title: Fetal frontal cortex cocaine1

description:
Frontal and occipital regions of the cerebral wall were analyzed separately since they differ significantly in the levels of dopaminergic
innervation, which has been postulated as one of the
major targets of prenatal cocaine exposure.
Pregnant Swiss Webster mice were used as a model
because cocaine treatment in these animals has been shown
to result in offspring with reduced cerebral cortical mass
indicating death of cells in the fetal cerebral wall.

hyb_protocol: For each assay, 5 mkg of RNA from control tissue and 5 mkg of RNA from experimental tissue were reverse transcribed using 3DNA Array Detection Kit (Genesphere, Hatfield, PA) with primers containing different dcaptureT sequences for control and experimental samples. SuperScript II Reverse Transcriptase for these reactions was purchased from Gibco BRL (Gaithersburg, MD). The resultant cDNAs were hybridized to microarray slides for 16 h in Agilent Hybridization Buffer (Agilent Technol) at 60 8C. Upon completion of the hybridization, the slides were washed for 10 min with 0.005% Triton in 6xsodium chloride/sodium citrate buffer (pH 7; SSC) at room temperature and then for five more min with 0.005% Triton in 0.1xSSC and 1 more minute in 0.1xSSC (pH 7), both at 4 8C. Washed slides were air-dried for 30 s. For fluorescent labeling of microarray-bound cDNA, the slides were incubated for 3 h at 65 8C with Capture Reagent Hybridization Mixture from 3DNA Array Detection Kit (Genesphere). In this mixture, Alexa 546 fluorochromeincorporating dendrimers contained single-stranded arms complimentary to the dcaptureT sequences used in the reverse transcription of RNA from control tissue, while Alexa 647 fluorochrome-incorporating dendrimers contained arms complimentary to the capture sequences used in reverse transcription of RNA from experimental tissue. The labeling reaction was terminated by washing of the microarray slides at room temperature for 10 min with 0.005% Triton in 2xSSC and for another 10 min with in 0.2xSSC. After that, the slides were air-dried for 30 s.

scan_protocol: The processed microarray slides were scanned at 10 Am resolution on a GenePix 4100A scanner (Axon Instr., Union City, CA) with the laser excitation at 532 nm [emission filter 575DF35 (green); photomultiplier voltage 550] for Alexa 546 (control samples) and the laser excitation at 635 nm [emission filter 670DF40 (red); photomultiplier voltage 695] for Alexa 647 (experimental samples). The signals were converted into 16-bits-per pixel resolution images, providing color depth of 65,536 levels. The densitometry was performed with GenePix Pro 4.1 software (Axon Instr.). Background was subtracted using the dlocal background correctionT procedure available in the software. Quality control utilized 255 positive controls, 161 negative controls and 646 QC-spots present on Agilent’s arrays.

data_processing:
The densitometry was performed with GenePix Pro 4.1 software (Axon Instr.). Background was subtracted using the dlocal background
correctionT procedure available in the software. Quality
control utilized 255 positive controls, 161 negative controls
and 646 dQC-spotsT present on Agilent’s arrays. For
replicates within a slide, median signal values were
calculated. For each array, the data were normalized in
Acuity 3.1 software (Axon Instr.) by applying locally
weighted scatterplot smoothing (LOWESS) transformation.
The between array scale normalization
was done using intensity log10 ratio distribution box plots (GeneSight
software, BioDiscovery, El Segundo, CA) for verification.
Statistical analysis of the normalized data was conducted
by the Significant Analyses for Microarray Algorithm
(SAM [74]) using Excel macros available at Stanford
SAM website. In the analyses of
both frontal and occipital regions of the fetal cerebral wall,
the cut-off thresholds were set to identify the maximum number of cocaine exposure-regulated genes at the minimal
false discovery rate (FDR) allowed by SAM for a given set
of microarray data. For both regions, the FDR rates were
<0.5%.

label: Alexa546, Alexa647

source_name: Frontal cortex fetal

label_protocol:
For each assay, 5 mkg of RNA from
control tissue and 5 mkg of RNA from experimental tissue
were reverse transcribed using 3DNA Array Detection Kit
(Genesphere, Hatfield, PA) with primers containing different
dcaptureT sequences for control and experimental
samples. SuperScript II Reverse Transcriptase for these
reactions was purchased from Gibco BRL (Gaithersburg,
MD). The resultant cDNAs were hybridized to microarray
slides for 16 h in Agilent Hybridization Buffer (Agilent
Technol) at 60 8C.
For fluorescent labeling of microarray-bound cDNA, the slides
were incubated for 3 h at 65 8C with Capture Reagent
Hybridization Mixture from 3DNA Array Detection Kit
(Genesphere).

