title: MHY1 (crt1) vs. CRY1 (wild type) - log phase

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/984.gif

source_name: CRY1 (wild type)

tag: CRY1 (wild type)

source_name: MHY1 (crt1)

tag: MHY1 (crt1)


title: DES459 (mec1) - log phase (MMS time = 0 sample)

status: Public on Sep 24 2005

type: RNA

city: Stanford

last: Stanford Microarray Database

state: CA

address: 300 Pasteur Drive

department: Stanford University, School of Medicine

country: USA

institute: Stanford Microarray Database (SMD)

description:
Simple annotation: Stress, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7542.gif

data_processing: VALUE is Log (base 2) of the ratio of the mean of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

molecule: total RNA

organism: Saccharomyces cerevisiae

source_name: DES460 (wt) - log phase (MMS time = 0 sample)


title: wt_plus_gamma_90_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/982.gif


title: DES459 (mec1-) + 0.02% MMS - 120 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/8525.gif

source_name: time = 0 min

tag: time = 0 min

source_name: time = 120 min

tag: time = 120 min


title: SIR3C IP, JRY4013, OD= 0.6, SIR Experiment 4

type: genomic

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6425.gif

molecule: genomic DNA

source_name: Sonicated s288C Genomic DNA, Amplified 03-20-00

source_name: IP-Enriched DNA, Amplified

tag: IP-Enriched DNA, Amplified


title: DES459 (mec1) - log phase (IR time = 0 sample)

description:
Simple annotation: Stress, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7541.gif

source_name: DES460 (wt) - log phase (IR time = 0 sample)


title: wt_plus_gamma_120_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/983.gif


title: wt_plus_gamma_60_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/981.gif


title: DES459 (mec1-) + 0.02% MMS - 45 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/8522.gif

source_name: time = 45 min

tag: time = 45 min


title: Mock IP(No Ab), S288C, OD= 0.6, RAP1 Experiment 6

description:
Simple annotation: Chromatin IP, IP Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3725.gif

tag: Sonicated s288C Genomic DNA, Amplified 03-20-00


title: RAP1C IP, S288C, OD= 0.6, Experiment 9

description:
Simple annotation: Chromatin IP, RAP1
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3724.gif


title: pRS-ROX1 GAL media

description:
Simple annotation: Stress, Heat-shock
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7540.gif

source_name: pRS416 - GAL media

tag: pRS416 - GAL media

source_name: pRS-ROX1 GAL media

tag: pRS-ROX1 GAL media


title: Mock IP(No Ab), S288C, OD= 0.6, RAP1 Experiment 7

description:
Simple annotation: Chromatin IP, IP Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3727.gif


title: Mock IP(No Target), S288C, OD= 0.6, RAP1 Experiment 9, Rb anti-HA

description:
Simple annotation: Chromatin IP, IP Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3732.gif


title: wt_plus_gamma_45_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/980.gif


title: SIR1C IP, JRY4621 (SIR1 deletion), OD= 0.6, SIR Experiment 3

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6428.gif


title: DES459 (mec1-) + 0.02% MMS - 60 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/8523.gif

source_name: time = 60 min

tag: time = 60 min


title: MHY1 (crt1) vs CRY1 (wild type)

description:
Simple annotation: Stress, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5187.gif

source_name: CRY1 - log phase

tag: CRY1 - log phase

source_name: MHY1 - log phase

tag: MHY1 - log phase


title: DES460 + 0.02% MMS - 15 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6349.gif

source_name: time = 15 min

tag: time = 15 min


title: DES459 (mec1-) + 0.02% MMS - 30 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6439.gif

source_name: time = 30 min

tag: time = 30 min


title: Mock IP(No Ab), S288C, OD= 26 (3 Days) Stationary Culture #4

description:
Simple annotation: Chromatin IP, IP Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/7037.gif


title: RAP1C IP, S288C, OD= 0.6, Experiment 8

description:
Simple annotation: Chromatin IP, RAP1
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3731.gif


title: RAP1C IP, S288C, OD= 0.6, 27 degrees

description:
Simple annotation: Chromatin IP, RAP1
Image: http://smd.stanford.edu/MicroArray/gifs/1999-12/1319.gif

source_name: Sonicated Genomic DNA, Amplified

tag: Sonicated Genomic DNA, Amplified

source_name: IP-enriched DNA, Amplified

tag: IP-enriched DNA, Amplified


title: Mock IP(No Target), S288C, OD=1, HA.11 Abs, 08/02/99

description:
Simple annotation: Chromatin IP, IP Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3286.gif

source_name: Sonicated S288C Genomic DNA, Amplified

tag: Sonicated S288C Genomic DNA, Amplified


title: DES460(wt) vs. DES459(mec1) genomic DNA comparison

description:
Simple annotation: Genomic DNA, DNA.ch.pt
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/9842.gif

source_name: DES460 (wt)

tag: DES460 (wt)


title: SIR4N IP, JRY4013, OD= 0.6, SIR Experiment 4

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6426.gif


title: mec1_plus_gamma_90_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-11/1255.gif


title: mec1_plus_gamma_120_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-11/1257.gif


title: DES459 (mec1-) + 0.02% MMS - 15 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6364.gif

source_name: time = 0 min


title: DES460 (wt) - mock irradiation - 30 min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5239.gif

source_name: DES460 - asynchronous

tag: DES460 - asynchronous

source_name: mock irradiated - 30 min

tag: mock irradiated - 30 min


title: SIR2C IP, S288C, OD=1, SIR Experiment 2

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3269.gif

source_name: Sonicated s288C Genomic DNA, Amplified

tag: Sonicated s288C Genomic DNA, Amplified

source_name: IP-Enriched DNA, Amplified


title: DES460 + 0.02% MMS - 120 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/8520.gif

tag: time = 0 min

source_name: time = 120 min

tag: time = 120 min


title: mec1_plus_gamma_60_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-11/1254.gif


title: mec1_plus_gamma_45_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-11/1253.gif


title: DES460(wt) vs. DES459(mec1) genomic DNA comparison #2

description:
Simple annotation: Genomic DNA, DNA.ch.pt
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/9844.gif


title: DES460 (wt) - mock irradiation - 5 min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5237.gif

source_name: mock irradiated - 5 min

tag: mock irradiated - 5 min


title: DES459 (mec1) + heat 20 min

description:
Simple annotation: Stress, Heat-shock
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/811.gif

source_name: time = 0 min (at 30 degrees)

tag: time = 0 min (at 30 degrees)

source_name: time = 20 min (at 37 degrees)

tag: time = 20 min (at 37 degrees)


title: MHY1 (dun1) + heat 20 min

description:
Simple annotation: Stress, Heat-shock
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/813.gif


title: DES460 (wild type) + heat 20 min

description:
Simple annotation: Stress, Heat-shock
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/810.gif


title: SIR3C IP, JRY4603 (SIR3 deletion), YPD, OD= 0.6, Experiment 3

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/7013.gif

source_name: Sonicated s288C Genomic DNA, Amplified 03-20-00

tag: IP-Enriched DNA, Amplified


title: mec1_plus_gamma_30_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-11/1252.gif


title: SIR4C IP, S288C, OD= 1, SIR Experiment 2

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3276.gif


title: DES459 (mec1) - mock irradiation - 30 min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5245.gif

source_name: DES459 - asynchronous

tag: DES459 - asynchronous


title: DES460 + 0.02% MMS - 90 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6358.gif

source_name: time = 90 min

tag: time = 90 min


title: mec1_plus_gamma_10_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-11/1250.gif


title: SIR3C IP, S288C, OD= 1, SIR Experiment 2

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3274.gif


title: mec1_plus_gamma_20_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-11/1251.gif


title: wt_plus_gamma_30_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/979.gif


title: SIR4C IP, JRY4578 (SIR4 deletion), OD= 0.6, SIR Experiment 3

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/7016.gif

tag: Sonicated s288C Genomic DNA, Amplified 03-20-00


title: DES460 + 0.02% MMS - 60 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6357.gif

source_name: time = 60 min

tag: time = 60 min


title: wt_plus_gamma_5_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/976.gif


