, L1, L2, L3, L4.

hyb_protocol: Microarray hybridization (using twenty micrograms of fragmented, DIG-labeled cRNA) and processing were performed according to Applied Biosystems protocols.

scan_protocol: Chemiluminescence detection, imaging, auto gridding, and image analysis was done according to Applied Biosystems protocols and the 1700 Chemiluminescent Microarray Analyzer Software v. 1.0.3.

data_processing: Signal intensities across microarrays were normalized using the trimmed means scale (Spotfire DecisionSite for Functional Genomics, Somerville, MA).

label: DIG-UTP

source_name: Hypothalamus

label_protocol: 1 ug of total RNA was used to transcribe DIG-labeled cRNA using Applied Biosystems Chemiluminescent RT-IVT Kit V2.0.

extract_protocol: Tissues were quickly removed and frozen in liquid nitrogen and stored at -80C for subsequent preparation of total RNA. Total RNA was isolated using TRI-Reagent (Molecular Research Center Inc. Cincinnati, Ohio) with modifications to remove DNA using the Qiagen RNAeasy columns and DNaseI Kit (Qiagen, Valencia, CA). RNA was stored at –70C in RNase-free H2O supplemented with the RNase inhibitor Superasin (Ambion, Austin, TX) as per manufacturers directions. Quality and quantity of RNA was determined using a Agilent Bioanalyzer as per manufacturers procedures (Agilent Technologies, Palo Alto, CA).

tag: Mouse hypothalamus


title: Substantia Nigra Control Sample2 RMA, MAS 5, dChip

description: MAS 5.0, scaled to 500; Affymetrix Data Mining Tool 3.0; dChip was used to determine differentially expressed genes (MBEI); Statistical Analysis of Microarrays (SAM), as described in Miller et al. 2004.


title: High weight gainer KOZAK2_ABI_HYP_H4

description: Pooled hypothalamus RNA samples from 20 C57BL/6J mice with 'high' weight gain after 6 weeks on a high fat diet (D12331;Research Diets, New Brunswick, NJ), followed by 2 weeks of low fat diet, and 6 weeks on a high fat diet. Microarrays were performed in quadruplicate, H1, H2, H3, H4.


title: Substantia Nigra MML Sample1 RMA, MAS 5, dChip

description: MAS 5.0, scaled to 500; Affymetrix data Mining Tool 3.0; dChip was used to determine differentially expressed genes (MBEI); Statistical Analysis of Microarrays(SAM), as described in Miller et al. 2004.

scan_protocol: Affymetrix Standard using U74A mask

treatment_protocol: Mice received 4 injections of MPTP-HCL(30mg/kg, IP).  The first and second doses were separated by 16 hr. Mice were killed 7d after final injection (MML-Mouse MPTP Late).  The SN was dissected bilaterally from six like-treated mice, pooled and RNA was prepared from Trizol homogenates per the manufacturer's protocol. (Invitrogen)

tag: Age:10 Weeks

tag: Tissue:Substantia Nigra(SN) dissected bilaterally from six like-treated mice.


title: Low weight gainer KOZAK2_ABI_HYP_L4


title: Low weight gainer KOZAK2_ABI_HYP_L3


title: Low weight gainer KOZAK2_ABI_HYP_L1


title: Substantia Nigra MME Sample1 RMA, MAS 5, dChip

source_name: Pooled Substantia Nigra C57BL/6 MPTP Injection MME


title: High weight gainer KOZAK2_ABI_HYP_H3


title: High weight gainer KOZAK2_ABI_HYP_H1


title: High weight gainer KOZAK2_ABI_HYP_H2


title: Low weight gainer Kozak1_ABI_ING_L3

first: Robert

middle: A.

last: Koza

department: Genomics Core Facility

description: Pooled inguinal fat from 8 C57BL/6J mice with 'low' weight gain after 4 weeks on a high fat diet (D12331;Research Diets, New Brunswick, NJ).  Microarrays were performed in triplicate, L1, L2 and L3.

data_processing: Signal intensities across microarrays were normalized using the quantile-quantile method (www.bioconductor.org).

source_name: inguinal fat

extract_protocol: Tissues were quickly removed and frozen in liquid nitrogen and stored at -80C for subsequent preparation of total RNA. Total RNA was isolated using TRI-Reagent (Molecular Research Center Inc. Cincinnati, Ohio) with modifications to remove DNA using the Qiagen RNAeasy columns and DNaseI Kit (Qiagen, Valencia, CA). RNA was stored at –70C in RNase-free H2O supplemented with the RNase inhibitor Superasin (Ambion, Austin, TX) as per manufacturers directions.  Quality and quantity of RNA was determined using a Agilent Bioanalyzer as per manufacturers procedures (Agilent Technologies, Palo Alto, CA).

tag: mouse adipose tissue


title: Low weight gainer Kozak1_ABI_ING_L2


title: High weight gainer Kozak1_ABI_ING_H3

description: Pooled inguinal fat from 8 C57BL/6J mice with 'high' weight gain after 4 weeks on a high fat diet (D12331;Research Diets, New Brunswick, NJ).  Microarrays were performed in triplicate, H1, H2 and H3.


title: Substantia Nigra MML Sample3 RMA, MAS 5, dChip

value: Substantia nigra(SN) dissected bilaterally from six like-treated mice.


title: 229_EtOH_7_Cy5_vs_EtOH_8_Cy3_REV

status: Public on Mar 31 2006

city: Ottawa

first: Helen

middle: Rose

last: Jensen

state: Ontario

address: 30 Marie-Curie street

department: Ottawa-Carleton Institute of Biology

country: Canada

institute: University of Ottawa

description: This dye-reversal hybridization compared the gene expression profiles after 6 hours of two separate pools of Drosophila which received identical treatments.  All flies were treated topically with 99% ethanol.

hyb_protocol: Hybridization protocol as specified in Neal et al. (2003), Genome 46: 879-892. 80 μg of total RNA from the control and treated samples were hybridized.

scan_protocol: Scan protocol using the ScanArray 4000 XL (GSI Lumonics/Packard Biochips) as specified in Neal et al. (2003), Genome 46: 879-892.

data_processing: Quantarray Microarray Analysis Software version 3.0 (Packard BioScience, copyright 2001) was used to quantify image data. Spot and background intensity were measured using the adaptive circle quantification method. Gene TrafficTM Duo, version 2.8 (Iobion Informatics, copyright 2002) was used for further analysis. Data normalization was performed on background subtracted spots on a subgrid basis using the Locally Weighted Scatter Plot Smoother (LOWESS) algorithm with a smoothing factor of 20. Spots with intensity values less than 100 units and spots with intensity values below the average background intensity value and/or below the local background intensity value were excluded from normalization and analysis. Data was filtered so as to exclude all genes with less than two-thirds of spots being usable as defined by quality filters and by a mean differential expression ratio with a coefficient of variance higher than 100%.

organism: Drosophila melanogaster

label_protocol: 80 μg of total RNA was labeled using the direct labeling protocol as specified in Neal et al. (2003), Genome 46: 879-892.

extract_protocol: Total RNA from approximately 240 adult female Drosophila was isolated using the acid guanidium thiocyanate-phenol-choloroform extraction method (Chomczynski and Sacchi, 1987). Samples were homogenized in 200 μL of solution D using a Kontes pestle and further homogenized with 3 short sonicator pulses after adding an additional 800 μL of solution D. Insoluble material was removed from samples by centrifuging at 16 000 x g for 3 minutes and transferring the supernatant to new microtubes. Three washes with cold 80% EtOH were performed to ensure the removal of red coloured eye pigments and organic contaminants from the RNA pellet. RNA samples with (A260/A280) values between 1.8 and 2.0 were considered suitable for microarray analysis.