extract_protocol:
Total RNA
was isolated using TRIzol Reagent (Invitrogen, Carlsbad,
CA). The yield of total RNA was determined by absorbance
at 260 nm on a DU 640 Spectrophotometer (Beckman
Coulter, Fullerton, CA). The 260/280 nm ratios of the
samples were N1.8. For each assay, 5 mkg of RNA from
control tissue and 5 mkg of RNA from experimental tissue
were used.

treatment_protocol:
Timed pregnant Swiss Webster (CFW; Charles River
Lab. Wilmington, MA) dams were maintained in individual
cages in a climate-controlled room on a 12/12-h light/
dark cycle. They were divided into two groups. The first
(experimental) group received subcutaneous (at the dorsum
of the neck) injections of 20 mg/kg cocaine hydrochloride
(Research Technology Branch, National Institute
of Drug Abuse, Rockville, MD) dissolved in 200 mkl of
0.9% saline, twice a day (at 8:00 AM and 8:00 PM) from
8th through 18th day of pregnancy (E8–E18). The second
(control) group was subjected to the same schedule of
0.9% saline only injections.  Throughout the
treatment, all mice were weighed daily, and, from E8, the
control and experimental animals were pair-fed, with the
daily amount of food (Mouse Chow; Ralston Purina Saint
Louis, MO) provided to each control dam being matched
to that consumed by the paired experimental dam. Water
was available ad libitum. On E18,1 h after the morning treatment, the animals were anesthetized by peritoneal injection of 50 mg/kg sodium
pentobarbital (Abbott Lab., Abbott Park, IL) and their
uteri were removed. The frontal cerebral wall (containing
cerebral cortex and underlying transient cortical zones
anterior to the striatal level) and the occipital cerebral wall
(containing cerebral cortex and underlying transient
cortical zones posterior to the level of the hippocampus)
were dissected from the fetuses and stored in liquid
nitrogen prior to analysis. Tissue from two control and two experimental fetuses were used in the processing of a single microarray slide
(Part G4121A, Agilent Technol). Five slides were processed
per region of the fetal cerebral wall. For a given region, the
tissue for each microarray slide was obtained from a
separate set of control and experimental litters.

tag: On E18,1 h after the morning treatment, the animals (pregnant Swiss Webster (CFW; Charles RiverLab. Wilmington, MA) dams were anesthetized by peritoneal injection of 50 mg/kg sodium

tag: nitrogen prior to analysis. The animal experimentations

tag: used in this study were approved by the University of

tag: Maryland Animal Care and Use Committee.


title: 13296231

status: Public on Jan 01 2007

type: other

city: Valbonne - Sophia-Antipolis

first: Kevin

last: Lebrigand

address: 660 route des lucioles

country: France

institute: IPMC/CNRS

description: 2005/10/07 - 13296231

hyb_protocol: Both channel labelled-miRNA were then combined, purified and hybridized in 50 μl hybridization buffer (Corning Hybridization chamber) during 16 hrs at 45°C. Arrays were then washed and treated for a sequential Cy3 and Cy5 detection process following the MICROMAX kit procedure.

scan_protocol: Fluorescent array images were collected for both Cy3 and Cy5 with a GenePix 4000A fluorescent scanner and image intensity data were extracted and analyzed with GenePix Pro 6.0 analysis software.

data_processing: GenePix Pro 6.0 analysis software

molecule: other

organism: Homo sapiens

source_name: N21 non-infected 21 h

label_protocol: 1 μg of each small RNA fraction was chemically labelled with fluorescein and biotin using the MICROMAX kit (Perkin Elmer # MPS545).

extract_protocol: Small RNA purification using MirVana (Ambion) protocol from Total RNA.

source_name: I21 infected 21 h


title: 13296217

description: 2005/10/13 - 13296217

source_name: N42 non-infected 42 h

source_name: I42 infected 42 h


title: Saline control-neocortex, biological rep1

status: Public on Jan 04 2007

type: RNA

city: Maebashi

first: Noriyuki

last: Akahoshi

state: Gunma

address: 3-39-22 Showa-machi

department: Molecular and Cellular Neurobiology

country: Japan

institute: Gunma University Graduate School of Medicine

description: Gene expression data from a neocortex of saline-injected mouse

hyb_protocol: Following fragmentation, 10 microgram of cRNA were hybridized for 16 hr at 45C on GeneChip Murine Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.

data_processing: The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.

label: biotin

molecule: total RNA

organism: Mus musculus

source_name: neocortex

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 12 microgram total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

extract_protocol: Trizol extraction of total RNA was performed according to the manufacturer's instructions.