title: DES460 vs. DES460 YPD log phase control

description:
Simple annotation: Yeast expression, Control experiment
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16338.gif


title: DES460 + 0.2% MMS - 45 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6354.gif

source_name: time = 45 min

tag: time = 45 min


title: DES459 (mec1) - mock irradiation - 60 min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5246.gif

source_name: mock irradiated - 60 min

tag: mock irradiated - 60 min


title: SIR4N IP, JRY4013, OD= 0.6, SIR Experiment 3

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/6487.gif


title: wt_plus_gamma_10_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/977.gif


title: DES460 (wt) - mock irradiation - 90 min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5242.gif

source_name: mock irradiated - 90 min

tag: mock irradiated - 90 min


title: SIR2C IP, JRY4563 (SIR2 deletion), OD= 0.6, SIR Experiment 3

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/7004.gif


title: Mock IP(No Ab), S288C, OD= 12 (1 Day) Stationary Culture #3

description:
Simple annotation: Chromatin IP, IP Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/7003.gif


title: DES460 (wt) - mock irradiation - 60 min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5240.gif


title: DES459 (mec1) - mock irradiation -15 min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5244.gif

source_name: mock irradiated - 15 min

tag: mock irradiated - 15 min


title: SIR2C IP, JRY4013, OD= 0.6, SIR Experiment 3

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/6478.gif


title: DES459 (mec1) - mock irradiation - 5 min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5243.gif


title: SIR3C IP, JRY4013, OD= 0.6, SIR Experiment 3

description:
Simple annotation: Chromatin IP, SIR Proteins
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/6486.gif


title: RAP1C IP, S288C, OD= 0.6, Experiment 7

description:
Simple annotation: Chromatin IP, RAP1
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3785.gif


title: DES460 + 0.02% MMS - 30 min

description:
Simple annotation: DNA damage, MMS
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6351.gif

source_name: time = 0 min

source_name: time = 30 min

tag: time = 30 min


title: wt_plus_gamma_20_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-10/978.gif


title: mec1_plus_gamma_5_min

description:
Simple annotation: DNA damage, Gamma radiation
Image: http://smd.stanford.edu/MicroArray/gifs/1999-11/1249.gif


title: DES genomic DNA vs. MHY26 (dun1) genomic DNA (correct version)

description:
Simple annotation: Yeast expression, Control experiment
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16514.gif

source_name: DES460 (wt) genomic DNA

tag: DES460 (wt) genomic DNA

source_name: MHY1 (dun1) genomic DNA

tag: MHY1 (dun1) genomic DNA


title: MCF-10A.

status: Public on Sep 23 2005

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4986.gif

organism: Homo sapiens

source_name: CRD

tag: CRD


title: Hs578T-NCI.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2223.gif

source_name: CR1 reference

tag: CR1 reference

source_name: Hs578T reference sample

tag: Hs578T reference sample


title: HFF infected with PDS tachyzoites 14 hours duplicate #1

description:
Simple annotation: Toxoplasma, Reproducibility
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5379.gif

source_name: infected

tag: infected

source_name: uninfected

tag: uninfected


title: HFF were treated with 1.45x107 toxo in a transwell  plate

description:
Simple annotation: Toxoplasma, Condition media
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10531.gif

source_name: Infected

tag: Infected

source_name: Uninfected

tag: Uninfected


title: 184Aa.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3131.gif


title: HFF were treated with 1.45x108toxo in a transwell  plate

description:
Simple annotation: Toxoplasma, Condition media
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10530.gif


title: BT-474/ATCC.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2213.gif


title: BT-549.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2242.gif


title: Hs578T-ATCC.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7410.gif

source_name: CRE reference

tag: CRE reference


title: HFF infected with PDS tachyzoites in the presence of cycloheximide

description:
Simple annotation: Toxoplasma, cycloheximide
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6274.gif


title: 184A1-LATE.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/3104.gif


title: T47D.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2275.gif


title: HMEC-C Confluent.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2284.gif

source_name: HMEC-C Confluent

tag: HMEC-C Confluent


title: HFF infected with PDS tachyzoites 14 hours duplicate #2

description:
Simple annotation: Toxoplasma, Reproducibility
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5380.gif


title: HFF were treated with PDS tachyzoites for 4 hours to be used with hd092-093 transwellxpts.

description:
Simple annotation: Toxoplasma, Condition media
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10532.gif


title: HMEC-C.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2207.gif

source_name: HMEC-C

tag: HMEC-C


title: HFF RNA spiked with 20% Toxo RNA

description:
Simple annotation: Toxoplasma, Control experiment
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7517.gif

source_name: HFF + Toxo RNA

tag: HFF + Toxo RNA

source_name: HFF only

tag: HFF only


title: HFF infected with PDS tacyzoites 24 hour

description:
Simple annotation: Toxoplasma, Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5723.gif


title: HFF infected with HFF cell debris 24 hours

description:
Simple annotation: Toxoplasma, Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5722.gif


title: MDA-MB-231-NCI.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2272.gif


title: BJ+hTERT PD210/Fibroblasts-UTSW.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12697.gif

source_name: CRF reference

tag: CRF reference

source_name: BJ+hTERT PD210

tag: BJ+hTERT PD210


title: HMEC-C+IFNalpha.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2273.gif

source_name: HMEC-C+IFNalpha 24hours

tag: HMEC-C+IFNalpha 24hours


title: Normal labelling expt

description:
Simple annotation: Toxoplasma, Controls
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5874.gif


title: HB2.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-06/6920.gif

source_name: CRD reference

tag: CRD reference


title: Reverse labelling expt.

description:
Simple annotation: Toxoplasma, Reproducibility
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/5878.gif


title: HFF infected with PDS tachyzoites in the absence of cycloheximide

description:
Simple annotation: Toxoplasma, cycloheximide
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6273.gif


title: SK-BR-3.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2210.gif

source_name: CR2 reference

tag: CR2 reference


title: HFF infected with PDS tachyzoites 4 hour

description:
Simple annotation: Toxoplasma, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3946.gif


title: HFF infected with PDS tachyzoites 6 hour

description:
Simple annotation: Toxoplasma, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3948.gif


title: HFF infected with PDS tachyzoites 24 hour

description:
Simple annotation: Toxoplasma, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3950.gif


title: HFF infected with PDS tachyzoites 2 hour

description:
Simple annotation: Toxoplasma, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3937.gif


title: MCF7-NCI.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2163.gif

source_name: MCF7-NCI reference sample

tag: MCF7-NCI reference sample


title: 184B5.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3138.gif


title: HFF infected with PDS tachyzoites 1 hour

description:
Simple annotation: Toxoplasma, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3932.gif


title: HCC-1937.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs//7320.gif


title: BT474-Stanford.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7727.gif

source_name: BT474 48 hour control

tag: BT474 48 hour control


title: HMS32.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-07/7907.gif


title: MDA-MB-231-UTSW.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8346.gif


title: HME31.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11619.gif


title: MCF-12A.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10925.gif


title: MCF7-UCLA.