treatment_protocol: Treatment: 2 mL of 99% ethanol, application was topical using a Potter's tower and the time elapsed between application and sampling was 6 hours.

value: Oregon-R

tag: Sex

value: Female

value: 4-10 days (after adult emergence)

tag: Temperature:23 degrees Celsius

tag: Relative Humidity

tag: Label type

value: Reversed


title: 220_EtOH_3_Cy5_vs_EtOH_4_Cy3_REV

tag: Age


title: 221_EtOH_1_Cy5_vs_EtOH_2_Cy3_REV


title: High weight gainer Kozak1_ABI_ING_H2


title: High weight gainer Kozak1_ABI_ING_H1


title: 219_EtOH_5_Cy5_vs_EtOH_6_Cy3_REV


title: 223_EtOH_5_Cy3_vs_EtOH_6_Cy5

description: This hybridization compared the gene expression profiles after 6 hours of two separate pools of Drosophila which received identical treatments.  All flies were treated topically with 99% ethanol.

value: Normal


title: 222_EtOH_7_Cy3_vs_EtOH_8_Cy5


title: 213_EtOH_1_Cy3_vs_EtOH_2_Cy5


title: Low weight gainer Kozak1_ABI_ING_L1


title: Substantia Nigra MME Sample2 RMA, MAS 5, dChip

source_name: Pooled Substantia Nigra C57BL/6 MPTP MME

tag: Gender

tag: Tissue


title: 212_EtOH_3_Cy3_vs_EtOH_4_Cy5


title: Substantia Nigra MME Sample4 RMA, MAS 5, dChip


title: 12667548_H2O_vs_EtOH

description: This sample compared a sample of adult Drosophila females exposed topically to distilled H2O to a sample that was exposed topically to 99% ethanol.  This was to measure the effect of 99% ethanol upon gene expression in this insect.

source_name: H2O treated sample_replicate 1_Control

treatment_protocol:
-Treated topically with a Potter's tower used to spray a 2 mL volume of DH2O mist upon insects.
-6 hours between treatment and sampling

value: female

tag: Developmental stage

value: adult

value: 4-10 days

source_name: Ethanol treated sample_replicate 1

treatment_protocol:
-Treated topically with a Potter's tower used to spray a 2 mL volume of 99% EtOH mist upon insects.
-6 hours between treatment and sampling


title: 12667597_H2O_2_vs_EtOH_2

source_name: H2O treated sample_replicate 2_Control

treatment_protocol: -Treated topically with a Potter's tower used to spray a 2 mL volume of DH2O mist upon insects.

tag: Strain

source_name: Ethanol treated sample_replicate 2

treatment_protocol: -Treated topically with a Potter's tower used to spray a 2 mL volume of 99% EtOH mist upon insects.


title: STT689B-MFH

status: Public on Mar 15 2006

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24015.gif

source_name: CRH mRNA

tag: CRH mRNA

source_name: STT689B mRNA

tag: STT689B mRNA


title: STT1776-SS

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24431.gif

source_name: STT1776 mRNA

tag: STT1776 mRNA


title: STT1774-SS

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24429.gif

source_name: STT1774 mRNA

tag: STT1774 mRNA


title: 129SvJ_2- P.1 output

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-03/60300.gif

organism: Salmonella enterica subsp. enterica serovar Typhimurium

source_name: 10X library

tag: 10X library

source_name: P.1 output (spleen pool)

tag: P.1 output (spleen pool)


title: STT1778-LEIO

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24231.gif

source_name: STT1778 mRNA

tag: STT1778 mRNA


title: STT709B-MFH

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24144.gif

source_name: STT709B mRNA

tag: STT709B mRNA


title: STT1737C-SS

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24432.gif

source_name: STT1737C mRNA

tag: STT1737C mRNA


title: STT607D-LEIO

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24434.gif

source_name: STT607D mRNA

tag: STT607D mRNA


title: 129SvJ_2- P.2 input

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-03/60301.gif

source_name: P.2 input (P.1 spleen)

tag: P.2 input (P.1 spleen)


