title: Expt129 SL6Y 2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-11/57251.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1420, 26760; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.99; Parameter Scan Time = 08:46:42; Parameter PMT Volts = 590; Parameter Scan Date = 2004-11-09; Parameter Pixel Size = 10; Parameter Laser on time = 190042; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.25; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.99; Parameter Scan Time = 08:46:42; Parameter PMT Volts = 690; Parameter Scan Date = 2004-11-09; Parameter Pixel Size = 10; Parameter Laser on time = 189421; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.21; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt150 SL9G 1 amp

status: Public on Jul 17 2007

type: genomic

city: Stanford

last: Stanford Microarray Database

state: CA

address: 300 Pasteur Drive

department: Stanford University, School of Medicine

country: USA

institute: Stanford Microarray Database (SMD)

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59359.gif

hyb_protocol: not provided

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 680, 28010; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.02; Parameter Scan Time = 10:56:07; Parameter PMT Volts = 490; Parameter Scan Date = 2005-02-18; Parameter Pixel Size = 10; Parameter Laser on time = 194371; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.18; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.02; Parameter Scan Time = 10:56:07; Parameter PMT Volts = 710; Parameter Scan Date = 2005-02-18; Parameter Pixel Size = 10; Parameter Laser on time = 194095; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller

data_processing: VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

molecule: genomic DNA

organism: Vibrio cholerae

label_protocol: not provided

extract_protocol: not provided


title: Expt192 W5-91

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66210.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27470; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.67; Parameter Scan Time = 14:32:49; Parameter PMT Volts = 510; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59846; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.14; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.67; Parameter Scan Time = 14:32:49; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205771; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt150 W8G  1 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59357.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 680, 28010; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.12; Parameter Scan Time = 11:14:06; Parameter PMT Volts = 510; Parameter Scan Date = 2005-02-18; Parameter Pixel Size = 10; Parameter Laser on time = 194390; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.21; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.12; Parameter Scan Time = 11:14:06; Parameter PMT Volts = 680; Parameter Scan Date = 2005-02-18; Parameter Pixel Size = 10; Parameter Laser on time = 194114; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt149 E8M  1 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59354.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1160, 26840; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.19; Parameter Scan Time = 16:25:34; Parameter PMT Volts = 580; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 194026; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.19; Parameter Scan Time = 16:25:34; Parameter PMT Volts = 680; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 193713; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.18; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt150 Sa9G 1 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59358.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 680, 28010; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.08; Parameter Scan Time = 11:06:03; Parameter PMT Volts = 510; Parameter Scan Date = 2005-02-18; Parameter Pixel Size = 10; Parameter Laser on time = 194382; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.19; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.08; Parameter Scan Time = 11:06:03; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-18; Parameter Pixel Size = 10; Parameter Laser on time = 194106; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt149 SP7G 1 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59351.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1160, 26840; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.25; Parameter Scan Time = 16:41:07; Parameter PMT Volts = 580; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 194043; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.25; Parameter Scan Time = 16:41:07; Parameter PMT Volts = 670; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 193730; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.18; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SL5-101

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66209.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27470; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.62; Parameter Scan Time = 14:26:56; Parameter PMT Volts = 500; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59841; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.62; Parameter Scan Time = 14:26:56; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205765; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.32; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt129 E7G  1 Amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-11/57246.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1480, 27700; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.63; Parameter Scan Time = 13:31:08; Parameter PMT Volts = 540; Parameter Scan Date = 2004-11-05; Parameter Pixel Size = 10; Parameter Laser on time = 189841; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.55; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.63; Parameter Scan Time = 13:31:08; Parameter PMT Volts = 690; Parameter Scan Date = 2004-11-05; Parameter Pixel Size = 10; Parameter Laser on time = 189220; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.27; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SL6Y

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66205.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27740; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.56; Parameter Scan Time = 14:05:41; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59819; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.56; Parameter Scan Time = 14:05:41; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205744; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.32; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 W8G