description:
Simple annotation: Cell-line, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11564.gif


title: LTvSTds

status: Public on Sep 17 2005

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50568.gif

data_processing: VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

organism: Mus musculus

source_name: ST

tag: ST

source_name: LT

tag: LT


title: STvs MPPds

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50579.gif

source_name: MPP

tag: MPP


title: ST vs MPP

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50581.gif


title: LT v MPP ds 42K1

description:
Simple annotation: Hematopoiesis, stem cells
Image: http://smd.stanford.edu/MicroArray/gifs/2003-12/47806.gif


title: LTvsMPPds

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50576.gif


title: LTvsST

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50569.gif


title: 4578LTvST

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49083.gif


title: LTvsMPP

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50575.gif


title: STvs MPP ds

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50580.gif


title: LT v MPP 42K1

description:
Simple annotation: Hematopoiesis, stem cells
Image: http://smd.stanford.edu/MicroArray/gifs/2003-12/47805.gif


title: 4579LTvST

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49084.gif


title: 4582_STvMPP

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49086.gif


title: Time 2hr + gamma + Pt Ab

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45498.gif

source_name: Stratagene 1 Round Amplification 4 ug

tag: Stratagene 1 Round Amplification 4 ug

source_name: PBMC Time 2hr + gamma + Pt Ab

tag: PBMC Time 2hr + gamma + Pt Ab


title: LTvs MPPds

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50577.gif


title: LTvST

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50566.gif


title: LTvMPP

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50567.gif


title: Time 2hr + gamma

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45497.gif

source_name: PBMC Time 2hr + gamma

tag: PBMC Time 2hr + gamma


title: Time 2hr + gamma + Non-specific Ab

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45499.gif

source_name: PBMC Time 2hr + gamma + Non-specific Ab

tag: PBMC Time 2hr + gamma + Non-specific Ab


title: Time 21hr + gamma + Non-specific Ab

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45507.gif

source_name: PBMC Time 21hr + gamma + Non-specific Ab


title: Time 6hr + gamma

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45501.gif

source_name: PBMC Time 6hr + gamma

tag: PBMC Time 6hr + gamma


title: Time 21hr + gamma + Pt Ab

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45506.gif

source_name: PBMC Time 21hr + gamma + Pt Ab

tag: PBMC Time 21hr + gamma + Pt Ab


title: LTvsSTds

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50570.gif


title: Time 6hr nothing

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45500.gif

source_name: PBMC Time 6hr nothing

tag: PBMC Time 6hr nothing


title: Time 0hr nothing

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45491.gif

source_name: PBMC Time 0hr nothing

tag: PBMC Time 0hr nothing


title: Time 0hr + gamma + Non-specific Ab

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45495.gif

source_name: PBMC Time 0hr + gamma + Non-specific Ab

tag: PBMC Time 0hr + gamma + Non-specific Ab


title: BC-A

status: Public on Sep 10 2005

description:
Simple annotation: Primary tumor, Breast
Image: http://smd.stanford.edu/MicroArray/gifs/2000-02/2278.gif

source_name: BC-A normal

tag: BC-A normal


title: Time 21hr + gamma

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45505.gif

source_name: PBMC Time 21hr + gamma

tag: PBMC Time 21hr + gamma


title: STvs MPP

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50578.gif


title: Time 0hr + gamma

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45492.gif

source_name: PBMC Time 0hr + gamma

tag: PBMC Time 0hr + gamma


title: WT_TC_E_8-9h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16388.gif

organism: Drosophila melanogaster

source_name: WT TC reference

tag: WT TC reference

source_name: 8-9h Embryo N=2

tag: 8-9h Embryo N=2


title: WT_TC_E_15-16h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16384.gif

source_name: 15-16h Embryo N=2

tag: 15-16h Embryo N=2


title: Time 21hr nothing

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45504.gif

source_name: PBMC Time 21hr nothing

tag: PBMC Time 21hr nothing


title: WT_TC_E_16-17h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16386.gif

source_name: 16-17h Embryo N=2

tag: 16-17h Embryo N=2


title: 4583_STvMPP

description:
Simple annotation: Hematopoiesis, development
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49087.gif

source_name: ST

tag: ST

source_name: MPP

tag: MPP


title: WT_TC_E_17-18h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16387.gif

source_name: 17-18h Embryo N=2

tag: 17-18h Embryo N=2


title: WT_TC_E_6-7h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16383.gif

source_name: 6-7h Embryo N=2

tag: 6-7h Embryo N=2


title: Time 6hr + gamma + Pt Ab

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45502.gif

source_name: Stratagene 1 Round Amplification 4 ug

tag: Stratagene 1 Round Amplification 4 ug

source_name: PBMC Time 6hr + gamma + Pt Ab

tag: PBMC Time 6hr + gamma + Pt Ab


title: Time 2hr nothing

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45496.gif

source_name: PBMC Time 2hr nothing

tag: PBMC Time 2hr nothing


title: WT_TC_E_7-8h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16385.gif

source_name: 7-8h Embryo N=2

tag: 7-8h Embryo N=2


title: WT_TC_E_1.5-2.5h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16378.gif


title: WT_TC_E_14-15h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16382.gif

source_name: 14-15h Embryo N=2

tag: 14-15h Embryo N=2


title: Time 0hr + gamma + Pt Ab

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45493.gif

source_name: PBMC Time 0hr + gamma + Pt Ab

tag: PBMC Time 0hr + gamma + Pt Ab


title: WT_TC_E_1-2h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16377.gif

source_name: 1-2h Embryo N=2

tag: 1-2h Embryo N=2


title: WT_TC_E_5-6h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16379.gif

source_name: 5-6h Embryo N=2

tag: 5-6h Embryo N=2


title: Time 6hr + gamma + Non-specific Ab

description:
Simple annotation: Infection, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45503.gif

source_name: PBMC Time 6hr + gamma + Non-specific Ab

tag: PBMC Time 6hr + gamma + Non-specific Ab


title: WT_TC_A_0-24(F_TUD)h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16441.gif

source_name: WT TC reference

tag: WT TC reference

source_name: 0-24(F_TUD)h Adult N=2

tag: 0-24(F_TUD)h Adult N=2


title: WT_TC_E_5.5-6.5h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16381.gif


title: WT_TC_E_8-9h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16375.gif

source_name: 8-9h Embryo N=1

tag: 8-9h Embryo N=1


title: WT_TC_A_25(F)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16438.gif

source_name: 25(F)d Adult N=2

tag: 25(F)d Adult N=2


title: WT_TC_A_05(F_TUD)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16442.gif

source_name: 05(F_TUD)d Adult N=2

tag: 05(F_TUD)d Adult N=2


title: WT_TC_A_30(F)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16440.gif

source_name: 30(F)d Adult N=2

tag: 30(F)d Adult N=2


title: WT_TC_A_0-24(F)h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16431.gif

source_name: 0-24(F)h Adult N=2

tag: 0-24(F)h Adult N=2


title: WT_TC_M_96h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16430.gif

source_name: 96h Metamorph N=2

tag: 96h Metamorph N=2


title: WT_TC_E_5.5-6.5h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16374.gif


title: WT_TC_A_15(F)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16434.gif

source_name: 15(F)d Adult N=2

tag: 15(F)d Adult N=2


title: WT_TC_A_0-24(M)h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16416.gif

source_name: 0-24(M)h Adult N=2

tag: 0-24(M)h Adult N=2


title: WT_TC_A_05(F)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16433.gif

source_name: 05(F)d Adult N=2

tag: 05(F)d Adult N=2


title: WT_TC_M_30h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16422.gif

source_name: 30h Metamorph N=2

tag: 30h Metamorph N=2


title: WT_TC_M_10h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16415.gif

source_name: 10h Metamorph N=2

tag: 10h Metamorph N=2


title: WT_TC_A_15(M)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16421.gif

source_name: 15(M)d Adult N=2

tag: 15(M)d Adult N=2


title: WT_TC_M_48h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16424.gif

source_name: 48h Metamorph N=2

tag: 48h Metamorph N=2


title: WT_TC_M_24h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16419.gif

source_name: 24h Metamorph N=2

tag: 24h Metamorph N=2


title: WT_TC_M_00h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16410.gif

source_name: 00h Metamorph N=2

tag: 00h Metamorph N=2


title: WT_TC_M_06h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16413.gif

source_name: WT TC reference

tag: WT TC reference

source_name: 06h Metamorph N=2

tag: 06h Metamorph N=2


title: WT_TC_A_25(M)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16426.gif

source_name: 25(M)d Adult N=2

tag: 25(M)d Adult N=2


title: WT_TC_M_08h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16414.gif

source_name: 08h Metamorph N=2

tag: 08h Metamorph N=2


title: WT_TC_A_05(F_TUD)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16409.gif

source_name: 5d TUD N=1

tag: 5d TUD N=1


title: WT_TC_E_2.5-3.5h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16336.gif


title: WT_TC_M_16h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16417.gif

source_name: 16h Metamorph N=2

tag: 16h Metamorph N=2


title: WT_TC_E_1-2h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16335.gif

