title: Tumor_283

description:
Simple annotation: Liver, tumor tissue
Image: http://smd.stanford.edu/MicroArray/gifs/2006-12/71351.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 4760; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Adam,,Adler Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.57; Parameter Scan Time = 13:58:15; Parameter PMT Volts = 550; Parameter Scan Date = 2006-12-06; Parameter Pixel Size = 10; Parameter Laser on time = 15868; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.49; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.2; Parameter Scanning software = AxImageIO; Performer: Adam,,Adler Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.57; Parameter Scan Time = 13:58:15; Parameter PMT Volts = 610; Parameter Scan Date = 2006-12-06; Parameter Pixel Size = 10; Parameter Laser on time = 258617; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [84947]; Parameter Laser Power = 3.50; Parameter Scanning software version = 2.0.3.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Adam,,Adler

source_name: Universal Human Reference

tag: Universal Human Reference


title: 96PB1

status: Public on Aug 09 2007

type: RNA

city: Stanford

last: Stanford Microarray Database

state: CA

address: 300 Pasteur Drive

department: Stanford University, School of Medicine

country: USA

institute: Stanford Microarray Database (SMD)

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62439.gif

hyb_protocol: not provided

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1840, 5080; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.87; Parameter Scan Time = 12:49:27; Parameter PMT Volts = 580; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68841; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.73; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.87; Parameter Scan Time = 12:49:27; Parameter PMT Volts = 700; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68802; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.26; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

data_processing: VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

molecule: total RNA

organism: Homo sapiens

source_name: aCR (Stratagene)

label_protocol: not provided

extract_protocol: not provided

tag: aCR (Stratagene)

source_name: 96PB1; Sample source=PB; CBF group=inv(16)


title: 96PB373

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62437.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 5160; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.63; Parameter Scan Time = 13:58:27; Parameter PMT Volts = 600; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68906; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.73; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.63; Parameter Scan Time = 13:58:27; Parameter PMT Volts = 720; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68867; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.29; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 96PB373; Sample source=PB; CBF group=inv(16)


title: HelatTaCy5 vs BAT3SCy3

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49842.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 4680; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 28.13; Parameter Scan Time = 16:50:10; Parameter PMT Volts = 620; Parameter Scan Date = 2004-02-24; Parameter Pixel Size = 10; Parameter Laser on time = 30297; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.29; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 28.13; Parameter Scan Time = 16:50:10; Parameter PMT Volts = 720; Parameter Scan Date = 2004-02-24; Parameter Pixel Size = 10; Parameter Laser on time = 62521; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.43; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: HelatTa

tag: HelatTa


title: BAT3ACy3 vs BAT3ADoxCy5

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49580.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1640, 4640; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.21; Parameter Scan Time = 15:14:23; Parameter PMT Volts = 620; Parameter Scan Date = 2004-02-19; Parameter Pixel Size = 10; Parameter Laser on time = 29841; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.31; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.21; Parameter Scan Time = 15:14:23; Parameter PMT Volts = 750; Parameter Scan Date = 2004-02-19; Parameter Pixel Size = 10; Parameter Laser on time = 62065; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.34; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: BAT3SCy3 vs BAT3SDoxCy5

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49582.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1560, 4160; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.44; Parameter Scan Time = 16:51:36; Parameter PMT Volts = 620; Parameter Scan Date = 2004-02-19; Parameter Pixel Size = 10; Parameter Laser on time = 29874; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.27; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.44; Parameter Scan Time = 16:51:36; Parameter PMT Volts = 750; Parameter Scan Date = 2004-02-19; Parameter Pixel Size = 10; Parameter Laser on time = 62097; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.43; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: BAT3ACy5 vs BAT3ADoxCy3

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49581.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1640, 5200; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.79; Parameter Scan Time = 15:27:34; Parameter PMT Volts = 660; Parameter Scan Date = 2004-02-19; Parameter Pixel Size = 10; Parameter Laser on time = 29855; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.31; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.79; Parameter Scan Time = 15:27:34; Parameter PMT Volts = 730; Parameter Scan Date = 2004-02-19; Parameter Pixel Size = 10; Parameter Laser on time = 62078; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.36; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: 00PB369

