title: CB483- DNA; A1552 vs.  AIIIpO139#3

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69481.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 990, 27290; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.10; Parameter Scan Time = 11:22:02; Parameter PMT Volts = 530; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 62825; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.32; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.10; Parameter Scan Time = 11:22:02; Parameter PMT Volts = 720; Parameter Scan Date = 2006-08-01; Parameter Pixel Size = 10; Parameter Laser on time = 208753; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB519- DNA; A1552 vs.  AIpO37#6

status: Public on Apr 25 2007

type: genomic

city: Stanford

first: Melanie

last: Blokesch

state: CA

address: 279 Campus Drive

department: Medical School

country: USA

institute: Stanford University

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70357.gif

hyb_protocol: not provided

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 400, 26930; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.08; Parameter Scan Time = 11:43:08; Parameter PMT Volts = 520; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 64059; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.08; Parameter Scan Time = 11:43:08; Parameter PMT Volts = 700; Parameter Scan Date = 2006-09-21; Parameter Pixel Size = 10; Parameter Laser on time = 209986; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch

data_processing: VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)

molecule: genomic DNA

organism: Vibrio cholerae

label_protocol: not provided

extract_protocol: not provided


title: CB492- DNA; A1552 vs.  AIVpO139#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69545.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 680, 27930; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.98; Parameter Scan Time = 11:48:30; Parameter PMT Volts = 520; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 63103; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.98; Parameter Scan Time = 11:48:30; Parameter PMT Volts = 740; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 209031; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB490- DNA; A1552 vs.  AIVpO139#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69544.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 770, 27700; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.78; Parameter Scan Time = 11:29:10; Parameter PMT Volts = 520; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 63084; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.43; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.78; Parameter Scan Time = 11:29:10; Parameter PMT Volts = 740; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 209012; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB460- DNA; A1552 vs.  AIVpO139#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69542.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 800, 27970; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.92; Parameter Scan Time = 11:43:07; Parameter PMT Volts = 520; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 63098; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.40; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.92; Parameter Scan Time = 11:43:07; Parameter PMT Volts = 740; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 209025; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB494- DNA; A1552 vs.  AIVpO139#8

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69547.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 780, 27860; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.11; Parameter Scan Time = 12:00:27; Parameter PMT Volts = 520; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 63116; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.11; Parameter Scan Time = 12:00:27; Parameter PMT Volts = 740; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 209043; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB493- DNA; A1552 vs.  AIVpO139#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69546.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 780, 28050; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.03; Parameter Scan Time = 11:53:33; Parameter PMT Volts = 520; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 63108; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.03; Parameter Scan Time = 11:53:33; Parameter PMT Volts = 740; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 209035; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB489- DNA; A1552 vs.  AIVpO139#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69543.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 740, 27720; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.71; Parameter Scan Time = 11:24:37; Parameter PMT Volts = 520; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 63079; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.42; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.71; Parameter Scan Time = 11:24:37; Parameter PMT Volts = 740; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 209006; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB450- DNA; A1552 vs.  AIVpO139#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-08/69541.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 960, 27610; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.86; Parameter Scan Time = 11:34:48; Parameter PMT Volts = 520; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 63090; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.44; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.86; Parameter Scan Time = 11:34:48; Parameter PMT Volts = 740; Parameter Scan Date = 2006-08-04; Parameter Pixel Size = 10; Parameter Laser on time = 209017; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB058-A1552 vs. MCIISGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70090.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27640; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.28; Parameter Scan Time = 13:38:32; Parameter PMT Volts = 510; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 63794; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.33; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.28; Parameter Scan Time = 13:38:32; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 209721; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: P3_AS_HepG2_RCyP+_C89_B1

status: Public on May 25 2007

type: RNA

city: Santa Clara

first: Thomas

middle: R

last: Gingeras

address: 3380 Central Expressway

institute: Affymetrix, Inc.