source_name: 1-2h Embryo N=1

tag: 1-2h Embryo N=1


title: WT_TC_A_30(M)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16400.gif


title: WT_TC_A_20(F)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16437.gif

source_name: 20(F)d Adult N=2

tag: 20(F)d Adult N=2


title: WT_TC_A_20(M)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16423.gif

source_name: 20(M)d Adult N=2

tag: 20(M)d Adult N=2


title: WT_TC_A_0-24(F_TUD)h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16408.gif


title: WT_TC_A_30(F)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16406.gif


title: WT_TC_A_25(F)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16404.gif


title: WT_TC_A_0-24(M_TUD)h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16402.gif


title: WT_TC_A_05(M_TUD)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16403.gif

source_name: 5d  TUD N=1

tag: 5d  TUD N=1


title: WT_TC_L_57h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16396.gif

source_name: 57h Larva N=2

tag: 57h Larva N=2


title: WT_TC_A_25(M)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16398.gif


title: WT_TC_L_67h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16399.gif

source_name: 67h Larva N=2

tag: 67h Larva N=2


title: WT_TC_L_33h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16392.gif

source_name: 33h Larva N=2

tag: 33h Larva N=2


title: WT_TC_L_43h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16394.gif

source_name: 43h Larva N=2

tag: 43h Larva N=2


title: WT_TC_L_24h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16391.gif

source_name: 24h Larva N=2

tag: 24h Larva N=2


title: Eya Male Adult 0-24hr Sample B

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2002-11/34822.gif

molecule: polyA RNA

source_name: Wildtype Timecourse Reference

tag: Wildtype Timecourse Reference

source_name: Eya Male Adult 0-24hr Sample B PolyA RNA


title: Eya Female  Adult 0-24hr

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2002-11/34727.gif

source_name: Eya Female  Adult 0-24hr Sample B PolyA RNA


title: Eya Female  Adult 0-24hr Sample A

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2002-11/34729.gif

source_name: Eya Female  Adult 0-24hr Sample A PolyA RNA


title: WT_TC_L_49h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16395.gif

source_name: WT TC reference

source_name: 49h Larva N=2

tag: 49h Larva N=2


title: WT_TC_M_72h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16427.gif

tag: WT TC reference

source_name: 72h Metamorph N=2

tag: 72h Metamorph N=2


title: WT_TC_E_6-7h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15224.gif

source_name: 6-7h Embryo N=1

tag: 6-7h Embryo N=1


title: Unfertilized eggs C

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2002-11/34823.gif

source_name: Unfertilized eggs sample C PolyA RNA

tag: Unfertilized eggs sample C PolyA RNA


title: WT_TC_E_13-14h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15434.gif

source_name: 13-14h Embryo N=2

tag: 13-14h Embryo N=2


title: Eya Male Adult 0-24hr Sample A

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2002-11/34821.gif

source_name: Eya Male Adult 0-24hr Sample A PolyA RNA


title: WT_TC_M_12h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15650.gif

source_name: 12h Metamorph N=2

tag: 12h Metamorph N=2


title: Unfertilized eggs B

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2002-11/34725.gif

source_name: Unfertilized eggs sample B PolyA RNA

tag: Unfertilized eggs sample B PolyA RNA


title: WT_TC_E_5-6h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15223.gif

source_name: 5-6h Embryo N=1

tag: 5-6h Embryo N=1


title: WT_TC_M_42h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15647.gif

source_name: 42h Metamorph N=2

tag: 42h Metamorph N=2


title: WT_TC_M_60h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15651.gif

source_name: 60h Metamorph N=2

tag: 60h Metamorph N=2


title: WT_TC_M_80h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15655.gif

source_name: 80h Metamorph N=2

tag: 80h Metamorph N=2


title: Unfertilized eggs D

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2002-11/34824.gif

source_name: Wildtype Timecourse Reference

source_name: Unfertilized eggs sample D PolyA RNA

tag: Unfertilized eggs sample D PolyA RNA


title: Unfertilized eggs A

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2002-11/34726.gif

source_name: Unfertilized eggs sample A PolyA RNA

tag: Unfertilized eggs sample A PolyA RNA


title: WT_TC_E_9-10h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16390.gif

source_name: 9-10h Embryo N=2

tag: 9-10h Embryo N=2


title: WT_TC_E_2-3h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15426.gif

source_name: WT TC reference

source_name: 2-3h Embryo N=2

tag: 2-3h Embryo N=2


title: WT_TC_E_0.5-1.5h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15422.gif


title: WT_TC_E_3-4h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15430.gif

source_name: 3-4h Embryo N=2

tag: 3-4h Embryo N=2


title: WT_TC_E_3.5-4.5h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15433.gif


title: WT_TC_M_36h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15645.gif

source_name: 36h Metamorph N=2

tag: 36h Metamorph N=2


title: WT_TC_E_2.5-3.5h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15428.gif

tag: WT TC reference


title: WT_TC_E_0-1h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15421.gif

source_name: 0-1h Embryo N=2

tag: 0-1h Embryo N=2


title: WT_TC_E_12-13h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15432.gif

source_name: 12-13h Embryo N=2

tag: 12-13h Embryo N=2


title: WT_TC_E_4.5-5.5h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15425.gif


title: WT_TC_A_10(M)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15713.gif

source_name: 10(M)d Adult N=2

tag: 10(M)d Adult N=2


title: WT_TC_E_4-5h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15435.gif

source_name: 4-5h Embryo N=2

tag: 4-5h Embryo N=2


title: WT_TC_M_20h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15781.gif

source_name: 20h Metamorph N=2

tag: 20h Metamorph N=2


title: WT_TC_M_02h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15639.gif

source_name: 02h Metamorph N=2

tag: 02h Metamorph N=2


title: WT_TC_A_03(M)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15708.gif

source_name: 03(M)d Adult N=2

tag: 03(M)d Adult N=2


title: WT_TC_M_96h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15632.gif

source_name: 96h Metamorph N=1

tag: 96h Metamorph N=1


title: WT_TC_A_05(M_TUD)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15764.gif

source_name: 05(M_TUD)d Adult N=2

tag: 05(M_TUD)d Adult N=2


title: WT_TC_E_7-8h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15256.gif

source_name: 7-8h Embryo N=1

tag: 7-8h Embryo N=1


title: WT_TC_L_96h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15460.gif

source_name: 96h Larva N=2

tag: 96h Larva N=2


title: WT_TC_L_105h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15616.gif

source_name: 105h Larva N=1

tag: 105h Larva N=1


title: WT_TC_M_04h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15641.gif

source_name: 04h Metamorph N=2

tag: 04h Metamorph N=2


title: WT_TC_L_105(M)h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15619.gif

source_name: WT TC reference

source_name: 105(M)h Larva N=1

tag: 105(M)h Larva N=1


title: WT_TC_L_105(M)h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15464.gif

source_name: 105(M)h Larva N=2

tag: 105(M)h Larva N=2


title: WT_TC_L_43h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15596.gif

source_name: 43h Larva N=1

tag: 43h Larva N=1


title: WT_TC_E_22-23h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15450.gif

tag: WT TC reference

source_name: 22-23h Embryo N=2

tag: 22-23h Embryo N=2


title: WT_TC_L_105(F)h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15617.gif

source_name: 105(F)h Larva N=1

tag: 105(F)h Larva N=1


title: WT_TC_M_00h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15598.gif

source_name: 00h Metamorph N=1

tag: 00h Metamorph N=1


title: WT_TC_L_84h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15459.gif

source_name: 84h Larva N=2

tag: 84h Larva N=2


title: WT_TC_L_72h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15456.gif

source_name: 72h Larva N=2

tag: 72h Larva N=2


title: WT_TC_A_0-24(M_TUD)h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15762.gif

source_name: 0-24(M_TUD)h Adult N=2

tag: 0-24(M_TUD)h Adult N=2


title: WT_TC_E_10-11h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15810.gif

source_name: 10-11h Embryo N=2

tag: 10-11h Embryo N=2


title: WT_TC_A_20(M)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15684.gif

