title: LIVER_PROGESTERONE_11.3mg/kg_5days_exp3455_rep2_17209

description:
HybID: 17209
treated sample for experiment (RepID) 3455
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223644: LIVER_PROGESTERONE_11.3mg/kg_5days_exp3455_rep1_14853
Replicate experimental sample: GSM223646: LIVER_PROGESTERONE_11.3mg/kg_5days_exp3455_rep3_17210
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PROGESTERONE, 11.3mg/kg, 5 days

value: PROGESTERONE

value: DAILY

value: 5 days


title: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep3_80549

status: Public on Mar 28 2008

type: RNA

city: Mountain View

first: Jeremy

last: Gollub

state: CA

address: 325 E. Middlefield Rd.

country: USA

institute: Iconix Biosciences

description:
HybID: 80549
treated sample for experiment (RepID) 4734
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223668: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep2_80548
Replicate experimental sample: GSM223667: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep1_80940
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

hyb_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. 12.5 ug of cRNA sample was fragmented in 40 mM Tris-acetate (TrisOAc) pH7.9, 100 mM KOAc and 31.5 mM MgOAc at 94oC for 20 min. This typically resulted in a fragmented cRNA with a size range between 100 to 200 bases. 10 ug of the fragmented cRNA was used for hybridization of each Rat-Uniset I (RU1) Expression BioArray (Amersham Biosciences, Piscataway, NJ) in a volume of 260 ul, containing 78 ul of CodeLink Hyb buffer component A and 130 ul of CodeLink Hyb buffer component B (Amersham Biosciences, Piscataway, NJ). The hybridization solution was denatured at 90oC for 5 min then chilled on ice. The sample was vortexed at maximum speed for 5 sec and centrifuged at maximum speed for 5 min before 250 ul of the solution was injected into the inlet port of the flex-hybridization chamber, and placed in a CodeLink 12-slide shaker tray. The hybridization ports were sealed with 1 cm sealing strips (Amersham Biosciences, Piscataway, NJ), and the shaker tray(s) containing the slides was loaded into a New Brunswick Innova 4080 shaking incubator, with the hybridization chambers facing up. Slides were incubated for 20 hr at 37oC, while shaking at 300 rpm. The 12-slide shaker tray was removed from the shaker, and the hybridization chamber removed from each slide. Each slide was placed into the BioArray Rack of the Parallel Processing Tool (Amersham Biosciences, Piscataway, NJ) and incubated with 0.75x TNT (0.075 M Tris-HCl, pH7.6, 0.1125 M NaCl, 0.0375 % Tween-20) at 46oC for 1hr. The BioArray Rack was moved from the TNT containing reservoir to the small reagent reservoir containing 1:500 dilution of streptavidin-Alexa 647 (Molecular Probes, Eugene, OR). The signal was developed for 30 min at room temperature, before the reaction was stopped and slides were washed four times for 5 min each in TNT buffer (0.1 M Tris-HCl, pH7.6, 0.15 M NaCl, 0.05% Tween-20) using a large reagent reservoir. The slides were rinsed in ddH2O with 0.05% Tween-20 twice for 5 sec each before they were dried by centrifugation with a Qiagen Sigma 4-15C centrifuge (Valencia, CA) using a swinging bucket rotor (2x96) for exactly 3 min at 2000rpm (acceleration at position 9 and deceleration at position 9). The dried slides were stored in light protective slide boxes at room temperature prior to scanning.

scan_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The Axon GenePix Scanner (Axon Instrument, Union City, CA) was calibrated using the Calibration Slide supplied by Axon Instrument with GenePix 4.0 at 635 nm using the Calibration System. After calibration of the scanner, all processed slides were scanned with the laser set to 635 nm, the photomultiplier tube (PMT) voltage to 600 and the scan resolution to 10 microns. For consistency all slides were scanned the same day of color development, within an hour after dry spinning them and the data was analyzed using the CodeLink Expression Analysis Software version 2.2.25 (Amersham Biosciences, Piscataway, NJ).

data_processing: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44, supplemental methods.  Prior to statistical computation, the spot reading data was normalized. For this purpose a new nonlinear normalization procedure, similar to the centralization approach reported in the literature (Zien et al., 2001) was developed for the CodeLink array platform. The normalization procedure uses proprietary algorithm that assumes that in general, for an array with many probes, the majority of the signal represents genes that have unchanged expressions compared to controls, with the extreme values representing the true biology of the process and not some artifact due to measurement noise. The algorithm does not make the assumption that the true mRNA abundance being measured is linearly proportional to the spot reading signal or any assumption about the error distribution of such signals or their differential. Rather, the assumption of unchanged signals representing the bulk of the signal measurements is used to center a nonlinear curve fit to a reference template. This reference template is constructed for a large set of time matched, same tissue and same vehicle, control arrays, computing a median log signal for each probe. The replicate size of this set is adequate to ensure very small random error in the ensemble signal level for each reference probe. The curve fit corrects for some array processing problems, such as partial signal saturation, and improves the overall quality of the data compared to simple linear normalization methods. Essentially the curve tracks the mode of the signal distribution for sets of genes against the expected value for that set.