treatment_protocol: saline ip injection at postnatal day 23

tag: C57BL/6N, postnatal day 30


title: 13296211

description: 2005/10/07 - 13296211

source_name: N0 non-infected 0 h

source_name: I0 infected 0h


title: 13296213

description: 2005/10/07 - 13296213

source_name: I0 infected 0 h


title: 13296216

description: 2005/10/07 - 13296216

source_name: I7 infected 7 h

source_name: N7 non-infected 7 h


title: healthy control sample x302

status: Public on Dec 30 2006

city: Lyngby

first: Aron

middle: C

last: Eklund

address: Kemitorvet, Building 208

department: Center for Biological Sequence Analysis

country: Denmark

institute: Technical University of Denmark

description: Whole blood from a healthy control

hyb_protocol: standard Affymetrix procedures

scan_protocol: standard Affymetrix procedures

data_processing: Affymetrix Microarray Suite version 5.0

source_name: whole blood

label_protocol: Approximately 4 µg of total RNA was processed to produce biotinylated cRNA targets.

extract_protocol: Venous blood was collected in PAXgene (PreAnalytiX) tubes and immediately incubated at room temperature for 24 hours. RNA was then extracted following the PAXgene procedure including DNase treatment.

tag: healthy control


title: 13296214

description: 2005/10/07 - 13296214


title: 13296218

description: 2005/10/13 - 13296218


title: 13296232

description: 2005/10/07 - 13296232

hyb_protocol: Fluorescent array images were collected for both Cy3 and Cy5 with a GenePix 4000A fluorescent scanner and image intensity data were extracted and analyzed with GenePix Pro 6.0 analysis software.