source_name: 20(M)dh Adult N=1

tag: 20(M)dh Adult N=1


title: WT_TC_L_105h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15461.gif

source_name: 105h Larva N=2

tag: 105h Larva N=2


title: WT_TC_M_48(M)h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15664.gif

source_name: 48(M)h Metamorph N=2

tag: 48(M)h Metamorph N=2


title: WT_TC_L_105(F)h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15462.gif

source_name: 105(F)h Larva N=2

tag: 105(F)h Larva N=2


title: WT_TC_A_05(M)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-05/16418.gif

source_name: 05(M)d Adult N=2

tag: 05(M)d Adult N=2


title: WT_TC_A_10(F)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15749.gif

source_name: 10(F)d Adult N=2

tag: 10(F)d Adult N=2


title: 808A vs NF (svi060)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3567.gif

source_name: NF

tag: NF


title: WT_TC_A_20(F)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15748.gif

source_name: WT TC reference

source_name: 20(F)d Adult N=1

tag: 20(F)d Adult N=1


title: 122A vs NF (svi042)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4473.gif


title: WT_TC_A_03(F)d_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15744.gif

source_name: 03(F)d Adult N=2

tag: 03(F)d Adult N=2


title: WT_TC_E_23-24h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15452.gif

tag: WT TC reference

source_name: 23-24h Embryo N=2

tag: 23-24h Embryo N=2


title: WT_TC_E_19-20h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15443.gif

source_name: 19-20h Embryo N=2

tag: 19-20h Embryo N=2


title: 710A vs NF (svi056)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3672.gif


title: WT_TC_E_21-22h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15448.gif

source_name: 21-22h Embryo N=2

tag: 21-22h Embryo N=2


title: WT_TC_E_11-12h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15806.gif

source_name: 11-12h Embryo N=2

tag: 11-12h Embryo N=2


title: 406A vs NF (svi053)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4501.gif


title: 123B vs NF (svi043)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4476.gif


title: WT_TC_E_20-21h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15444.gif

source_name: 20-21h Embryo N=2

tag: 20-21h Embryo N=2


title: WT_TC_M_48(F)h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15662.gif

source_name: 48(F)h Metamorph N=2

tag: 48(F)h Metamorph N=2


title: WT_TC_E_4-5h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15222.gif

source_name: 4-5h Embryo N=1

tag: 4-5h Embryo N=1


title: 402B vs NF (svi052)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4500.gif


title: WT_TC_E_3-4h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15220.gif

source_name: 3-4h Embryo N=1

tag: 3-4h Embryo N=1


title: WT_TC_E_23-24h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15297.gif


title: TcF4-DN 23hr (duplo)

description:
Simple annotation: Transcription, tetracycline induction
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10351.gif

source_name: onbekend

tag: onbekend


title: 709B vs NF (svi055)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3670.gif


title: TcF4-DN 11hr (duplo)

description:
Simple annotation: Transcription, tetracycline induction
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10350.gif


title: WT_TC_E_4.5-5.5h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15221.gif


title: 708B vs NF (svi054)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4502.gif


title: BC-2 vs NF (svi061)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3568.gif


title: WT_TC_E_18-19h_N=2

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15442.gif

source_name: 18-19h Embryo N=2

tag: 18-19h Embryo N=2


title: WT_TC_E_22-23h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15294.gif


title: BC-39 vs NF (svi119)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3414.gif


title: 118B vs NF (svi041)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4468.gif


title: WT_TC_E_21-22h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15292.gif


title: BC-34 vs NF (svi116)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3410.gif


title: BC-38 vs NF (svi118)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3413.gif


title: BC-35 vs NF (svi117)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3411.gif


title: WT_TC_E_2-3h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15218.gif

source_name: 2-3h Embryo N=1

tag: 2-3h Embryo N=1


title: WT_TC_E_20-21h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15290.gif


title: WT_TC_E_1.5-2.5h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15216.gif


title: 117A vs NF (svi040)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4465.gif


title: WT_TC_E_18-19h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15283.gif


title: T47D vs NF (svi122)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3556.gif


title: WT_TC_E_3.5-4.5h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15219.gif


title: WT_TC_E_16-17h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15278.gif


title: 1X vs 2X (svi112)

description:
Simple annotation: X Chromosome, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3554.gif


title: 2X vs 2X (svi111)

description:
Simple annotation: X Chromosome, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3551.gif


title: WT_TC_E_19-20h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15286.gif


title: WT_TC_M_72h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15630.gif

source_name: 72h Metamorph N=1

tag: 72h Metamorph N=1


title: BC-31 vs NF (svi115)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3409.gif


title: WT_TC_M_80h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15631.gif

source_name: 80h Metamorph N=1

tag: 80h Metamorph N=1


title: MDA361 vs NF (svi030)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3406.gif

source_name: NF

tag: NF


title: 3X vs 2X (svi110)

description:
Simple annotation: X Chromosome, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3550.gif


title: BC-16 vs NF (svi114)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3408.gif


title: ZR75-1 vs NF (svi025)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3401.gif


title: BC-A vs NF (svi113)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3407.gif

source_name: BC-A

tag: BC-A


title: ZR75-30 vs NF (svi026)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3403.gif


title: 308B vs NF (svi050)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4495.gif


title: SKBR3 vs NF (svi024)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3400.gif


title: 114A vs NF (svi037)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3656.gif


title: WT_TC_M_48h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15627.gif

source_name: WT TC reference

source_name: 48h Metamorph N=1

tag: 48h Metamorph N=1


title: WT_TC_M_42h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15626.gif

tag: WT TC reference

source_name: 42h Metamorph N=1

tag: 42h Metamorph N=1


title: WT_TC_E_0-1h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15775.gif

source_name: 00-1h Embryo N=1

tag: 00-1h Embryo N=1


title: 309A vs NF (svi051)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4497.gif


title: WT_TC_L_24h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15778.gif

source_name: 24h Larva N=1

tag: 24h Larva N=1


title: WT_TC_E_17-18h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15281.gif


title: 116A vs NF (svi039)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3658.gif


title: WT_TC_E_0.5-1.5h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15776.gif


title: 115B vs NF (svi038)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3657.gif


title: WT_TC_M_60h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15629.gif

source_name: 60h Metamorph N=1

tag: 60h Metamorph N=1


title: WT_TC_E_15-16h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15269.gif

source_name: 15-16h Embryo N=1

tag: 15-16h Embryo N=1


title: 111B vs NF (svi035)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3654.gif


title: WT_TC_E_10-11h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15260.gif

source_name: 10-11h Embryo N=1

tag: 10-11h Embryo N=1


title: MDA157 vs NF (svi029)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3549.gif


title: WT_TC_E_13-14h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15265.gif

source_name: 13-14h Embryo N=1

tag: 13-14h Embryo N=1


title: WT_TC_E_14-15h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15266.gif

source_name: 14-15h Embryo N=1

tag: 14-15h Embryo N=1


title: WT_TC_M_24h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15622.gif

source_name: 24h Metamorph N=1

tag: 24h Metamorph N=1


title: WT_TC_M_20h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15620.gif

source_name: 20h Metamorph N=1

tag: 20h Metamorph N=1


title: WT_TC_M_30h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15623.gif

source_name: 30h Metamorph N=1

tag: 30h Metamorph N=1


title: 112B vs NF (svi036)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3655.gif


title: WT_TC_E_12-13h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15263.gif

source_name: 12-13h Embryo N=1

tag: 12-13h Embryo N=1


title: UACC-893 vs NF (svi028)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3547.gif


title: WT_TC_M_16h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15618.gif

source_name: 16h Metamorph N=1

tag: 16h Metamorph N=1


title: 4X vs 2X (svi109)

description:
Simple annotation: X Chromosome, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3548.gif


title: WT_TC_M_12h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15615.gif

source_name: 12h Metamorph N=1

tag: 12h Metamorph N=1


title: E4.3B vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28189.gif

source_name: CP1AB genomic DNA

tag: CP1AB genomic DNA

source_name: E4.3B genomic DNA

tag: E4.3B genomic DNA


title: 110B vs NF (svi033)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3650.gif