label: biotin

molecule: polyA RNA

organism: Rattus norvegicus

source_name: LIVER, PROMAZINE, 100mg/kg, 1 days

label_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The methods used for cRNA preparation (cDNA synthesis, cRNA preparation, and cRNA purification) are essentially as described in the CodeLink™ manual v2.1 as supplied by Amersham Biosciences (Piscataway, NJ) using the Qiagen BioRobot 9604 (Valencia, CA). cDNA synthesis, cRNA preparation, and cRNA purification were completely processed in a 96-well format using the automated Qiagen BioRobot 9604 procedure. 0.6 – 20 ìg of enriched RNA from different tissue sources were added to a reaction mixture in a final volume of 12 ìl, containing bacterial control RNA (1.5pg FixA, 5pgYjeK, 5pg AraB, 15pg EntF, 50pg FixB, 150pg HisB, 500pg LeuB, 1500pg gnd) and 1.0 ìl of 100 pmol ìl-1 T7-(dT)24 oligonucleotide primer (Proligo, Boulder, CO). The T7-(dT)24 oligonucleotide primer used, is an HPLC purified 63-mer with the sequence : 5'-GGCCAGTGAATTGTAATACGACTCACTATAGGGAGGCGGTTTTTTTTTTTTTTTTTTTTTTTT-3'. The mixture was incubated for 10 min at 70oC and chilled on ice. On ice, 4 ul of 5x first-strand buffer, 2 ul 0.1 M DTT, 1 ul of 10 mM dNTP mix and 1 ul Superscript™II RNaseH-reverse transcriptase (200 U/ul) were added to the mixture to make a final volume of 20 ul. The mixture was incubated for 1 hr at 37oC. Second-strand cDNA was synthesized in a volume of 150 ul, containing 92 ul nuclease-free water, 30 ul of 5x second-strand buffer, 3 ul of 10 mM dNTP mix, 4 ul of Escherichia coli DNA polymerase I (10 U/ìl) and 1 ul of RNase H (2 U/ul) for 2 hr at 16oC. The cDNA was purified using a Qiagen QIAquick purification kit, and completely dried down using a Speed-Vac concentrator (45oC) for 2 hr. The dried product was resuspended in IVT reaction mix containing 3.0 ul of nuclease-free water, 4.0 ul 10x reaction buffer, 4.0 ul 75 mM ATP, 4.0 ul 75 mM GTP, 3.0 ul 75 mM CTP, 3.0 ul 75 mM UTP, 7.5 ul 10 mM Biotin 11-CTP, 7.5 ul 10 mM Biotin 11-UTP and 4.0 ul enzyme mix. The reaction mix was incubated for 14 hr at 37oC using an MJ Research 96-well PTC-200 Thermal Cycler (MJ Research, Waltham, MA), before the cRNA was purified using a Qiagen RNeasy® kit. The resulting cRNA yield was quantified using the 96-well ìQuan Universal Microplate Spectrophotometer Model MQX200 (BIO-TEK Instruments Inc., Winooski, VT) at a wavelength of 260 nm. Conformance of the cRNA sample to historical size distributions (the bulk of the cRNA product should be between 500 and 3,000 bases in size) was confirmed using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA). Samples not near the historical norm were reprocessed starting from tissue or RNA.

growth_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Sprague-Dawley (Crl:CD®(SD)|GS BR) rats (aged 6-8 weeks and weighing 200 - 260 g), were purchased from Charles River Laboratories (Wilmington, MA). They were housed in plastic cages for 1 week for acclimation to the laboratory environment of a ventilated room (temperature, 22oC ±3oC; humidity, 30 - 70%; light/dark cycle, 12 h d-1, 6:00am - 6:00pm) until use. Certified Rodent Diet #5002 (PMI Feeds Inc.) and chlorinated tap water was available ad libitum.

extract_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. Following sacrifice, 6 mm disposable biopsy punches (#REF 33-36 Miltex, Inc. Bethpage, NY) were used to obtain tissue samples of approximately 100 mg. Samples were placed in cryogenic tubes and snap frozen. Poly A(+)-RNA from tissue samples was isolated using the MagNA Pure LC robot (Roche, Basel, Switzerland) in combination with the MagNA Pure LC mRNA Isolation kit I and II (Roche, Basel, Switzerland) for cells (see supplemental methods section) and tissues, respectively. Tissue samples were completely homogenized directly from ~100 mg punches stored on dry ice prior to application of lysis buffer to a final concentration of 65 mg tissue per ml of buffer. After complete homogenization, using disposable Omni Tip Disposable Generator Probes (Omni Inc, Warrenton, VA) and before loading of the samples into the 32-well MagNA Pure plate, the samples were drawn up 5-6 times through a 20-gauge needle attached to a 3-ml syringe to ensure any tissue pieces or clumps were removed from the lysate prior to robotic processing. Tissue sample processing was performed in duplicate wells (loading 150 ul of homogenized sample to each well) of the MagNA Pure LC, which is programmed to extract mRNA using the oligo-dT selection method into a final elution volume of 100 ul. Poly A(+) RNA sample concentration was performed manually using a standard ethanol precipitation protocol in the presence of glycogen (50 ug/ml). After precipitation the final purified RNA sample was resuspended in 7 ìl DEPC-H2O and quantified using a Ribogreen high-range assay (Molecular Probes) on the Wallac Victor2 Fluorometer (Perkin-Elmer, Fremont, CA). Additionally, the integrity of each RNA sample was determined, by comparison to historical standards (no gross degradation should be visible as suggested by clear 18S and 28S peaks on top of a hump of complex RNA, with lower amounts of RNA below 18S than under and above the 18S peak), using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA) in combination with the RNA 6000 Nano Lab Chip kit (Agilent Technologies).