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/42646.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1560, 7280; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.09; Parameter Scan Time = 03:49:38; Parameter PMT Volts = 600; Parameter Scan Date = 2003-05-31; Parameter Pixel Size = 10; Parameter Laser on time = 90944; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.11; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.09; Parameter Scan Time = 03:49:38; Parameter PMT Volts = 750; Parameter Scan Date = 2003-05-31; Parameter Pixel Size = 10; Parameter Laser on time = 309937; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 3.06; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: CRH

tag: CRH

source_name: 00PB369; Sample source=PB; CBF group=inv(16)


title: 00KM1115

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/42750.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1440, 7640; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.93; Parameter Scan Time = 22:47:20; Parameter PMT Volts = 600; Parameter Scan Date = 2003-07-03; Parameter Pixel Size = 10; Parameter Laser on time = 100191; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.55; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.93; Parameter Scan Time = 22:47:20; Parameter PMT Volts = 710; Parameter Scan Date = 2003-07-03; Parameter Pixel Size = 10; Parameter Laser on time = 319184; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.92; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 00KM1115; Sample source=BM; CBF group=inv(16)


title: 00PB290

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-05/61386.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1800, 5440; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.11; Parameter Scan Time = 10:26:11; Parameter PMT Volts = 610; Parameter Scan Date = 2005-02-01; Parameter Pixel Size = 10; Parameter Laser on time = 73363; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.77; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.11; Parameter Scan Time = 10:26:11; Parameter PMT Volts = 690; Parameter Scan Date = 2005-02-01; Parameter Pixel Size = 10; Parameter Laser on time = 73324; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.25; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 00PB290; Sample source=PB; CBF group=inv(16)


title: 01PB2546

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62438.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 5160; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.63; Parameter Scan Time = 14:12:53; Parameter PMT Volts = 590; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68919; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.73; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.63; Parameter Scan Time = 14:12:53; Parameter PMT Volts = 740; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68880; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.30; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 01PB2546; Sample source=PB; CBF group=inv(16)


title: AML 25

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/32663.gif

source_name: AML 25; Sample source=BM; CBF group=inv(16)


title: 01PB1111

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/42874.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1440, 8200; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.36; Parameter Scan Time = 23:49:41; Parameter PMT Volts = 600; Parameter Scan Date = 2003-07-08; Parameter Pixel Size = 10; Parameter Laser on time = 101557; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.32; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.36; Parameter Scan Time = 23:49:41; Parameter PMT Volts = 760; Parameter Scan Date = 2003-07-08; Parameter Pixel Size = 10; Parameter Laser on time = 320550; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.92; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 01PB1111; Sample source=PB; CBF group=inv(16)


title: AML 70

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/32811.gif

source_name: AML 70; Sample source=BM; CBF group=inv(16)


title: BAT3ACy5 vs BAT3A DOXCy3

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/49643.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 5360; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.39; Parameter Scan Time = 16:27:18; Parameter PMT Volts = 630; Parameter Scan Date = 2004-02-22; Parameter Pixel Size = 10; Parameter Laser on time = 30021; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.28; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.39; Parameter Scan Time = 16:27:18; Parameter PMT Volts = 710; Parameter Scan Date = 2004-02-22; Parameter Pixel Size = 10; Parameter Laser on time = 62245; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.38; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: BAT3A with Dox

tag: BAT3A with Dox


title: BAT3A-9Cy5 vs BAT3S-3Cy3

description:
Simple annotation: Apoptosis, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/48829.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1560, 4600; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.78; Parameter Scan Time = 18:55:37; Parameter PMT Volts = 530; Parameter Scan Date = 2004-01-29; Parameter Pixel Size = 10; Parameter Laser on time = 28929; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.27; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.78; Parameter Scan Time = 18:55:37; Parameter PMT Volts = 640; Parameter Scan Date = 2004-01-29; Parameter Pixel Size = 10; Parameter Laser on time = 61153; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.44; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: 01KM914