description: See publication for details

hyb_protocol: See publication for details

scan_protocol: See publication for details

data_processing: See publication for details

label: biotin

molecule: polyA RNA

organism: Homo sapiens

source_name: Total Cytoplasmic RNA from HepG2 cell line

label_protocol: See publication for details

extract_protocol: Long RNA protocol - see publication for details

tag: See publication for details


title: CA1095-A1552 vs. MCISGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70088.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 480, 27820; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.99; Parameter Scan Time = 13:03:33; Parameter PMT Volts = 490; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 63758; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.27; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.99; Parameter Scan Time = 13:03:33; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 209685; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.36; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB270- DNA; A1552 vs. AIVpO37#8A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70504.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27100; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.96; Parameter Scan Time = 10:22:06; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 64397; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.31; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.96; Parameter Scan Time = 10:22:06; Parameter PMT Volts = 720; Parameter Scan Date = 2006-09-27; Parameter Pixel Size = 10; Parameter Laser on time = 210324; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1093-A1552 vs. MCISGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70087.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 660, 28370; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.87; Parameter Scan Time = 12:51:06; Parameter PMT Volts = 510; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 63746; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.26; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.87; Parameter Scan Time = 12:51:06; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 209673; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.36; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB059-A1552 vs. MCIIISGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70091.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1210, 27970; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.34; Parameter Scan Time = 13:45:48; Parameter PMT Volts = 510; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 63800; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.28; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.34; Parameter Scan Time = 13:45:48; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 209727; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB060-A1552 vs. MCIIISGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70092.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1210, 27970; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.41; Parameter Scan Time = 13:53:05; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 63808; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.42; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.41; Parameter Scan Time = 13:53:05; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 209735; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB057-A1552 vs. MCIISGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70089.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1280, 27640; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.19; Parameter Scan Time = 13:28:04; Parameter PMT Volts = 510; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 63782; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.34; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.19; Parameter Scan Time = 13:28:04; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 209710; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1075-A1552 vs. MCIISGC#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70085.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 770, 27440; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.61; Parameter Scan Time = 12:32:09; Parameter PMT Volts = 490; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 63727; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.20; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.61; Parameter Scan Time = 12:32:09; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 209654; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.36; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB501-A1552 vs. MCIIISGC#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70242.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 640, 27320; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.59; Parameter Scan Time = 10:26:14; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-15; Parameter Pixel Size = 10; Parameter Laser on time = 63912; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.53; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.59; Parameter Scan Time = 10:26:14; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-15; Parameter Pixel Size = 10; Parameter Laser on time = 209839; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB093-A1552 vs. A1552SGC-A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65701.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 960, 27800; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.53; Parameter Scan Time = 09:48:28; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 59052; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.53; Parameter Scan Time = 09:48:28; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 204977; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB098-A1552 vs. A1552SGC-C

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65706.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 840, 27700; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.93; Parameter Scan Time = 10:14:34; Parameter PMT Volts = 530; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 59080; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.47; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.93; Parameter Scan Time = 10:14:34; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 205005; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB095-A1552 vs. A1552SGC-B

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65703.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 960, 27800; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.67; Parameter Scan Time = 09:58:47; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 59066; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.48; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.67; Parameter Scan Time = 09:58:47; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 204990; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB096-A1552 vs. A1552SGC-B

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65704.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 980, 28010; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.81; Parameter Scan Time = 10:05:07; Parameter PMT Volts = 520; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 59071; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.54; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.81; Parameter Scan Time = 10:05:07; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 204996; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB502-A1552 vs. MCIIISGC#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70243.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 740, 27800; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.70; Parameter Scan Time = 10:34:24; Parameter PMT Volts = 500; Parameter Scan Date = 2006-09-15; Parameter Pixel Size = 10; Parameter Laser on time = 63921; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.56; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.70; Parameter Scan Time = 10:34:24; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-15; Parameter Pixel Size = 10; Parameter Laser on time = 209848; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.41; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB458- DNA; A1552 vs.  ApO139#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68809.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 930, 27450; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.09; Parameter Scan Time = 12:13:58; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 62020; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.09; Parameter Scan Time = 12:13:58; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207947; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB455- DNA; A1552 vs. MO10

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68806.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 600, 27740; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.93; Parameter Scan Time = 11:59:04; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 62006; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.93; Parameter Scan Time = 11:59:04; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207933; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB094-A1552 vs. A1552SGC-A

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65702.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 960, 27800; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.63; Parameter Scan Time = 09:54:11; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 59060; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.52; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.63; Parameter Scan Time = 09:54:11; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 204985; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB097-A1552 vs. A1552SGC-C

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65705.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 980, 28010; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.92; Parameter Scan Time = 10:10:13; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 59077; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.49; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 37.92; Parameter Scan Time = 10:10:13; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-02; Parameter Pixel Size = 10; Parameter Laser on time = 205002; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB457- DNA; A1552 vs.  ApO139#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68808.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 750, 27600; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.03; Parameter Scan Time = 12:08:28; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 62015; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.03; Parameter Scan Time = 12:08:28; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207942; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB462- DNA; A1552 vs.  ApO139#8