treatment_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Compounds were administered via the route of administration (ROA) that corresponds to that by which humans receive the drug. Compounds were typically administered orally (PO) (83%), intravenously (IV) (9.4%), subcutaneously (SC) (5.7%), or intraperitoneally (IP) (2%). If the compound is a toxicant or a biochemical standard, it was administered orally. For oral dosing, the vehicle choice largely depends on the solubility of the compound in water. Water-soluble compounds were administered in water. Insoluble compounds are administered in either corn oil or 0.5% carboxymethylcellulose (CMC) using the best literature recommendation as a guide. IV administered compounds were usually dissolved in saline and SC administered compounds in corn oil. The highest dose the rats receive is the Maximum Tolerated Dose (MTD). The dosing of animals was staggered based on intended harvest order to ensure that sacrifice occurred within 30 minutes of the recorded time point. Dosing frequency was as described in Sample_characteristics for the particular treatment.

tag: Sprague-Dawley

tag: age

value: 6 to 8 weeks

tag: sex

value: male

tag: tissue

value: LIVER

tag: treatment compound

value: PROMAZINE

tag: dose

value: 100 mg/kg

tag: solvent

value: CORN OIL

tag: administration route

value: ORAL GAVAGE

tag: frequency of dosing

tag: treatment duration

value: 1 days

tag: experiment date


title: LIVER_BROMFENAC_5mg/kg_5days_exp6044_rep2_85590

description:
HybID: 85590
treated sample for experiment (RepID) 6044
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221008: LIVER_BROMFENAC_5mg/kg_5days_exp6044_rep1_85591
Replicate experimental sample: GSM221010: LIVER_BROMFENAC_5mg/kg_5days_exp6044_rep3_85592
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BROMFENAC, 5mg/kg, 5 days

value: BROMFENAC

value: 5 mg/kg

value: CMC


title: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep2_80548

description:
HybID: 80548
treated sample for experiment (RepID) 4734
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223669: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep3_80549
Replicate experimental sample: GSM223667: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep1_80940
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_PROGESTERONE_11.3mg/kg_5days_exp3455_rep3_17210

description:
HybID: 17210
treated sample for experiment (RepID) 3455
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223644: LIVER_PROGESTERONE_11.3mg/kg_5days_exp3455_rep1_14853
Replicate experimental sample: GSM223645: LIVER_PROGESTERONE_11.3mg/kg_5days_exp3455_rep2_17209
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep1_80940

description:
HybID: 80940
treated sample for experiment (RepID) 4734
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223668: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep2_80548
Replicate experimental sample: GSM223669: LIVER_PROMAZINE_100mg/kg_1days_exp4734_rep3_80549
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep2_85585

description:
HybID: 85585
treated sample for experiment (RepID) 6036
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221004: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep3_85584
Replicate experimental sample: GSM221002: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep1_85586
Matched control sample: GSM204808: LIVER_vehicle_NA_5days_control_NA_85526
Matched control sample: GSM204874: LIVER_vehicle_NA_5days_control_NA_85536
Matched control sample: GSM204676: LIVER_vehicle_NA_1days_control_NA_85576
Matched control sample: GSM204767: LIVER_vehicle_NA_3days_control_NA_85579
Matched control sample: GSM204829: LIVER_vehicle_NA_5days_control_NA_85582
Matched control sample: GSM204702: LIVER_vehicle_NA_1days_control_NA_85602
Matched control sample: GSM204653: LIVER_vehicle_NA_1days_control_NA_85604
Matched control sample: GSM204749: LIVER_vehicle_NA_3days_control_NA_85605
Matched control sample: GSM204788: LIVER_vehicle_NA_3days_control_NA_85607
Matched control sample: GSM204841: LIVER_vehicle_NA_5days_control_NA_85609
Matched control sample: GSM204668: LIVER_vehicle_NA_1days_control_NA_85835
Matched control sample: GSM204709: LIVER_vehicle_NA_1days_control_NA_85837
Matched control sample: GSM204734: LIVER_vehicle_NA_3days_control_NA_85839
Matched control sample: GSM204822: LIVER_vehicle_NA_5days_control_NA_85841
Matched control sample: GSM204864: LIVER_vehicle_NA_5days_control_NA_85843
Matched control sample: GSM204848: LIVER_vehicle_NA_5days_control_NA_85885
Matched control sample: GSM204605: LIVER_vehicle_NA_.25days_control_NA_85890
Matched control sample: GSM204628: LIVER_vehicle_NA_.25days_control_NA_85892
Matched control sample: GSM204710: LIVER_vehicle_NA_1days_control_NA_85897
Matched control sample: GSM204646: LIVER_vehicle_NA_1days_control_NA_85899
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BROMFENAC, 5mg/kg, 1 days