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/42870.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1320, 7240; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.96; Parameter Scan Time = 22:52:36; Parameter PMT Volts = 600; Parameter Scan Date = 2003-07-08; Parameter Pixel Size = 10; Parameter Laser on time = 101500; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.63; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.96; Parameter Scan Time = 22:52:36; Parameter PMT Volts = 700; Parameter Scan Date = 2003-07-08; Parameter Pixel Size = 10; Parameter Laser on time = 320493; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.91; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 01KM914; Sample source=BM; CBF group=inv(16)


title: 02PB184

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-08/43812.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 8040; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.02; Parameter Scan Time = 22:08:07; Parameter PMT Volts = 610; Parameter Scan Date = 2003-07-30; Parameter Pixel Size = 10; Parameter Laser on time = 108009; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.02; Parameter Scan Time = 22:08:07; Parameter PMT Volts = 680; Parameter Scan Date = 2003-07-30; Parameter Pixel Size = 10; Parameter Laser on time = 327002; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.91; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 02PB184; Sample source=PB; CBF group=t(8;21)


title: AML 34

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/32810.gif

source_name: AML 34; Sample source=BM; CBF group=inv(16)


title: 02PB717

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-08/43819.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1160, 7400; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.00; Parameter Scan Time = 23:18:58; Parameter PMT Volts = 640; Parameter Scan Date = 2003-07-30; Parameter Pixel Size = 10; Parameter Laser on time = 108081; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 3.56; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.00; Parameter Scan Time = 23:18:58; Parameter PMT Volts = 680; Parameter Scan Date = 2003-07-30; Parameter Pixel Size = 10; Parameter Laser on time = 327073; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.94; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 02PB717; Sample source=PB; CBF group=t(8;21)


title: 98PB44

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62436.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 5120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.48; Parameter Scan Time = 13:43:10; Parameter PMT Volts = 610; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68890; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.73; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.48; Parameter Scan Time = 13:43:10; Parameter PMT Volts = 690; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68851; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.28; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: aCR (Stratagene)

source_name: 98PB44; Sample source=PB; CBF group=t(8;21)


title: 03PB618

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/61889.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 5480; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.34; Parameter Scan Time = 13:22:34; Parameter PMT Volts = 600; Parameter Scan Date = 2004-10-15; Parameter Pixel Size = 10; Parameter Laser on time = 63724; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.72; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.34; Parameter Scan Time = 13:22:34; Parameter PMT Volts = 750; Parameter Scan Date = 2004-10-15; Parameter Pixel Size = 10; Parameter Laser on time = 63685; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 03PB618; Sample source=PB; CBF group=inv(16)


title: 01KM1838

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/32904.gif

source_name: 01KM1838; Sample source=BM; CBF group=t(8;21)


title: 03KM3633

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-05/61555.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1640, 5560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.82; Parameter Scan Time = 11:40:12; Parameter PMT Volts = 590; Parameter Scan Date = 2004-09-24; Parameter Pixel Size = 10; Parameter Laser on time = 61720; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.75; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.82; Parameter Scan Time = 11:40:12; Parameter PMT Volts = 720; Parameter Scan Date = 2004-09-24; Parameter Pixel Size = 10; Parameter Laser on time = 61679; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.25; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 03KM3633; Sample source=BM; CBF group=inv(16)


title: 99KM1126

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/42539.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1640, 7960; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.26; Parameter Scan Time = 23:49:08; Parameter PMT Volts = 650; Parameter Scan Date = 2003-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 89362; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.26; Parameter Scan Time = 23:49:08; Parameter PMT Volts = 680; Parameter Scan Date = 2003-05-28; Parameter Pixel Size = 10; Parameter Laser on time = 308355; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 3.04; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: CRH

source_name: 99KM1126; Sample source=BM; CBF group=t(8;21)