title: STT1637-SFT

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/17123.gif

source_name: CRG mRNA

tag: CRG mRNA

source_name: STT1637 mRNA

tag: STT1637 mRNA


title: STT742F-LEIO

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24228.gif

source_name: STT742F mRNA

tag: STT742F mRNA


title: STT597-SFT

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/17125.gif

source_name: STT597 mRNA

tag: STT597 mRNA


title: 129SvJ_2- P.1 input

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-03/60299.gif

source_name: P.1 input

tag: P.1 input


title: STT417B-MFH

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24139.gif

source_name: STT417B mRNA

tag: STT417B mRNA


title: STT2775-SFT

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27875.gif

source_name: CRH

tag: CRH

source_name: STT2775-SFT mRNA

tag: STT2775-SFT mRNA


title: STT200C-SFT

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27866.gif

source_name: STT200C-SFT mRNA

tag: STT200C-SFT mRNA


title: STT680B-MFH

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24014.gif

source_name: CRH mRNA

tag: CRH mRNA

source_name: STT680B mRNA

tag: STT680B mRNA


title: STT741B-LEIO

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/16123.gif

source_name: STT741B mRNA

tag: STT741B mRNA


title: STT854-SS

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16490.gif

source_name: STT854 mRNA

tag: STT854 mRNA


title: STT2776-SFT

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27876.gif

source_name: STT2776-SFT mRNA

tag: STT2776-SFT mRNA


title: 129SvJ_P1input_b

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-04/60628.gif

source_name: 10X library

tag: 10X library

source_name: P1 input b

tag: P1 input b


title: 919AC - Cord

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-02/38058.gif

source_name: Human Universal Standard

tag: Human Universal Standard


title: 1101T- CTR

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-02/38067.gif


title: 129SvJ_P1input_a

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-04/60625.gif

source_name: P1 input a

tag: P1 input a


title: 129SvJ_P3_29day_spleenpool_b

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64925.gif


title: STT2770-SFT

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27872.gif

source_name: STT2770-SFT mRNA

tag: STT2770-SFT mRNA


title: 129SvJ_P3_29day_spleen2

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64918.gif


title: 129SvJ_P1_week4a_spleen

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-04/60622.gif

source_name: P1 week4a spleen

tag: P1 week4a spleen


title: STT695B-MFH

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24017.gif

source_name: STT695B mRNA

tag: STT695B mRNA


title: 129SvJ_P3_29day_spleen3

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64919.gif


title: STT2774-SFT

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27874.gif

source_name: STT2774-SFT mRNA

tag: STT2774-SFT mRNA


title: 129SvJ_P1_week4b_spleen

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-04/60621.gif

source_name: P1 week4b spleen

tag: P1 week4b spleen


title: 919AF - Fascia

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-02/38062.gif


title: 129SvJ_P3_29day_spleen1

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64917.gif


title: 129SvJ_P3_29day_spleenpool_a

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64924.gif


title: 1206C - Cord

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-02/38065.gif


title: STT1968B-Fibromatosis

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-10/31419.gif

source_name: CRH

tag: CRH

source_name: STT1968B-Fibromatosis mRNA

tag: STT1968B-Fibromatosis mRNA


title: STT3124-Fibromatosis

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-07/31135.gif

source_name: STT3124-Fibromatosis mRNA

tag: STT3124-Fibromatosis mRNA


title: 129SvJ_P3_29day_liver2

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64907.gif


title: STT3120-Fibromatosis

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-07/31130.gif

source_name: STT3120-Fibromatosis mRNA

tag: STT3120-Fibromatosis mRNA


title: 129SvJ_P3_29day_liverpool_b

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64916.gif


title: STT2772-SFT

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27873.gif

source_name: STT2772-SFT mRNA

tag: STT2772-SFT mRNA


title: STT1969B-Fibromatosis

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-10/31421.gif

source_name: STT1969B-Fibromatosis mRNA

tag: STT1969B-Fibromatosis mRNA


title: 129SvJ_P3_29day_liverpool_a

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64915.gif


title: 919BC - Cord

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-02/38063.gif


title: 1206F - Fascia

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-02/38066.gif


title: 919BF - Fascia

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-02/38064.gif


title: STT1986B-Fibromatosis

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-08/31416.gif

source_name: STT1986B-Fibromatosis mRNA

tag: STT1986B-Fibromatosis mRNA


title: STT3122-Fibromatosis

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-07/31133.gif

source_name: STT3122-Fibromatosis mRNA

tag: STT3122-Fibromatosis mRNA


title: STT3125-Fibromatosis

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-07/31137.gif

source_name: STT3125-Fibromatosis mRNA

tag: STT3125-Fibromatosis mRNA


title: STT1987B-Fibromatosis

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-10/31413.gif

source_name: STT1987B-Fibromatosis mRNA

tag: STT1987B-Fibromatosis mRNA


title: 129SvJ_P3_29day_spleen6

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64922.gif

source_name: 10X library

tag: 10X library


title: 129SvJ_P3_29day_spleen7

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64923.gif


title: STT1777B-Fibromatosis

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2002-10/31411.gif

source_name: STT1777B-Fibromatosis mRNA

tag: STT1777B-Fibromatosis mRNA


title: 129SvJ_P3_29day_liver6

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64913.gif


title: 129SvJ_P3_29day_input_c

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64904.gif


title: 129SvJ_P3_29day_liver1

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64905.gif


title: 129SvJ_P3_29day_liver7

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64914.gif


title: 129SvJ_P3_29day_spleen5

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64921.gif


title: 129SvJ_P3_29day_liver4

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64910.gif


title: 129SvJ_P3_29day_input_b

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64902.gif


title: 129SvJ_2- P.2 output

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-03/60302.gif

source_name: P.2 output (spleen pool)

tag: P.2 output (spleen pool)


title: 129SvJ_P3_29day_input_a

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64901.gif


title: 129SvJ_P3_29day_liver5

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64911.gif


title: 129SvJ_P3_29day_liver3

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64908.gif


title: 129SvJ_P3_29day_spleen4

description:
Simple annotation: Comparative genomics, mouse
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64920.gif


title: STT3782-Myxoid chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/42108.gif

source_name: CRH-mRNA

tag: CRH-mRNA

source_name: STT3782-Myxoid chondrosarcoma

tag: STT3782-Myxoid chondrosarcoma


title: STT3119-Fibromatosis

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2002-07/31127.gif

source_name: STT3119-Fibromatosis mRNA

tag: STT3119-Fibromatosis mRNA


title: STT2528(2)-Myxoid Chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/41895.gif

source_name: STT2528(2)-Myxoid Chondrosarcoma

tag: STT2528(2)-Myxoid Chondrosarcoma


title: STT3697-Myxoid Chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/41604.gif

source_name: STT3697-Myxoid Chondrosarcoma

tag: STT3697-Myxoid Chondrosarcoma


title: STT3714-Myxoid Chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/41892.gif

source_name: STT3714-Myxoid Chondrosarcoma

tag: STT3714-Myxoid Chondrosarcoma


title: 120503 - Cord

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51397.gif

source_name: Universal RNA

tag: Universal RNA

source_name: amp Sample

tag: amp Sample


title: STT3698-Myxoid Chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/41603.gif

source_name: STT3698-Myxoid Chondrosarcoma

tag: STT3698-Myxoid Chondrosarcoma


title: STT2003-Myxoid Chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/41894.gif

source_name: STT2003-Myxoid Chondrosarcoma

tag: STT2003-Myxoid Chondrosarcoma


title: STT1966-SFT

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2001-10/21044.gif

source_name: CRG mRNA

tag: CRG mRNA

source_name: STT1966 mRNA

tag: STT1966 mRNA


title: STT3699-Myxoid Chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/41602.gif

source_name: STT3699-Myxoid Chondrosarcoma

tag: STT3699-Myxoid Chondrosarcoma


title: 011604 -CTR

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51402.gif


title: STT3783-Myxoid chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/42109.gif

source_name: STT3783-Myxoid chondrosarcoma

tag: STT3783-Myxoid chondrosarcoma


title: STT3780-Myxoid chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/42042.gif

source_name: STT3780-Myxoid chondrosarcoma

tag: STT3780-Myxoid chondrosarcoma


title: STT1771-SFT

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18385.gif

source_name: STT1771 mRNA

tag: STT1771 mRNA


title: STT491-DFSP

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2001-10/21043.gif

source_name: STT491 mRNA

tag: STT491 mRNA


title: 010904B-CTR

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51401.gif


title: 120503 - Fascia

description:
Simple annotation: Diseased tissue, human tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51398.gif

source_name: universal RNA

tag: universal RNA

source_name: amp sample

tag: amp sample


title: STT1079-SFT

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15190.gif

source_name: STT1079 mRNA

tag: STT1079 mRNA


title: MCF10A MYC S2

status: Public on Mar 10 2006

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58744.gif

source_name: Stratagene reference

label_protocol: Reference RNA was reverse transcribed and labeled with Cy3-containing dendrimers using 3DNA Array900 kit (Genisphere).

tag: Stratagene reference

tag: RNA for the reference was pooled from 11 cell lines - obtained from Stratagene

source_name: MCF10A MYC S2

label_protocol: Total RNA was reverse transcribed and labeled with Cy5-containing dendrimers using 3DNA Array900 kit (Genisphere).

tag: MCF10A MYC S2


title: STT626-SFT

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15358.gif

source_name: STT675 mRNA

tag: STT675 mRNA


title: STT1169-Myxoid Chondrosarcoma

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/41893.gif

source_name: CRH-mRNA

tag: CRH-mRNA

source_name: STT1169-Myxoid Chondrosarcoma

tag: STT1169-Myxoid Chondrosarcoma


title: STT740-LEIO

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11758.gif

source_name: CRF mRNA

tag: CRF mRNA

source_name: STT 740 mRNA

tag: STT 740 mRNA


title: MCF10A GFP S3

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58743.gif

source_name: MCF10A GFP S3

tag: MCF10A GFP S3


title: STT1324-I-SS

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16480.gif

source_name: CRG mRNA

tag: CRG mRNA

source_name: STT1324-I mRNA

tag: STT1324-I mRNA


title: MCF10A CSN5 S3

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58746.gif

source_name: MCF10A CSN5 S3

tag: MCF10A CSN5 S3


title: MCF10A M+C S3

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58748.gif

source_name: MCF10A M+C S3

tag: MCF10A M+C S3


title: MCF10A M+C S2

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58747.gif

source_name: MCF10A M+C S2

tag: MCF10A M+C S2


title: MCF10A MYC S3

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58745.gif

source_name: MCF10A MYC S3

tag: MCF10A MYC S3


title: MCF10a CSN5 A1

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58368.gif

source_name: MCF10a CSN5 A1

tag: MCF10a CSN5 A1


title: MCF10A GFP S2

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58742.gif

source_name: MCF10A GFP S2

tag: MCF10A GFP S2


title: STT675-SFT

description:
Simple annotation: Primary tumor, Disease response
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15355.gif

source_name: STT626 mRNA

tag: STT626 mRNA


title: MCF10a M+C A1

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58369.gif

source_name: Stratagene reference

tag: Stratagene reference

tag: RNA for the reference was pooled from 11 cell lines - obtained from Stratagene