title: LIVER_PROMAZINE_100mg/kg_.25days_exp4721_rep2_80480

description:
HybID: 80480
treated sample for experiment (RepID) 4721
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223666: LIVER_PROMAZINE_100mg/kg_.25days_exp4721_rep3_80479
Replicate experimental sample: GSM223664: LIVER_PROMAZINE_100mg/kg_.25days_exp4721_rep1_80481
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PROMAZINE, 100mg/kg, .25 days

value: .25 days


title: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep1_81349

description:
HybID: 81349
treated sample for experiment (RepID) 4931
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223609: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep2_81348
Replicate experimental sample: GSM223610: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep3_81350
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PREDNISOLONE, 184mg/kg, 3 days

value: PREDNISOLONE

value: 184 mg/kg

value: WATER

value: 3 days


title: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep3_83497

description:
HybID: 83497
treated sample for experiment (RepID) 5448
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220962: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep2_83496
Replicate experimental sample: GSM220961: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep1_83498
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BISPHENOL A, 150mg/kg, 5 days

value: BISPHENOL A

value: 150 mg/kg

value: SUBCUTANEOUS

value: DAILY

value: 5 days


title: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep1_85588

description:
HybID: 85588
treated sample for experiment (RepID) 6040
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221006: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep2_85587
Replicate experimental sample: GSM221007: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep3_85589
Matched control sample: GSM204808: LIVER_vehicle_NA_5days_control_NA_85526
Matched control sample: GSM204874: LIVER_vehicle_NA_5days_control_NA_85536
Matched control sample: GSM204676: LIVER_vehicle_NA_1days_control_NA_85576
Matched control sample: GSM204767: LIVER_vehicle_NA_3days_control_NA_85579
Matched control sample: GSM204829: LIVER_vehicle_NA_5days_control_NA_85582
Matched control sample: GSM204702: LIVER_vehicle_NA_1days_control_NA_85602
Matched control sample: GSM204653: LIVER_vehicle_NA_1days_control_NA_85604
Matched control sample: GSM204749: LIVER_vehicle_NA_3days_control_NA_85605
Matched control sample: GSM204788: LIVER_vehicle_NA_3days_control_NA_85607
Matched control sample: GSM204841: LIVER_vehicle_NA_5days_control_NA_85609
Matched control sample: GSM204668: LIVER_vehicle_NA_1days_control_NA_85835
Matched control sample: GSM204709: LIVER_vehicle_NA_1days_control_NA_85837
Matched control sample: GSM204734: LIVER_vehicle_NA_3days_control_NA_85839
Matched control sample: GSM204822: LIVER_vehicle_NA_5days_control_NA_85841
Matched control sample: GSM204864: LIVER_vehicle_NA_5days_control_NA_85843
Matched control sample: GSM204848: LIVER_vehicle_NA_5days_control_NA_85885
Matched control sample: GSM204605: LIVER_vehicle_NA_.25days_control_NA_85890
Matched control sample: GSM204628: LIVER_vehicle_NA_.25days_control_NA_85892
Matched control sample: GSM204710: LIVER_vehicle_NA_1days_control_NA_85897
Matched control sample: GSM204646: LIVER_vehicle_NA_1days_control_NA_85899
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BROMFENAC, 5mg/kg, 3 days

value: 6 to 8 weeks

value: male

value: LIVER


title: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep2_85587

description:
HybID: 85587
treated sample for experiment (RepID) 6040
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221005: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep1_85588
Replicate experimental sample: GSM221007: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep3_85589
Matched control sample: GSM204808: LIVER_vehicle_NA_5days_control_NA_85526
Matched control sample: GSM204874: LIVER_vehicle_NA_5days_control_NA_85536
Matched control sample: GSM204676: LIVER_vehicle_NA_1days_control_NA_85576
Matched control sample: GSM204767: LIVER_vehicle_NA_3days_control_NA_85579
Matched control sample: GSM204829: LIVER_vehicle_NA_5days_control_NA_85582
Matched control sample: GSM204702: LIVER_vehicle_NA_1days_control_NA_85602
Matched control sample: GSM204653: LIVER_vehicle_NA_1days_control_NA_85604
Matched control sample: GSM204749: LIVER_vehicle_NA_3days_control_NA_85605
Matched control sample: GSM204788: LIVER_vehicle_NA_3days_control_NA_85607
Matched control sample: GSM204841: LIVER_vehicle_NA_5days_control_NA_85609
Matched control sample: GSM204668: LIVER_vehicle_NA_1days_control_NA_85835
Matched control sample: GSM204709: LIVER_vehicle_NA_1days_control_NA_85837
Matched control sample: GSM204734: LIVER_vehicle_NA_3days_control_NA_85839
Matched control sample: GSM204822: LIVER_vehicle_NA_5days_control_NA_85841
Matched control sample: GSM204864: LIVER_vehicle_NA_5days_control_NA_85843
Matched control sample: GSM204848: LIVER_vehicle_NA_5days_control_NA_85885
Matched control sample: GSM204605: LIVER_vehicle_NA_.25days_control_NA_85890
Matched control sample: GSM204628: LIVER_vehicle_NA_.25days_control_NA_85892
Matched control sample: GSM204710: LIVER_vehicle_NA_1days_control_NA_85897
Matched control sample: GSM204646: LIVER_vehicle_NA_1days_control_NA_85899
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: ORAL GAVAGE