title: AML 44

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/32903.gif

source_name: AML 44; Sample source=PB; CBF group=t(8;21)


title: HelatTaCy3 vs BAT3S-3

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/48825.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1560, 4640; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.02; Parameter Scan Time = 16:52:51; Parameter PMT Volts = 610; Parameter Scan Date = 2004-02-01; Parameter Pixel Size = 10; Parameter Laser on time = 29005; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.25; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.02; Parameter Scan Time = 16:52:51; Parameter PMT Volts = 640; Parameter Scan Date = 2004-02-01; Parameter Pixel Size = 10; Parameter Laser on time = 61229; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.30; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: HelatTa


title: 01KM2020

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/43264.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 7920; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.32; Parameter Scan Time = 01:49:00; Parameter PMT Volts = 610; Parameter Scan Date = 2003-07-16; Parameter Pixel Size = 10; Parameter Laser on time = 103844; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.20; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.32; Parameter Scan Time = 01:49:00; Parameter PMT Volts = 700; Parameter Scan Date = 2003-07-16; Parameter Pixel Size = 10; Parameter Laser on time = 322837; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.97; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 01KM2020; Sample source=BM; CBF group=t(8;21)


title: HelatTaCy5 vs BAT3A-9Cy3

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/48826.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1560, 4640; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.00; Parameter Scan Time = 17:10:47; Parameter PMT Volts = 590; Parameter Scan Date = 2004-02-01; Parameter Pixel Size = 10; Parameter Laser on time = 29023; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.28; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.00; Parameter Scan Time = 17:10:47; Parameter PMT Volts = 640; Parameter Scan Date = 2004-02-01; Parameter Pixel Size = 10; Parameter Laser on time = 61246; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.36; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: AML 4

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/32812.gif

source_name: AML 4; Sample source=BM; CBF group=t(8;21)


title: BAT3SCy3 vs BAT3SDoxCy5b

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-03/50182.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 4600; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.56; Parameter Scan Time = 16:30:08; Parameter PMT Volts = 600; Parameter Scan Date = 2004-02-27; Parameter Pixel Size = 10; Parameter Laser on time = 30473; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.28; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.56; Parameter Scan Time = 16:30:08; Parameter PMT Volts = 710; Parameter Scan Date = 2004-02-27; Parameter Pixel Size = 10; Parameter Laser on time = 62697; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.45; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: 01KM2712

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-08/43797.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1200, 7960; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.00; Parameter Scan Time = 01:04:22; Parameter PMT Volts = 570; Parameter Scan Date = 2003-07-26; Parameter Pixel Size = 10; Parameter Laser on time = 106474; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 3.22; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 32.00; Parameter Scan Time = 01:04:22; Parameter PMT Volts = 700; Parameter Scan Date = 2003-07-26; Parameter Pixel Size = 10; Parameter Laser on time = 325467; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.97; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 01KM2712; Sample source=BM; CBF group=inv(16)


title: helatTaCy3 vs BAT3A-9

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2004-02/48824.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1560, 4960; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.23; Parameter Scan Time = 16:41:14; Parameter PMT Volts = 560; Parameter Scan Date = 2004-02-01; Parameter Pixel Size = 10; Parameter Laser on time = 28993; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.29; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.23; Parameter Scan Time = 16:41:14; Parameter PMT Volts = 640; Parameter Scan Date = 2004-02-01; Parameter Pixel Size = 10; Parameter Laser on time = 61216; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.33; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: Hela tTa Cy5 vs Bat3 antisense9 Cy3 -2