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66203.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27880; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.43; Parameter Scan Time = 13:04:58; Parameter PMT Volts = 480; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59759; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.43; Parameter Scan Time = 13:04:58; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205684; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt149 W7G  1 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59353.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1160, 26840; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.17; Parameter Scan Time = 16:32:38; Parameter PMT Volts = 590; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 194034; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.17; Parameter Scan Time = 16:32:38; Parameter PMT Volts = 670; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 193721; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.18; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 PS5-34

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66207.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27470; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.52; Parameter Scan Time = 14:20:58; Parameter PMT Volts = 480; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59835; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.52; Parameter Scan Time = 14:20:58; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205760; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.32; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SP6G

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66206.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27470; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.53; Parameter Scan Time = 14:13:13; Parameter PMT Volts = 500; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59827; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.12; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.53; Parameter Scan Time = 14:13:13; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205752; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.32; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: KLF13 WT/KO thymocytes (767/779)

type: RNA

description:
Simple annotation: Transcription, Knock-out
Image: http://smd.stanford.edu/MicroArray/gifs/2005-10/64835.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 440, 3840; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Meixia,,Zhou Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.56; Parameter Scan Time = 15:50:49; Parameter PMT Volts = 600; Parameter Scan Date = 2005-10-27; Parameter Pixel Size = 10; Parameter Laser on time = 60344; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.51; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Meixia,,Zhou Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.56; Parameter Scan Time = 15:50:49; Parameter PMT Volts = 700; Parameter Scan Date = 2005-10-27; Parameter Pixel Size = 10; Parameter Laser on time = 230596; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.43; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Meixia,,Zhou

molecule: total RNA

organism: Mus musculus

source_name: WT thymocytes

tag: WT thymocytes

source_name: KO thymocytes

tag: KO thymocytes


title: Expt149 Sa7G 2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59350.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1160, 26840; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.39; Parameter Scan Time = 16:51:00; Parameter PMT Volts = 560; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 194053; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.14; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.39; Parameter Scan Time = 16:51:00; Parameter PMT Volts = 660; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 193740; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.19; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SA8G

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66204.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27880; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.54; Parameter Scan Time = 13:14:22; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59768; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.10; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.54; Parameter Scan Time = 13:14:22; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205693; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.32; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SP7G

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66201.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27880; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.19; Parameter Scan Time = 12:50:20; Parameter PMT Volts = 470; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59745; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.19; Parameter Scan Time = 12:50:20; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205669; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt157 SA8G A1 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-03/60460.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1040, 27160; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.95; Parameter Scan Time = 12:10:00; Parameter PMT Volts = 520; Parameter Scan Date = 2005-03-29; Parameter Pixel Size = 10; Parameter Laser on time = 196843; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.25; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.95; Parameter Scan Time = 12:10:00; Parameter PMT Volts = 630; Parameter Scan Date = 2005-03-29; Parameter Pixel Size = 10; Parameter Laser on time = 196560; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller

source_name: SA8G A1

tag: SA8G A1


title: Expt192 Sa7G vs N16961 amp3

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65040.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 480, 26200; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.38; Parameter Scan Time = 15:22:07; Parameter PMT Volts = 490; Parameter Scan Date = 2005-09-23; Parameter Pixel Size = 10; Parameter Laser on time = 202337; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.52; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.38; Parameter Scan Time = 15:22:07; Parameter PMT Volts = 670; Parameter Scan Date = 2005-09-23; Parameter Pixel Size = 10; Parameter Laser on time = 201930; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 W5-21

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66200.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1370, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.86; Parameter Scan Time = 12:10:48; Parameter PMT Volts = 510; Parameter Scan Date = 2005-11-22; Parameter Pixel Size = 10; Parameter Laser on time = 58464; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.51; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.86; Parameter Scan Time = 12:10:48; Parameter PMT Volts = 650; Parameter Scan Date = 2005-11-22; Parameter Pixel Size = 10; Parameter Laser on time = 204389; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt152 E8M  2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59487.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 200, 26760; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.58; Parameter Scan Time = 10:14:12; Parameter PMT Volts = 510; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194936; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.23; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.58; Parameter Scan Time = 10:14:12; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194660; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt152 Sa9G 2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59490.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 170, 28030; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.10; Parameter Scan Time = 10:37:34; Parameter PMT Volts = 490; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194961; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.34; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.10; Parameter Scan Time = 10:37:34; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194685; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.21; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SL9Y vs N16961 amp3

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65043.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 480, 26440; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.66; Parameter Scan Time = 15:57:02; Parameter PMT Volts = 480; Parameter Scan Date = 2005-09-23; Parameter Pixel Size = 10; Parameter Laser on time = 202372; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.55; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.66; Parameter Scan Time = 15:57:02; Parameter PMT Volts = 670; Parameter Scan Date = 2005-09-23; Parameter Pixel Size = 10; Parameter Laser on time = 201964; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt152 W8G  2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59489.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 170, 27290; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.00; Parameter Scan Time = 10:30:25; Parameter PMT Volts = 500; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194953; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.33; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.00; Parameter Scan Time = 10:30:25; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194677; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt149 SL5Y 2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59349.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1160, 26840; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.52; Parameter Scan Time = 17:06:25; Parameter PMT Volts = 560; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 194068; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.15; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.52; Parameter Scan Time = 17:06:25; Parameter PMT Volts = 660; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 193756; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.19; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SL4G vs N16961amp3

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65041.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 480, 26440; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.52; Parameter Scan Time = 15:34:50; Parameter PMT Volts = 490; Parameter Scan Date = 2005-09-23; Parameter Pixel Size = 10; Parameter Laser on time = 202348; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.51; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.52; Parameter Scan Time = 15:34:50; Parameter PMT Volts = 670; Parameter Scan Date = 2005-09-23; Parameter Pixel Size = 10; Parameter Laser on time = 201941; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt166 E5 - 64B amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62060.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 760, 28200; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.22; Parameter Scan Time = 13:32:54; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199996; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.17; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.22; Parameter Scan Time = 13:32:54; Parameter PMT Volts = 670; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199557; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt149 SL4G 2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59347.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1090, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.51; Parameter Scan Time = 17:13:13; Parameter PMT Volts = 560; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 194075; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.15; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.51; Parameter Scan Time = 17:13:13; Parameter PMT Volts = 680; Parameter Scan Date = 2005-02-15; Parameter Pixel Size = 10; Parameter Laser on time = 193762; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.19; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 W7G

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66202.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27880; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.25; Parameter Scan Time = 12:56:08; Parameter PMT Volts = 470; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 59750; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.09; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.25; Parameter Scan Time = 12:56:08; Parameter PMT Volts = 610; Parameter Scan Date = 2005-12-21; Parameter Pixel Size = 10; Parameter Laser on time = 205675; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt152 Sp7G 2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59485.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 440, 27360; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 38.90; Parameter Scan Time = 09:01:16; Parameter PMT Volts = 520; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194884; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 38.90; Parameter Scan Time = 09:01:16; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194608; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt157 SP6G A amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-03/60459.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1410, 27300; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.62; Parameter Scan Time = 14:43:59; Parameter PMT Volts = 520; Parameter Scan Date = 2005-03-29; Parameter Pixel Size = 10; Parameter Laser on time = 196997; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.62; Parameter Scan Time = 14:43:59; Parameter PMT Volts = 650; Parameter Scan Date = 2005-03-29; Parameter Pixel Size = 10; Parameter Laser on time = 196714; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.23; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller

source_name: SP6G A

tag: SP6G A


title: Expt192 N16961 vs N16961 amp1

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65037.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 860, 27420; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.36; Parameter Scan Time = 12:57:20; Parameter PMT Volts = 520; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 202208; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.30; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.36; Parameter Scan Time = 12:57:20; Parameter PMT Volts = 670; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 201800; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 MO30 vs N16961 amp1

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65035.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 860, 27790; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.08; Parameter Scan Time = 12:26:57; Parameter PMT Volts = 500; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 202178; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.28; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.08; Parameter Scan Time = 12:26:57; Parameter PMT Volts = 680; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 201770; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 O395 vs N16961 amp1

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65034.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 840, 27720; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.84; Parameter Scan Time = 11:59:26; Parameter PMT Volts = 500; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 202150; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.27; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.84; Parameter Scan Time = 11:59:26; Parameter PMT Volts = 660; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 201742; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 A1552 vs N16961 amp1

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65033.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 840, 27720; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 11:50:41; Parameter PMT Volts = 500; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 202141; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.26; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 11:50:41; Parameter PMT Volts = 670; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 201733; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt152 W7G  2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59486.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 440, 27360; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.00; Parameter Scan Time = 09:07:28; Parameter PMT Volts = 500; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194890; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.00; Parameter Scan Time = 09:07:28; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-25; Parameter Pixel Size = 10; Parameter Laser on time = 194614; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt152 SL5Y 1 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59484.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 370, 27400; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 12:35:06; Parameter PMT Volts = 480; Parameter Scan Date = 2005-02-24; Parameter Pixel Size = 10; Parameter Laser on time = 194846; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.41; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 12:35:06; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-24; Parameter Pixel Size = 10; Parameter Laser on time = 194570; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.23; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt166 Sa4 - 82B amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62054.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 950, 27030; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.59; Parameter Scan Time = 14:39:12; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 200060; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.25; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.59; Parameter Scan Time = 14:39:12; Parameter PMT Volts = 680; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199622; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.22; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt166 Sa5 - 95B amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62058.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 720, 27810; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.34; Parameter Scan Time = 13:45:07; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 200008; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.19; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.34; Parameter Scan Time = 13:45:07; Parameter PMT Volts = 670; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199569; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt166 SL4 - 41B amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62052.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 790, 27070; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.67; Parameter Scan Time = 14:52:49; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 200074; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.26; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.67; Parameter Scan Time = 14:52:49; Parameter PMT Volts = 680; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199635; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.22; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 E7G vs N16961 amp3

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65032.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 860, 27420; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.19; Parameter Scan Time = 12:37:20; Parameter PMT Volts = 510; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 202189; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.28; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.19; Parameter Scan Time = 12:37:20; Parameter PMT Volts = 690; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 201781; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt166 W5 - 21B amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62056.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 700, 27400; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.39; Parameter Scan Time = 14:13:41; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 200035; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.23; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.39; Parameter Scan Time = 14:13:41; Parameter PMT Volts = 680; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199596; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.21; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 Sa8M rr

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2006-02/66694.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1160, 27520; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.10; Parameter Scan Time = 11:29:12; Parameter PMT Volts = 550; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 60623; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.04; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.10; Parameter Scan Time = 11:29:12; Parameter PMT Volts = 740; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 206550; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.29; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt157 SL6Y A amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-03/60458.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1410, 27300; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.58; Parameter Scan Time = 14:34:55; Parameter PMT Volts = 520; Parameter Scan Date = 2005-03-29; Parameter Pixel Size = 10; Parameter Laser on time = 196987; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.58; Parameter Scan Time = 14:34:55; Parameter PMT Volts = 630; Parameter Scan Date = 2005-03-29; Parameter Pixel Size = 10; Parameter Laser on time = 196704; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.23; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller

source_name: SL6Y A

tag: SL6Y A


title: Expt166 Sa5 - 33B amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62059.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 720, 27810; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.31; Parameter Scan Time = 13:40:04; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 200002; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.19; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.31; Parameter Scan Time = 13:40:04; Parameter PMT Volts = 670; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199563; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt166 SL5 - 101B amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62057.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 720, 27810; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.27; Parameter Scan Time = 14:08:06; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 200029; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.22; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.27; Parameter Scan Time = 14:08:06; Parameter PMT Volts = 680; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199590; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.21; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt166 Sa4 - 82A amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62055.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 700, 27400; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.50; Parameter Scan Time = 14:28:34; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 200049; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.25; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.50; Parameter Scan Time = 14:28:34; Parameter PMT Volts = 680; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199610; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.22; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 W9G rr