source_name: MCF10a M+C A1

tag: MCF10a M+C A1


title: MCF10A CSN5 S2

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58807.gif

source_name: MCF10A CSN5 S2

tag: MCF10A CSN5 S2


title: MCF10A CSN5 A2

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59320.gif

source_name: MCF10A CSN5 A2

tag: MCF10A CSN5 A2


title: MCF10a GFP A1

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58366.gif

source_name: MCF10a GFP A1

tag: MCF10a GFP A1


title: MCF10a MYC A1

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-01/58367.gif

source_name: MCF10a MYC A1

tag: MCF10a MYC A1


title: MCF10A M+C A2

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59321.gif

source_name: MCF10A M+C A2

tag: MCF10A M+C A2


title: MCF10A MYC A2

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59319.gif

source_name: MCF10A MYC A2

tag: MCF10A MYC A2


title: MCF10A GFP A2

description:
Simple annotation: Cell-line, Gene overexpression
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59318.gif

source_name: MCF10A GFP A2

tag: MCF10A GFP A2


title: OV3417_CGH

status: Public on Mar 08 2006

type: genomic

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/44816.gif

molecule: genomic DNA

source_name: XX

tag: XX


title: OV3097_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/44610.gif


title: OV3159_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/44820.gif


title: OV3546_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/44831.gif


title: OV3630_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/44824.gif


title: OV3997_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/43431.gif


title: OV3729_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-08/43876.gif


title: OV3666_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/44602.gif


title: OV3782_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/45077.gif


title: BC/FUMI04-BE

status: Public on Mar 07 2006

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-12/23208.gif

source_name: CRG

tag: CRG


title: OV2834_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/45110.gif


title: OV3654_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs//43880.gif


title: OV4641-CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-08/43532.gif


title: OV3777_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/44818.gif


title: OV3887_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/43136.gif


title: BC404A-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/6897.gif

source_name: CRD

tag: CRD


title: BC703A-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/21605.gif

source_name: CRF

tag: CRF


title: BC/FUMI27-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2002-05/28277.gif


title: BC/FUMI20-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/22195.gif


title: BC/FUMI02-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/21590.gif


title: BC601B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/21609.gif


title: OV4047_CGH

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/44815.gif


title: BC/FUMI14-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-12/23313.gif


title: BC205A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/22136.gif


title: BC/FUMI41-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28169.gif


title: BC105A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/22137.gif


title: BC/FUMI18-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24174.gif


title: BC/FUMI09-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-12/22680.gif


title: BC/FUMI43-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2002-05/28317.gif


title: BC/FUMI45-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2002-05/28276.gif


title: BC/FUMI40-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs//23516.gif


