title: Halobacterium NRC-1 light diurnal experiment 2, 2340 minutes post entrainment, Array 3908

description: Halobacterium NRC-1 light diurnal experiment 2, 2340minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-46

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2340 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _234 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2340 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 2160 minutes post entrainment, Array 3905

status: Public on Jan 03 2008

type: RNA

city: Seattle

first: Marc

last: Facciotti

state: WA

address: 1441 North 34th Street

country: USA

institute: Institute for Systems Biology

description: Halobacterium NRC-1 light diurnal experiment 2, 2160minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-43

scan_protocol: ScanArray 5000, using Packard BioChip ScanArray software. See http://www.systemsbiology.org/Scientists_and_Research/Technology/ISB_Facilities/Microarray for microarray scanning details

data_processing: AnalyzerDG software for spotfinding.  see http://www.systemsbiology.org/Scientists_and_Research/Technology/Data_Management/Microarray_Pipeline for more details

label: Alexa 594

molecule: total RNA

organism: Halobacterium salinarum NRC-1

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2160 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _216 minutes post entrainment.

extract_protocol: Total DNA-free RNA prepared using the Absolutely RNA miniprep kit (Stratagene) and analyzed by PCR to rule out DNA contamination, with Agilent Bioanalyzer to verify integrity, and in the spectrophotometer for quantification.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2160 minutes post entrainment.

label: Alexa 660

source_name: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3960 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled in light 3960 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 3060 minutes post entrainment, Array 4684

description: Halobacterium NRC-1 light diurnal experiment 2, 3060minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-53

source_name: Halobacterium NRC-1 light diurnal experiment 2, 3060 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _306 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3060 minutes post entrainment.

tag: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3960 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 2880 minutes post entrainment, Array 4682

description: Halobacterium NRC-1 light diurnal experiment 2, 2880minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-51

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2880 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _288 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2880 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 1620 minutes post entrainment, Array 3900

description: Halobacterium NRC-1 light diurnal experiment 2, 1620minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-38

source_name: Halobacterium NRC-1 light diurnal experiment 2, 1620 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _162 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 1620 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 1980 minutes post entrainment, Array 3903

description: Halobacterium NRC-1 light diurnal experiment 2, 1980minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-41

source_name: Halobacterium NRC-1 light diurnal experiment 2, 1980 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _198 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 1980 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 1800 minutes post entrainment, Array 3901

description: Halobacterium NRC-1 light diurnal experiment 2, 1800minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-39

source_name: Halobacterium NRC-1 light diurnal experiment 2, 1800 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _180 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 1800 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2700 minutes post entrainment, Array 9154

description: Halobacterium NRC-1 dark diurnal experiment 3, 2700minutes post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-35

label: Alexa 547

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2700 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-79

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 2700 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2700 minutes post entrainment.

label: Alexa 647

source_name: Standard mid-log Halobacterium NRC-1 reference sample.

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.

tag: Halobacterium NRC-1 standard reference grown in standard growth media to mid-log phase (OD600 0.5-0.6).


title: Halobacterium NRC-1 dark diurnal experiment 3, 2520 minutes post entrainment, Array 9153

description: Halobacterium NRC-1 dark diurnal experiment 3, 2520minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2520 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-78

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 2520 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2520 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-35


title: Halobacterium NRC-1 dark diurnal experiment 3, 2700 minutes post entrainment, Array 9155

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-80


title: Halobacterium NRC-1 light diurnal experiment 2, 1800 minutes post entrainment, Array 3902

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-40


title: Halobacterium NRC-1 light diurnal experiment 2, 1980 minutes post entrainment, Array 3904

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-42


title: Halobacterium NRC-1 dark diurnal experiment 3, 2880 minutes post entrainment, Array 9156

description: Halobacterium NRC-1 dark diurnal experiment 3, 2880minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2880 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-81

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 2880 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2880 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 1440 minutes post entrainment, Array 3898

description: Halobacterium NRC-1 light diurnal experiment 2, 1440minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-36

source_name: Halobacterium NRC-1 light diurnal experiment 2, 1440 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _144 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 1440 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 2700 minutes post entrainment, Array 4757

description: Halobacterium NRC-1 light diurnal experiment 2, 2700minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-49

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2700 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _270 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2700 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 1620 minutes post entrainment, Array 4755

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-37


title: Halobacterium NRC-1 light diurnal experiment 2, 2520 minutes post entrainment, Array 4756

description: Halobacterium NRC-1 light diurnal experiment 2, 2520minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-47

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2520 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _252 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2520 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2520 minutes post entrainment, Array 9152

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-77


title: Halobacterium NRC-1 light diurnal experiment 2, 2340 minutes post entrainment, Array 3907

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-45


title: Halobacterium NRC-1 dark diurnal experiment 3, 2880 minutes post entrainment, Array 9157

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-82


title: Halobacterium NRC-1 light diurnal experiment 2, 1440 minutes post entrainment, Array 4754

tag: Halobacterium NRC-1 light diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 1440 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 3240 minutes post entrainment, Array 4686

description: Halobacterium NRC-1 light diurnal experiment 2, 3240minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-55

source_name: Halobacterium NRC-1 light diurnal experiment 2, 3240 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _324 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3240 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2340 minutes post entrainment, Array 9149

description: Halobacterium NRC-1 dark diurnal experiment 3, 2340minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2340 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-76

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 2340 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2340 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1980 minutes post entrainment, Array 9143

description: Halobacterium NRC-1 dark diurnal experiment 3, 1980minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 1980 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-70

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 1980 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1980 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1980 minutes post entrainment, Array 9142

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-69


title: Halobacterium NRC-1 dark diurnal experiment 3, 2160 minutes post entrainment, Array 9144

description: Halobacterium NRC-1 dark diurnal experiment 3, 2160minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2160 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-71

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 2160 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2160 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2340 minutes post entrainment, Array 9148

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-75


title: Halobacterium NRC-1 dark diurnal experiment 3, 2220 minutes post entrainment, Array 9146

description: Halobacterium NRC-1 dark diurnal experiment 3, 2220minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2220 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-73

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 2220 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2220 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2160 minutes post entrainment, Array 9145

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-72


title: Halobacterium NRC-1 dark diurnal experiment 3, 1800 minutes post entrainment, Array 9141

description: Halobacterium NRC-1 dark diurnal experiment 3, 1800minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 1800 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-68

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 1800 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1800 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2220 minutes post entrainment, Array 9147

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-74


title: Halobacterium NRC-1 dark diurnal experiment 3, 1620 minutes post entrainment, Array 9139

description: Halobacterium NRC-1 dark diurnal experiment 3, 1620minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 1620 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-66

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 1620 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1620 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1620 minutes post entrainment, Array 9138

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-65


title: Halobacterium NRC-1 dark diurnal experiment 3, 2520 minutes post entrainment, Array 9177

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 2520 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-54

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 2520 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1380 minutes post entrainment, Array 9133

description: Halobacterium NRC-1 dark diurnal experiment 3, 1380minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 1380 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-60

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 1380 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1380 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-35


title: Halobacterium NRC-1 dark diurnal experiment 3, 1440 minutes post entrainment, Array 9135

description: Halobacterium NRC-1 dark diurnal experiment 3, 1440minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 1440 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-62

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 1440 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1440 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1500 minutes post entrainment, Array 9136

description: Halobacterium NRC-1 dark diurnal experiment 3, 1500minutes post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 1500 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-63

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 37degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 159µE/M^2/sec. and sampled 1500 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1500 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1440 minutes post entrainment, Array 9134

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-61

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.

tag: Halobacterium NRC-1 standard reference grown in standard growth media to mid-log phase (OD600 0.5-0.6).


title: Halobacterium NRC-1 dark diurnal experiment 3, 1500 minutes post entrainment, Array 9137

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-64


title: Halobacterium NRC-1 dark diurnal experiment 3, 1800 minutes post entrainment, Array 9140

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-67


title: Halobacterium NRC-1 dark diurnal experiment 3, 2880 minutes post entrainment, Array 9213

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 2880 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-58

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 2880 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2220 minutes post entrainment, Array 9173

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 2220 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-50

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 2220 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2700 minutes post entrainment, Array 9179

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 2700 minutes post mock entrainment

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2700 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-56

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 2700 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2700 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1380 minutes post entrainment, Array 9132

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-59

source_name: Standard mid-log Halobacterium NRC-1 reference sample.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2340 minutes post entrainment, Array 9175

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 2340 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-52

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 2340 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2160 minutes post entrainment, Array 9171

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 2160 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-48

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 2160 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2520 minutes post entrainment, Array 9176

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2520 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-53

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2520 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2880 minutes post entrainment, Array 9212

source_name: Halobacterium NRC-1 dark diurnal experiment 3, 2880 minutes post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-57

tag: Halobacterium NRC-1 dark diurnal experiment 3 with cells grown at 37degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2880 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1980 minutes post entrainment, Array 9169

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 1980 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-46

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 1980 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 2220 minutes post entrainment, Array 9172

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-49


title: Halobacterium NRC-1 dark diurnal experiment 3, 2160 minutes post entrainment, Array 9170

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-47


title: Halobacterium NRC-1 dark diurnal experiment 3, 2340 minutes post entrainment, Array 9174

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-51

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-35


title: Halobacterium NRC-1 dark diurnal experiment 3, 2700 minutes post entrainment, Array 9178

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-55


title: Halobacterium NRC-1 dark diurnal experiment 3, 1800 minutes post entrainment, Array 9167

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 1800 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-44

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 1800 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1620 minutes post entrainment, Array 9165

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 1620 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-42

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 1620 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1500 minutes post entrainment, Array 9163

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 1500 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-40

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 1500 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1380 minutes post entrainment, Array 9159

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 1380 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-36

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 1380 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1620 minutes post entrainment, Array 9164

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-41


title: Halobacterium NRC-1 dark diurnal experiment 3, 1980 minutes post entrainment, Array 9168

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-45


title: Halobacterium NRC-1 dark diurnal experiment 3, 1800 minutes post entrainment, Array 9166

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-43


title: Halobacterium NRC-1 dark diurnal experiment 3, 1440 minutes post entrainment, Array 9161

description: Halobacterium NRC-1 dark diurnal experiment 3, control sample 1440 minutes post mock entrainment

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-38

growth_protocol: Halobacterium NRC-1 grown in aerobic conditions at 37degrees C  in the dark for 72 hours as a control then sampled 1440 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 3900 minutes post entrainment, Array 7643

description: Halobacterium NRC-1 dark diurnal experiment 2, control sample 00_mminutes post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-70

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 3900 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 3900 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 3900 minutes post entrainment.

label: Alexa 532


title: Halobacterium NRC-1 dark diurnal experiment 2, 3180 minutes post entrainment, Array 7468

description: Halobacterium NRC-1 dark diurnal experiment 2, control sample 80_mminutes post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-63

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 3180 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 3180 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 3180 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 3660 minutes post entrainment, Array 7469

description: Halobacterium NRC-1 dark diurnal experiment 2, control sample 60_mminutes post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-67

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 3660 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 3660 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 3660 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 3, 1500 minutes post entrainment, Array 9162

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-39


title: Halobacterium NRC-1 dark diurnal experiment 2, 3180 minutes post entrainment, Array 7640

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-64


title: Halobacterium NRC-1 dark diurnal experiment 2, 2940 minutes post entrainment, Array 7547

description: Halobacterium NRC-1 dark diurnal experiment 2, control sample 40_mminutes post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-62

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 2940 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 2940 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2940 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 3420 minutes post entrainment, Array 7466

description: Halobacterium NRC-1 dark diurnal experiment 2, control sample 20_mminutes post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-65

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 3420 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 3420 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 3420 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 2940 minutes post entrainment, Array 7467

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-61

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.


title: Halobacterium NRC-1 dark diurnal experiment 2, 3660 minutes post entrainment, Array 7642

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-68


title: Halobacterium NRC-1 dark diurnal experiment 3, 1440 minutes post entrainment, Array 9160

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-35

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-37


title: Halobacterium NRC-1 dark diurnal experiment 3, 1380 minutes post entrainment, Array 9158


title: Halobacterium NRC-1 dark diurnal experiment 2, 3900 minutes post entrainment, Array 7470

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-69


title: Halobacterium NRC-1 dark diurnal experiment 2, 2700 minutes post entrainment, Array 7463

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-59

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 2700 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 2700 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2700 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 3420 minutes post entrainment, Array 7641

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-66


title: Halobacterium NRC-1 dark diurnal experiment 2, 2460 minutes post entrainment, Array 7462

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-57

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 2460 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 2460 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2460 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 2220 minutes post entrainment, Array 7461

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 2220 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 2220 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 2220 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 2220 minutes post entrainment, Array 7544

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-56


title: Halobacterium NRC-1 dark diurnal experiment 2, 1980 minutes post entrainment, Array 7543

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-54

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 1980 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 1980 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1980 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 2460 minutes post entrainment, Array 7545

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-58


title: Halobacterium NRC-1 dark diurnal experiment 2, 1260 minutes post entrainment, Array 7455

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-47

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 1260 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 1260 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1260 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 1500 minutes post entrainment, Array 7541

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-50

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 1500 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 1500 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1500 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 0780 minutes post entrainment, Array 7453

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-43

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 0780 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 0780 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 0780 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 1260 minutes post entrainment, Array 7540

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-48


title: Halobacterium NRC-1 dark diurnal experiment 2, 1980 minutes post entrainment, Array 7460

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-53


title: Halobacterium NRC-1 dark diurnal experiment 2, 1740 minutes post entrainment, Array 7457

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-51

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 1740 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 1740 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1740 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 1020 minutes post entrainment, Array 7454

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-45

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 1020 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 1020 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 1020 minutes post entrainment.

tag: Halobacterium NRC-1 standard reference grown in standard growth media to mid-log phase (OD600 0.5-0.6).


title: Halobacterium NRC-1 dark diurnal experiment 2, 0060 minutes post entrainment, Array 7450

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-37

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 0060 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 0060 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 0060 minutes post entrainment.

source_name: Standard mid-log Halobacterium NRC-1 reference sample.


title: Halobacterium NRC-1 dark diurnal experiment 2, 1740 minutes post entrainment, Array 7542

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-52


title: Halobacterium NRC-1 dark diurnal experiment 2, 0300 minutes post entrainment, Array 7451

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-39

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 0300 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 0300 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 0300 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 0060 minutes post entrainment, Array 7535

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-38


title: Halobacterium NRC-1 dark diurnal experiment 2, 1020 minutes post entrainment, Array 7539

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-46


title: Halobacterium NRC-1 dark diurnal experiment 2, 0300 minutes post entrainment, Array 7536

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-40


title: Halobacterium NRC-1 dark diurnal experiment 2, 0540 minutes post entrainment, Array 7537

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-42

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 0540 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 0540 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 0540 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 0780 minutes post entrainment, Array 7538

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-44


title: Halobacterium NRC-1 dark diurnal experiment 2, 1500 minutes post entrainment, Array 7456

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-49


title: Halobacterium NRC-1 dark diurnal experiment 2, 0000 minutes post entrainment, Array 7534

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-36

source_name: Halobacterium NRC-1 dark diurnal experiment 2, 0000 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the dark 0000 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled 0000 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 0000 minutes post entrainment, Array 7449

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-35


title: Halobacterium NRC-1 dark diurnal experiment 2, 2700 minutes post entrainment, Array 7546

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-60


title: Halobacterium NRC-1 dark diurnal experiment 1, 68.5 hours post entrainment, Array 7374

description: Halobacterium NRC-1 dark diurnal experiment 1, 68.5 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-69

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 68.5 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness68.5 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 1 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled in darkness.5_h hours post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 64.5 hours post entrainment, Array 7350

description: Halobacterium NRC-1 dark diurnal experiment 1, 64.5 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-67

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 64.5 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness64.5 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 56.0 hours post entrainment, Array 7432

description: Halobacterium NRC-1 dark diurnal experiment 1, 56.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-64

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 56.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness56.0 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 1 with cells grown at 42degrees C in aerobic conditions and entrained for 72 hours with 12:12hr light:dark cycle and sampled in darkness.0_h hours post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 2, 0540 minutes post entrainment, Array 7452

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-41

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.


title: Halobacterium NRC-1 dark diurnal experiment 1, 60.0 hours post entrainment, Array 7433

description: Halobacterium NRC-1 dark diurnal experiment 1, 60.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-66

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 60.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness60.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 64.5 hours post entrainment, Array 7434

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-68


title: Halobacterium NRC-1 dark diurnal experiment 1, 36.0 hours post entrainment, Array 7305

description: Halobacterium NRC-1 dark diurnal experiment 1, 36.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-53

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 36.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness36.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 40.0 hours post entrainment, Array 7306

description: Halobacterium NRC-1 dark diurnal experiment 1, 40.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-55

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 40.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness40.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 44.0 hours post entrainment, Array 7307

description: Halobacterium NRC-1 dark diurnal experiment 1, 44.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-57

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 44.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness44.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 48.0 hours post entrainment, Array 7430

description: Halobacterium NRC-1 dark diurnal experiment 1, 48.0 hours post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 48.0 hours post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-60

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness48.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 60.0 hours post entrainment, Array 7349

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-65


title: Halobacterium NRC-1 dark diurnal experiment 1, 44.0 hours post entrainment, Array 7345

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-58


title: Halobacterium NRC-1 dark diurnal experiment 1, 48.0 hours post entrainment, Array 7371

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-59


title: Halobacterium NRC-1 dark diurnal experiment 1, 24.0 hours post entrainment, Array 7266

description: Halobacterium NRC-1 dark diurnal experiment 1, 24.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-47

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 24.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness24.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 28.0 hours post entrainment, Array 7341

description: Halobacterium NRC-1 dark diurnal experiment 1, 28.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-50

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 28.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness28.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 68.5 hours post entrainment, Array 7435

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-70


title: Halobacterium NRC-1 dark diurnal experiment 1, 52.0 hours post entrainment, Array 7372

description: Halobacterium NRC-1 dark diurnal experiment 1, 52.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-61

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 52.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness52.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 32.0 hours post entrainment, Array 7304

description: Halobacterium NRC-1 dark diurnal experiment 1, 32.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-51

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 32.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness32.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 28.0 hours post entrainment, Array 7267

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-49


title: Halobacterium NRC-1 dark diurnal experiment 1, 56.0 hours post entrainment, Array 7373

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-63


title: Halobacterium NRC-1 dark diurnal experiment 1, 20.0 hours post entrainment, Array 7303

description: Halobacterium NRC-1 dark diurnal experiment 1, 20.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-46

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 20.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness20.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 52.0 hours post entrainment, Array 7431

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-62

source_name: Standard mid-log Halobacterium NRC-1 reference sample.


title: Halobacterium NRC-1 dark diurnal experiment 1, 12.0 hours post entrainment, Array 7301

description: Halobacterium NRC-1 dark diurnal experiment 1, 12.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-42

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 12.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness12.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 20.0 hours post entrainment, Array 7370

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-45


title: Halobacterium NRC-1 dark diurnal experiment 1, 32.0 hours post entrainment, Array 7342

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-52


title: Halobacterium NRC-1 dark diurnal experiment 1, 24.0 hours post entrainment, Array 7340

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-48


title: Halobacterium NRC-1 dark diurnal experiment 1, 16.0 hours post entrainment, Array 7264

description: Halobacterium NRC-1 dark diurnal experiment 1, 16.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-43

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 16.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness16.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 36.0 hours post entrainment, Array 7343

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-54


title: Halobacterium NRC-1 dark diurnal experiment 1, 08.0 hours post entrainment, Array 7300

description: Halobacterium NRC-1 dark diurnal experiment 1, 08.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-40

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 08.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness08.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 00.0 hours post entrainment, Array 7298

description: Halobacterium NRC-1 dark diurnal experiment 1, 00.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-36

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 00.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness00.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 12.0 hours post entrainment, Array 7263

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-41


title: Halobacterium NRC-1 dark diurnal experiment 1, 04.0 hours post entrainment, Array 7261

description: Halobacterium NRC-1 dark diurnal experiment 1, 04.0 hours post entrainment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-37

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 04.0 hours post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness04.0 minutes post entrainment.


title: Halobacterium NRC-1 dark diurnal experiment 1, 04.0 hours post entrainment, Array 7299

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-38


title: Halobacterium H2O2 exposure experiment, Array 9130

description: H2O2 treated sample grown in standard conditions and sampled 120 minutes post H2O2 treatment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-65

source_name: Halobacterium NRC1, EMS treated sample 120 minutes post H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the presence of 50mM H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 120 minutes post 30min H2O2 treatment.

tag: Halobacterium NRC-1 grown in standard growth media


title: Halobacterium NRC-1 dark diurnal experiment 1, 00.0 hours post entrainment, Array 7366

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-35

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.


title: Halobacterium H2O2 exposure experiment, Array 9131

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-66

tag: H2O2 treated sample grown in standard conditions and sampled 120 minutes post H2O2 treatment


title: Halobacterium H2O2 exposure experiment, Array 9124

description: H2O2 treated sample grown in standard conditions and sampled 40 minutes post H2O2 treatment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-59

source_name: Halobacterium NRC1, EMS treated sample 40 minutes post H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the presence of 50mM H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 40 minutes post 30min H2O2 treatment.


title: Halobacterium H2O2 exposure experiment, Array 9126

description: H2O2 treated sample grown in standard conditions and sampled 50 minutes post H2O2 treatment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-61

source_name: Halobacterium NRC1, EMS treated sample 50 minutes post H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the presence of 50mM H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 50 minutes post 30min H2O2 treatment.


title: Halobacterium H2O2 exposure experiment, Array 9125

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-60

tag: H2O2 treated sample grown in standard conditions and sampled 40 minutes post H2O2 treatment


title: Halobacterium H2O2 exposure experiment, Array 9127

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-62

tag: H2O2 treated sample grown in standard conditions and sampled 50 minutes post H2O2 treatment


title: Halobacterium H2O2 exposure experiment, Array 9087

description: H2O2 treated sample grown in standard conditions and sampled 20 minutes post H2O2 treatment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-56

source_name: Halobacterium NRC1, EMS treated sample 20 minutes post H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the presence of 50mM H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 20 minutes post 30min H2O2 treatment.


title: Halobacterium H2O2 exposure experiment, Array 9046

description: No H2O2 control sample grown in standard conditions and sampled 120 minutes post mock H2O2 treatment versus standard reference

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-50

source_name: Halobacterium NRC1, no H2O2 control, 120 minutes post mock H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the absence of H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 120 minutes post 30min mock H2O2 treatment.

tag: No H2O2 control sample grown in standard conditions and sampled 120 minutes post mock EMS treatment


title: Halobacterium H2O2 exposure experiment, Array 9088

description: H2O2 treated sample grown in standard conditions and sampled 30 minutes post H2O2 treatment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-57

source_name: Halobacterium NRC1, EMS treated sample 30 minutes post H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the presence of 50mM H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 30 minutes post 30min H2O2 treatment.


title: Halobacterium H2O2 exposure experiment, Array 9086

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-55

tag: H2O2 treated sample grown in standard conditions and sampled 20 minutes post H2O2 treatment


title: Halobacterium NRC-1 dark diurnal experiment 1, 40.0 hours post entrainment, Array 7344

description: Halobacterium NRC-1 dark diurnal experiment 1, 40.0 hours post entrainment versus standard reference.

source_name: Halobacterium NRC-1 dark diurnal experiment 1, 40.0 hours post entrainment.

label_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-56

growth_protocol: Halobacterium NRC-1 were grown in aerobic conditions (shaking at 100RPM) at 42degrees C  and entrained for 72 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in darkness40.0 minutes post entrainment.


title: Halobacterium H2O2 exposure experiment, Array 9123

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-58

tag: H2O2 treated sample grown in standard conditions and sampled 30 minutes post H2O2 treatment


title: Halobacterium H2O2 exposure experiment, Array 9128

description: H2O2 treated sample grown in standard conditions and sampled 60 minutes post H2O2 treatment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-63

source_name: Halobacterium NRC1, EMS treated sample 60 minutes post H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the presence of 50mM H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 60 minutes post 30min H2O2 treatment.


title: Halobacterium H2O2 exposure experiment, Array 9129

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-64

tag: H2O2 treated sample grown in standard conditions and sampled 60 minutes post H2O2 treatment


title: Halobacterium H2O2 exposure experiment, Array 9042

description: No H2O2 control sample grown in standard conditions and sampled 50 minutes post mock H2O2 treatment versus standard reference

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-46

source_name: Halobacterium NRC1, no H2O2 control, 50 minutes post mock H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the absence of H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 50 minutes post 30min mock H2O2 treatment.

tag: No H2O2 control sample grown in standard conditions and sampled 50 minutes post mock EMS treatment


title: Halobacterium NRC-1 dark diurnal experiment 1, 08.0 hours post entrainment, Array 7262

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-39


title: Halobacterium H2O2 exposure experiment, Array 9083

description: H2O2 treated sample grown in standard conditions and sampled 0 minutes post H2O2 treatment versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-52

source_name: Halobacterium NRC1, EMS treated sample 0 minutes post H2O2 dose.

growth_protocol: Halobacterium NRC-1 cells grown to mid-log phase in complex media,(OD600 0.5-0.6), incubated 30 minutes in the presence of 50mM H2O2, harvested by centrifugation, resuspended the same volume of complex media, allowed to recover at 37¡C for 0 minutes post 30min H2O2 treatment.