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68812.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 860, 27510; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.25; Parameter Scan Time = 12:27:02; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 62034; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.52; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.25; Parameter Scan Time = 12:27:02; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207961; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB456- DNA; A1552 vs.  ApO139#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68807.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 980, 27370; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.96; Parameter Scan Time = 12:03:49; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 62010; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.96; Parameter Scan Time = 12:03:49; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207937; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1115 - DNA; A1552 vs. ASGC#3

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66039.gif
Strain Name: ASGC#3  - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.88; Parameter Scan Time = 12:18:12; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59261; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.66; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.88; Parameter Scan Time = 12:18:12; Parameter PMT Volts = 680; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205186; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB476- DNA; A1552 vs.  AIIpO139#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69127.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 960, 27290; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.51; Parameter Scan Time = 12:40:14; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62110; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.51; Parameter Scan Time = 12:40:14; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208037; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB454- DNA; A1552 vs. MO10

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68805.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1170, 27240; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.84; Parameter Scan Time = 11:48:44; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 61996; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.84; Parameter Scan Time = 11:48:44; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207923; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB472- DNA; A1552 vs.  AIIpO139#3

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69123.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1170, 27560; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.87; Parameter Scan Time = 13:04:26; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62134; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.41; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.87; Parameter Scan Time = 13:04:26; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208061; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.36; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1076-A1552 vs. MCIISGC#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-09/70086.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 790, 27260; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.64; Parameter Scan Time = 12:38:03; Parameter PMT Volts = 510; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 63733; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.27; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.64; Parameter Scan Time = 12:38:03; Parameter PMT Volts = 740; Parameter Scan Date = 2006-09-09; Parameter Pixel Size = 10; Parameter Laser on time = 209660; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.36; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB459- DNA; A1552 vs.  ApO139#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68810.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 800, 27690; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.13; Parameter Scan Time = 12:18:28; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 62025; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.51; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.13; Parameter Scan Time = 12:18:28; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207952; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB480- DNA; A1552 vs.  MO10

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69131.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1010, 27190; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.41; Parameter Scan Time = 12:34:12; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62104; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.38; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.41; Parameter Scan Time = 12:34:12; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208031; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB479- DNA; A1552 vs.  MO10

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69130.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1010, 27190; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.33; Parameter Scan Time = 12:28:16; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62097; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.37; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.33; Parameter Scan Time = 12:28:16; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208024; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.32; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1068 - DNA; A1552 vs. VCO139-Kan

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66073.gif
Strain Name: VCO139-Kan (donor DNA strain) - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27770; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.06; Parameter Scan Time = 13:38:24; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 59597; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.62; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.06; Parameter Scan Time = 13:38:24; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 205522; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.40; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB471- DNA; A1552 vs.  AIIpO139#3

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69122.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1170, 27490; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.80; Parameter Scan Time = 12:59:55; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62130; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.40; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.80; Parameter Scan Time = 12:59:55; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208057; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.36; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB478- DNA; A1552 vs.  AIIpO139#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69129.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1010, 27470; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.27; Parameter Scan Time = 12:23:21; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62093; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.36; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.27; Parameter Scan Time = 12:23:21; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208020; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.33; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB475- DNA; A1552 vs.  AIIpO139#5

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69126.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 860, 27510; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.71; Parameter Scan Time = 12:55:14; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62125; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.40; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.71; Parameter Scan Time = 12:55:14; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208052; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB451- DNA; A1552 vs. ApO139#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68803.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1170, 27240; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.84; Parameter Scan Time = 11:53:33; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 62000; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.50; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.84; Parameter Scan Time = 11:53:33; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207927; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.36; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB477- DNA; A1552 vs.  AIIpO139#6

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69128.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1010, 27200; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.19; Parameter Scan Time = 12:17:56; Parameter PMT Volts = 520; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62087; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.35; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.19; Parameter Scan Time = 12:17:56; Parameter PMT Volts = 730; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208014; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.32; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB474- DNA; A1552 vs.  AIIpO139#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69125.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 930, 27110; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.65; Parameter Scan Time = 12:50:12; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62120; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.40; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.65; Parameter Scan Time = 12:50:12; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208047; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.35; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1112 - DNA; A1552 vs. ASGC#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66036.gif
Strain Name: ASGC#2

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.72; Parameter Scan Time = 11:59:17; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59242; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.60; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.72; Parameter Scan Time = 11:59:17; Parameter PMT Volts = 690; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205167; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1111 - DNA; A1552 vs. ASGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66035.gif
Strain Name: ASGC#1 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.55; Parameter Scan Time = 11:41:00; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59224; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.58; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.55; Parameter Scan Time = 11:41:00; Parameter PMT Volts = 690; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205149; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1110 - DNA; A1552 vs. ASGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66034.gif
Strain Name: ASGC#1