source_name: NF

tag: NF


title: BC-24 vs NF (svi067)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4529.gif


title: WT_TC_E_11-12h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15262.gif

source_name: WT TC reference

tag: WT TC reference

source_name: 11-12h Embryo N=1

tag: 11-12h Embryo N=1


title: BC-23 vs NF (svi066)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4525.gif


title: 111A vs NF (svi034)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3652.gif


title: E4.3A vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28187.gif

source_name: E4.3A genomic DNA

tag: E4.3A genomic DNA


title: WT_TC_M_10h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15613.gif

source_name: 10h Metamorph N=1

tag: 10h Metamorph N=1


title: E4.2B vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28181.gif

source_name: E4.2B genomic DNA

tag: E4.2B genomic DNA


title: WT_TC_E_9-10h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15258.gif

source_name: 9-10h Embryo N=1

tag: 9-10h Embryo N=1


title: lrp- + Leu vs. lrp-  - Leu

description:
Simple annotation: Media comparisons, Mutant
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14832.gif

organism: Escherichia coli

source_name: "W3110 lrp- in MOPS (ile, val, thi) to OD420~0.3, 20 ug total RNA, 10 ug pdN6"

source_name: "W3110 lrp- at OD420~0.3 in MOPS  (ile, val, thi) plus Leu, 20 ug total RNA, 10 ug pdN6 "


title: UACC-812 vs NF (svi027)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3541.gif


title: 5X vs 2X (svi108)

description:
Simple annotation: X Chromosome, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3544.gif


title: WT_TC_M_36h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15624.gif

source_name: 36h Metamorph N=1

tag: 36h Metamorph N=1


title: E1 top PFG band vs CP1AB plug

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/30020.gif

source_name: CP1AB plug DNA

tag: CP1AB plug DNA

source_name: E1 top PFG band 4/17/2 DNA

tag: E1 top PFG band 4/17/2 DNA


title: E4 PFG band vs. CP1AB plug

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28120.gif

source_name: E4 band DNA

tag: E4 band DNA


title: WT_TC_L_84h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15611.gif

source_name: 84h Larva N=1

tag: 84h Larva N=1


title: BC-21 vs NF (svi065)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4521.gif


title: WT_TC_M_08h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15610.gif

source_name: 08h Metamorph N=1

tag: 08h Metamorph N=1


title: WT_TC_A_15(M)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15683.gif

source_name: 15(M)dh Adult N=1

tag: 15(M)dh Adult N=1


title: WT_TC_L_96h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15612.gif

source_name: 96h Larva N=1

tag: 96h Larva N=1


title: E3 vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11570.gif

source_name: CP1AB genomic DNA

tag: CP1AB genomic DNA

source_name: E3 genomic DNA

tag: E3 genomic DNA


title: E4.2A vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28175.gif

source_name: E4.2A genomic DNA

tag: E4.2A genomic DNA


title: 214B vs NF (svi048)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4485.gif

source_name: NF

tag: NF


title: CP1AB vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/13020.gif

source_name: CP1AB prep 2 genomic DNA

tag: CP1AB prep 2 genomic DNA

source_name: CP1AB prep 1 genomic DNA

tag: CP1AB prep 1 genomic DNA


title: lrp- + Leu vs. wt - Leu

description:
Simple annotation: Media comparisons, Mutant
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14830.gif

source_name: "W3110 wt in MOPS (ile, val, thi) at OD420~0.3, 20 ug total,10 ug pdN6"

source_name: "W3110 lrp- at OD420~0.3 in MOPS  (ile, val, thi) + Leu, 20 ug total RNA ,10 ug pdN6 "


title: WT_TC_A_10(M)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15682.gif

source_name: WT TC reference

tag: WT TC reference

source_name: 10(M)dh Adult N=1

tag: 10(M)dh Adult N=1


title: lrp- - Leu vs. wt - Leu

description:
Simple annotation: Media comparisons, Mutant
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14831.gif

tag: "W3110 wt in MOPS (ile, val, thi) at OD420~0.3, 20 ug total,10 ug pdN6"

source_name: "W3110 lrp- at OD420~0.3 in MOPS  (ile, val, thi), 20 ug total, 10 ug pdN6 "


title: E4.1B vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28174.gif

source_name: E4.1B genomic DNA

tag: E4.1B genomic DNA


title: WT_TC_A_05(M)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15681.gif

source_name: 05(M)dh Adult N=1

tag: 05(M)dh Adult N=1


title: E1.4C vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11929.gif

source_name: E1.4C genomic DNA

tag: E1.4C genomic DNA


title: wt + Leu vs. wt - Leu

description:
Simple annotation: Media comparisons, Mutant
Image: http://smd.stanford.edu/MicroArray/gifs/2001-03/14829.gif

source_name: "W3110 wt OD420~0.3 in MOPS  (ile, val, thi) + Leu, 20 ug total RNA, 10 ug pdN6 "


title: E4.4B vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28191.gif

source_name: E4.4B genomic DNA

tag: E4.4B genomic DNA


title: WT_TC_A_03(M)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15680.gif

source_name: 03(M)dh Adult N=1

tag: 03(M)dh Adult N=1


title: E5 PFG band vs CP1AB plug

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-08/32126.gif

source_name: CP1AB plug

tag: CP1AB plug

source_name: E5 band plug

tag: E5 band plug


title: 305A vs NF (svi049)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4486.gif


title: CP1AB vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/13021.gif


title: E1.2C vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11927.gif

source_name: CP1AB genomic DNA

source_name: E1.2C genomic DNA

tag: E1.2C genomic DNA


title: E4.4A vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28190.gif

tag: CP1AB genomic DNA


title: 213B vs NF (svi047)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4484.gif

source_name: NF


title: WT_TC_L_72h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15609.gif

source_name: 72h Larva N=1

tag: 72h Larva N=1


title: 107B vs NF (svi032)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3649.gif


title: 206A vs NF (svi045)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4482.gif


title: E4.1A vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28173.gif

source_name: E4.1A genomic DNA

tag: E4.1A genomic DNA


title: E1.7A vs. CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12565.gif

source_name: E1.7A genomic DNA

tag: E1.7A genomic DNA


title: BC-17 vs NF (svi064)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3574.gif

tag: NF


title: E8 PFG band vs CP1AB plug

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28172.gif

source_name: CP1AB plug DNA

tag: CP1AB plug DNA

source_name: E8 band DNA

tag: E8 band DNA


title: WT_TC_M_02h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15603.gif

source_name: WT TC reference

tag: WT TC reference

source_name: 02h Metamorph N=1

tag: 02h Metamorph N=1


title: E1.1B vs. CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11925.gif

source_name: E1.1B genomic DNA

tag: E1.1B genomic DNA


title: E1.5B vs. CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12564.gif

source_name: E1.5B genomic DNA

tag: E1.5B genomic DNA


title: WT_TC_M_06h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15608.gif

source_name: 06h Metamorph N=1

tag: 06h Metamorph N=1


title: E1 vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11568.gif

source_name: E1 genomic DNA

tag: E1 genomic DNA


title: WT_TC_L_57h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15602.gif

source_name: 57h Larva N=1

tag: 57h Larva N=1


title: E2 vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11569.gif

source_name: E2 genomic DNA

tag: E2 genomic DNA


title: 807A vs NF (svi059)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4519.gif


title: 208A vs NF (svi046)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4483.gif


title: E1.4D vs. CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12563.gif

source_name: E1.4D genomic DNA

tag: E1.4D genomic DNA


title: E8 vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29615.gif

source_name: E8 genomic DNA

tag: E8 genomic DNA

source_name: CP1AB genomic DNA


title: E7 PFG band vs CP1AB plug

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28171.gif

source_name: E7 band DNA

tag: E7 band DNA


title: E7 vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29614.gif

source_name: E7 genomic DNA

tag: E7 genomic DNA

tag: CP1AB genomic DNA


title: E1 bottom PFG band vs CP1AB plug

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28119.gif

source_name: E1 bottom band DNA

tag: E1 bottom band DNA


title: E6 PFG band vs CP1AB plug

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-04/28170.gif

source_name: E6 band DNA

tag: E6 band DNA


title: BT474 vs NF

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3395.gif

source_name: NF

tag: NF


title: 124A vs NF (svi044)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4480.gif