title: BC/FUMI44-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24367.gif


title: BC601A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/21607.gif


title: BC121A-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5817.gif

source_name: CR3 reference

tag: CR3 reference


title: BC/FUMI08-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/22418.gif


title: BC120B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3193.gif


title: BC119B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5807.gif


title: BC/FUMI35-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15580.gif

source_name: CRF reference

tag: CRF reference

source_name: BC/FUMI 35-AF

tag: BC/FUMI 35-AF


title: BC/FUMI27-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27268.gif


title: BC102B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/22134.gif


title: BC/FUMI25-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/24632.gif


title: BC303A-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3163.gif


title: BC706B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3262.gif

source_name: CRB1 reference

tag: CRB1 reference


title: BC/FUMI11-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/21768.gif


title: BC702A-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3192.gif


title: BC/FUMI10-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15830.gif

source_name: BC/FUMI 10-BE

tag: BC/FUMI 10-BE


title: BC/FUMI05-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15584.gif

source_name: BC/FUMI 05-AF

tag: BC/FUMI 05-AF


title: BC/FUMI06-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14673.gif

source_name: BC/FUMI 06-BE

tag: BC/FUMI 06-BE


title: BC/FUMI20-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/22194.gif


title: BC703B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/21611.gif


title: BC/FUMI35-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15579.gif

source_name: BC/FUMI 35-BE

tag: BC/FUMI 35-BE


title: BC/FUMI01-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12952.gif

source_name: BC/FUMI 01-BE

tag: BC/FUMI 01-BE


title: BC106A-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5809.gif


title: BC/FUMI05-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14620.gif

source_name: BC/FUMI 05-BE

tag: BC/FUMI 05-BE


title: BC/FUMI15-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14922.gif

source_name: BC/FUMI 15-BE

tag: BC/FUMI 15-BE


title: BC/FUMI37-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14889.gif

source_name: BC/FUMI 37-AF

tag: BC/FUMI 37-AF


title: BC/FUMI23-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14887.gif

source_name: BC/FUMI 23-BE

tag: BC/FUMI 23-BE


title: BC/FUMI17-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/16041.gif

source_name: BC/FUMI 17-AF

tag: BC/FUMI 17-AF


title: BC/FUMI39-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14890.gif

source_name: BC/FUMI 39-BE

tag: BC/FUMI 39-BE


title: BC/FUMI07-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14694.gif

source_name: BC/FUMI 07-BE

tag: BC/FUMI 07-BE


title: BC108B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3188.gif


title: BC125B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3181.gif


title: BC104B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3230.gif


title: BC405B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3211.gif


title: BC/FUMI06-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12951.gif

source_name: CRF

tag: CRF

source_name: BC/FUMI 06-AF

tag: BC/FUMI 06-AF


title: BC307A-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3219.gif


title: Ovarian Ca OV147

status: Public on Feb 25 2006

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/4006.gif

source_name: CRD Reference

tag: CRD Reference

source_name: Ovarian Ca OV147

tag: Ovarian Ca OV147


title: BC/FUMI30-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/17055.gif

source_name: BC/FUMI 30-BE

tag: BC/FUMI 30-BE


title: Ovarian Ca OV265B

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/4003.gif

source_name: Ovarian Ca OV265B

tag: Ovarian Ca OV265B


title: Ovarian Ca OV265

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/4001.gif

source_name: Ovarian Ca OV265

tag: Ovarian Ca OV265


title: Ovarian Ca OV402

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5518.gif

source_name: Ovarian Ca OV402

tag: Ovarian Ca OV402


title: Ovarian Ca OV116A

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3996.gif

source_name: Ovarian Ca OV116A

tag: Ovarian Ca OV116A


title: Ovarian Ca OV310

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5914.gif

source_name: Ovarian Ca OV413

tag: Ovarian Ca OV413


title: Ovarian Ca OV314

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4675.gif

source_name: Ovarian Ca OV314

tag: Ovarian Ca OV314


title: Ovarian Ca OV413

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4057.gif


title: Ovarian Ca OV417

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4075.gif

source_name: Ovarian Ca OV417

tag: Ovarian Ca OV417


title: BC/FUMI26-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14717.gif

source_name: CRF reference

tag: CRF reference

source_name: BC/FUMI 26-BE

tag: BC/FUMI 26-BE


title: Ovarian Ca OV25

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/4009.gif

source_name: Ovarian Ca OV25

tag: Ovarian Ca OV25


title: Ovarian Ca OV29

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4341.gif

source_name: Ovarian Ca OV29

tag: Ovarian Ca OV29


title: BC608A-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3216.gif

source_name: CR3 reference

tag: CR3 reference


title: Ovarian Ca OV411

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4071.gif

source_name: Ovarian Ca OV411

tag: Ovarian Ca OV411


title: Ovarian Ca OV269

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4344.gif

source_name: Ovarian Ca OV269

tag: Ovarian Ca OV269


title: Ovarian Ca OV297

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4307.gif

source_name: CRD Reference

tag: CRD Reference

source_name: Ovarian Ca OV297

tag: Ovarian Ca OV297


title: Ovarian Ca OV414

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3993.gif

source_name: Ovarian Ca OV414

tag: Ovarian Ca OV414


title: BC/FUMI24-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15153.gif

source_name: CRF

tag: CRF

source_name: BC/FUMI 24-BE

tag: BC/FUMI 24-BE


title: Ovarian Ca OV103

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4073.gif

source_name: Ovarian Ca OV103

tag: Ovarian Ca OV103


title: Ovarian Ca OV293

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4301.gif

source_name: Ovarian Ca OV293

tag: Ovarian Ca OV293


title: BC/FUMI22-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15915.gif

source_name: BC/FUMI 22-BE

tag: BC/FUMI 22-BE


title: BC/FUMI29-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/17024.gif

source_name: BC/FUMI 29-BE

tag: BC/FUMI 29-BE


title: Ovarian Ca OV416

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3995.gif

source_name: Ovarian Ca OV416

tag: Ovarian Ca OV416


title: Ovarian Ca OV312

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/5103.gif

source_name: Ovarian Ca OV312

tag: Ovarian Ca OV312


title: Ovarian Ca OV424

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7422.gif

source_name: Ovarian Ca OV424

tag: Ovarian Ca OV424


title: Ovarian Ca OV25C

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/4010.gif

source_name: Ovarian Ca OV25C

tag: Ovarian Ca OV25C


title: BC/FUMI16-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14755.gif

source_name: BC/FUMI 16-BE

tag: BC/FUMI 16-BE


title: BC/FUMI37-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14718.gif

source_name: CRF reference

tag: CRF reference

source_name: BC/FUMI 37-BE

tag: BC/FUMI 37-BE


title: Ovarian Ca OV308

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4337.gif

source_name: Ovarian Ca OV308

tag: Ovarian Ca OV308


title: Ovarian Ca OV98

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4065.gif

source_name: CRD Reference

tag: CRD Reference

source_name: Ovarian Ca OV98

tag: Ovarian Ca OV98


title: Ovarian Ca OV407

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11736.gif

source_name: Ovarian Ca OV407

tag: Ovarian Ca OV407


title: Ovarian Ca OV98B

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4068.gif

source_name: Ovarian Ca OV98B

tag: Ovarian Ca OV98B


title: Ovarian Ca OV410

description:
Simple annotation: Primary tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5517.gif

source_name: Ovarian Ca OV410

tag: Ovarian Ca OV410


title: BC/FUMI07-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/16039.gif

source_name: BC/FUMI 07-AF!

tag: BC/FUMI 07-AF!


title: BC/FUMI19-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15621.gif

source_name: CRF

tag: CRF

source_name: BC/FUMI 19-BE

tag: BC/FUMI 19-BE


title: Ovarian Cell Line OVCAR-4

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4678.gif

source_name: Ovarian Ca OVCAR-4

tag: Ovarian Ca OVCAR-4


title: Ovarian Cell Line OVCA_8

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4681.gif

source_name: Ovarian Ca MES-OV

tag: Ovarian Ca MES-OV


title: Ovarian Ca OV311

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4312.gif

source_name: Ovarian Ca OV311

tag: Ovarian Ca OV311


title: Ovarian Ca OV409

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3987.gif

source_name: Ovarian Ca OV409

tag: Ovarian Ca OV409


title: Ovarian Cell Line OVCA_420

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4680.gif


title: Ovarian Cell Line OVCAR-3

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4325.gif

source_name: Ovarian Ca OVCAR-3

tag: Ovarian Ca OVCAR-3


title: Ovarian Cell Line HEY

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/5102.gif

source_name: Ovarian Cell Line HEY

tag: Ovarian Cell Line HEY


title: Ovarian Cell Line ES-2

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5912.gif

source_name: Ovarian Ca OV413

tag: Ovarian Ca OV413


title: Ovarian Cell Line OVCAR-5

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4679.gif

source_name: Ovarian Ca OVCAR-5

tag: Ovarian Ca OVCAR-5


title: BC/FUMI12-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15480.gif

source_name: BC/FUMI 12-BE

tag: BC/FUMI 12-BE


title: Ovarian Cell Line OVCA429

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5910.gif

source_name: CRD Reference

tag: CRD Reference

source_name: Ovarian Cell Line OV413

tag: Ovarian Cell Line OV413


title: Ovarian Cell Line MES-OV

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4330.gif

source_name: Ovarian Cell Line MES-OV

tag: Ovarian Cell Line MES-OV


title: Ovarian Ca OV415

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3994.gif

source_name: Ovarian Ca OV415

tag: Ovarian Ca OV415


title: Ovarian Ca OV408

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4060.gif

source_name: Ovarian Ca OV408

tag: Ovarian Ca OV408


title: BC125A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5819.gif

source_name: CR3 reference

tag: CR3 reference


title: Ovarian Ca OV299

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7862.gif

source_name: Ovarian Ca OV299

tag: Ovarian Ca OV299


title: Hela Menadione/Tunicamycin 0h-3

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20396.gif

source_name: Pooled Menadione/Tunicamycin timepoints

tag: Pooled Menadione/Tunicamycin timepoints

source_name: Hela Menadione/Tunicamycin 0h-3

tag: Hela Menadione/Tunicamycin 0h-3


title: Hela Menadione 24h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20604.gif

source_name: Hela Menadione 24h

tag: Hela Menadione 24h


title: Ovarian Ca OV204

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8440.gif

source_name: Ovarian Cell Line OV204

tag: Ovarian Cell Line OV204


title: Ovarian Ca OV421

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11437.gif

source_name: Ovarian Ca OV421

tag: Ovarian Ca OV421


title: Hela Menadione 32h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20627.gif

source_name: Hela Menadione 32h

tag: Hela Menadione 32h


title: Ovarian Ca OV425

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7429.gif

source_name: Ovarian Ca OV425

tag: Ovarian Ca OV425


title: Hela Menadione/Tunicamycin 0h-2

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20390.gif

source_name: Hela Menadione/Tunicamycin 0h-2

tag: Hela Menadione/Tunicamycin 0h-2


title: Hela Tunicamycin 0.5h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/21818.gif

source_name: Hela Tunicamycin 0.5h

tag: Hela Tunicamycin 0.5h


title: Ovarian Ca OV169

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/8028.gif

source_name: Ovarian Ca OV169_shae047

tag: Ovarian Ca OV169_shae047


title: Hela Tunicamycin 36h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20296.gif

source_name: Hela Tunicamycin 36h

tag: Hela Tunicamycin 36h


title: Ovarian Ca OV18C

description:
Simple annotation: Ascites, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7858.gif

source_name: CRD Reference

tag: CRD Reference

source_name: Ovarian Ca OV18C

tag: Ovarian Ca OV18C


title: Hela Menadione 12h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-11/21812.gif

source_name: Hela Menadione 12h

tag: Hela Menadione 12h


title: Hela Tunicamycin 2h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20633.gif

source_name: Hela Tunicamycin 2h

tag: Hela Tunicamycin 2h


title: Ovarian Ca OV423_2

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/14962.gif

source_name: Ovarian Ca

tag: Ovarian Ca


title: Hela Menadione 1/2h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20634.gif

source_name: Hela Menadione 1/2h

tag: Hela Menadione 1/2h


title: Hela Menadione 1h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20599.gif

source_name: Pooled Menadione/Tunicamycin timepoints

tag: Pooled Menadione/Tunicamycin timepoints

source_name: Hela Menadione 1h

tag: Hela Menadione 1h


title: Hela Tunicamycin 12h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20294.gif

source_name: Hela Tunicamycin 12h

tag: Hela Tunicamycin 12h


title: Ovarian Ca OV1477

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4349.gif

source_name: Ovarian Ca OV1477

tag: Ovarian Ca OV1477


title: Hela Menadione/Tunicamycin 0h-1

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20383.gif

source_name: Hela Menadione/Tunicamycin 0h-1

tag: Hela Menadione/Tunicamycin 0h-1


title: Hela Menadione 8h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20603.gif