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-11/47078.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1870, 4620; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.29; Parameter Scan Time = 12:15:23; Parameter PMT Volts = 540; Parameter Scan Date = 2003-11-25; Parameter Pixel Size = 10; Parameter Laser on time = 27323; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.18; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.29; Parameter Scan Time = 12:15:23; Parameter PMT Volts = 610; Parameter Scan Date = 2003-11-25; Parameter Pixel Size = 10; Parameter Laser on time = 59547; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.35; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: Hela Tta

tag: Hela Tta


title: AML 105

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/32902.gif

source_name: AML 105; Sample source=PB; CBF group=t(8;21)


title: AML 53

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-08/32217.gif

source_name: AML 53; Sample source=PB; CBF group=inv(16)


title: 03KM3014

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62455.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1800, 5240; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.24; Parameter Scan Time = 08:20:10; Parameter PMT Volts = 600; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67994; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.72; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.24; Parameter Scan Time = 08:20:10; Parameter PMT Volts = 660; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67955; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.20; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 03KM3014; Sample source=BM; CBF group=inv(16)


title: Hela Tta Cy5 vs Bat3 sense Cy3 -1

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-11/47084.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1570, 4600; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.91; Parameter Scan Time = 12:43:55; Parameter PMT Volts = 530; Parameter Scan Date = 2003-11-25; Parameter Pixel Size = 10; Parameter Laser on time = 27350; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.18; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.91; Parameter Scan Time = 12:43:55; Parameter PMT Volts = 620; Parameter Scan Date = 2003-11-25; Parameter Pixel Size = 10; Parameter Laser on time = 59574; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.40; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: BAT3 sense

tag: BAT3 sense


title: 01KM1951

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/43261.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1320, 8640; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.17; Parameter Scan Time = 01:19:54; Parameter PMT Volts = 650; Parameter Scan Date = 2003-07-16; Parameter Pixel Size = 10; Parameter Laser on time = 103815; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.93; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.17; Parameter Scan Time = 01:19:54; Parameter PMT Volts = 700; Parameter Scan Date = 2003-07-16; Parameter Pixel Size = 10; Parameter Laser on time = 322808; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.95; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 01KM1951; Sample source=BM; CBF group=inv(16)


title: AML 97

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/33009.gif

source_name: AML 97; Sample source=PB; CBF group=inv(16)


title: 02PB2802

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62457.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1840, 5200; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 28.59; Parameter Scan Time = 09:08:32; Parameter PMT Volts = 600; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 68044; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.73; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 28.59; Parameter Scan Time = 09:08:32; Parameter PMT Volts = 660; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 68005; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.25; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: aCR (Stratagene)

source_name: 02PB2802; Sample source=PB; CBF group=t(8;21)


title: 02PB2538

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62454.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1800, 5240; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.75; Parameter Scan Time = 08:06:36; Parameter PMT Volts = 600; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67981; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.72; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.75; Parameter Scan Time = 08:06:36; Parameter PMT Volts = 660; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67942; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.19; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 02PB2538; Sample source=PB; CBF group=inv(16)


title: 03KM2482

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62452.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1920, 5240; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 24.83; Parameter Scan Time = 07:35:36; Parameter PMT Volts = 600; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67950; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.72; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 24.83; Parameter Scan Time = 07:35:36; Parameter PMT Volts = 660; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67911; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.14; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 03KM2482; Sample source=BM; CBF group=inv(16)


title: HelaTta Cy3 vs Bat3 sense Cy5 -2

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45414.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 5000; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.90; Parameter Scan Time = 14:59:33; Parameter PMT Volts = 540; Parameter Scan Date = 2003-10-03; Parameter Pixel Size = 10; Parameter Laser on time = 26320; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.15; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.90; Parameter Scan Time = 14:59:33; Parameter PMT Volts = 720; Parameter Scan Date = 2003-10-03; Parameter Pixel Size = 10; Parameter Laser on time = 58544; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.31; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: Hela tTa

tag: Hela tTa


title: 01PB651

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-07/42880.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1320, 7280; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.32; Parameter Scan Time = 23:24:43; Parameter PMT Volts = 600; Parameter Scan Date = 2003-07-10; Parameter Pixel Size = 10; Parameter Laser on time = 102312; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 4.70; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.32; Parameter Scan Time = 23:24:43; Parameter PMT Volts = 750; Parameter Scan Date = 2003-07-10; Parameter Pixel Size = 10; Parameter Laser on time = 321305; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.94; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: CRH