title: WT_TC_M_04h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15606.gif

source_name: 04h Metamorph N=1

tag: 04h Metamorph N=1


title: 805A vs NF (svi058)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4517.gif


title: E3 vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/13019.gif

source_name: E3 genomic DNA

tag: E3 genomic DNA


title: E6 vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29613.gif

source_name: E6 genomic DNA

tag: E6 genomic DNA


title: WT_TC_A_0-24(M)h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15677.gif

source_name: WT TC reference

tag: WT TC reference

source_name: 0-24(M)hh Adult N=1

tag: 0-24(M)hh Adult N=1


title: E1 vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/12140.gif


title: E1.2D vs. CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12562.gif

source_name: E1.2D genomic DNA

tag: E1.2D genomic DNA


title: WT_TC_A_15(F)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15747.gif

source_name: 15(F)d Adult N=1

tag: 15(F)d Adult N=1


title: E2 vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/12141.gif


title: BC-4 vs NF (svi062)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3571.gif


title: E7 vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29595.gif


title: 711B vs NF (svi057)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-04/4516.gif


title: WT_TC_A_10(F)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15745.gif

source_name: 10(F)d Adult N=1

tag: 10(F)d Adult N=1


title: E4 vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29598.gif

source_name: E4 genomic DNA

tag: E4 genomic DNA


title: WT_TC_A_03(F)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15740.gif

source_name: 03(F)d Adult N=1

tag: 03(F)d Adult N=1


title: WT_TC_L_49h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15599.gif

source_name: 49h Larva N=1

tag: 49h Larva N=1


title: BC-40 vs NF (svi120)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3422.gif


title: E5 vs CP1AB genomic DNA rep 2

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29599.gif

source_name: E5 genomic DNA

tag: E5 genomic DNA

source_name: CP1AB genomic DNA


title: WT_TC_L_33h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15594.gif

source_name: 33h Larva N=1

tag: 33h Larva N=1


title: E5 vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29593.gif

tag: CP1AB genomic DNA


title: E1.1C vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12559.gif

source_name: E1.1C genomic DNA

tag: E1.1C genomic DNA


title: E1.6B vs. CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12576.gif

source_name: E1.6B genomic DNA

tag: E1.6B genomic DNA


title: E6 vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29594.gif


title: MCF7 vs NF (svi121)

description:
Simple annotation: Breast, aCGH cell line
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3423.gif

source_name: NF

tag: NF


title: E1.7D vs. CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2001-01/12577.gif

source_name: E1.7D genomic DNA

tag: E1.7D genomic DNA


title: E8 vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29596.gif

source_name: E8 genomic DNA

tag: E8 genomic DNA


title: WT_TC_A_0-24(F)h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15739.gif

source_name: 0-24(F)h Adult N=1

tag: 0-24(F)h Adult N=1


title: E4 vs CP1AB genomic DNA rep 1

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2002-06/29591.gif


title: E1.6A vs. CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11932.gif

source_name: E1.6A genomic DNA

tag: E1.6A genomic DNA


title: BC-14 vs NF (svi063)

description:
Simple annotation: Breast, aCGH tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3573.gif


title: Tcf4-DN 23hr

description:
Simple annotation: Transcription, tetracycline induction
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6443.gif

source_name: LS174T-tet 23hr

tag: LS174T-tet 23hr

source_name: LS174T+tet 23hr

tag: LS174T+tet 23hr


title: Cordycepin time course: 0 vs 120 min (III)

status: Public on Sep 09 2005

description:
Simple annotation: RNA stability, Drug treatment
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11339.gif

organism: Arabidopsis thaliana

source_name: 0 min of cordycepin time course

tag: 0 min of cordycepin time course

source_name: 120 min of cordycepin time course

tag: 120 min of cordycepin time course


title: Tcf4-DN 11hr

description:
Simple annotation: Transcription, tetracycline induction
Image: http://smd.stanford.edu/MicroArray/gifs/2000-05/6432.gif

source_name: LS174T-tet 11hr

tag: LS174T-tet 11hr

source_name: LS174T+tet 11hr

tag: LS174T+tet 11hr


title: Mast Cell Batch S8: 0 hr

description:
Simple annotation: Stimulation, Mast cells
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3901.gif

source_name: Galli lab cell line reference

tag: Galli lab cell line reference

source_name: Mast Cell Batch S8: 0 hr

tag: Mast Cell Batch S8

value: 0 hr


title: Transcript Abundance in LB at 30 degrees OD600=0.8 Trial B

type: mixed

description:
Simple annotation: Absolute transcript levels, Miscellaneous
Image: http://smd.stanford.edu/MicroArray/gifs/2002-03/25831.gif

source_name: 2 ug of MG1655 (Repaired NCM 3416) Genomic DNA

source_name: 20 ug of Total RNA from MG1655 (Repaired NCM 3416) in LB at 30 degrees OD 600=0.8


title: Cordycepin time course: 0 vs 120 min (II)

description:
Simple annotation: RNA stability, Drug treatment
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11333.gif


title: Mast Cell Batch S7: 1 hr

description:
Simple annotation: Stimulation, Mast cells
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3895.gif

source_name: Mast Cell Batch S7: 1 hr

tag: Mast Cell Batch S7

value: 1 hr


title: Cordycepin time course: 120 vs 0 min (III)

description:
Simple annotation: RNA stability, Drug treatment
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11342.gif


title: Transcript Abundance in M9 at 30 degrees OD600=0.8 Trial A

description:
Simple annotation: Absolute transcript levels, Miscellaneous
Image: http://smd.stanford.edu/MicroArray/gifs/2002-03/25822.gif

source_name: 2 ug of Genomic MG 1655 (Repaired NCM 3416) DNA

source_name: 20 ug of Total RNA from MG1655 (Repaired NCM 3416) in M9 at 30 degrees OD 600=0.8


title: CA55 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10266.gif

organism: Helicobacter pylori

source_name: 1 ug 26695 genomic DNA + 1ug J99 genomic DNA

source_name: 2 ug CA55 genomic DNA

tag: 2 ug CA55 genomic DNA


title: CD2-Chitin Timecourse 3h B

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10644.gif


title: Transcript Abundance in M9 at 30 degrees OD600=0.8 Trial B

description:
Simple annotation: Absolute transcript levels, Miscellaneous
Image: http://smd.stanford.edu/MicroArray/gifs/2002-03/25825.gif

tag: 2 ug of MG1655 (Repaired NCM 3416) Genomic DNA

tag: 20 ug of Total RNA from MG1655 (Repaired NCM 3416) in M9 at 30 degrees OD 600=0.8


title: CA59 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10267.gif

tag: 1 ug 26695 genomic DNA + 1ug J99 genomic DNA

source_name: 2 ug CA59 genomic DNA

tag: 2 ug CA59 genomic DNA


title: Cordycepin time course: 0 vs 120 min

description:
Simple annotation: RNA stability, Drug treatment
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11374.gif


title: Cordycepin time course: 120 vs 0 min (II)

description:
Simple annotation: RNA stability, Drug treatment
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11375.gif


title: Mast Cell Batch S7: 0 hr

description:
Simple annotation: Stimulation, Mast cells
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3890.gif

source_name: Mast Cell Batch S7: 0 hr


title: CA73 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10268.gif

source_name: 2 ug CA73 genomic DNA

tag: 2 ug CA73 genomic DNA


title: Mast Cell Batch S8: 2 hr

description:
Simple annotation: Stimulation, Mast cells
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3903.gif

source_name: Mast Cell Batch S8: 2 hr

value: 2 hr


title: CD1-Chitin Timecourse 3h A

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10648.gif


title: Transcript Abundance in LB at 30 degrees OD600=0.8 Trial A

description:
Simple annotation: Absolute transcript levels, Miscellaneous
Image: http://smd.stanford.edu/MicroArray/gifs/2002-03/25827.gif