source_name: Hela Menadione 8h

tag: Hela Menadione 8h


title: Hela Menadione 4h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20601.gif

source_name: Hela Menadione 4h

tag: Hela Menadione 4h


title: BC405A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3201.gif

source_name: CR3 reference

tag: CR3 reference


title: Hela Menadione 2h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20600.gif

source_name: Hela Menadione 2h

tag: Hela Menadione 2h


title: BC106B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5813.gif


title: Ovarian Ca OV422

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7962.gif

source_name: Ovarian Ca OV422

tag: Ovarian Ca OV422


title: BC119A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5811.gif


title: Hela Tunicamycin 8h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20293.gif

source_name: Hela Tunicamycin 8h

tag: Hela Tunicamycin 8h


title: Hela Tunicamycin 4h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20636.gif

source_name: Hela Tunicamycin 4h

tag: Hela Tunicamycin 4h


title: Ovarian Ca OV75

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5349.gif

source_name: Ovarian Ca OV75

tag: Ovarian Ca OV75


title: Hela Tunicamycin 6h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20289.gif

source_name: Hela Tunicamycin 6h

tag: Hela Tunicamycin 6h


title: Hela Tunicamycin 24h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20295.gif

source_name: Hela Tunicamycin 24h

tag: Hela Tunicamycin 24h


title: Hela Tunicamycin 1h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20630.gif

source_name: Hela Tunicamycin 1h

tag: Hela Tunicamycin 1h


title: Ovarian Ca OV420

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7423.gif

source_name: CRD Reference

tag: CRD Reference

source_name: Ovarian Ca OV420

tag: Ovarian Ca OV420


title: Ovarian Ca OV151

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5348.gif

source_name: Ovarian Ca OV151

tag: Ovarian Ca OV151


title: BC-HBC6

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/5053.gif

source_name: CRD

tag: CRD


title: BC31-0

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3120.gif

source_name: CR2 reference

tag: CR2 reference


title: Ovarian Ca OV292

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7855.gif

source_name: Ovarian Ca OV292_shae048

tag: Ovarian Ca OV292_shae048


title: BC104A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3227.gif


title: BC205B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3168.gif

source_name: CRB1 reference

tag: CRB1 reference


title: Ovarian Ca OV294

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11735.gif

source_name: Ovarian Ca OV294_shae054

tag: Ovarian Ca OV294_shae054


title: BC307B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3165.gif


title: BC303B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3159.gif

source_name: CR3 reference

tag: CR3 reference


title: BC-HBC4-T1

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5150.gif


title: BC48-0

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3151.gif

source_name: BC48 T=0 has high background

tag: BC48 T=0 has high background


title: Ovarian Cell Line OVCA-432

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8442.gif

source_name: Ovarian Cell Line OVCA-432

tag: Ovarian Cell Line OVCA-432


title: Ovarian Ca OV313

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5267.gif

source_name: Ovarian Ca OV313

tag: Ovarian Ca OV313


title: Ovarian Cell Line SKOV-3

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/9560.gif

source_name: Ovarian Cell Line SKOV-3

tag: Ovarian Cell Line SKOV-3


title: BC404B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3223.gif


title: BC46-LN46

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3220.gif


title: Ovarian Ca OV107

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5296.gif

source_name: Ovarian Ca OV107

tag: Ovarian Ca OV107


title: Ovarian Cell Line IGROV-1

description:
Simple annotation: Cell-line, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/9568.gif

source_name: Ovarian Cell Line IGROV-1

tag: Ovarian Cell Line IGROV-1


title: Hela Menadione/Tunicamycin 0h-4

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-09/20631.gif

source_name: Pooled Menadione/Tunicamycin timepoints

tag: Pooled Menadione/Tunicamycin timepoints

source_name: Hela Menadione/Tunicamycin 0h-4

tag: Hela Menadione/Tunicamycin 0h-4


title: Hela DTT 2.5mM 8h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14042.gif

source_name: Pooled RNA from all red-channel time points

source_name: Hela DTT 2.5mM 8h

tag: Hela DTT 2.5mM 8h


title: Hela DTT 2.5mM 24h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14045.gif

tag: Pooled RNA from all red-channel time points

source_name: Hela DTT 2.5mM 24h

tag: Hela DTT 2.5mM 24h


title: Hela DTT 2.5mM 16h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14044.gif

source_name: Hela DTT 2.5mM 16h

tag: Hela DTT 2.5mM 16h


title: BC-HBC5

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3299.gif


title: LN50DHT10

description:
Simple annotation: prostate cancer, androgen
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2406.gif

source_name: ethanol

tag: ethanol

source_name: 10 nM DHT

tag: 10 nM DHT


title: BC704B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3255.gif

source_name: CRB1 reference

tag: CRB1 reference


title: BC108A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3183.gif


title: BC606B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3180.gif

source_name: BC606B-AF, no before sample

tag: BC606B-AF, no before sample


title: BC120A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3187.gif

source_name: CR3 reference

tag: CR3 reference


title: BC605B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3215.gif


title: Hela DTT 2.5mM 6h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14036.gif

source_name: Hela DTT 2.5mM 6h

tag: Hela DTT 2.5mM 6h


title: Hela DTT 2.5mM 4h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14035.gif

source_name: Hela DTT 2.5mM 4h

tag: Hela DTT 2.5mM 4h


title: BC40

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5292.gif


title: Ovarian Ca OVC5

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14566.gif

source_name: CRG Reference

tag: CRG Reference

source_name: Ovarian Ca OVC5_CHTN

tag: Ovarian Ca OVC5_CHTN


title: Hela DTT 2.5mM 0h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14031.gif

source_name: Hela DTT 2.5mM 0h

tag: Hela DTT 2.5mM 0h


title: Ovarian Ca OV297_1

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5678.gif

source_name: Ovarian Ca OV297

tag: Ovarian Ca OV297


title: Fibroblast Menadione 36h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28225.gif

source_name: Pooled Fibroblast Menadione timecourse mRNA

source_name: Fibroblast Menadione 36h

tag: Fibroblast Menadione 36h


title: Hela DTT 2.5mM 0.5h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14032.gif

source_name: Pooled RNA from all red-channel time points

source_name: Hela DTT 2.5mM 0.5h

tag: Hela DTT 2.5mM 0.5h


title: Hela DTT 2.5mM 2h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14034.gif

source_name: Hela DTT 2.5mM 2h

tag: Hela DTT 2.5mM 2h


title: Fibroblast Menadione 24h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28224.gif

tag: Pooled Fibroblast Menadione timecourse mRNA

source_name: Fibroblast Menadione 24h

tag: Fibroblast Menadione 24h


title: Hela DTT 2.5mM 1h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14033.gif

tag: Pooled RNA from all red-channel time points

source_name: Hela DTT 2.5mM 1h

tag: Hela DTT 2.5mM 1h


title: Fibroblast DTT 36h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27430.gif

source_name: Pooled Fibroblast DTT timecourse mRNA

tag: Pooled Fibroblast DTT timecourse mRNA

source_name: Fibroblast DTT 36h

tag: Fibroblast DTT 36h


title: Ovarian Ca OVC8

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14552.gif

source_name: Ovarian Ca OVC8_CHTN

tag: Ovarian Ca OVC8_CHTN


title: Fibroblast Menadione 8h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28222.gif

source_name: Fibroblast Menadione 8h

tag: Fibroblast Menadione 8h


title: MOLT-4 (mbp 2)

description:
Simple annotation: Polysomes, membrane-bound polysomes
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/9122.gif

