title: CB512-DNA-A1552 vs. VC73-orf6/7-Kan A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70350.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 670, 27060; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.06; Parameter Scan Time = 10:14:14; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 64002; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.63; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.06; Parameter Scan Time = 10:14:14; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 209929; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.43; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB464- DNA; A1552 vs.  AIO37-Kan#5

status: Public on Apr 26 2007

type: genomic

city: Stanford

first: Melanie

last: Blokesch

state: CA

address: 279 Campus Drive

department: Medical School

country: USA

institute: Stanford University

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70431.gif

hyb_protocol: not provided

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 960, 27680; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.27; Parameter Scan Time = 11:58:36; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-22; Parameter Pixel Size = 10; Parameter Laser on time = 64121; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.69; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.27; Parameter Scan Time = 11:58:36; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-22; Parameter Pixel Size = 10; Parameter Laser on time = 210048; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.46; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch

data_processing: VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

molecule: genomic DNA

organism: Vibrio cholerae

label_protocol: not provided

extract_protocol: not provided


title: CA1100- DNA; A1552 vs. AIIIO37-Kan#22

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70509.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 670, 27860; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.78; Parameter Scan Time = 11:27:05; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64461; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.78; Parameter Scan Time = 11:27:05; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210388; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_NCC_RCyP+_C01_B1

status: Public on May 25 2007

type: RNA

city: Santa Clara

first: Thomas

middle: R

last: Gingeras

address: 3380 Central Expressway

institute: Affymetrix, Inc.

description: See publication for details

hyb_protocol: See publication for details

scan_protocol: See publication for details

data_processing: See publication for details

label: biotin

molecule: polyA RNA

organism: Homo sapiens

source_name: Total RNA from NCCIT cell line

label_protocol: See publication for details

extract_protocol: Long RNA protocol - see publication for details

tag: See publication for details


title: CA1099- DNA; A1552 vs. AIIIO37-Kan#18

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70508.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 670, 27860; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.75; Parameter Scan Time = 11:21:27; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64456; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.75; Parameter Scan Time = 11:21:27; Parameter PMT Volts = 710; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210383; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB498- DNA; A1552 vs.  AIO37-Kan#10

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70430.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 700, 27730; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.42; Parameter Scan Time = 12:19:36; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-22; Parameter Pixel Size = 10; Parameter Laser on time = 64142; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.72; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.42; Parameter Scan Time = 12:19:36; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-22; Parameter Pixel Size = 10; Parameter Laser on time = 210069; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.47; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_PC3_RCyP+_C79_B1

description: See publication for details

source_name: Total RNA from PC3 cell line


title: P3_AS_U87_RCyP+_C79_B1

description: See publication for details

source_name: Total RNA from U87MG cell line


title: P3_AS_Jur_RCyP+_C89_B1

description: See publication for details

source_name: Total RNA from Jurkat cell line


title: P3_AS_NCC_RCyP+_C89_B1

description: See publication for details


title: CA1005- DNA; A1552 vs. AIIIO37-Kan#22

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70510.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1090, 27350; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.85; Parameter Scan Time = 11:36:32; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64470; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.85; Parameter Scan Time = 11:36:32; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210397; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1066 - DNA; A1552 vs. AIIIHSGC#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66071.gif
Strain Name: AIIIHSGC#6 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27390; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.94; Parameter Scan Time = 13:16:19; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 59575; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.59; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.94; Parameter Scan Time = 13:16:19; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 205500; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1132 - DNA; A1552 vs. AIIHSGC#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66056.gif
Strain Name: AIIHSGC#5

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 460, 27640; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.75; Parameter Scan Time = 16:42:25; Parameter PMT Volts = 500; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59437; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.59; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.75; Parameter Scan Time = 16:42:25; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205362; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1131 - DNA; A1552 vs. AIIHSGC#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66055.gif
Strain Name: AIIHSGC#4  - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 310, 27350; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.70; Parameter Scan Time = 16:29:10; Parameter PMT Volts = 500; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59424; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.60; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.70; Parameter Scan Time = 16:29:10; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205349; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1133 - DNA; A1552 vs. AIIHSGC#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66057.gif
Strain Name: AIIHSGC#5 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 480, 27900; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.82; Parameter Scan Time = 16:50:41; Parameter PMT Volts = 530; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59445; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.58; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.82; Parameter Scan Time = 16:50:41; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205370; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1064 - DNA; A1552 vs. AIIIHSGC#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66069.gif
Strain Name: AIIIHSGC#5 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27790; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 12:55:03; Parameter PMT Volts = 530; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 59554; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.64; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 12:55:03; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 205478; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1063 - DNA; A1552 vs. AIIIHSGC#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66068.gif
Strain Name: AIIIHSGC#5