title: Parkinson's disease sample x205

description: Whole blood from a patient with Parkinson's disease

tag: Parkinson's disease


title: neurological disease control sample x203

description: Whole blood from a patient with progressive supranuclear palsy

tag: neurological disease control


title: Parkinson's disease sample x199


title: Parkinson's disease sample x200


title: neurological disease control sample x208


title: Parkinson's disease sample x193


title: neurological disease control sample x197

description: Whole blood from a patient with Alzheimer's disease


title: Parkinson's disease sample x204


title: Parkinson's disease sample x188


title: healthy control sample x191

description: Whole blood from a healthy control


title: Parkinson's disease sample x189


title: Parkinson's disease sample x186


title: healthy control sample x198

description: Whole blood from a healthy control


title: Parkinson's disease sample x190


title: Parkinson's disease sample x187


title: healthy control sample x201

description: Whole blood from a healthy control


title: Parkinson's disease sample x185


title: healthy control sample x192

description: Whole blood from a healthy control


title: Parkinson's disease sample x184


title: neurological disease control sample x181


title: Parkinson's disease sample x178


title: neurological disease control sample x180


title: healthy control sample x177

description: Whole blood from a healthy control


title: Parkinson's disease sample x176


title: Parkinson's disease sample x175


title: neurological disease control sample x170


title: healthy control sample x169

description: Whole blood from a healthy control


title: neurological disease control sample x165


title: neurological disease control sample x160


title: neurological disease control sample x161


title: Parkinson's disease sample x174


title: neurological disease control sample x166


title: healthy control sample x171

description: Whole blood from a healthy control


title: neurological disease control sample x164


title: neurological disease control sample x155

description: Whole blood from a patient with essential tremor


title: neurological disease control sample x162


title: healthy control sample x182

description: Whole blood from a healthy control


title: neurological disease control sample x159


title: neurological disease control sample x156


title: neurological disease control sample x172


title: neurological disease control sample x167


title: Parkinson's disease sample x153


title: neurological disease control sample x163

description: Whole blood from a patient with multiple system atrophy


title: neurological disease control sample x150


title: Parkinson's disease sample x149


title: neurological disease control sample x151


title: neurological disease control sample x128


title: neurological disease control sample x132


title: Parkinson's disease sample x124


title: neurological disease control sample x125


title: neurological disease control sample x129


title: neurological disease control sample x127


title: neurological disease control sample x126


title: healthy control sample x120

description: Whole blood from a healthy control


title: Parkinson's disease sample x109


title: Parkinson's disease sample x123


title: Parkinson's disease sample x114


title: Parkinson's disease sample x122


title: Parkinson's disease sample x118


title: Parkinson's disease sample x110


title: Parkinson's disease sample x115


title: neurological disease control sample x116


title: healthy control sample x121

description: Whole blood from a healthy control


title: healthy control sample x117

description: Whole blood from a healthy control


title: neurological disease control sample x119


title: Parkinson's disease sample x108


title: healthy control sample x112

description: Whole blood from a healthy control


title: neurological disease control sample x107


title: neurological disease control sample x104


title: Parkinson's disease sample x106


title: Parkinson's disease sample x102


title: Parkinson's disease sample x103


title: Parkinson's disease sample x100


title: Parkinson's disease sample x098


title: healthy control sample x097

description: Whole blood from a healthy control


title: healthy control sample x062

description: Whole blood from a healthy control


title: neurological disease control sample x087

description: Whole blood from a patient with corticobasal degeneration


title: Parkinson's disease sample x045


title: Parkinson's disease sample x023


title: healthy control sample x027

description: Whole blood from a healthy control


title: healthy control sample x044a

description: Whole blood from a healthy control


title: healthy control sample x072

description: Whole blood from a healthy control


title: Parkinson's disease sample x019


title: healthy control sample x050

description: Whole blood from a healthy control


title: Parkinson's disease sample x020a


title: healthy control sample x058

description: Whole blood from a healthy control


title: Parkinson's disease sample x032


title: Parkinson's disease sample x017a


title: Parkinson's disease sample x029


title: neurological disease control sample x053a


title: Parkinson's disease sample x092


title: Parkinson's disease sample x036


title: Parkinson's disease sample x016


title: Parkinson's disease sample x076


title: Parkinson's disease sample x015


title: Parkinson's disease sample x014


title: Parkinson's disease sample x024


title: Parkinson's disease sample x001


title: healthy control sample x005

description: Whole blood from a healthy control


title: Parkinson's disease sample x012


title: healthy control sample x004

description: Whole blood from a healthy control


title: Parkinson's disease sample x007


title: Parkinson's disease sample x006


title: NSH79 4-1 1wk: S, CEKG2C

status: Public on Dec 15 2006

type: genomic

city: Seattle

first: Nina

middle: Reda

last: Salama

state: WA

address: 1100 Fairview Ave. N

department: Division of Human Biology

country: USA

institute: Fred Hutchinson Cancer Research Center

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45524.gif

hyb_protocol: pubmed ID 17101654

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1710, 11320; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.27; Parameter Scan Time = 16:22:13; Parameter PMT Volts = 450; Parameter Scan Date = 2003-10-07; Parameter Pixel Size = 10; Parameter Laser on time = 33364; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.32; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.27; Parameter Scan Time = 16:22:13; Parameter PMT Volts = 660; Parameter Scan Date = 2003-10-07; Parameter Pixel Size = 10; Parameter Laser on time = 33377; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

data_processing: VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

molecule: genomic DNA

organism: Helicobacter pylori

source_name: mouse NSH79-4 input 1, 2C-S

label_protocol: pubmed ID 17101654

extract_protocol: pubmed ID 17101654

tag: mouse NSH79-4 input 1, 2C-S

source_name: output mouse NSH79 4-1 1wk; S, CEKG2C

tag: output mouse NSH79 4-1 1wk; S, CEKG2C


title: NSH79 3-1 1mo: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45386.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1240, 11240; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.45; Parameter Scan Time = 11:43:08; Parameter PMT Volts = 440; Parameter Scan Date = 2003-10-01; Parameter Pixel Size = 10; Parameter Laser on time = 33115; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.39; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.45; Parameter Scan Time = 11:43:08; Parameter PMT Volts = 500; Parameter Scan Date = 2003-10-01; Parameter Pixel Size = 10; Parameter Laser on time = 33128; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: mouse NSH79-3 input 1, 2C-S

tag: mouse NSH79-3 input 1, 2C-S

source_name: output mouse NSH79 3-1 1mo; S, CEKG2C

tag: output mouse NSH79 3-1 1mo; S, CEKG2C


title: NSH79 3-1 1wk: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45384.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1240, 10920; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 11:32:50; Parameter PMT Volts = 440; Parameter Scan Date = 2003-10-01; Parameter Pixel Size = 10; Parameter Laser on time = 33105; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.40; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 11:32:50; Parameter PMT Volts = 550; Parameter Scan Date = 2003-10-01; Parameter Pixel Size = 10; Parameter Laser on time = 33118; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.80; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 3-1 1wk; S, CEKG2C

tag: output mouse NSH79 3-1 1wk; S, CEKG2C


title: NSH79 4-1 1mo: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45526.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1460, 11480; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.30; Parameter Scan Time = 16:31:31; Parameter PMT Volts = 530; Parameter Scan Date = 2003-10-07; Parameter Pixel Size = 10; Parameter Laser on time = 33373; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.32; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.30; Parameter Scan Time = 16:31:31; Parameter PMT Volts = 570; Parameter Scan Date = 2003-10-07; Parameter Pixel Size = 10; Parameter Laser on time = 33386; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.80; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 4-1 1mo; S, CEKG2C

tag: output mouse NSH79 4-1 1mo; S, CEKG2C


title: NSH79 11-2 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51002.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 680, 34630; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.58; Parameter Scan Time = 11:33:39; Parameter PMT Volts = 330; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44086; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.42; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.58; Parameter Scan Time = 11:33:39; Parameter PMT Volts = 430; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44093; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 11 input 1 S, 2C

tag: NSH79 11 input 1 S, 2C

source_name: output mouse NSH79 11-2 1mo; S, 2C

tag: output mouse NSH79 11-2 1mo; S, 2C


title: NSH79 9-3 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50130.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1930, 8660; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.55; Parameter Scan Time = 10:41:38; Parameter PMT Volts = 430; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41089; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.53; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.55; Parameter Scan Time = 10:41:38; Parameter PMT Volts = 540; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41097; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.82; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 9 input 2 S, 2C