source_name: Free RNA

tag: Free RNA

source_name: Membrane-bound RNA

tag: Membrane-bound RNA


title: LN43res100nM

description:
Simple annotation: prostate cancer, androgen
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16941.gif

source_name: 0.02% DMSO control

tag: 0.02% DMSO control

source_name: 100nM resveratrol

tag: 100nM resveratrol


title: Fibroblast Menadione 6h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28220.gif

source_name: Fibroblast Menadione 6h

tag: Fibroblast Menadione 6h


title: Fibroblast DTT 24h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27427.gif

source_name: Fibroblast DTT 24h

tag: Fibroblast DTT 24h


title: Fibroblast DTT 8h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27420.gif

source_name: Fibroblast DTT 8h

tag: Fibroblast DTT 8h


title: Fibroblast Menadione 12h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28223.gif

source_name: Pooled Fibroblast Menadione timecourse mRNA

source_name: Fibroblast Menadione 12h

tag: Fibroblast Menadione 12h


title: Fibroblast DTT 16h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27425.gif

source_name: Fibroblast DTT 16h

tag: Fibroblast DTT 16h


title: Fibroblast DTT 12h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27423.gif

source_name: Fibroblast DTT 12h

tag: Fibroblast DTT 12h


title: BC610A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs//7258.gif

source_name: CRD

tag: CRD


title: LN20res10

description:
Simple annotation: prostate cancer, androgen
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16349.gif

source_name: 10 microM resveratrol

tag: 10 microM resveratrol


title: Fibroblast Menadione 3h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28216.gif

tag: Pooled Fibroblast Menadione timecourse mRNA

source_name: Fibroblast Menadione 3h

tag: Fibroblast Menadione 3h


title: LN43res1

description:
Simple annotation: prostate cancer, androgen
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16872.gif

source_name: 1 microM resveratrol

tag: 1 microM resveratrol


title: Fibroblast Menadione 4h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28218.gif

source_name: Fibroblast Menadione 4h

tag: Fibroblast Menadione 4h


title: LN20Res100

description:
Simple annotation: prostate cancer, androgen
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16364.gif

source_name: DMSO 0.02% control

tag: DMSO 0.02% control

source_name: 100 microM resveratrol

tag: 100 microM resveratrol


title: Fibroblast DTT 6h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27417.gif

source_name: Pooled Fibroblast DTT timecourse mRNA

tag: Pooled Fibroblast DTT timecourse mRNA

source_name: Fibroblast DTT 6h

tag: Fibroblast DTT 6h


title: LN20res40

description:
Simple annotation: prostate cancer, androgen
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16348.gif

source_name: DMSO control 0.02%

tag: DMSO control 0.02%

source_name: 40 microM resveratrol

tag: 40 microM resveratrol


title: Hela Heat 42 degrees 24h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11942.gif

source_name: Unsynchronized Hela in DMEM

tag: Unsynchronized Hela in DMEM

source_name: Hela Heat 42degrees 24h

tag: Hela Heat 42degrees 24h


title: Hela DTT 2.5mM 30h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14046.gif

source_name: Pooled RNA from all red-channel time points

source_name: Hela DTT 2.5mM 30h

tag: Hela DTT 2.5mM 30h


title: Hela Heat 42 degrees 8h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11941.gif

source_name: Hela Heat 42degrees 8h

tag: Hela Heat 42degrees 8h


title: BC713A-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/7092.gif


title: Fibroblast Menadione 0.5h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28214.gif

source_name: Pooled Fibroblast Menadione timecourse mRNA

source_name: Fibroblast Menadione 0.5h

tag: Fibroblast Menadione 0.5h


title: Hela Heat 42 degrees 6h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11940.gif

source_name: Hela Heat 42degrees 6h

tag: Hela Heat 42degrees 6h


title: Fibroblast DTT 3h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27411.gif

source_name: Fibroblast DTT 3h

tag: Fibroblast DTT 3h


title: Fibroblast DTT 4h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27414.gif

source_name: Fibroblast DTT 4h

tag: Fibroblast DTT 4h


title: Hela Heat 42 degrees 4h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11939.gif

source_name: Hela Heat 42degrees 4h

tag: Hela Heat 42degrees 4h


title: BC210B-AF

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs//7257.gif

source_name: CRD

tag: CRD


title: Fibroblast Menadione 1h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28215.gif

tag: Pooled Fibroblast Menadione timecourse mRNA

source_name: Fibroblast Menadione 1h

tag: Fibroblast Menadione 1h


title: Fibroblast Menadione 0h #4

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28213.gif

source_name: Fibroblast Menadione 0h #4

tag: Fibroblast Menadione 0h #4


title: Fibroblast Menadione 0h #1

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28210.gif

source_name: Fibroblast Menadione 0h #1

tag: Fibroblast Menadione 0h #1


title: Fibroblast Menadione 0h #3

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28212.gif

source_name: Fibroblast Menadione 0h #3

tag: Fibroblast Menadione 0h #3


title: LN43res10nM

description:
Simple annotation: prostate cancer, androgen
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16857.gif

source_name: 0.02% DMSO control

tag: 0.02% DMSO control

source_name: 10 nM resveratrol

tag: 10 nM resveratrol


title: Fibroblast Crowding 3D

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25229.gif

source_name: Asynchronous Fibroblast

tag: Asynchronous Fibroblast

source_name: Fibroblast Crowding 3D

tag: Fibroblast Crowding 3D


title: BC406A-2ndTUMOR

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs//7134.gif


title: BC201B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5540.gif


title: BC503B-BE

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5652.gif


title: Fibroblast DTT 0h #3

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27397.gif

source_name: Pooled Fibroblast DTT timecourse mRNA

tag: Pooled Fibroblast DTT timecourse mRNA

source_name: Fibroblast DTT 0h #3

tag: Fibroblast DTT 0h #3


title: BC-HBC2

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5542.gif


title: Hela H2O2 300mM 6h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13538.gif

source_name: Pooled RNA from all red-channel time points

source_name: Hela H2O2 300mM 6h

tag: Hela H2O2 300mM 6h


title: Fibroblast Menadione 0h #2

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28211.gif

source_name: Pooled Fibroblast Menadione timecourse mRNA

source_name: Fibroblast Menadione 0h #2

tag: Fibroblast Menadione 0h #2


title: Fibroblast DTT 2h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27408.gif

source_name: Fibroblast DTT 2h

tag: Fibroblast DTT 2h


title: Fibroblast DTT 1h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27406.gif

source_name: Fibroblast DTT 1h

tag: Fibroblast DTT 1h


title: Hela H2O2 300mM 8h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13539.gif

tag: Pooled RNA from all red-channel time points

source_name: Hela H2O2 300mM 8h

tag: Hela H2O2 300mM 8h


title: Hela H2O2 300mM 2h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13535.gif

source_name: Hela H2O2 300mM 2h

tag: Hela H2O2 300mM 2h


title: Hela Heat 42 degrees 1h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11930.gif

source_name: Unsynchronized Hela in DMEM

tag: Unsynchronized Hela in DMEM

source_name: Hela Heat 42degrees 1h

tag: Hela Heat 42degrees 1h


title: Hela Heat 42 degrees 3h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11938.gif

source_name: Hela Heat 42degrees 3h

tag: Hela Heat 42degrees 3h


title: Hela H2O2 300mM 16h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13541.gif

source_name: Hela H2O2 300mM 16h

tag: Hela H2O2 300mM 16h


title: Fibroblast DTT 0.5h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27403.gif