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27790; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.73; Parameter Scan Time = 12:47:54; Parameter PMT Volts = 530; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 59547; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.61; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.73; Parameter Scan Time = 12:47:54; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 205472; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1061 - DNA; A1552 vs. AIIIHSGC#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66066.gif
Strain Name: AIIIHSGC#4

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 880, 27790; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.64; Parameter Scan Time = 12:33:23; Parameter PMT Volts = 530; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 59532; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.61; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.64; Parameter Scan Time = 12:33:23; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 205457; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_NCC_RCyP+_C79_B1

description: See publication for details


title: CA1065 - DNA; A1552 vs. AIIIHSGC#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66070.gif
Strain Name: AIIIHSGC#6

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27390; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 13:01:36; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 59560; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.58; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 13:01:36; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 205485; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_HepG2_RNuP+_C89_B1

description: See publication for details

source_name: Total Nuclear RNA from HepG2 cell line


title: CA1062 - DNA; A1552 vs. AIIIHSGC#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66067.gif
Strain Name: AIIIHSGC#4 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27920; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.71; Parameter Scan Time = 12:40:28; Parameter PMT Volts = 530; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 59539; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.61; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.71; Parameter Scan Time = 12:40:28; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 205464; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1130 - DNA; A1552 vs. AIIHSGC#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66054.gif
Strain Name: AIIHSGC#4

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 310, 27830; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.62; Parameter Scan Time = 16:15:45; Parameter PMT Volts = 490; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59411; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.60; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.62; Parameter Scan Time = 16:15:45; Parameter PMT Volts = 750; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205336; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_HepG2_RNuP+_C01_B1

description: See publication for details


title: CA1121 - DNA; A1552 vs. AHSGC#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66045.gif
Strain Name: AHSGC#6 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.13; Parameter Scan Time = 12:57:36; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59301; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.63; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.13; Parameter Scan Time = 12:57:36; Parameter PMT Volts = 680; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205226; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_Jur_RCyP+_C01_B1

description: See publication for details


title: P3_AS_HepG2_RNuP+_C79_B1

description: See publication for details


title: CA1116 - DNA; A1552 vs. AHSGC#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66040.gif
Strain Name: AHSGC#4

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.88; Parameter Scan Time = 12:24:10; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59268; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.63; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.88; Parameter Scan Time = 12:24:10; Parameter PMT Volts = 680; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205193; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1119 - DNA; A1552 vs. AHSGC#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66043.gif
Strain Name: AHSGC#5 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.08; Parameter Scan Time = 12:45:49; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59289; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.64; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.08; Parameter Scan Time = 12:45:49; Parameter PMT Volts = 680; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205214; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1117 - DNA; A1552 vs. AHSGC#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66041.gif
Strain Name: AHSGC#4 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.98; Parameter Scan Time = 12:32:16; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59276; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.67; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.98; Parameter Scan Time = 12:32:16; Parameter PMT Volts = 680; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205200; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1134 - DNA; A1552 vs. AIIHSGC#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66058.gif
Strain Name: AIIHSGC#6

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 430, 27660; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 16:58:24; Parameter PMT Volts = 490; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59453; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.58; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.83; Parameter Scan Time = 16:58:24; Parameter PMT Volts = 750; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205378; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1135 - DNA; A1552 vs. AIIHSGC#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66059.gif
Strain Name: AIIHSGC#6 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 430, 27730; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.87; Parameter Scan Time = 17:03:32; Parameter PMT Volts = 520; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59459; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.57; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.87; Parameter Scan Time = 17:03:32; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205384; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1120 - DNA; A1552 vs. AHSGC#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66044.gif
Strain Name: AHSGC#6

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.07; Parameter Scan Time = 12:53:05; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59297; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.63; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.07; Parameter Scan Time = 12:53:05; Parameter PMT Volts = 680; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205222; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1118 - DNA; A1552 vs. AHSGC#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66042.gif
Strain Name: AHSGC#5