tag: NSH79 9 input 2 S, 2C

source_name: output mouse NSH79 9-3 1mo; S, 2C

tag: output mouse NSH79 9-3 1mo; S, 2C


title: NSH79 4-2 1mo: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45527.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1710, 37770; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.27; Parameter Scan Time = 16:28:26; Parameter PMT Volts = 500; Parameter Scan Date = 2003-10-07; Parameter Pixel Size = 10; Parameter Laser on time = 33371; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.32; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.27; Parameter Scan Time = 16:28:26; Parameter PMT Volts = 600; Parameter Scan Date = 2003-10-07; Parameter Pixel Size = 10; Parameter Laser on time = 33383; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 4-2 1mo; S, CEKG2C

tag: output mouse NSH79 4-2 1mo; S, CEKG2C


title: NSH79 3-2 1wk: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45385.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1320, 37830; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 11:36:05; Parameter PMT Volts = 440; Parameter Scan Date = 2003-10-01; Parameter Pixel Size = 10; Parameter Laser on time = 33108; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.39; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 11:36:05; Parameter PMT Volts = 580; Parameter Scan Date = 2003-10-01; Parameter Pixel Size = 10; Parameter Laser on time = 33120; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 3-2 1wk; S, CEKG2C

tag: output mouse NSH79 3-2 1wk; S, CEKG2C


title: neurological disease control sample x009


title: NSH79 11-1 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51001.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1150, 8200; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.55; Parameter Scan Time = 11:29:03; Parameter PMT Volts = 290; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44081; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.55; Parameter Scan Time = 11:29:03; Parameter PMT Volts = 570; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44089; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 11-1 1mo; S, 2C

tag: output mouse NSH79 11-1 1mo; S, 2C


title: NSH79 8-1 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-05/52456.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1000, 34990; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.67; Parameter Scan Time = 10:29:13; Parameter PMT Volts = 450; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46843; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.67; Parameter Scan Time = 10:29:13; Parameter PMT Volts = 490; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46773; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 8 input 1 S, 2C

tag: NSH79 8 input 1 S, 2C

source_name: output mouse NSH79 8-1 1mo; S, 2C

tag: output mouse NSH79 8-1 1mo; S, 2C


title: NSH79 4-2 1wk: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45525.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1710, 37770; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.24; Parameter Scan Time = 16:25:15; Parameter PMT Volts = 500; Parameter Scan Date = 2003-10-07; Parameter Pixel Size = 10; Parameter Laser on time = 33368; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.33; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.24; Parameter Scan Time = 16:25:15; Parameter PMT Volts = 600; Parameter Scan Date = 2003-10-07; Parameter Pixel Size = 10; Parameter Laser on time = 33380; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 4-2 1wk; S, CEKG2C

tag: output mouse NSH79 4-2 1wk; S, CEKG2C


title: NSH79 2-2 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-05/52457.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1230, 8640; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.70; Parameter Scan Time = 10:34:49; Parameter PMT Volts = 380; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46849; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.70; Parameter Scan Time = 10:34:49; Parameter PMT Volts = 470; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46780; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 2 input 1 S, 2C

tag: NSH79 2 input 1 S, 2C

source_name: output mouse NSH79 2-2 1wk; S, 2C

tag: output mouse NSH79 2-2 1wk; S, 2C


title: NSH79 8-1 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-05/52454.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 930, 34990; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.67; Parameter Scan Time = 10:23:26; Parameter PMT Volts = 450; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46838; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.49; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.67; Parameter Scan Time = 10:23:26; Parameter PMT Volts = 490; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46769; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 8-1 1wk; S, 2C

tag: output mouse NSH79 8-1 1wk; S, 2C


title: NSH79 11-2 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51000.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 680, 34710; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.48; Parameter Scan Time = 11:22:59; Parameter PMT Volts = 320; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44074; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.48; Parameter Scan Time = 11:22:59; Parameter PMT Volts = 460; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44082; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 11-2 1wk; S, 2C

tag: output mouse NSH79 11-2 1wk; S, 2C


title: NSH79 9-4 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50131.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1770, 35320; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.58; Parameter Scan Time = 10:45:24; Parameter PMT Volts = 390; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41093; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.54; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.58; Parameter Scan Time = 10:45:24; Parameter PMT Volts = 530; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41101; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.82; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 9-4 1mo; S, 2C

tag: output mouse NSH79 9-4 1mo; S, 2C


title: NSH79 8-2 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-05/52455.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1320, 8640; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.67; Parameter Scan Time = 10:26:15; Parameter PMT Volts = 450; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46840; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.67; Parameter Scan Time = 10:26:15; Parameter PMT Volts = 490; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46771; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.77; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 8-2 1wk; S, 2C

tag: output mouse NSH79 8-2 1wk; S, 2C


title: NSH79 23-3 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51436.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1620, 8630; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.51; Parameter Scan Time = 11:53:06; Parameter PMT Volts = 440; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45304; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.51; Parameter Scan Time = 11:53:06; Parameter PMT Volts = 470; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45312; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.80; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 23 input 2 S, 2C

tag: NSH79 23 input 2 S, 2C

source_name: output mouse NSH79 23-3 1wk; S, 2C

tag: output mouse NSH79 23-3 1wk; S, 2C


title: NSH79 13-1 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50273.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 610, 8370; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.51; Parameter Scan Time = 10:22:39; Parameter PMT Volts = 450; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42147; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.51; Parameter Scan Time = 10:22:39; Parameter PMT Volts = 580; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42155; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 13 input 1 S, 2C

tag: NSH79 13 input 1 S, 2C

source_name: output mouse NSH79 13-1 1mo; S, 2C

tag: output mouse NSH79 13-1 1mo; S, 2C


title: NSH79 23-1 1wk: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51430.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1760, 8480; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.24; Parameter Scan Time = 11:24:20; Parameter PMT Volts = 490; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45276; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.24; Parameter Scan Time = 11:24:20; Parameter PMT Volts = 550; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45284; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.77; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 23 input 1 N3, 2C

tag: NSH79 23 input 1 N3, 2C

source_name: output mouse NSH79 23-1 1wk; N3, 2C

tag: output mouse NSH79 23-1 1wk; N3, 2C


title: NSH79 13-5 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50275.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 680, 8450; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.58; Parameter Scan Time = 10:34:13; Parameter PMT Volts = 460; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42158; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.35; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.58; Parameter Scan Time = 10:34:13; Parameter PMT Volts = 550; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42166; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.82; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 13 input 3 S, 2C

tag: NSH79 13 input 3 S, 2C

source_name: output mouse NSH79 13-5 1wk; S, 2C

tag: output mouse NSH79 13-5 1wk; S, 2C


title: NSH79 12-4 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50272.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1550, 34520; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.45; Parameter Scan Time = 11:12:02; Parameter PMT Volts = 470; Parameter Scan Date = 2004-03-09; Parameter Pixel Size = 10; Parameter Laser on time = 41382; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.45; Parameter Scan Time = 11:12:02; Parameter PMT Volts = 550; Parameter Scan Date = 2004-03-09; Parameter Pixel Size = 10; Parameter Laser on time = 41390; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.78; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 12 input 2 S, 2C

tag: NSH79 12 input 2 S, 2C

source_name: output mouse NSH79 12-4 1mo; S, 2C

tag: output mouse NSH79 12-4 1mo; S, 2C


title: NSH79 13-6 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50276.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 760, 34720; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.67; Parameter Scan Time = 10:39:42; Parameter PMT Volts = 480; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42164; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.67; Parameter Scan Time = 10:39:42; Parameter PMT Volts = 530; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42172; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.82; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 13-6 1wk; S, 2C

tag: output mouse NSH79 13-6 1wk; S, 2C


title: NSH79 5-2 1mo: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-05/52453.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1160, 8720; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.70; Parameter Scan Time = 10:18:04; Parameter PMT Volts = 480; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46833; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.49; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.70; Parameter Scan Time = 10:18:04; Parameter PMT Volts = 490; Parameter Scan Date = 2004-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 46763; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.77; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 5 input 1 N3, 2C

tag: NSH79 5 input 1 N3, 2C

source_name: output mouse NSH79 5-2 1mo; N3, 2C

tag: output mouse NSH79 5-2 1mo; N3, 2C


title: NSH79 5-2 1mo: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45885.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1380, 38020; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.72; Parameter Scan Time = 12:38:44; Parameter PMT Volts = 550; Parameter Scan Date = 2003-10-18; Parameter Pixel Size = 10; Parameter Laser on time = 34273; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.72; Parameter Scan Time = 12:38:44; Parameter PMT Volts = 660; Parameter Scan Date = 2003-10-18; Parameter Pixel Size = 10; Parameter Laser on time = 34286; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.77; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: mouse NSH79-5 input 1, S-2C

tag: mouse NSH79-5 input 1, S-2C

source_name: output mouse NSH79 5-2 1mo; S, CEKG2C

tag: output mouse NSH79 5-2 1mo; S, CEKG2C


title: NSH79 23-2 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51435.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1940, 35370; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.45; Parameter Scan Time = 11:47:12; Parameter PMT Volts = 440; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45298; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.45; Parameter Scan Time = 11:47:12; Parameter PMT Volts = 670; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45306; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.80; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 23 input 1 S, 2C

tag: NSH79 23 input 1 S, 2C

source_name: output mouse NSH79 23-2 1mo; S, 2C

tag: output mouse NSH79 23-2 1mo; S, 2C


title: NSH79 23-4 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51437.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 2010, 35060; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.55; Parameter Scan Time = 11:56:01; Parameter PMT Volts = 430; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45307; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.55; Parameter Scan Time = 11:56:01; Parameter PMT Volts = 490; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45315; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 23 input 2 S, 2C

tag: NSH79 23 input 2 S, 2C

source_name: output mouse NSH79 23-4 1wk; S, 2C

tag: output mouse NSH79 23-4 1wk; S, 2C


title: NSH79 23-1 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51434.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1780, 8550; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.42; Parameter Scan Time = 11:42:57; Parameter PMT Volts = 440; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45294; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.42; Parameter Scan Time = 11:42:57; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45302; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 23-1 1mo; S, 2C

tag: output mouse NSH79 23-1 1mo; S, 2C


title: NSH79 23-1 1mo: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51431.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 2080, 35150; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.33; Parameter Scan Time = 11:30:20; Parameter PMT Volts = 480; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45281; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.33; Parameter Scan Time = 11:30:20; Parameter PMT Volts = 790; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45289; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.78; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 23-1 1mo; N3, 2C

tag: output mouse NSH79 23-1 1mo; N3, 2C


title: NSH79 23-2 1mo: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51432.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1770, 8790; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.36; Parameter Scan Time = 11:34:58; Parameter PMT Volts = 440; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45286; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.36; Parameter Scan Time = 11:34:58; Parameter PMT Volts = 550; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45294; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 23 input 1 N3, 2C

tag: NSH79 23 input 1 N3, 2C

source_name: output mouse NSH79 23-2 1mo; N3, 2C

tag: output mouse NSH79 23-2 1mo; N3, 2C


title: NSH79 5-1 1mo: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45884.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1150, 11580; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.66; Parameter Scan Time = 12:35:49; Parameter PMT Volts = 550; Parameter Scan Date = 2003-10-18; Parameter Pixel Size = 10; Parameter Laser on time = 34271; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.66; Parameter Scan Time = 12:35:49; Parameter PMT Volts = 640; Parameter Scan Date = 2003-10-18; Parameter Pixel Size = 10; Parameter Laser on time = 34283; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.76; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 5-1 1mo; S, CEKG2C

tag: output mouse NSH79 5-1 1mo; S, CEKG2C


title: NSH79 11-1 1mo: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/50997.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 760, 8370; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.33; Parameter Scan Time = 11:09:42; Parameter PMT Volts = 380; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44061; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.37; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.33; Parameter Scan Time = 11:09:42; Parameter PMT Volts = 600; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44069; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 11 input 1 N3, 2C

tag: NSH79 11 input 1 N3, 2C

source_name: output mouse NSH79 11-1 1mo; N3, 2C

tag: output mouse NSH79 11-1 1mo; N3, 2C


title: NSH79 13-2 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50274.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 840, 34960; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.51; Parameter Scan Time = 10:28:09; Parameter PMT Volts = 360; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42151; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.39; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.51; Parameter Scan Time = 10:28:09; Parameter PMT Volts = 540; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42159; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.82; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 13 input 1 S, 2C

tag: NSH79 13 input 1 S, 2C

source_name: output mouse NSH79 13-2 1mo; S, 2C

tag: output mouse NSH79 13-2 1mo; S, 2C


title: NSH79 11-1 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/50999.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 760, 8360; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.45; Parameter Scan Time = 11:19:22; Parameter PMT Volts = 370; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44071; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.35; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.45; Parameter Scan Time = 11:19:22; Parameter PMT Volts = 480; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44079; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 11 input 1 S, 2C

tag: NSH79 11 input 1 S, 2C

source_name: output mouse NSH79 11-1 1wk; S, 2C

tag: output mouse NSH79 11-1 1wk; S, 2C


title: NSH79 5-1 1wk: S, CEKG2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45883.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1070, 37940; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.57; Parameter Scan Time = 12:29:25; Parameter PMT Volts = 510; Parameter Scan Date = 2003-10-18; Parameter Pixel Size = 10; Parameter Laser on time = 34264; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.57; Parameter Scan Time = 12:29:25; Parameter PMT Volts = 690; Parameter Scan Date = 2003-10-18; Parameter Pixel Size = 10; Parameter Laser on time = 34277; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.76; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: mouse NSH79-5 input 1, S-2C

tag: mouse NSH79-5 input 1, S-2C

source_name: output mouse NSH79 5-1 1wk; S, CEKG2C

tag: output mouse NSH79 5-1 1wk; S, CEKG2C


title: NSH79 12-3 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50270.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1550, 8320; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.33; Parameter Scan Time = 11:06:31; Parameter PMT Volts = 480; Parameter Scan Date = 2004-03-09; Parameter Pixel Size = 10; Parameter Laser on time = 41376; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.33; Parameter Scan Time = 11:06:31; Parameter PMT Volts = 550; Parameter Scan Date = 2004-03-09; Parameter Pixel Size = 10; Parameter Laser on time = 41384; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.78; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 12 input 2 S, 2C

tag: NSH79 12 input 2 S, 2C

source_name: output mouse NSH79 12-3 1mo; S, 2C

tag: output mouse NSH79 12-3 1mo; S, 2C


title: NSH79 23-1 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/51433.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1850, 35140; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 11:38:01; Parameter PMT Volts = 430; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45289; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 11:38:01; Parameter PMT Volts = 580; Parameter Scan Date = 2004-04-28; Parameter Pixel Size = 10; Parameter Laser on time = 45297; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 23 input 1 S, 2C

tag: NSH79 23 input 1 S, 2C

source_name: output mouse NSH79 23-1 1wk; S, 2C

tag: output mouse NSH79 23-1 1wk; S, 2C


title: NSH79 13-1 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50271.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 770, 34950; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.42; Parameter Scan Time = 10:14:35; Parameter PMT Volts = 460; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42138; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.42; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.42; Parameter Scan Time = 10:14:35; Parameter PMT Volts = 480; Parameter Scan Date = 2004-03-12; Parameter Pixel Size = 10; Parameter Laser on time = 42146; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.80; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 13-1 1wk; S, 2C

tag: output mouse NSH79 13-1 1wk; S, 2C


title: NSH79 11-2 1mo: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/50998.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 600, 34480; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 11:14:57; Parameter PMT Volts = 430; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44067; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.45; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 11:14:57; Parameter PMT Volts = 520; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44074; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 11-2 1mo; N3, 2C

tag: output mouse NSH79 11-2 1mo; N3, 2C


title: NSH79 11-1 1wk: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/50995.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 840, 8760; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.18; Parameter Scan Time = 11:00:05; Parameter PMT Volts = 420; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44052; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.18; Parameter Scan Time = 11:00:05; Parameter PMT Volts = 620; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44060; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.80; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 11-1 1wk; N3, 2C

tag: output mouse NSH79 11-1 1wk; N3, 2C


title: NSH79 11-2 1wk: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-04/50996.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 760, 34720; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.24; Parameter Scan Time = 11:04:52; Parameter PMT Volts = 400; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44056; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.42; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.24; Parameter Scan Time = 11:04:52; Parameter PMT Volts = 630; Parameter Scan Date = 2004-04-08; Parameter Pixel Size = 10; Parameter Laser on time = 44064; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.80; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 11-2 1wk; N3, 2C

tag: output mouse NSH79 11-2 1wk; N3, 2C


title: NSH79 9-4 1mo: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50128.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1920, 8740; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 10:34:32; Parameter PMT Volts = 460; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41082; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.54; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.39; Parameter Scan Time = 10:34:32; Parameter PMT Volts = 560; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41089; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.82; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 9 input 2 N3, 2C

tag: NSH79 9 input 2 N3, 2C

source_name: output mouse NSH79 9-4 1mo; N3, 2C

tag: output mouse NSH79 9-4 1mo; N3, 2C


title: NSH79 9-3 1mo: N3, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50127.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1910, 35340; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.33; Parameter Scan Time = 10:29:28; Parameter PMT Volts = 400; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41076; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.33; Parameter Scan Time = 10:29:28; Parameter PMT Volts = 570; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41084; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.81; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 9-3 1mo; N3, 2C

tag: output mouse NSH79 9-3 1mo; N3, 2C


title: NSH79 9-2 1wk: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50123.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1760, 35420; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.18; Parameter Scan Time = 10:16:26; Parameter PMT Volts = 430; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41064; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.18; Parameter Scan Time = 10:16:26; Parameter PMT Volts = 510; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41072; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: NSH79 9 input 1 S, 2C

tag: NSH79 9 input 1 S, 2C

source_name: output mouse NSH79 9-2 1wk; S, 2C

tag: output mouse NSH79 9-2 1wk; S, 2C


title: NSH79 9-1 1mo: S, 2C

description:
Simple annotation: Method testing, Infection
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50124.gif

scan_protocol: pubmed ID 17101654 Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1760, 8830; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: David,,Baldwin Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.21; Parameter Scan Time = 10:19:46; Parameter PMT Volts = 390; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41067; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.0; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.21; Parameter Scan Time = 10:19:46; Parameter PMT Volts = 540; Parameter Scan Date = 2004-03-03; Parameter Pixel Size = 10; Parameter Laser on time = 41075; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Laser Power = 3.79; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: David,,Baldwin

source_name: output mouse NSH79 9-1 1mo; S, 2C

tag: output mouse NSH79 9-1 1mo; S, 2C