source_name: Fibroblast DTT 0.5h

tag: Fibroblast DTT 0.5h


title: Fibroblast Crowding 2D

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25228.gif

source_name: Asynchronous Fibroblast

source_name: Fibroblast Crowding 2D

tag: Fibroblast Crowding 2D


title: Ovarian Ca OV34

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13899.gif

source_name: CRG Reference

tag: CRG Reference

source_name: Ovarian Ca OV34_CHTN

tag: Ovarian Ca OV34_CHTN


title: Fibroblast Heat 16h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25225.gif

tag: Asynchronous Fibroblast

source_name: Fibroblast Heat 16h

tag: Fibroblast Heat 16h


title: Fibroblast DTT 0h #2

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27393.gif

source_name: Pooled Fibroblast DTT timecourse mRNA

tag: Pooled Fibroblast DTT timecourse mRNA

source_name: Fibroblast DTT 0h #2

tag: Fibroblast DTT 0h #2


title: Ovarian Ca OV43

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13908.gif

source_name: Ovarian Ca OV43_CHTN

tag: Ovarian Ca OV43_CHTN


title: Fibroblast DTT 0h #4

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27399.gif

source_name: Fibroblast DTT 0h #4

tag: Fibroblast DTT 0h #4


title: STT3122-Fibromatosis-total RNA

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-11/57629.gif

source_name: UHR

tag: UHR

source_name: STT3122-Fibromatosis-total RNA

tag: STT3122-Fibromatosis-total RNA


title: Fibroblast Heat 10h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25223.gif

source_name: Fibroblast Heat 10h

tag: Fibroblast Heat 10h


title: Hela Heat 42 degrees 0h (2)

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/12142.gif

source_name: Unsynchronized Hela in DMEM

tag: Unsynchronized Hela in DMEM

source_name: Hela Heat 42 degrees 0h (2)

tag: Hela Heat 42 degrees 0h (2)


title: Hela Heat 42 degrees 0h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11926.gif

source_name: Hela Heat 42degrees 0h

tag: Hela Heat 42degrees 0h


title: Hela Crowding 7d

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10314.gif

source_name: Hela Crowding 7d

tag: Hela Crowding 7d


title: STT3120-Fibromatosis-total RNA

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-11/57627.gif

source_name: STT3120-Fibromatosis-total RNA

tag: STT3120-Fibromatosis-total RNA


title: Fibroblast DTT 0h #1

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/27390.gif

source_name: Fibroblast DTT 0h #1

tag: Fibroblast DTT 0h #1


title: Fibroblast Heat 4h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25220.gif

source_name: Asynchronous Fibroblast

source_name: Fibroblast Heat 4h

tag: Fibroblast Heat 4h


title: Hela H2O2 300mM 30h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13556.gif

source_name: Pooled RNA from all red-channel time points

source_name: Hela H2O2 300mM 30h

tag: Hela H2O2 300mM 30h


title: Ovarian Ca OV63

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13907.gif

source_name: CRG Reference

tag: CRG Reference

source_name: Ovarian Ca OV63_CHTN

tag: Ovarian Ca OV63_CHTN


title: Fibroblast Heat 0.5h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25217.gif

tag: Asynchronous Fibroblast

source_name: Fibroblast Heat 0.5h

tag: Fibroblast Heat 0.5h


title: Fibroblast Heat 1h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25218.gif

source_name: Fibroblast Heat 1h

tag: Fibroblast Heat 1h


title: T1 14h 150uM Resv LN

description:
Simple annotation: prostate cancer, Chemoprevention
Image: http://smd.stanford.edu/MicroArray/gifs/2002-05/28278.gif

source_name: DMSO

tag: DMSO

source_name: 14h 150uM resveratrol

tag: 14h 150uM resveratrol


title: Ovarian Ca OV282

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15416.gif

source_name: Ovarian Ca OV282_NORWAY

tag: Ovarian Ca OV282_NORWAY


title: STT2774-SFT-total RNA

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-11/57626.gif

source_name: UHR

tag: UHR

source_name: STT2774-SFT-total RNA

tag: STT2774-SFT-total RNA


title: Hela Crowding 0d

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10313.gif

source_name: Unsynchronized Hela in DMEM

tag: Unsynchronized Hela in DMEM

source_name: Hela Crowding 0d

tag: Hela Crowding 0d


title: T1 24h 150uM Resv LN

description:
Simple annotation: prostate cancer, Chemoprevention
Image: http://smd.stanford.edu/MicroArray/gifs/2002-05/28283.gif

source_name: 24h 150uM resveratrol LNCaP

tag: 24h 150uM resveratrol LNCaP


title: Hela H2O2 300mM 24h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2001-02/13553.gif

tag: Pooled RNA from all red-channel time points

source_name: Hela H2O2 300mM 24h

tag: Hela H2O2 300mM 24h


title: Fibroblast Heat 2h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25219.gif

source_name: Asynchronous Fibroblast

source_name: Fibroblast Heat 2h

tag: Fibroblast Heat 2h


title: Fibroblast Heat 0_2

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25216.gif

source_name: Fibroblast Heat 0_2

tag: Fibroblast Heat 0_2


title: Ovarian Ca OV11

description:
Simple annotation: Solid tumor, Ovarian
Image: http://smd.stanford.edu/MicroArray/gifs/2002-01/23702.gif

tag: CRG Reference

source_name: Ovarian Ca OV11

tag: Ovarian Ca OV11


title: T1 22h 150uM Resv LN

description:
Simple annotation: prostate cancer, Chemoprevention
Image: http://smd.stanford.edu/MicroArray/gifs/2002-05/28282.gif

source_name: 22h 150uM resveratrol LNCaP

tag: 22h 150uM resveratrol LNCaP


title: STT3119-Fibromatosis-total RNA

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-11/57618.gif

source_name: STT3119-Fibromatosis-total RNA

tag: STT3119-Fibromatosis-total RNA


title: Hela Crowding 6d

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs//10310.gif

source_name: Hela Crowding 6d

tag: Hela Crowding 6d


title: Fibroblast Heat 24h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25226.gif

tag: Asynchronous Fibroblast

source_name: Fibroblast Heat 24h

tag: Fibroblast Heat 24h


title: Fibroblast Heat 0_1

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25215.gif

source_name: Fibroblast Heat 0_1

tag: Fibroblast Heat 0_1


title: T1 18h 150uM Resv LN

description:
Simple annotation: prostate cancer, Chemoprevention
Image: http://smd.stanford.edu/MicroArray/gifs/2002-05/28280.gif

source_name: DMSO

tag: DMSO

source_name: 18h 150uM resveratrol

tag: 18h 150uM resveratrol


title: Fibroblast Crowding 1D

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2002-02/25227.gif

source_name: Fibroblast Crowding 1D

tag: Fibroblast Crowding 1D


title: Hela Heat 42 degrees 2h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11937.gif

tag: Unsynchronized Hela in DMEM

source_name: Hela Heat 42degrees 2h

tag: Hela Heat 42degrees 2h


title: BC-HBC3

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5547.gif

source_name: CRD

tag: CRD


title: STT1637-SFT-total RNA

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-11/57625.gif

source_name: UHR

tag: UHR

source_name: STT1637-SFT-total RNA

tag: STT1637-SFT-total RNA


title: Hela Crowding 2d

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10307.gif

source_name: Unsynchronized Hela in DMEM

source_name: Hela Crowding 2d

tag: Hela Crowding 2d


title: Hela Heat 42 degrees 0.5h

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11928.gif

source_name: Hela Heat 42degrees 0.5h

tag: Hela Heat 42degrees 0.5h


title: STT1079-SFT-total RNA

description:
Simple annotation: Primary tumor, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2004-11/57615.gif

source_name: STT1079-SFT-total RNA

tag: STT1079-SFT-total RNA


title: Hela Crowding 1d

description:
Simple annotation: Stress, cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10306.gif

source_name: Hela Crowding 1d

tag: Hela Crowding 1d