title: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep2_81348

description:
HybID: 81348
treated sample for experiment (RepID) 4931
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223608: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep1_81349
Replicate experimental sample: GSM223610: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep3_81350
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_BROMFENAC_5mg/kg_5days_exp6044_rep1_85591

description:
HybID: 85591
treated sample for experiment (RepID) 6044
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221009: LIVER_BROMFENAC_5mg/kg_5days_exp6044_rep2_85590
Replicate experimental sample: GSM221010: LIVER_BROMFENAC_5mg/kg_5days_exp6044_rep3_85592
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: BROMFENAC


title: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep3_85584

description:
HybID: 85584
treated sample for experiment (RepID) 6036
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221003: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep2_85585
Replicate experimental sample: GSM221002: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep1_85586
Matched control sample: GSM204808: LIVER_vehicle_NA_5days_control_NA_85526
Matched control sample: GSM204874: LIVER_vehicle_NA_5days_control_NA_85536
Matched control sample: GSM204676: LIVER_vehicle_NA_1days_control_NA_85576
Matched control sample: GSM204767: LIVER_vehicle_NA_3days_control_NA_85579
Matched control sample: GSM204829: LIVER_vehicle_NA_5days_control_NA_85582
Matched control sample: GSM204702: LIVER_vehicle_NA_1days_control_NA_85602
Matched control sample: GSM204653: LIVER_vehicle_NA_1days_control_NA_85604
Matched control sample: GSM204749: LIVER_vehicle_NA_3days_control_NA_85605
Matched control sample: GSM204788: LIVER_vehicle_NA_3days_control_NA_85607
Matched control sample: GSM204841: LIVER_vehicle_NA_5days_control_NA_85609
Matched control sample: GSM204668: LIVER_vehicle_NA_1days_control_NA_85835
Matched control sample: GSM204709: LIVER_vehicle_NA_1days_control_NA_85837
Matched control sample: GSM204734: LIVER_vehicle_NA_3days_control_NA_85839
Matched control sample: GSM204822: LIVER_vehicle_NA_5days_control_NA_85841
Matched control sample: GSM204864: LIVER_vehicle_NA_5days_control_NA_85843
Matched control sample: GSM204848: LIVER_vehicle_NA_5days_control_NA_85885
Matched control sample: GSM204605: LIVER_vehicle_NA_.25days_control_NA_85890
Matched control sample: GSM204628: LIVER_vehicle_NA_.25days_control_NA_85892
Matched control sample: GSM204710: LIVER_vehicle_NA_1days_control_NA_85897
Matched control sample: GSM204646: LIVER_vehicle_NA_1days_control_NA_85899
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 5 mg/kg

value: 1 days


title: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep1_85586

description:
HybID: 85586
treated sample for experiment (RepID) 6036
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221004: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep3_85584
Replicate experimental sample: GSM221003: LIVER_BROMFENAC_5mg/kg_1days_exp6036_rep2_85585
Matched control sample: GSM204808: LIVER_vehicle_NA_5days_control_NA_85526
Matched control sample: GSM204874: LIVER_vehicle_NA_5days_control_NA_85536
Matched control sample: GSM204676: LIVER_vehicle_NA_1days_control_NA_85576
Matched control sample: GSM204767: LIVER_vehicle_NA_3days_control_NA_85579
Matched control sample: GSM204829: LIVER_vehicle_NA_5days_control_NA_85582
Matched control sample: GSM204702: LIVER_vehicle_NA_1days_control_NA_85602
Matched control sample: GSM204653: LIVER_vehicle_NA_1days_control_NA_85604
Matched control sample: GSM204749: LIVER_vehicle_NA_3days_control_NA_85605
Matched control sample: GSM204788: LIVER_vehicle_NA_3days_control_NA_85607
Matched control sample: GSM204841: LIVER_vehicle_NA_5days_control_NA_85609
Matched control sample: GSM204668: LIVER_vehicle_NA_1days_control_NA_85835
Matched control sample: GSM204709: LIVER_vehicle_NA_1days_control_NA_85837
Matched control sample: GSM204734: LIVER_vehicle_NA_3days_control_NA_85839
Matched control sample: GSM204822: LIVER_vehicle_NA_5days_control_NA_85841
Matched control sample: GSM204864: LIVER_vehicle_NA_5days_control_NA_85843
Matched control sample: GSM204848: LIVER_vehicle_NA_5days_control_NA_85885
Matched control sample: GSM204605: LIVER_vehicle_NA_.25days_control_NA_85890
Matched control sample: GSM204628: LIVER_vehicle_NA_.25days_control_NA_85892
Matched control sample: GSM204710: LIVER_vehicle_NA_1days_control_NA_85897
Matched control sample: GSM204646: LIVER_vehicle_NA_1days_control_NA_85899
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CMC


title: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep2_83496

description:
HybID: 83496
treated sample for experiment (RepID) 5448
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220963: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep3_83497
Replicate experimental sample: GSM220961: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep1_83498
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CORN OIL


title: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep3_81350

description:
HybID: 81350
treated sample for experiment (RepID) 4931
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223609: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep2_81348
Replicate experimental sample: GSM223608: LIVER_PREDNISOLONE_184mg/kg_3days_exp4931_rep1_81349
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: PREDNISOLONE

value: 184 mg/kg


title: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep3_81346

description:
HybID: 81346
treated sample for experiment (RepID) 4938
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223606: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep2_81345
Replicate experimental sample: GSM223605: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep1_81347
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PREDNISOLONE, 184mg/kg, 1 days

value: WATER


title: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep1_81347

description:
HybID: 81347
treated sample for experiment (RepID) 4938
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223606: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep2_81345
Replicate experimental sample: GSM223607: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep3_81346
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep1_83498

description:
HybID: 83498
treated sample for experiment (RepID) 5448
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220962: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep2_83496
Replicate experimental sample: GSM220963: LIVER_BISPHENOL_A_150mg/kg_5days_exp5448_rep3_83497
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: BISPHENOL A


title: LIVER_PRAVASTATIN_1200mg/kg_1days_exp5050_rep3_82031

description:
HybID: 82031
treated sample for experiment (RepID) 5050
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223594: LIVER_PRAVASTATIN_1200mg/kg_1days_exp5050_rep1_82030
Replicate experimental sample: GSM223595: LIVER_PRAVASTATIN_1200mg/kg_1days_exp5050_rep2_82864
Matched control sample: GSM204715: LIVER_vehicle_NA_1days_control_NA_81877
Matched control sample: GSM204638: LIVER_vehicle_NA_1days_control_NA_81878
Matched control sample: GSM204690: LIVER_vehicle_NA_1days_control_NA_81879
Matched control sample: GSM204730: LIVER_vehicle_NA_3days_control_NA_81880
Matched control sample: GSM204790: LIVER_vehicle_NA_3days_control_NA_81881
Matched control sample: GSM204772: LIVER_vehicle_NA_3days_control_NA_81882
Matched control sample: GSM204856: LIVER_vehicle_NA_5days_control_NA_81883
Matched control sample: GSM204832: LIVER_vehicle_NA_5days_control_NA_81884
Matched control sample: GSM204870: LIVER_vehicle_NA_5days_control_NA_81885
Matched control sample: GSM204631: LIVER_vehicle_NA_.25days_control_NA_81955
Matched control sample: GSM204624: LIVER_vehicle_NA_.25days_control_NA_81956
Matched control sample: GSM204597: LIVER_vehicle_NA_.25days_control_NA_81957
Matched control sample: GSM204652: LIVER_vehicle_NA_1days_control_NA_82304
Matched control sample: GSM204716: LIVER_vehicle_NA_1days_control_NA_82305
Matched control sample: GSM204699: LIVER_vehicle_NA_1days_control_NA_82306
Matched control sample: GSM204792: LIVER_vehicle_NA_3days_control_NA_82307
Matched control sample: GSM204779: LIVER_vehicle_NA_3days_control_NA_82308
Matched control sample: GSM204855: LIVER_vehicle_NA_5days_control_NA_82310
Matched control sample: GSM204869: LIVER_vehicle_NA_5days_control_NA_82311
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PRAVASTATIN, 1200mg/kg, 1 days

value: PRAVASTATIN


title: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep2_81345

description:
HybID: 81345
treated sample for experiment (RepID) 4938
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223607: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep3_81346
Replicate experimental sample: GSM223605: LIVER_PREDNISOLONE_184mg/kg_1days_exp4938_rep1_81347
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep3_86219

description:
HybID: 86219
treated sample for experiment (RepID) 6221
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220920: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep1_86217
Replicate experimental sample: GSM220921: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep2_86218
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BETAMETHASONE, 79mg/kg, 5 days