source_name: 01PB651; Sample source=PB; CBF group=t(8;21)


title: AML 79

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-08/32075.gif

source_name: AML 79; Sample source=PB; CBF group=inv(16)


title: 02PB395

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62456.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1680, 5560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.88; Parameter Scan Time = 08:39:20; Parameter PMT Volts = 600; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 68012; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.72; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.88; Parameter Scan Time = 08:39:20; Parameter PMT Volts = 670; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67973; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.22; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 02PB395; Sample source=PB; CBF group=t(8;21)


title: AML 89

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/33507.gif

source_name: AML 89; Sample source=BM; CBF group=inv(16)


title: 02KM2620

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2003-08/43866.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 960, 8000; Parameter Datafile type = GenePix Results 1.4; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.00; Parameter Scan Time = 03:07:02; Parameter PMT Volts = 600; Parameter Scan Date = 2003-08-06; Parameter Pixel Size = 10; Parameter Laser on time = 109052; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 3.62; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.2; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 31.00; Parameter Scan Time = 03:07:02; Parameter PMT Volts = 720; Parameter Scan Date = 2003-08-06; Parameter Pixel Size = 10; Parameter Laser on time = 328045; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [81971]; Parameter Laser Power = 2.94; Parameter Scanning software version = 2.0.2.2; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 02KM2620; Sample source=BM; CBF group=inv(16)


title: 03PB2423

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62327.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1760, 5040; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.75; Parameter Scan Time = 12:03:21; Parameter PMT Volts = 610; Parameter Scan Date = 2004-10-26; Parameter Pixel Size = 10; Parameter Laser on time = 65261; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.75; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.75; Parameter Scan Time = 12:03:21; Parameter PMT Volts = 700; Parameter Scan Date = 2004-10-26; Parameter Pixel Size = 10; Parameter Laser on time = 65222; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.19; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 03PB2423; Sample source=PB; CBF group=inv(16)


title: 03PB2340

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-06/62198.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1640, 5240; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.79; Parameter Scan Time = 12:01:42; Parameter PMT Volts = 570; Parameter Scan Date = 2004-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 60770; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.79; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.6; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.79; Parameter Scan Time = 12:01:42; Parameter PMT Volts = 800; Parameter Scan Date = 2004-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 60728; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.23; Parameter Scanning software version = 2.0.2.6; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 03PB2340; Sample source=PB; CBF group=inv(16)


title: Hela tTA Cy5  vs Bat3 sense Cy3 -2

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/45415.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 5080; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.20; Parameter Scan Time = 14:49:06; Parameter PMT Volts = 550; Parameter Scan Date = 2003-10-03; Parameter Pixel Size = 10; Parameter Laser on time = 26310; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.11; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.20; Parameter Scan Time = 14:49:06; Parameter PMT Volts = 700; Parameter Scan Date = 2003-10-03; Parameter Pixel Size = 10; Parameter Laser on time = 58534; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.34; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: hela tta

tag: hela tta


title: AML 62

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-08/32140.gif

source_name: AML 62; Sample source=BM; CBF group=t(8;21)


title: 99PB1364

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62453.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1800, 5240; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.05; Parameter Scan Time = 07:51:04; Parameter PMT Volts = 590; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67965; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.72; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.05; Parameter Scan Time = 07:51:04; Parameter PMT Volts = 640; Parameter Scan Date = 2004-11-26; Parameter Pixel Size = 10; Parameter Laser on time = 67926; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.17; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 99PB1364; Sample source=PB; CBF group=inv(16)


title: Hela Tta vs BAT3 sense

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/46206.gif

source_name: BAT3 sense

source_name: Hela Tta


title: 97PB853

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62441.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1760, 5080; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.26; Parameter Scan Time = 13:28:42; Parameter PMT Volts = 580; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68874; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.73; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.26; Parameter Scan Time = 13:28:42; Parameter PMT Volts = 730; Parameter Scan Date = 2004-12-03; Parameter Pixel Size = 10; Parameter Laser on time = 68835; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.27; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: aCR (Stratagene)

source_name: 97PB853; Sample source=PB; CBF group=inv(16)


title: AML 23

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/33367.gif

source_name: AML 23; Sample source=BM; CBF group=t(8;21)


title: AML 90

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/33504.gif

source_name: AML 90; Sample source=BM; CBF group=inv(16)


title: bat3s-3 vs hela tta

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/45331.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1720, 4540; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.48; Parameter Scan Time = 12:56:47; Parameter PMT Volts = 530; Parameter Scan Date = 2003-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 26134; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.13; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 26.48; Parameter Scan Time = 12:56:47; Parameter PMT Volts = 640; Parameter Scan Date = 2003-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 58358; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.36; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: helatta

tag: helatta


title: AML 73

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-10/33648.gif

source_name: CRH

source_name: AML 73; Sample source=PB; CBF group=inv(16)


title: 02KM721

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62325.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1840, 5600; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 23.64; Parameter Scan Time = 11:25:46; Parameter PMT Volts = 640; Parameter Scan Date = 2004-10-26; Parameter Pixel Size = 10; Parameter Laser on time = 65221; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.72; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 23.64; Parameter Scan Time = 11:25:46; Parameter PMT Volts = 700; Parameter Scan Date = 2004-10-26; Parameter Pixel Size = 10; Parameter Laser on time = 65182; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.12; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 02KM721; Sample source=BM; CBF group=t(8;21)


title: 01KM129

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62352.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1400, 5520; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.17; Parameter Scan Time = 14:57:40; Parameter PMT Volts = 570; Parameter Scan Date = 2004-11-05; Parameter Pixel Size = 10; Parameter Laser on time = 65938; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.76; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.17; Parameter Scan Time = 14:57:40; Parameter PMT Volts = 730; Parameter Scan Date = 2004-11-05; Parameter Pixel Size = 10; Parameter Laser on time = 65898; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.28; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 01KM129; Sample source=BM; CBF group=inv(16)


title: HelaTtaCy3 vs BAT3Scy5

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-09/45330.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1560, 4960; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.44; Parameter Scan Time = 12:41:18; Parameter PMT Volts = 470; Parameter Scan Date = 2003-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 26118; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.11; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 25.44; Parameter Scan Time = 12:41:18; Parameter PMT Volts = 650; Parameter Scan Date = 2003-09-26; Parameter Pixel Size = 10; Parameter Laser on time = 58342; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.32; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: BAT3 sense-3cy5

tag: BAT3 sense-3cy5


title: Hela Tta vs BAT3 sense clone

description:
Simple annotation: gene overexpression, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-10/46205.gif

source_name: BAT3 sense-3

tag: BAT3 sense-3


title: 98PB1096

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-03/60269.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1560, 5160; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.20; Parameter Scan Time = 10:27:08; Parameter PMT Volts = 620; Parameter Scan Date = 2005-01-12; Parameter Pixel Size = 10; Parameter Laser on time = 71310; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.74; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 29.20; Parameter Scan Time = 10:27:08; Parameter PMT Volts = 670; Parameter Scan Date = 2005-01-12; Parameter Pixel Size = 10; Parameter Laser on time = 71271; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.22; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 98PB1096; Sample source=PB; CBF group=inv(16)


title: AML 114

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-10/33645.gif

source_name: AML 114; Sample source=PB; CBF group=t(8;21)


title: 98KM702

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62369.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 2040, 5560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 23.18; Parameter Scan Time = 09:52:18; Parameter PMT Volts = 620; Parameter Scan Date = 2004-11-09; Parameter Pixel Size = 10; Parameter Laser on time = 66455; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.73; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 23.18; Parameter Scan Time = 09:52:18; Parameter PMT Volts = 680; Parameter Scan Date = 2004-11-09; Parameter Pixel Size = 10; Parameter Laser on time = 66415; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.10; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 98KM702; Sample source=BM; CBF group=t(8;21)


title: AML 16

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/33567.gif

source_name: AML 16; Sample source=BM; CBF group=t(8;21)


title: 01KM309

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62323.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1760, 5000; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 24.56; Parameter Scan Time = 11:21:55; Parameter PMT Volts = 590; Parameter Scan Date = 2004-11-02; Parameter Pixel Size = 10; Parameter Laser on time = 65542; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.20; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 24.56; Parameter Scan Time = 11:21:55; Parameter PMT Volts = 690; Parameter Scan Date = 2004-11-02; Parameter Pixel Size = 10; Parameter Laser on time = 65503; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.14; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: 01KM309; Sample source=BM; CBF group=t(8;21)


title: HelaTtaCy3 vs BATantisense9Cy5

description:
Simple annotation: Expression Library, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-12/47645.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1600, 4640; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.23; Parameter Scan Time = 16:12:52; Parameter PMT Volts = 540; Parameter Scan Date = 2003-12-16; Parameter Pixel Size = 10; Parameter Laser on time = 27762; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Scan Power = 100; Parameter Laser Power = 4.20; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 30.23; Parameter Scan Time = 16:12:52; Parameter PMT Volts = 560; Parameter Scan Date = 2003-12-16; Parameter Pixel Size = 10; Parameter Laser on time = 59986; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Laser Power = 3.42; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang

source_name: HelaTta

tag: HelaTta


title: 00KM2008

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2005-07/62350.gif

scan_protocol: na Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1400, 4400; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Lars,,Bullinger Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.27; Parameter Scan Time = 14:01:31; Parameter PMT Volts = 580; Parameter Scan Date = 2004-11-05; Parameter Pixel Size = 10; Parameter Laser on time = 65881; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.85; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.27; Parameter Scan Time = 14:01:31; Parameter PMT Volts = 730; Parameter Scan Date = 2004-11-05; Parameter Pixel Size = 10; Parameter Laser on time = 65842; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [83305]; Parameter Laser Power = 3.22; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Lars,,Bullinger

source_name: aCR (Stratagene)

source_name: 00KM2008; Sample source=BM; CBF group=t(8;21)


title: HelatTa Cy3 vs BAT antisense14 Cy5 -1

description:
Simple annotation: Expression Library, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-12/47647.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1440, 4640; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.85; Parameter Scan Time = 14:11:16; Parameter PMT Volts = 540; Parameter Scan Date = 2003-12-16; Parameter Pixel Size = 10; Parameter Laser on time = 27667; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Scan Power = 100; Parameter Laser Power = 4.23; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 27.85; Parameter Scan Time = 14:11:16; Parameter PMT Volts = 580; Parameter Scan Date = 2003-12-16; Parameter Pixel Size = 10; Parameter Laser on time = 59891; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Laser Power = 3.38; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: HelatTa Cy5 vs BAT3 Antisense9 Cy3 -1

description:
Simple annotation: Expression Library, Profiling
Image: http://smd.stanford.edu/MicroArray/gifs/2003-12/47644.gif

scan_protocol: not provided Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1440, 4800; Parameter Datafile type = GenePix Results 2; Software: type: feature extraction; Performer: Annie,,Chang Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 28.07; Parameter Scan Time = 17:05:07; Parameter PMT Volts = 500; Parameter Scan Date = 2003-12-12; Parameter Pixel Size = 10; Parameter Laser on time = 27563; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 4.23; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.2.4; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 28.07; Parameter Scan Time = 17:05:07; Parameter PMT Volts = 560; Parameter Scan Date = 2003-12-12; Parameter Pixel Size = 10; Parameter Laser on time = 59787; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000B [82726]; Parameter Laser Power = 3.41; Parameter Scanning software version = 2.0.2.4; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Annie,,Chang


title: AML 98

description:
Simple annotation: Myeloid Leukemias, Acute Myeloid Leukemia
Image: http://smd.stanford.edu/MicroArray/gifs/2002-09/33566.gif

source_name: AML 98; Sample source=PB; CBF group=t(8;21)