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2006-02/66698.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1260, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.88; Parameter Scan Time = 12:49:26; Parameter PMT Volts = 510; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 60703; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.17; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.88; Parameter Scan Time = 12:49:26; Parameter PMT Volts = 670; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 206630; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.31; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt166 SL4 - 31B amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62053.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 930, 26910; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.63; Parameter Scan Time = 14:45:21; Parameter PMT Volts = 510; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 200066; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.25; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.63; Parameter Scan Time = 14:45:21; Parameter PMT Volts = 680; Parameter Scan Date = 2005-06-23; Parameter Pixel Size = 10; Parameter Laser on time = 199627; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.22; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SO8 rr

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2006-02/66697.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1260, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.79; Parameter Scan Time = 12:38:55; Parameter PMT Volts = 510; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 60693; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.18; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.79; Parameter Scan Time = 12:38:55; Parameter PMT Volts = 670; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 206620; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.31; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 W6G rr

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2006-02/66699.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1260, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.93; Parameter Scan Time = 12:57:22; Parameter PMT Volts = 510; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 60712; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.17; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.93; Parameter Scan Time = 12:57:22; Parameter PMT Volts = 670; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 206639; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.31; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt152 Sa3G 2 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59481.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 640, 27440; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.58; Parameter Scan Time = 12:06:07; Parameter PMT Volts = 490; Parameter Scan Date = 2005-02-24; Parameter Pixel Size = 10; Parameter Laser on time = 194817; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.39; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.58; Parameter Scan Time = 12:06:07; Parameter PMT Volts = 680; Parameter Scan Date = 2005-02-24; Parameter Pixel Size = 10; Parameter Laser on time = 194541; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.23; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt152 Sa3G 1 amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-02/59480.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 640, 27440; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.50; Parameter Scan Time = 11:56:30; Parameter PMT Volts = 480; Parameter Scan Date = 2005-02-24; Parameter Pixel Size = 10; Parameter Laser on time = 194808; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.50; Parameter Scan Time = 11:56:30; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-24; Parameter Pixel Size = 10; Parameter Laser on time = 194532; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.22; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SA5-33

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66198.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1640, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.74; Parameter Scan Time = 11:57:10; Parameter PMT Volts = 500; Parameter Scan Date = 2005-11-22; Parameter Pixel Size = 10; Parameter Laser on time = 58450; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.74; Parameter Scan Time = 11:57:10; Parameter PMT Volts = 650; Parameter Scan Date = 2005-11-22; Parameter Pixel Size = 10; Parameter Laser on time = 204375; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 Sa7G rr

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2006-02/66695.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1260, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.32; Parameter Scan Time = 11:49:34; Parameter PMT Volts = 510; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 60643; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.04; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.32; Parameter Scan Time = 11:49:34; Parameter PMT Volts = 670; Parameter Scan Date = 2006-02-02; Parameter Pixel Size = 10; Parameter Laser on time = 206571; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.29; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 SA5-95

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66199.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1640, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.76; Parameter Scan Time = 12:02:55; Parameter PMT Volts = 510; Parameter Scan Date = 2005-11-22; Parameter Pixel Size = 10; Parameter Laser on time = 58456; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.36; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 39.76; Parameter Scan Time = 12:02:55; Parameter PMT Volts = 650; Parameter Scan Date = 2005-11-22; Parameter Pixel Size = 10; Parameter Laser on time = 204381; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt165 SL4 - 31A amp

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62050.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1270, 27390; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.69; Parameter Scan Time = 10:09:38; Parameter PMT Volts = 500; Parameter Scan Date = 2005-06-21; Parameter Pixel Size = 10; Parameter Laser on time = 199900; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.30; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.69; Parameter Scan Time = 10:09:38; Parameter PMT Volts = 700; Parameter Scan Date = 2005-06-21; Parameter Pixel Size = 10; Parameter Laser on time = 199461; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller


title: Expt192 L6 vs N16961 amp3

description:
Simple annotation: Genome comparison, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2005-11/65036.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 860, 27420; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Michael,,Miller Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.30; Parameter Scan Time = 12:49:25; Parameter PMT Volts = 510; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 202199; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.29; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.30; Parameter Scan Time = 12:49:25; Parameter PMT Volts = 680; Parameter Scan Date = 2005-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 201791; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Michael,,Miller