tag: 20 ug of Total RNA from MG1655 (Repaired NCM 3416) in LB at 30 degrees OD 600=0.8


title: Hp1 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10274.gif

source_name: 2 ug Hp1 genomic DNA

tag: 2 ug Hp1 genomic DNA


title: Mast Cell Batch S8: 1 hr

description:
Simple annotation: Stimulation, Mast cells
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3902.gif

source_name: Mast Cell Batch S8: 1 hr


title: E1.5A vs CP1AB genomic DNA

description:
Simple annotation: evolution, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2000-12/11931.gif

source_name: CP1AB genomic DNA

tag: CP1AB genomic DNA

source_name: E1.5A genomic DNA

tag: E1.5A genomic DNA


title: Mast Cell Batch S7: 2 hr

description:
Simple annotation: Stimulation, Mast cells
Image: http://smd.stanford.edu/MicroArray/gifs/2000-03/3900.gif

source_name: Galli lab cell line reference

source_name: Mast Cell Batch S7: 2 hr


title: 67:21 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10273.gif

source_name: 2 ug 67:21 genomic DNA

tag: 2 ug 67:21 genomic DNA


title: Cordycepin time course: 120 vs 0 min

description:
Simple annotation: RNA stability, Drug treatment
Image: http://smd.stanford.edu/MicroArray/gifs/2000-11/11323.gif

source_name: 120 min of cordycepin time course

tag: 120 min of cordycepin time course

source_name: 0 min of cordycepin time course

tag: 0 min of cordycepin time course


title: CA8 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10265.gif

source_name: 2 ug CA8 genomic DNA

tag: 2 ug CA8 genomic DNA


title: CE1-Chitin Timecourse 6h A

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10645.gif


title: CB1-Chitin Timecourse 30 min A

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10618.gif

source_name: CC30 min

tag: CC30 min

source_name: C30 min

tag: C30 min


title: 67:20 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10879.gif

source_name: 1ug Tigr genomic DNA + 1ug Astra genomic DNA

source_name: 2 ug 67:20 genomic DNA

tag: 2 ug 67:20 genomic DNA


title: Control 76 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10271.gif

source_name: 1 ug 26695 genomic DNA + 1ug J99 genomic DNA

source_name: 2 ug Control 76 genomic DNA

tag: 2 ug Control 76 genomic DNA


title: 67:20 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10272.gif


title: Control 76 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10878.gif

tag: 1ug Tigr genomic DNA + 1ug Astra genomic DNA


title: CE2-Stacey Chitin Timecourse 6hB

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10963.gif


title: CF1-Chitin Timecourse 24h A

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10649.gif


title: CA32 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10270.gif

source_name: 2 ug CA32 genomic DNA

tag: 2 ug CA32 genomic DNA


title: 8' RNA Decay of MG1655 (Repaired MCM 3416) in M9 + 0.2% Glucose Trial A

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8542.gif

source_name: MG1655 (Repaired MCM 3416) in M9 + 0.2% Glucose 8' post rif


title: CC1-Stacey Chitin Timecourse 1hA

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10961.gif


title: CA1-Chitin Timecourse 10 min A

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10615.gif

source_name: CC10 min

tag: CC10 min

source_name: C10 min

tag: C10 min


title: CC2-Stacey Chitin Timecourse 1hB

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10962.gif


title: CA50 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10208.gif

tag: 1 ug 26695 genomic DNA + 1ug J99 genomic DNA

source_name: 2 ug CA50 genomic DNA

tag: 2 ug CA50 genomic DNA


title: CF2-Chitin Timecourse 24h B

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10650.gif


title: 6' RNA Decay of MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose Trial A

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8540.gif

source_name: MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose 6' post rif


title: CA23 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10209.gif

source_name: 2 ug CA23 genomic DNA

tag: 2 ug CA23 genomic DNA


title: CA34 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10869.gif

source_name: 2 ug CA34 genomic DNA

tag: 2 ug CA34 genomic DNA


title: WT_TC_L_67h_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15607.gif

source_name: WT TC reference

tag: WT TC reference

source_name: 67h Larva N=1

tag: 67h Larva N=1


title: CA2-Chitin Timecourse 10 min B

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10616.gif


title: CA52 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10216.gif

source_name: 2 ug CA52 genomic DNA

tag: 2 ug CA52 genomic DNA


title: 8' RNA Decay of MG1655 (Repaired NCM 3416) in LB at 30 C

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8380.gif

source_name: MG1655 at 30 Degrees

tag: MG1655 at 30 Degrees

source_name: MG1655 8' post rif

tag: MG1655 8' post rif


title: WT_TC_A_05(F)d_N=1

description:
Simple annotation: Development, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2001-04/15742.gif

source_name: 05(F)d Adult N=1

tag: 05(F)d Adult N=1


title: CA32 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10877.gif

source_name: 1ug Tigr genomic DNA + 1ug Astra genomic DNA


title: 8' RNA Decay of MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose Trial B

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8589.gif

source_name: MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose 8' post rif


title: Control 86:2 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10868.gif

source_name: 2 ug Control 86:2 genomic DNA

tag: 2 ug Control 86:2 genomic DNA


title: 6' RNA Decay of MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose Trial B

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8586.gif

tag: MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose 6' post rif


title: CA40 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10215.gif

source_name: 1 ug 26695 genomic DNA + 1ug J99 genomic DNA

source_name: 2 ug CA40 genomic DNA

tag: 2 ug CA40 genomic DNA


title: 4' RNA Decay of MG1655 (Repaired NCM 3416) in LB at 30 C

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8378.gif

source_name: MG1655 4' post rif

tag: MG1655 4' post rif


title: 6' RNA Decay of MG1655 (Repaired NCM 3416) in LB at 30 C

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8379.gif

source_name: MG1655 6' post rif

tag: MG1655 6' post rif


title: 4' RNA Decay of MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose Trial B

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8584.gif

source_name: MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose 4' post rif


title: CA34 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10213.gif


title: CA73vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10874.gif

tag: 1ug Tigr genomic DNA + 1ug Astra genomic DNA

source_name: 2 ug CA73 genomic DNA

tag: 2 ug CA73 genomic DNA


title: CA59 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10873.gif

source_name: 2 ug CA59 genomic DNA

tag: 2 ug CA59 genomic DNA


title: 2' RNA Decay of MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose Trial B

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8582.gif

source_name: MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose 2' post rif


title: 2' RNA Decay of MG1655 (Repaired NCM 3416) in LB at 30 C

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8377.gif

source_name: MG1655 2' post rif

tag: MG1655 2' post rif


title: Control 61:4 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10867.gif

source_name: 2 ug Control 61:4 genomic DNA

tag: 2 ug Control 61:4 genomic DNA


title: CB2-Chitin Timecourse 30 min B

description:
Simple annotation: Pathogen, Time course
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10619.gif

source_name: CC30 min

tag: CC30 min

source_name: C30 min

tag: C30 min


title: 2' RNA Decay of MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose Trial A

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8536.gif

tag: MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose 2' post rif


title: MALT19 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10876.gif

source_name: 2 ug MALT19 genomic DNA

tag: 2 ug MALT19 genomic DNA


title: 4' RNA Decay of MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose Trial A

description:
Simple annotation: RNA decay, Rifampicin
Image: http://smd.stanford.edu/MicroArray/gifs/2000-08/8538.gif

tag: MG1655 (Repaired NCM 3416) in M9 + 0.2% Glucose 4' post rif


title: CA23 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10865.gif

source_name: 2 ug CA23genomic DNA

tag: 2 ug CA23genomic DNA


title: CA40 vs Tigr/Astra Reference 2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-10/10882.gif

source_name: 1ug Tigr genomic DNA + 1ug Astra genomic DNA


title: control 86:2 genomic DNA vs. Tigr/Astra ref

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2000-09/10212.gif

tag: 1 ug 26695 genomic DNA + 1ug J99 genomic DNA

source_name: 2 ug control 86:2 genomic DNA

tag: 2 ug control 86:2 genomic DNA