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.03; Parameter Scan Time = 12:40:43; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59283; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.64; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.03; Parameter Scan Time = 12:40:43; Parameter PMT Volts = 680; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205208; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_Jur_RCyP+_C79_B1

description: See publication for details

scan_protocol: See publication for details


title: CB526- DNA; A1552 vs. AIVpO37#3A

status: Public on Apr 25 2007

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70495.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 470, 27170; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.27; Parameter Scan Time = 10:39:45; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64413; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.27; Parameter Scan Time = 10:39:45; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210340; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB527- DNA; A1552 vs. AIVpO37#3A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70496.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 470, 27170; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.39; Parameter Scan Time = 10:46:28; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64420; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.45; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.39; Parameter Scan Time = 10:46:28; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210347; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB525- DNA; A1552 vs. AIVpO37#1A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70492.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 470, 27270; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.24; Parameter Scan Time = 10:34:58; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64409; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.24; Parameter Scan Time = 10:34:58; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210336; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB499- DNA; A1552 vs. AIIpO37#9

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70457.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 690, 28340; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.86; Parameter Scan Time = 11:59:23; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 64244; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.37; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.86; Parameter Scan Time = 11:59:23; Parameter PMT Volts = 730; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 210171; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB531- DNA; A1552 vs. AIIpO37#13

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70459.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 480, 27440; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.91; Parameter Scan Time = 12:09:14; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 64254; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.91; Parameter Scan Time = 12:09:14; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 210181; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB500- DNA; A1552 vs. AIIpO37#9

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70458.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 740, 27900; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.88; Parameter Scan Time = 12:04:01; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 64248; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.37; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.88; Parameter Scan Time = 12:04:01; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 210175; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB520- DNA; A1552 vs.  AIpO37#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70358.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 430, 27270; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.22; Parameter Scan Time = 11:52:00; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 64068; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.46; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.22; Parameter Scan Time = 11:52:00; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 209995; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB532- DNA; A1552 vs. AIIpO37#13

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70460.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 520, 27880; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.01; Parameter Scan Time = 12:17:59; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 64263; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.01; Parameter Scan Time = 12:17:59; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 210190; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB521- DNA; A1552 vs.  AIpO37#8

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70359.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 540, 27020; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.27; Parameter Scan Time = 11:58:09; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 64074; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.47; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.27; Parameter Scan Time = 11:58:09; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 210001; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB534- DNA; A1552 vs. AIIpO37#16

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70462.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 28180; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.16; Parameter Scan Time = 12:31:55; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 64276; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.40; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.16; Parameter Scan Time = 12:31:55; Parameter PMT Volts = 730; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 210203; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB518- DNA; A1552 vs.  AIpO37#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70356.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 400, 26930; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.04; Parameter Scan Time = 11:36:30; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 64053; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.04; Parameter Scan Time = 11:36:30; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 209980; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB533- DNA; A1552 vs. AIIpO37#16

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70461.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 540, 28020; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.11; Parameter Scan Time = 12:26:03; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 64270; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.39; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.11; Parameter Scan Time = 12:26:03; Parameter PMT Volts = 730; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 210197; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB536- DNA; A1552 vs. AIIIpO37#9A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70464.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27830; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.36; Parameter Scan Time = 12:52:45; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 64297; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.36; Parameter Scan Time = 12:52:45; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 210224; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB516- DNA; A1552 vs.  AIpO37#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70354.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 580, 26810; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.80; Parameter Scan Time = 11:21:17; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 64037; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.42; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.80; Parameter Scan Time = 11:21:17; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 209964; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB517- DNA; A1552 vs.  AIpO37#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70355.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 310, 26900; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.92; Parameter Scan Time = 11:28:01; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 64044; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.92; Parameter Scan Time = 11:28:01; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 209971; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB509-DNA-A1552 vs. ATCC25872

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70347.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 620, 27620; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.80; Parameter Scan Time = 09:54:58; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 63983; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.52; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.80; Parameter Scan Time = 09:54:58; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-20; Parameter Pixel Size = 10; Parameter Laser on time = 209911; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_HepG2_RCyP+_C79_B1

description: See publication for details

scan_protocol: See publication for details

source_name: Total Cytoplasmic RNA from HepG2 cell line


title: CB530- DNA; A1552 vs. AIVpO37#8A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70502.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 320, 27370; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.59; Parameter Scan Time = 11:06:28; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64440; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.47; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.59; Parameter Scan Time = 11:06:28; Parameter PMT Volts = 710; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210367; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB522- DNA; A1552 vs.  AIpO37#8

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70360.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 540, 27390; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.39; Parameter Scan Time = 12:08:40; Parameter PMT Volts = 540; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 64084; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.47; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.39; Parameter Scan Time = 12:08:40; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 210011; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB503-DNA-A1552 vs. ATCC25872

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70244.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 700, 27950; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.90; Parameter Scan Time = 10:47:14; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-15; Parameter Pixel Size = 10; Parameter Laser on time = 63931; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.58; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.90; Parameter Scan Time = 10:47:14; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-15; Parameter Pixel Size = 10; Parameter Laser on time = 209858; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.42; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_HeLaS3_RNuP+_C79_B1

description: See publication for details

source_name: Total Nuclear RNA from HeLa cell line


title: P3_AS_HepG2_RCyP+_C01_B1

description: See publication for details


title: CB529- DNA; A1552 vs. AIVpO37#4A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70500.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 300, 27370; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.51; Parameter Scan Time = 10:59:29; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64433; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.46; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.51; Parameter Scan Time = 10:59:29; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210361; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB504-DNA-A1552 vs. ATCC25872

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70245.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 650, 27760; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.02; Parameter Scan Time = 10:54:22; Parameter PMT Volts = 510; Parameter Scan Date = 2006-09-15; Parameter Pixel Size = 10; Parameter Laser on time = 63940; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.61; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.02; Parameter Scan Time = 10:54:22; Parameter PMT Volts = 730; Parameter Scan Date = 2006-09-15; Parameter Pixel Size = 10; Parameter Laser on time = 209867; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.43; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_HeLaS3_RCyP+_C79_B1

description: See publication for details

source_name: Total Cytoplasmic RNA from HeLa cell line


title: CB481- DNA; A1552 vs.  AIIIpO139#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69479.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 960, 27480; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.79; Parameter Scan Time = 11:07:37; Parameter PMT Volts = 530; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 62810; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.27; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.79; Parameter Scan Time = 11:07:37; Parameter PMT Volts = 720; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 208737; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB487- DNA; A1552 vs.  AIIIpO139#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69485.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27900; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.45; Parameter Scan Time = 11:47:33; Parameter PMT Volts = 530; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 62851; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.45; Parameter Scan Time = 11:47:33; Parameter PMT Volts = 720; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 208778; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB528- DNA; A1552 vs. AIVpO37#4A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70498.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 420, 27410; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.43; Parameter Scan Time = 10:51:11; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64426; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.45; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.43; Parameter Scan Time = 10:51:11; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210353; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB488- DNA; A1552 vs.  AIIIpO139#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69486.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 950, 27580; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.60; Parameter Scan Time = 11:58:53; Parameter PMT Volts = 530; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 62862; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.35; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.60; Parameter Scan Time = 11:58:53; Parameter PMT Volts = 720; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 208789; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB515- DNA; A1552 vs.  AIpO37#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70353.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 530, 27150; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.70; Parameter Scan Time = 11:15:54; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 64031; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.41; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.70; Parameter Scan Time = 11:15:54; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 209959; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB484- DNA; A1552 vs.  AIIIpO139#3

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69482.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27850; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.15; Parameter Scan Time = 11:27:51; Parameter PMT Volts = 530; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 62831; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.15; Parameter Scan Time = 11:27:51; Parameter PMT Volts = 720; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 208758; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB486- DNA; A1552 vs.  AIIIpO139#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69484.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 880, 27620; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.37; Parameter Scan Time = 11:42:11; Parameter PMT Volts = 530; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 62846; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.37; Parameter Scan Time = 11:42:11; Parameter PMT Volts = 720; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 208773; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB524- DNA; A1552 vs. AIVpO37#1A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70490.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 550, 27270; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.09; Parameter Scan Time = 10:26:50; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64401; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.35; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.09; Parameter Scan Time = 10:26:50; Parameter PMT Volts = 710; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210328; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB485- DNA; A1552 vs.  AIIIpO139#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69483.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 880, 27620; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.24; Parameter Scan Time = 11:35:04; Parameter PMT Volts = 530; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 62838; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.37; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.24; Parameter Scan Time = 11:35:04; Parameter PMT Volts = 730; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 208765; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB495- DNA; A1552 vs.  AIVpO139#8

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69548.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 760, 27810; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.17; Parameter Scan Time = 12:08:05; Parameter PMT Volts = 510; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 63122; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.39; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.17; Parameter Scan Time = 12:08:05; Parameter PMT Volts = 740; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 209050; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB535- DNA; A1552 vs. AIIIpO37#9A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70463.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27830; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.25; Parameter Scan Time = 12:40:50; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 64285; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.41; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.25; Parameter Scan Time = 12:40:50; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 210212; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.39; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB482- DNA; A1552 vs.  AIIIpO139#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69480.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 990, 27290; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.95; Parameter Scan Time = 11:14:19; Parameter PMT Volts = 530; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 62818; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.29; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.95; Parameter Scan Time = 11:14:19; Parameter PMT Volts = 720; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 208745; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch