title: Halobacterium oxygen and light perturbation in wild-type cells. Array 6009

description: Halobacterium NRC-1  in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-157

growth_protocol: Halobacterium NRC-1 grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1  in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in wild-type cells. Array 6010

status: Public on Jan 03 2008

type: RNA

city: Seattle

first: Marc

last: Facciotti

state: WA

address: 1441 North 34th Street

country: USA

institute: Institute for Systems Biology

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-158

scan_protocol: ScanArray 5000, using Packard BioChip ScanArray software. See http://www.systemsbiology.org/Scientists_and_Research/Technology/ISB_Facilities/Microarray for microarray scanning details

data_processing: AnalyzerDG software for spotfinding.  see http://www.systemsbiology.org/Scientists_and_Research/Technology/Data_Management/Microarray_Pipeline for more details

label: Alexa 647

molecule: total RNA

organism: Halobacterium salinarum NRC-1

source_name: Halobacterium NRC-1

extract_protocol: Total DNA-free RNA prepared using the Absolutely RNA miniprep kit (Stratagene) and analyzed by PCR to rule out DNA contamination, with Agilent Bioanalyzer to verify integrity, and in the spectrophotometer for quantification.

label: Alexa 532

source_name: Halobacterium standard reference sample

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.

tag: Halobacterium NRC-1 grown in standard growth media


title: Halobacterium oxygen and light perturbation in htr8 deletion strain. Array 6005

description: Halobacterium NRC-1 ura3 and htr8 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-153

source_name: Halobacterium NRC-1 ura3 and htr8 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and htr8 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and htr8 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in htr8 deletion strain. Array 6000

description: Halobacterium NRC-1 ura3 and htr8 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-148

growth_protocol: Halobacterium NRC-1 ura3 and htr8 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and htr8 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in kinA2 deletion strain. Array 6707

description: Halobacterium NRC-1 ura3 and kinA2 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-145

source_name: Halobacterium NRC-1 ura3 and kinA2 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and kinA2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and kinA2 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in phoR deletion strain. Array 6016

description: Halobacterium NRC-1 ura3 and phoR gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-164

source_name: Halobacterium NRC-1 ura3 and phoR gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and phoR gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and phoR gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in htr8 deletion strain. Array 6004

description: Halobacterium NRC-1 ura3 and htr8 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-152

growth_protocol: Halobacterium NRC-1 ura3 and htr8 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and htr8 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in wild-type cells. Array 6008

description: Halobacterium NRC-1  in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-156

growth_protocol: Halobacterium NRC-1 grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1  in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in wild-type cells. Array 6014

description: Halobacterium NRC-1  in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-162

growth_protocol: Halobacterium NRC-1 grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1  in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in wild-type cells. Array 6012

description: Halobacterium NRC-1  in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-160

growth_protocol: Halobacterium NRC-1 grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1  in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in kinA2 deletion strain. Array 6706

description: Halobacterium NRC-1 ura3 and kinA2 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-144

growth_protocol: Halobacterium NRC-1 ura3 and kinA2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and kinA2 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in htr8 deletion strain. Array 6002

description: Halobacterium NRC-1 ura3 and htr8 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-150

growth_protocol: Halobacterium NRC-1 ura3 and htr8 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and htr8 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in htr8 deletion strain. Array 6001

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-149


title: Halobacterium oxygen and light perturbation in htr8 deletion strain. Array 5999

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-147


title: Halobacterium oxygen and light perturbation in kinA2 deletion strain. Array 6708

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-146


title: Halobacterium oxygen and light perturbation in kinA2 deletion strain. Array 6705

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-143


title: Halobacterium oxygen and light perturbation in htr1 deletion strain. Array 6622

description: Halobacterium NRC-1 ura3 and htr1 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-131

source_name: Halobacterium NRC-1 ura3 and htr1 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and htr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and htr1 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in htr1 deletion strain. Array 6625

description: Halobacterium NRC-1 ura3 and htr1 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-137

growth_protocol: Halobacterium NRC-1 ura3 and htr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and htr1 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in htr1 deletion strain. Array 6628

description: Halobacterium NRC-1 ura3 and htr1 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-133

growth_protocol: Halobacterium NRC-1 ura3 and htr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and htr1 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in kinA2 deletion strain. Array 6704

description: Halobacterium NRC-1 ura3 and kinA2 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-142

growth_protocol: Halobacterium NRC-1 ura3 and kinA2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and kinA2 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in kinA2 deletion strain. Array 5989

description: Halobacterium NRC-1 ura3 and kinA2 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-139

growth_protocol: Halobacterium NRC-1 ura3 and kinA2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and kinA2 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in htr1 deletion strain. Array 6624

description: Halobacterium NRC-1 ura3 and htr1 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-136

growth_protocol: Halobacterium NRC-1 ura3 and htr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and htr1 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in kinA2 deletion strain. Array 6629

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-140

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.

tag: Halobacterium NRC-1 grown in standard growth media


title: Halobacterium oxygen and light perturbation in boa4 deletion strain. Array 5979

description: Halobacterium NRC-1 ura3 and boa4 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-129

source_name: Halobacterium NRC-1 ura3 and boa4 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and boa4 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and boa4 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in boa4 deletion strain. Array 5973

description: Halobacterium NRC-1 ura3 and boa4 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-123

growth_protocol: Halobacterium NRC-1 ura3 and boa4 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and boa4 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in htr1 deletion strain. Array 5985

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-135


title: Halobacterium oxygen and light perturbation in boa1 deletion strain. Array 5941

description: Halobacterium NRC-1 ura3 and boa1 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-108

source_name: Halobacterium NRC-1 ura3 and boa1 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and boa1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and boa1 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in htr1 deletion strain. Array 6626

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-138


title: Halobacterium oxygen and light perturbation in boa1 deletion strain. Array 5943

description: Halobacterium NRC-1 ura3 and boa1 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-110

growth_protocol: Halobacterium NRC-1 ura3 and boa1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and boa1 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in boa1 deletion strain. Array 5945

description: Halobacterium NRC-1 ura3 and boa1 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-112

growth_protocol: Halobacterium NRC-1 ura3 and boa1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and boa1 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in boa4 deletion strain. Array 5976

description: Halobacterium NRC-1 ura3 and boa4 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-126

growth_protocol: Halobacterium NRC-1 ura3 and boa4 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and boa4 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in ark deletion strain. Array 5970

description: Halobacterium NRC-1 ura3 and ark gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-120

source_name: Halobacterium NRC-1 ura3 and ark gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and ark gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and ark gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in ark deletion strain. Array 6621

description: Halobacterium NRC-1 ura3 and ark gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-116

growth_protocol: Halobacterium NRC-1 ura3 and ark gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and ark gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in boa4 deletion strain. Array 5978

description: Halobacterium NRC-1 ura3 and boa4 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-128

growth_protocol: Halobacterium NRC-1 ura3 and boa4 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and boa4 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in ark deletion strain. Array 5972

description: Halobacterium NRC-1 ura3 and ark gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-122

growth_protocol: Halobacterium NRC-1 ura3 and ark gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and ark gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in boa4 deletion strain. Array 5980

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-130


title: Halobacterium oxygen and light perturbation in kinA2 deletion strain. Array 6703

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-141


title: Halobacterium oxygen and light perturbation in ark deletion strain. Array 5968

description: Halobacterium NRC-1 ura3 and ark gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-118

growth_protocol: Halobacterium NRC-1 ura3 and ark gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and ark gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in boa1 deletion strain. Array 5942

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-109


title: Halobacterium oxygen and light perturbation in htr1 deletion strain. Array 6623

description: Halobacterium NRC-1 ura3 and htr1 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-132

growth_protocol: Halobacterium NRC-1 ura3 and htr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and htr1 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in boa4 deletion strain. Array 5975

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-125


title: Halobacterium oxygen and light perturbation in ark deletion strain. Array 5967

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-117


title: Halobacterium oxygen and light perturbation in ark deletion strain. Array 5969

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-119


title: Halobacterium oxygen and light perturbation in boa4 deletion strain. Array 5977

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-127


title: Halobacterium oxygen and light perturbation in boa1 deletion strain. Array 5940

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-107


title: Halobacterium oxygen and light perturbation in boa1 deletion strain. Array 5947

description: Halobacterium NRC-1 ura3 and boa1 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-114

growth_protocol: Halobacterium NRC-1 ura3 and boa1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and boa1 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in boa4 deletion strain. Array 5974

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-124


title: Halobacterium oxygen and light perturbation in boa1 deletion strain. Array 5944

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-111


title: Halobacterium oxygen and light perturbation in htr1 deletion strain. Array 5984

description: Halobacterium NRC-1 ura3 and htr1 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-134

growth_protocol: Halobacterium NRC-1 ura3 and htr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and htr1 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in boa1 deletion strain. Array 5946

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-113


title: Halobacterium oxygen and light perturbation in vng750c deletion strain. Array 6619

description: Halobacterium NRC-1 ura3 and vng750c gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-105

source_name: Halobacterium NRC-1 ura3 and vng750c gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and vng750c gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and vng750c gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in ark deletion strain. Array 5971

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-121


title: Halobacterium oxygen and light perturbation in ark deletion strain. Array 5965

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-115


title: Halobacterium oxygen and light perturbation in vng750c deletion strain. Array 6618

description: Halobacterium NRC-1 ura3 and vng750c gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-103

growth_protocol: Halobacterium NRC-1 ura3 and vng750c gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and vng750c gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in vng750c deletion strain. Array 5939

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-106

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.

tag: Halobacterium NRC-1 grown in standard growth media


title: Halobacterium oxygen and light perturbation in vng750c deletion strain. Array 5937

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-104


title: Halobacterium oxygen and light perturbation in vng750c deletion strain. Array 5935

description: Halobacterium NRC-1 ura3 and vng750c gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-102

growth_protocol: Halobacterium NRC-1 ura3 and vng750c gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and vng750c gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in htlD deletion strain. Array 5926

description: Halobacterium NRC-1 ura3 and htlD gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-95

source_name: Halobacterium NRC-1 ura3 and htlD gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and htlD gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and htlD gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in vng750c deletion strain. Array 5934

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-101


title: Halobacterium oxygen and light perturbation in htlD deletion strain. Array 5929

description: Halobacterium NRC-1 ura3 and htlD gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-98

growth_protocol: Halobacterium NRC-1 ura3 and htlD gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and htlD gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in afsQ2 deletion strain. Array 5915

description: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-84

source_name: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in vng750c deletion strain. Array 5932

description: Halobacterium NRC-1 ura3 and vng750c gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-99

growth_protocol: Halobacterium NRC-1 ura3 and vng750c gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and vng750c gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in afsQ2 deletion strain. Array 5917

description: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-86

growth_protocol: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in htlD deletion strain. Array 5927

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-96


title: Halobacterium oxygen and light perturbation in afsQ2 deletion strain. Array 5920

description: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-89

growth_protocol: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in afsQ2 deletion strain. Array 5916

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-85


title: Halobacterium oxygen and light perturbation in htlD deletion strain. Array 5924

description: Halobacterium NRC-1 ura3 and htlD gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-93

growth_protocol: Halobacterium NRC-1 ura3 and htlD gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and htlD gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in afsQ2 deletion strain. Array 5921

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-90


title: Halobacterium oxygen and light perturbation in afsQ2 deletion strain. Array 5918

description: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-87

growth_protocol: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and afsQ2 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in htlD deletion strain. Array 6617

description: Halobacterium NRC-1 ura3 and htlD gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-91

growth_protocol: Halobacterium NRC-1 ura3 and htlD gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and htlD gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in afsQ2 deletion strain. Array 5919

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-88


title: Halobacterium oxygen and light perturbation in vng750c deletion strain. Array 5933

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-100


title: Halobacterium oxygen and light perturbation in htlD deletion strain. Array 5923

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-92


title: Halobacterium oxygen and light perturbation in htlD deletion strain. Array 5928

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-97


title: Halobacterium oxygen and light perturbation in afsQ2 deletion strain. Array 5914

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-83


title: Halobacterium oxygen and light perturbation in htlD deletion strain. Array 5925

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-94


title: Halobacterium oxygen and light perturbation in sop2 deletion strain. Array 5912

description: Halobacterium NRC-1 ura3 and sop2 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-81

source_name: Halobacterium NRC-1 ura3 and sop2 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and sop2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and sop2 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in sop2 deletion strain. Array 5911

description: Halobacterium NRC-1 ura3 and sop2 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-80

growth_protocol: Halobacterium NRC-1 ura3 and sop2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and sop2 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in sop2 deletion strain. Array 5910

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-79


title: Halobacterium oxygen and light perturbation in sop2 deletion strain. Array 5909

description: Halobacterium NRC-1 ura3 and sop2 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-78

growth_protocol: Halobacterium NRC-1 ura3 and sop2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and sop2 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in sop2 deletion strain. Array 5957

description: Halobacterium NRC-1 ura3 and sop2 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-75

growth_protocol: Halobacterium NRC-1 ura3 and sop2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and sop2 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in sop2 deletion strain. Array 5913

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-82


title: Halobacterium oxygen and light perturbation in phr2 deletion strain. Array 5905

description: Halobacterium NRC-1 ura3 and phr2 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-74

source_name: Halobacterium NRC-1 ura3 and phr2 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and phr2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and phr2 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in sop2 deletion strain. Array 5907

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-76


title: Halobacterium oxygen and light perturbation in sop2 deletion strain. Array 5908

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-77


title: Halobacterium oxygen and light perturbation in phr2 deletion strain. Array 5899

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-73


title: Halobacterium oxygen and light perturbation in bop deletion strain. Array 5888

description: Halobacterium NRC-1 ura3 and bop gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-62

source_name: Halobacterium NRC-1 ura3 and bop gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and bop gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and bop gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in bop deletion strain. Array 5890

description: Halobacterium NRC-1 ura3 and bop gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-64

growth_protocol: Halobacterium NRC-1 ura3 and bop gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and bop gene knockouts in low oxygen and in light.

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.

tag: Halobacterium NRC-1 grown in standard growth media


title: Halobacterium oxygen and light perturbation in bop deletion strain. Array 5892

description: Halobacterium NRC-1 ura3 and bop gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-66

growth_protocol: Halobacterium NRC-1 ura3 and bop gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and bop gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in bop deletion strain. Array 5956

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-65


title: Halobacterium oxygen and light perturbation in phr2 deletion strain. Array 5894

description: Halobacterium NRC-1 ura3 and phr2 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-68

growth_protocol: Halobacterium NRC-1 ura3 and phr2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and phr2 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in bop deletion strain. Array 5887

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-61


title: Halobacterium oxygen and light perturbation in phr2 deletion strain. Array 5893

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-67


title: Halobacterium oxygen and light perturbation in phr2 deletion strain. Array 5895

description: Halobacterium NRC-1 ura3 and phr2 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-69

growth_protocol: Halobacterium NRC-1 ura3 and phr2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and phr2 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in bop deletion strain. Array 5889

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-63


title: Halobacterium oxygen and light perturbation in bop deletion strain. Array 5886

description: Halobacterium NRC-1 ura3 and bop gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-60

growth_protocol: Halobacterium NRC-1 ura3 and bop gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and bop gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in phr2 deletion strain. Array 5896

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-70


title: Halobacterium oxygen and light perturbation in phr1 and phr2 deletion strain. Array 5884

description: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-58

source_name: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in phr1 and phr2 deletion strain. Array 5882

description: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-56

growth_protocol: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in phr2 deletion strain. Array 5898

description: Halobacterium NRC-1 ura3 and phr2 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-72

growth_protocol: Halobacterium NRC-1 ura3 and phr2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and phr2 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in phr2 deletion strain. Array 5897

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-71


title: Halobacterium oxygen and light perturbation in bop deletion strain. Array 5885

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-59


title: Halobacterium oxygen and light perturbation in phr1 and phr2 deletion strain. Array 5883

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-57


title: Halobacterium oxygen and light perturbation in phr1 and phr2 deletion strain. Array 5881

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-55


title: Halobacterium oxygen and light perturbation in phr1 and phr2 deletion strain. Array 5960

description: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-51

growth_protocol: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in ura3 deletion strain. Array 5876

description: Halobacterium NRC-1 ura3 knockout in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-50

source_name: Halobacterium NRC-1 ura3 knockout.

growth_protocol: Halobacterium NRC-1 ura3 knockout grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 knockout in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in ura3 deletion strain. Array 4802

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-49


title: Halobacterium oxygen and light perturbation in ura3 deletion strain. Array 4800

description: Halobacterium NRC-1 ura3 knockout in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-47

growth_protocol: Halobacterium NRC-1 ura3 knockout grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 knockout in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in phr1 and phr2 deletion strain. Array 5963

description: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-53

growth_protocol: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and phr1 and phr2 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in phr1 and phr2 deletion strain. Array 5878

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-52


title: Halobacterium oxygen and light perturbation in phr1 and phr2 deletion strain. Array 5880

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-54


title: Halobacterium oxygen and light perturbation in phr1 deletion strain. Array 4793

description: Halobacterium NRC-1 ura3 and phr1 gene knockouts in low oxygen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-40

source_name: Halobacterium NRC-1 ura3 and phr1 gene knockouts.

growth_protocol: Halobacterium NRC-1 ura3 and phr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in light.

tag: Halobacterium NRC-1 ura3 and phr1 gene knockouts in low oxygen and in light.


title: Halobacterium oxygen and light perturbation in phr1 deletion strain. Array 4792

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-39

source_name: Halobacterium standard reference sample


title: Halobacterium oxygen and light perturbation in phr1 deletion strain. Array 4791

description: Halobacterium NRC-1 ura3 and phr1 gene knockouts in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-38

growth_protocol: Halobacterium NRC-1 ura3 and phr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and phr1 gene knockouts in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in ura3 deletion strain. Array 4797

description: Halobacterium NRC-1 ura3 knockout in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-44

growth_protocol: Halobacterium NRC-1 ura3 knockout grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 knockout in high oxgen and in light.


title: Halobacterium oxygen and light perturbation in ura3 deletion strain. Array 4799

description: Halobacterium NRC-1 ura3 knockout in high oxgen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-46

growth_protocol: Halobacterium NRC-1 ura3 knockout grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 knockout in high oxgen and in dark.


title: Halobacterium oxygen and light perturbation in phr1 deletion strain. Array 5958

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-37


title: Halobacterium oxygen and light perturbation in phr1 deletion strain. Array 4795

description: Halobacterium NRC-1 ura3 and phr1 gene knockouts in low oxygen and in dark versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-42

growth_protocol: Halobacterium NRC-1 ura3 and phr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in low oxygen (shaking at 100RPM in stoppered flask) and in dark (painted flask).

tag: Halobacterium NRC-1 ura3 and phr1 gene knockouts in low oxygen and in dark.


title: Halobacterium oxygen and light perturbation in ura3 deletion strain. Array 4798

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-45

growth_protocol: Standard mid-log phase (OD600 - 0.5-0.6) Halobacterium NRC-1 reference sample.

tag: Halobacterium NRC-1 grown in standard growth media


title: Halobacterium oxygen and light perturbation in ura3 deletion strain. Array 4801

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-48


title: Halobacterium oxygen and light perturbation in phr1 deletion strain. Array 5959

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-41


title: Halobacterium oxygen and light perturbation in phr1 deletion strain. Array 4788

description: Halobacterium NRC-1 ura3 and phr1 gene knockouts in high oxgen and in light versus standard reference.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-35

growth_protocol: Halobacterium NRC-1 ura3 and phr1 gene knockouts grown in rich media (CM) to mid-log phase (50mL culture in 125mL flask) in high oxgen (shaking at 210RPM)  and in light.

tag: Halobacterium NRC-1 ura3 and phr1 gene knockouts in high oxgen and in light.


title: Halobacterium NRC-1 light diurnal experiment 2, 5760 minutes post entrainment, Array 4760

description: Halobacterium NRC-1 light diurnal experiment 2, 5760minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-84

label: Alexa 660

source_name: Halobacterium NRC-1 light diurnal experiment 2, 5760 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _576 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 5760 minutes post entrainment.

label: Alexa 594

source_name: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3960 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled in light 3960 minutes post entrainment.


title: Halobacterium oxygen and light perturbation in ura3 deletion strain. Array 4796

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-43


title: Halobacterium oxygen and light perturbation in phr1 deletion strain. Array 4789

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-36


title: Halobacterium NRC-1 light diurnal experiment 2, 5580 minutes post entrainment, Array 3888

description: Halobacterium NRC-1 light diurnal experiment 2, 5580minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-82

source_name: Halobacterium NRC-1 light diurnal experiment 2, 5580 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _558 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 5580 minutes post entrainment.

tag: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3960 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 5400 minutes post entrainment, Array 4751

description: Halobacterium NRC-1 light diurnal experiment 2, 5400minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-80

source_name: Halobacterium NRC-1 light diurnal experiment 2, 5400 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _540 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 5400 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 5760 minutes post entrainment, Array 4752

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-83


title: Halobacterium NRC-1 light diurnal experiment 2, 5580 minutes post entrainment, Array 4701

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-81


title: Halobacterium NRC-1 light diurnal experiment 2, 5400 minutes post entrainment, Array 4750

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-79


title: Halobacterium NRC-1 light diurnal experiment 2, 5220 minutes post entrainment, Array 4759

description: Halobacterium NRC-1 light diurnal experiment 2, 5220minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-77

source_name: Halobacterium NRC-1 light diurnal experiment 2, 5220 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _522 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 5220 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 5040 minutes post entrainment, Array 4746

description: Halobacterium NRC-1 light diurnal experiment 2, 5040minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-75

source_name: Halobacterium NRC-1 light diurnal experiment 2, 5040 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _504 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 5040 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 5040 minutes post entrainment, Array 4747

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-76


title: Halobacterium NRC-1 light diurnal experiment 2, 5220 minutes post entrainment, Array 4749

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-78


title: Halobacterium NRC-1 light diurnal experiment 2, 4680 minutes post entrainment, Array 4706

description: Halobacterium NRC-1 light diurnal experiment 2, 4680minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-72

source_name: Halobacterium NRC-1 light diurnal experiment 2, 4680 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _468 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 4680 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 4500 minutes post entrainment, Array 4703

description: Halobacterium NRC-1 light diurnal experiment 2, 4500minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-69

source_name: Halobacterium NRC-1 light diurnal experiment 2, 4500 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _450 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 4500 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 4860 minutes post entrainment, Array 4745

description: Halobacterium NRC-1 light diurnal experiment 2, 4860minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-74

source_name: Halobacterium NRC-1 light diurnal experiment 2, 4860 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _486 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 4860 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 3600 minutes post entrainment, Array 4694

description: Halobacterium NRC-1 light diurnal experiment 2, 3600minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-60

source_name: Halobacterium NRC-1 light diurnal experiment 2, 3600 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _360 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3600 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 4320 minutes post entrainment, Array 3887

description: Halobacterium NRC-1 light diurnal experiment 2, 4320minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-67

source_name: Halobacterium NRC-1 light diurnal experiment 2, 4320 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _432 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 4320 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 4320 minutes post entrainment, Array 4702

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-68


title: Halobacterium NRC-1 light diurnal experiment 2, 3780 minutes post entrainment, Array 4696

description: Halobacterium NRC-1 light diurnal experiment 2, 3780minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-62

source_name: Halobacterium NRC-1 light diurnal experiment 2, 3780 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _378 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3780 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 4140 minutes post entrainment, Array 4699

description: Halobacterium NRC-1 light diurnal experiment 2, 4140minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-65

source_name: Halobacterium NRC-1 light diurnal experiment 2, 4140 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _414 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 4140 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 4500 minutes post entrainment, Array 4704

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-70


title: Halobacterium NRC-1 light diurnal experiment 2, 4860 minutes post entrainment, Array 4744

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-73


title: Halobacterium NRC-1 light diurnal experiment 2, 3780 minutes post entrainment, Array 4695

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-61


title: Halobacterium NRC-1 light diurnal experiment 2, 3960 minutes post entrainment, Array 4697

description: Halobacterium NRC-1 light diurnal experiment 2, 3960minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-63

source_name: Halobacterium NRC-1 light diurnal experiment 2, 3960 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _396 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3960 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 3600 minutes post entrainment, Array 4693

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-59


title: Halobacterium NRC-1 light diurnal experiment 2, 4140 minutes post entrainment, Array 4700

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-66


title: Halobacterium NRC-1 light diurnal experiment 2, 3240 minutes post entrainment, Array 4687

description: Halobacterium NRC-1 light diurnal experiment 2, 3240minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-56

source_name: Halobacterium NRC-1 light diurnal experiment 2, 3240 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _324 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3240 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 3420 minutes post entrainment, Array 4689

description: Halobacterium NRC-1 light diurnal experiment 2, 3420minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-58

source_name: Halobacterium NRC-1 light diurnal experiment 2, 3420 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _342 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3420 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 3960 minutes post entrainment, Array 4698

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-64


title: Halobacterium NRC-1 light diurnal experiment 2, 4680 minutes post entrainment, Array 4761

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-71


title: Halobacterium NRC-1 light diurnal experiment 2, 2160 minutes post entrainment, Array 3906

description: Halobacterium NRC-1 light diurnal experiment 2, 2160minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-44

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2160 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _216 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2160 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 3060 minutes post entrainment, Array 4685

description: Halobacterium NRC-1 light diurnal experiment 2, 3060minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-54

source_name: Halobacterium NRC-1 light diurnal experiment 2, 3060 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _306 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3060 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 3420 minutes post entrainment, Array 4688

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-57

source_name: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3960 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled in light 3960 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 2700 minutes post entrainment, Array 4681

description: Halobacterium NRC-1 light diurnal experiment 2, 2700minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-50

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2700 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _270 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2700 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 2880 minutes post entrainment, Array 4683

description: Halobacterium NRC-1 light diurnal experiment 2, 2880minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-52

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2880 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _288 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2880 minutes post entrainment.

tag: Halobacterium NRC-1 light diurnal experiment 2 reference sample grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 3960 minutes post entrainment.


title: Halobacterium NRC-1 light diurnal experiment 2, 2520 minutes post entrainment, Array 4679

description: Halobacterium NRC-1 light diurnal experiment 2, 2520minutes post entrainment versus reference selected 3960 minutes post entrainment.

hyb_protocol: see Baliga NS, Bjork SJ, Bonneau R, Pan M, Iloanusi C, Kottemann MC, Hood L, DiRuggiero J. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1.Genome Res. 2004 Jun;14(6):1025-48

source_name: Halobacterium NRC-1 light diurnal experiment 2, 2520 minutes post entrainment.

growth_protocol: Halobacterium NRC-1 were grown in anaerobic conditions at 38degrees C  and entrained for 120 hours with 12:12hr light:dark cycle at a light intensity of 150µE/M^2/sec. and sampled in the light _252 minutes post entrainment.

tag: Halobacterium NRC-1 dark diurnal experiment 2 with cells grown at 38degrees C in anaerobic conditions and entrained for 120 hours with 12:12hr light:dark cycle and sampled 2520 minutes post entrainment.