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 720, 27330; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.46; Parameter Scan Time = 11:28:42; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59212; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.57; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.46; Parameter Scan Time = 11:28:42; Parameter PMT Volts = 690; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205137; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1113 - DNA; A1552 vs. ASGC#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66037.gif
Strain Name: ASGC#2 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.80; Parameter Scan Time = 12:06:07; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59249; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.61; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.80; Parameter Scan Time = 12:06:07; Parameter PMT Volts = 690; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205174; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1114 - DNA; A1552 vs. ASGC#3

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66038.gif
Strain Name: ASGC#3

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 560, 27120; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.78; Parameter Scan Time = 12:11:38; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59254; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.64; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.78; Parameter Scan Time = 12:11:38; Parameter PMT Volts = 690; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205179; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1128 - DNA; A1552 vs. AIISGC#3

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66052.gif
Strain Name: AIISGC#3

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 340, 27550; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.45; Parameter Scan Time = 15:29:40; Parameter PMT Volts = 530; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59365; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.59; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.45; Parameter Scan Time = 15:29:40; Parameter PMT Volts = 730; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205290; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB473- DNA; A1552 vs.  AIIpO139#4

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-07/69124.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 1050, 27450; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.59; Parameter Scan Time = 12:45:21; Parameter PMT Volts = 510; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 62115; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.39; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 42.59; Parameter Scan Time = 12:45:21; Parameter PMT Volts = 740; Parameter Scan Date = 2006-06-15; Parameter Pixel Size = 10; Parameter Laser on time = 208042; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1124 - DNA; A1552 vs. AIISGC#1

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66048.gif
Strain Name: AIISGC#1

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 520, 27020; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.00; Parameter Scan Time = 15:01:09; Parameter PMT Volts = 510; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59336; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.51; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.00; Parameter Scan Time = 15:01:09; Parameter PMT Volts = 740; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205261; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1127 - DNA; A1552 vs. AIISGC#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66051.gif
Strain Name: AIISGC#2 - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 220, 27340; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.31; Parameter Scan Time = 15:22:11; Parameter PMT Volts = 520; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59357; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.56; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.31; Parameter Scan Time = 15:22:11; Parameter PMT Volts = 740; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205282; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1126 - DNA; A1552 vs. AIISGC#2

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66050.gif
Strain Name: AIISGC#2

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 150, 27550; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.20; Parameter Scan Time = 15:13:59; Parameter PMT Volts = 520; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 59349; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.54; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.20; Parameter Scan Time = 15:13:59; Parameter PMT Volts = 740; Parameter Scan Date = 2005-12-09; Parameter Pixel Size = 10; Parameter Laser on time = 205274; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.36; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1067 - DNA; A1552 vs. VCO139-Kan

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66072.gif
Strain Name: VCO139-Kan (donor DNA strain)

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 900, 27500; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.00; Parameter Scan Time = 13:25:34; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 59584; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.60; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 41.00; Parameter Scan Time = 13:25:34; Parameter PMT Volts = 720; Parameter Scan Date = 2005-12-10; Parameter Pixel Size = 10; Parameter Laser on time = 205509; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.38; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CB461- DNA; A1552 vs.  ApO139#8

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2006-06/68811.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 860, 27510; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.17; Parameter Scan Time = 12:22:48; Parameter PMT Volts = 470; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 62029; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.51; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 43.17; Parameter Scan Time = 12:22:48; Parameter PMT Volts = 690; Parameter Scan Date = 2006-06-10; Parameter Pixel Size = 10; Parameter Laser on time = 207956; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.34; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch


title: CA1109 - DNA; A1552 vs. VCO139-Kan

description:
Simple annotation: Genome comparison, DNA
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/66033.gif
Strain Name: VCO139-Kan (donor DNA strain) - replicate

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Image Origin = 720, 27330; Parameter Datafile type = GenePix Results 3; Software: type: feature extraction; Performer: Melanie,,Blokesch Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.30; Parameter Scan Time = 11:15:50; Parameter PMT Volts = 540; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 59200; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 2.59; Parameter Scan Power = 100; Parameter Scanning software version = 2.0.3.1; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scan Temperature = 40.30; Parameter Scan Time = 11:15:50; Parameter PMT Volts = 690; Parameter Scan Date = 2005-12-07; Parameter Pixel Size = 10; Parameter Laser on time = 205124; Parameter Focus Position = 0; Parameter Scanner Model = GenePix 4000A [48444]; Parameter Laser Power = 1.37; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter Scanning software = AxImageIO; Performer: Melanie,,Blokesch