value: BETAMETHASONE

value: 79 mg/kg

value: SUBCUTANEOUS


title: LIVER_PRAVASTATIN_1200mg/kg_1days_exp5050_rep1_82030

description:
HybID: 82030
treated sample for experiment (RepID) 5050
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223596: LIVER_PRAVASTATIN_1200mg/kg_1days_exp5050_rep3_82031
Replicate experimental sample: GSM223595: LIVER_PRAVASTATIN_1200mg/kg_1days_exp5050_rep2_82864
Matched control sample: GSM204715: LIVER_vehicle_NA_1days_control_NA_81877
Matched control sample: GSM204638: LIVER_vehicle_NA_1days_control_NA_81878
Matched control sample: GSM204690: LIVER_vehicle_NA_1days_control_NA_81879
Matched control sample: GSM204730: LIVER_vehicle_NA_3days_control_NA_81880
Matched control sample: GSM204790: LIVER_vehicle_NA_3days_control_NA_81881
Matched control sample: GSM204772: LIVER_vehicle_NA_3days_control_NA_81882
Matched control sample: GSM204856: LIVER_vehicle_NA_5days_control_NA_81883
Matched control sample: GSM204832: LIVER_vehicle_NA_5days_control_NA_81884
Matched control sample: GSM204870: LIVER_vehicle_NA_5days_control_NA_81885
Matched control sample: GSM204631: LIVER_vehicle_NA_.25days_control_NA_81955
Matched control sample: GSM204624: LIVER_vehicle_NA_.25days_control_NA_81956
Matched control sample: GSM204597: LIVER_vehicle_NA_.25days_control_NA_81957
Matched control sample: GSM204652: LIVER_vehicle_NA_1days_control_NA_82304
Matched control sample: GSM204716: LIVER_vehicle_NA_1days_control_NA_82305
Matched control sample: GSM204699: LIVER_vehicle_NA_1days_control_NA_82306
Matched control sample: GSM204792: LIVER_vehicle_NA_3days_control_NA_82307
Matched control sample: GSM204779: LIVER_vehicle_NA_3days_control_NA_82308
Matched control sample: GSM204855: LIVER_vehicle_NA_5days_control_NA_82310
Matched control sample: GSM204869: LIVER_vehicle_NA_5days_control_NA_82311
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 6 to 8 weeks

value: DAILY


title: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep2_86218

description:
HybID: 86218
treated sample for experiment (RepID) 6221
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220920: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep1_86217
Replicate experimental sample: GSM220922: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep3_86219
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: male

value: LIVER

value: 5 days


title: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep3_85589

description:
HybID: 85589
treated sample for experiment (RepID) 6040
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221006: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep2_85587
Replicate experimental sample: GSM221005: LIVER_BROMFENAC_5mg/kg_3days_exp6040_rep1_85588
Matched control sample: GSM204808: LIVER_vehicle_NA_5days_control_NA_85526
Matched control sample: GSM204874: LIVER_vehicle_NA_5days_control_NA_85536
Matched control sample: GSM204676: LIVER_vehicle_NA_1days_control_NA_85576
Matched control sample: GSM204767: LIVER_vehicle_NA_3days_control_NA_85579
Matched control sample: GSM204829: LIVER_vehicle_NA_5days_control_NA_85582
Matched control sample: GSM204702: LIVER_vehicle_NA_1days_control_NA_85602
Matched control sample: GSM204653: LIVER_vehicle_NA_1days_control_NA_85604
Matched control sample: GSM204749: LIVER_vehicle_NA_3days_control_NA_85605
Matched control sample: GSM204788: LIVER_vehicle_NA_3days_control_NA_85607
Matched control sample: GSM204841: LIVER_vehicle_NA_5days_control_NA_85609
Matched control sample: GSM204668: LIVER_vehicle_NA_1days_control_NA_85835
Matched control sample: GSM204709: LIVER_vehicle_NA_1days_control_NA_85837
Matched control sample: GSM204734: LIVER_vehicle_NA_3days_control_NA_85839
Matched control sample: GSM204822: LIVER_vehicle_NA_5days_control_NA_85841
Matched control sample: GSM204864: LIVER_vehicle_NA_5days_control_NA_85843
Matched control sample: GSM204848: LIVER_vehicle_NA_5days_control_NA_85885
Matched control sample: GSM204605: LIVER_vehicle_NA_.25days_control_NA_85890
Matched control sample: GSM204628: LIVER_vehicle_NA_.25days_control_NA_85892
Matched control sample: GSM204710: LIVER_vehicle_NA_1days_control_NA_85897
Matched control sample: GSM204646: LIVER_vehicle_NA_1days_control_NA_85899
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: BROMFENAC

value: 5 mg/kg

value: ORAL GAVAGE

value: 3 days


title: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep1_86217

description:
HybID: 86217
treated sample for experiment (RepID) 6221
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220921: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep2_86218
Replicate experimental sample: GSM220922: LIVER_BETAMETHASONE_79mg/kg_5days_exp6221_rep3_86219
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CORN OIL


title: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep3_86215

description:
HybID: 86215
treated sample for experiment (RepID) 6212
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220918: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep2_86214
Replicate experimental sample: GSM220917: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep1_86216
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BETAMETHASONE, 79mg/kg, 3 days


title: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep1_86216

description:
HybID: 86216
treated sample for experiment (RepID) 6212
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220918: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep2_86214
Replicate experimental sample: GSM220919: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep3_86215
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep3_19225

description:
HybID: 19225
treated sample for experiment (RepID) 4334
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223564: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep1_19226
Replicate experimental sample: GSM223565: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep2_81557
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PIOGLITAZONE, 3mg/kg, .25 days

value: PIOGLITAZONE

value: 3 mg/kg

value: .25 days


title: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep1_19227

description:
HybID: 19227
treated sample for experiment (RepID) 4363
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223569: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep3_19228
Replicate experimental sample: GSM223568: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep2_19229
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PIOGLITAZONE, 3mg/kg, 1 days

value: 1 days


title: LIVER_BETAMETHASONE_79mg/kg_1days_exp6208_rep3_86213

description:
HybID: 86213
treated sample for experiment (RepID) 6208
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220914: LIVER_BETAMETHASONE_79mg/kg_1days_exp6208_rep1_86211
Replicate experimental sample: GSM220915: LIVER_BETAMETHASONE_79mg/kg_1days_exp6208_rep2_86212
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BETAMETHASONE, 79mg/kg, 1 days

value: BETAMETHASONE


title: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep2_86214

description:
HybID: 86214
treated sample for experiment (RepID) 6212
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220919: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep3_86215
Replicate experimental sample: GSM220917: LIVER_BETAMETHASONE_79mg/kg_3days_exp6212_rep1_86216
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 79 mg/kg


title: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep2_81557

description:
HybID: 81557
treated sample for experiment (RepID) 4334
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223566: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep3_19225
Replicate experimental sample: GSM223564: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep1_19226
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep1_19226

description:
HybID: 19226
treated sample for experiment (RepID) 4334
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223566: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep3_19225
Replicate experimental sample: GSM223565: LIVER_PIOGLITAZONE_3mg/kg_.25days_exp4334_rep2_81557
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep2_19229

description:
HybID: 19229
treated sample for experiment (RepID) 4363
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223567: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep1_19227
Replicate experimental sample: GSM223569: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep3_19228
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_91days_exp6310_rep2_86681

description:
HybID: 86681
treated sample for experiment (RepID) 6310
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220913: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_91days_exp6310_rep3_86680
Replicate experimental sample: GSM220911: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_91days_exp6310_rep1_86682
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BETA-NAPHTHOFLAVONE, 80mg/kg, 91 days

value: BETA-NAPHTHOFLAVONE

value: 80 mg/kg

value: CMC

value: 91 days


title: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep3_19349

description:
HybID: 19349
treated sample for experiment (RepID) 4399
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223562: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep2_19969
Replicate experimental sample: GSM223561: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep1_81558
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PIOGLITAZONE, 300mg/kg, 3 days

value: 6 to 8 weeks

value: male

value: LIVER

value: 300 mg/kg

value: DAILY


title: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep2_19969

description:
HybID: 19969
treated sample for experiment (RepID) 4399
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223563: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep3_19349
Replicate experimental sample: GSM223561: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep1_81558
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: ORAL GAVAGE

value: 3 days


title: LIVER_BETAMETHASONE_79mg/kg_1days_exp6208_rep1_86211

description:
HybID: 86211
treated sample for experiment (RepID) 6208
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220915: LIVER_BETAMETHASONE_79mg/kg_1days_exp6208_rep2_86212
Replicate experimental sample: GSM220916: LIVER_BETAMETHASONE_79mg/kg_1days_exp6208_rep3_86213
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CORN OIL

value: SUBCUTANEOUS


title: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_91days_exp6310_rep1_86682

description:
HybID: 86682
treated sample for experiment (RepID) 6310
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220913: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_91days_exp6310_rep3_86680
Replicate experimental sample: GSM220912: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_91days_exp6310_rep2_86681
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep3_19228

description:
HybID: 19228
treated sample for experiment (RepID) 4363
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223567: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep1_19227
Replicate experimental sample: GSM223568: LIVER_PIOGLITAZONE_3mg/kg_1days_exp4363_rep2_19229
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: PIOGLITAZONE

value: 3 mg/kg


title: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_5days_exp6316_rep1_86676

description:
HybID: 86676
treated sample for experiment (RepID) 6316
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220910: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_5days_exp6316_rep3_86674
Replicate experimental sample: GSM220909: LIVER_BETA-NAPHTHOFLAVONE_80mg/kg_5days_exp6316_rep2_86675
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BETA-NAPHTHOFLAVONE, 80mg/kg, 5 days

value: 5 days


title: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep1_81558

description:
HybID: 81558
treated sample for experiment (RepID) 4399
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223563: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep3_19349
Replicate experimental sample: GSM223562: LIVER_PIOGLITAZONE_300mg/kg_3days_exp4399_rep2_19969
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf