title: LIVER_CARMUSTINE_16mg/kg_.25days_exp3074_rep2_14686

description:
HybID: 14686
treated sample for experiment (RepID) 3074
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221122: LIVER_CARMUSTINE_16mg/kg_.25days_exp3074_rep1_13816
Replicate experimental sample: GSM221124: LIVER_CARMUSTINE_16mg/kg_.25days_exp3074_rep3_15485
Matched control sample: GSM204826: LIVER_vehicle_NA_5days_control_NA_14342
Matched control sample: GSM204616: LIVER_vehicle_NA_.25days_control_NA_14379
Matched control sample: GSM204802: LIVER_vehicle_NA_5days_control_NA_14389
Matched control sample: GSM204609: LIVER_vehicle_NA_.25days_control_NA_14439
Matched control sample: GSM204675: LIVER_vehicle_NA_1days_control_NA_14446
Matched control sample: GSM204745: LIVER_vehicle_NA_3days_control_NA_14449
Matched control sample: GSM204811: LIVER_vehicle_NA_5days_control_NA_14455
Matched control sample: GSM204738: LIVER_vehicle_NA_3days_control_NA_14705
Matched control sample: GSM204838: LIVER_vehicle_NA_5days_control_NA_14709
Matched control sample: GSM204750: LIVER_vehicle_NA_3days_control_NA_14804
Matched control sample: GSM204630: LIVER_vehicle_NA_.25days_control_NA_14819
Matched control sample: GSM204705: LIVER_vehicle_NA_1days_control_NA_14821
Matched control sample: GSM204834: LIVER_vehicle_NA_5days_control_NA_14823
Matched control sample: GSM204688: LIVER_vehicle_NA_1days_control_NA_14843
Matched control sample: GSM204757: LIVER_vehicle_NA_3days_control_NA_14940
Matched control sample: GSM204610: LIVER_vehicle_NA_.25days_control_NA_15242
Matched control sample: GSM204687: LIVER_vehicle_NA_1days_control_NA_15284
Matched control sample: GSM204619: LIVER_vehicle_NA_.25days_control_NA_15396
Matched control sample: GSM204780: LIVER_vehicle_NA_3days_control_NA_15420
Matched control sample: GSM204598: LIVER_vehicle_NA_.25days_control_NA_17885
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARMUSTINE_16mg/kg_.25days_exp3074_rep3_15485

status: Public on Mar 28 2008

type: RNA

city: Mountain View

first: Jeremy

last: Gollub

state: CA

address: 325 E. Middlefield Rd.

country: USA

institute: Iconix Biosciences

description:
HybID: 15485
treated sample for experiment (RepID) 3074
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221122: LIVER_CARMUSTINE_16mg/kg_.25days_exp3074_rep1_13816
Replicate experimental sample: GSM221123: LIVER_CARMUSTINE_16mg/kg_.25days_exp3074_rep2_14686
Matched control sample: GSM204826: LIVER_vehicle_NA_5days_control_NA_14342
Matched control sample: GSM204616: LIVER_vehicle_NA_.25days_control_NA_14379
Matched control sample: GSM204802: LIVER_vehicle_NA_5days_control_NA_14389
Matched control sample: GSM204609: LIVER_vehicle_NA_.25days_control_NA_14439
Matched control sample: GSM204675: LIVER_vehicle_NA_1days_control_NA_14446
Matched control sample: GSM204745: LIVER_vehicle_NA_3days_control_NA_14449
Matched control sample: GSM204811: LIVER_vehicle_NA_5days_control_NA_14455
Matched control sample: GSM204738: LIVER_vehicle_NA_3days_control_NA_14705
Matched control sample: GSM204838: LIVER_vehicle_NA_5days_control_NA_14709
Matched control sample: GSM204750: LIVER_vehicle_NA_3days_control_NA_14804
Matched control sample: GSM204630: LIVER_vehicle_NA_.25days_control_NA_14819
Matched control sample: GSM204705: LIVER_vehicle_NA_1days_control_NA_14821
Matched control sample: GSM204834: LIVER_vehicle_NA_5days_control_NA_14823
Matched control sample: GSM204688: LIVER_vehicle_NA_1days_control_NA_14843
Matched control sample: GSM204757: LIVER_vehicle_NA_3days_control_NA_14940
Matched control sample: GSM204610: LIVER_vehicle_NA_.25days_control_NA_15242
Matched control sample: GSM204687: LIVER_vehicle_NA_1days_control_NA_15284
Matched control sample: GSM204619: LIVER_vehicle_NA_.25days_control_NA_15396
Matched control sample: GSM204780: LIVER_vehicle_NA_3days_control_NA_15420
Matched control sample: GSM204598: LIVER_vehicle_NA_.25days_control_NA_17885
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

hyb_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. 12.5 ug of cRNA sample was fragmented in 40 mM Tris-acetate (TrisOAc) pH7.9, 100 mM KOAc and 31.5 mM MgOAc at 94oC for 20 min. This typically resulted in a fragmented cRNA with a size range between 100 to 200 bases. 10 ug of the fragmented cRNA was used for hybridization of each Rat-Uniset I (RU1) Expression BioArray (Amersham Biosciences, Piscataway, NJ) in a volume of 260 ul, containing 78 ul of CodeLink Hyb buffer component A and 130 ul of CodeLink Hyb buffer component B (Amersham Biosciences, Piscataway, NJ). The hybridization solution was denatured at 90oC for 5 min then chilled on ice. The sample was vortexed at maximum speed for 5 sec and centrifuged at maximum speed for 5 min before 250 ul of the solution was injected into the inlet port of the flex-hybridization chamber, and placed in a CodeLink 12-slide shaker tray. The hybridization ports were sealed with 1 cm sealing strips (Amersham Biosciences, Piscataway, NJ), and the shaker tray(s) containing the slides was loaded into a New Brunswick Innova 4080 shaking incubator, with the hybridization chambers facing up. Slides were incubated for 20 hr at 37oC, while shaking at 300 rpm. The 12-slide shaker tray was removed from the shaker, and the hybridization chamber removed from each slide. Each slide was placed into the BioArray Rack of the Parallel Processing Tool (Amersham Biosciences, Piscataway, NJ) and incubated with 0.75x TNT (0.075 M Tris-HCl, pH7.6, 0.1125 M NaCl, 0.0375 % Tween-20) at 46oC for 1hr. The BioArray Rack was moved from the TNT containing reservoir to the small reagent reservoir containing 1:500 dilution of streptavidin-Alexa 647 (Molecular Probes, Eugene, OR). The signal was developed for 30 min at room temperature, before the reaction was stopped and slides were washed four times for 5 min each in TNT buffer (0.1 M Tris-HCl, pH7.6, 0.15 M NaCl, 0.05% Tween-20) using a large reagent reservoir. The slides were rinsed in ddH2O with 0.05% Tween-20 twice for 5 sec each before they were dried by centrifugation with a Qiagen Sigma 4-15C centrifuge (Valencia, CA) using a swinging bucket rotor (2x96) for exactly 3 min at 2000rpm (acceleration at position 9 and deceleration at position 9). The dried slides were stored in light protective slide boxes at room temperature prior to scanning.

scan_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The Axon GenePix Scanner (Axon Instrument, Union City, CA) was calibrated using the Calibration Slide supplied by Axon Instrument with GenePix 4.0 at 635 nm using the Calibration System. After calibration of the scanner, all processed slides were scanned with the laser set to 635 nm, the photomultiplier tube (PMT) voltage to 600 and the scan resolution to 10 microns. For consistency all slides were scanned the same day of color development, within an hour after dry spinning them and the data was analyzed using the CodeLink Expression Analysis Software version 2.2.25 (Amersham Biosciences, Piscataway, NJ).

data_processing: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44, supplemental methods.  Prior to statistical computation, the spot reading data was normalized. For this purpose a new nonlinear normalization procedure, similar to the centralization approach reported in the literature (Zien et al., 2001) was developed for the CodeLink array platform. The normalization procedure uses proprietary algorithm that assumes that in general, for an array with many probes, the majority of the signal represents genes that have unchanged expressions compared to controls, with the extreme values representing the true biology of the process and not some artifact due to measurement noise. The algorithm does not make the assumption that the true mRNA abundance being measured is linearly proportional to the spot reading signal or any assumption about the error distribution of such signals or their differential. Rather, the assumption of unchanged signals representing the bulk of the signal measurements is used to center a nonlinear curve fit to a reference template. This reference template is constructed for a large set of time matched, same tissue and same vehicle, control arrays, computing a median log signal for each probe. The replicate size of this set is adequate to ensure very small random error in the ensemble signal level for each reference probe. The curve fit corrects for some array processing problems, such as partial signal saturation, and improves the overall quality of the data compared to simple linear normalization methods. Essentially the curve tracks the mode of the signal distribution for sets of genes against the expected value for that set.

label: biotin

molecule: polyA RNA

organism: Rattus norvegicus

source_name: LIVER, CARMUSTINE, 16mg/kg, .25 days

label_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The methods used for cRNA preparation (cDNA synthesis, cRNA preparation, and cRNA purification) are essentially as described in the CodeLink™ manual v2.1 as supplied by Amersham Biosciences (Piscataway, NJ) using the Qiagen BioRobot 9604 (Valencia, CA). cDNA synthesis, cRNA preparation, and cRNA purification were completely processed in a 96-well format using the automated Qiagen BioRobot 9604 procedure. 0.6 – 20 ìg of enriched RNA from different tissue sources were added to a reaction mixture in a final volume of 12 ìl, containing bacterial control RNA (1.5pg FixA, 5pgYjeK, 5pg AraB, 15pg EntF, 50pg FixB, 150pg HisB, 500pg LeuB, 1500pg gnd) and 1.0 ìl of 100 pmol ìl-1 T7-(dT)24 oligonucleotide primer (Proligo, Boulder, CO). The T7-(dT)24 oligonucleotide primer used, is an HPLC purified 63-mer with the sequence : 5'-GGCCAGTGAATTGTAATACGACTCACTATAGGGAGGCGGTTTTTTTTTTTTTTTTTTTTTTTT-3'. The mixture was incubated for 10 min at 70oC and chilled on ice. On ice, 4 ul of 5x first-strand buffer, 2 ul 0.1 M DTT, 1 ul of 10 mM dNTP mix and 1 ul Superscript™II RNaseH-reverse transcriptase (200 U/ul) were added to the mixture to make a final volume of 20 ul. The mixture was incubated for 1 hr at 37oC. Second-strand cDNA was synthesized in a volume of 150 ul, containing 92 ul nuclease-free water, 30 ul of 5x second-strand buffer, 3 ul of 10 mM dNTP mix, 4 ul of Escherichia coli DNA polymerase I (10 U/ìl) and 1 ul of RNase H (2 U/ul) for 2 hr at 16oC. The cDNA was purified using a Qiagen QIAquick purification kit, and completely dried down using a Speed-Vac concentrator (45oC) for 2 hr. The dried product was resuspended in IVT reaction mix containing 3.0 ul of nuclease-free water, 4.0 ul 10x reaction buffer, 4.0 ul 75 mM ATP, 4.0 ul 75 mM GTP, 3.0 ul 75 mM CTP, 3.0 ul 75 mM UTP, 7.5 ul 10 mM Biotin 11-CTP, 7.5 ul 10 mM Biotin 11-UTP and 4.0 ul enzyme mix. The reaction mix was incubated for 14 hr at 37oC using an MJ Research 96-well PTC-200 Thermal Cycler (MJ Research, Waltham, MA), before the cRNA was purified using a Qiagen RNeasy® kit. The resulting cRNA yield was quantified using the 96-well ìQuan Universal Microplate Spectrophotometer Model MQX200 (BIO-TEK Instruments Inc., Winooski, VT) at a wavelength of 260 nm. Conformance of the cRNA sample to historical size distributions (the bulk of the cRNA product should be between 500 and 3,000 bases in size) was confirmed using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA). Samples not near the historical norm were reprocessed starting from tissue or RNA.

growth_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Sprague-Dawley (Crl:CD®(SD)|GS BR) rats (aged 6-8 weeks and weighing 200 - 260 g), were purchased from Charles River Laboratories (Wilmington, MA). They were housed in plastic cages for 1 week for acclimation to the laboratory environment of a ventilated room (temperature, 22oC ±3oC; humidity, 30 - 70%; light/dark cycle, 12 h d-1, 6:00am - 6:00pm) until use. Certified Rodent Diet #5002 (PMI Feeds Inc.) and chlorinated tap water was available ad libitum.

extract_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. Following sacrifice, 6 mm disposable biopsy punches (#REF 33-36 Miltex, Inc. Bethpage, NY) were used to obtain tissue samples of approximately 100 mg. Samples were placed in cryogenic tubes and snap frozen. Poly A(+)-RNA from tissue samples was isolated using the MagNA Pure LC robot (Roche, Basel, Switzerland) in combination with the MagNA Pure LC mRNA Isolation kit I and II (Roche, Basel, Switzerland) for cells (see supplemental methods section) and tissues, respectively. Tissue samples were completely homogenized directly from ~100 mg punches stored on dry ice prior to application of lysis buffer to a final concentration of 65 mg tissue per ml of buffer. After complete homogenization, using disposable Omni Tip Disposable Generator Probes (Omni Inc, Warrenton, VA) and before loading of the samples into the 32-well MagNA Pure plate, the samples were drawn up 5-6 times through a 20-gauge needle attached to a 3-ml syringe to ensure any tissue pieces or clumps were removed from the lysate prior to robotic processing. Tissue sample processing was performed in duplicate wells (loading 150 ul of homogenized sample to each well) of the MagNA Pure LC, which is programmed to extract mRNA using the oligo-dT selection method into a final elution volume of 100 ul. Poly A(+) RNA sample concentration was performed manually using a standard ethanol precipitation protocol in the presence of glycogen (50 ug/ml). After precipitation the final purified RNA sample was resuspended in 7 ìl DEPC-H2O and quantified using a Ribogreen high-range assay (Molecular Probes) on the Wallac Victor2 Fluorometer (Perkin-Elmer, Fremont, CA). Additionally, the integrity of each RNA sample was determined, by comparison to historical standards (no gross degradation should be visible as suggested by clear 18S and 28S peaks on top of a hump of complex RNA, with lower amounts of RNA below 18S than under and above the 18S peak), using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA) in combination with the RNA 6000 Nano Lab Chip kit (Agilent Technologies).

treatment_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Compounds were administered via the route of administration (ROA) that corresponds to that by which humans receive the drug. Compounds were typically administered orally (PO) (83%), intravenously (IV) (9.4%), subcutaneously (SC) (5.7%), or intraperitoneally (IP) (2%). If the compound is a toxicant or a biochemical standard, it was administered orally. For oral dosing, the vehicle choice largely depends on the solubility of the compound in water. Water-soluble compounds were administered in water. Insoluble compounds are administered in either corn oil or 0.5% carboxymethylcellulose (CMC) using the best literature recommendation as a guide. IV administered compounds were usually dissolved in saline and SC administered compounds in corn oil. The highest dose the rats receive is the Maximum Tolerated Dose (MTD). The dosing of animals was staggered based on intended harvest order to ensure that sacrifice occurred within 30 minutes of the recorded time point. Dosing frequency was as described in Sample_characteristics for the particular treatment.

tag: Sprague-Dawley

tag: age

value: 6 to 8 weeks

tag: sex

value: male

tag: tissue

value: LIVER

tag: treatment compound

value: CARMUSTINE

tag: dose

value: 16 mg/kg

tag: solvent

value: CORN OIL

tag: administration route

value: ORAL GAVAGE

tag: frequency of dosing

value: DAILY

tag: treatment duration

value: .25 days

tag: experiment date


title: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep3_15843

description:
HybID: 15843
treated sample for experiment (RepID) 3549
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221119: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep1_15841
Replicate experimental sample: GSM221120: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep2_15842
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 6mg/kg, 5 days

value: CARBOPLATIN

value: 6 mg/kg

value: SALINE

value: INTRAVENOUS

value: 5 days


title: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep3_80222

description:
HybID: 80222
treated sample for experiment (RepID) 4644
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221848: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep2_80223
Replicate experimental sample: GSM221847: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep1_80224
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, EPALRESTAT, 2500mg/kg, 3 days

value: EPALRESTAT

value: CMC

value: 3 days


title: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep2_80279

description:
HybID: 80279
treated sample for experiment (RepID) 4666
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221844: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep1_80277
Replicate experimental sample: GSM221846: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep3_80278
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, EPALRESTAT, 2500mg/kg, 1 days

value: 6 to 8 weeks

value: 1 days


title: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep1_80277

description:
HybID: 80277
treated sample for experiment (RepID) 4666
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221846: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep3_80278
Replicate experimental sample: GSM221845: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep2_80279
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: male

value: LIVER


title: LIVER_CARBOPLATIN_6mg/kg_3days_exp3521_rep2_15621

description:
HybID: 15621
treated sample for experiment (RepID) 3521
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221118: LIVER_CARBOPLATIN_6mg/kg_3days_exp3521_rep3_15619
Replicate experimental sample: GSM221116: LIVER_CARBOPLATIN_6mg/kg_3days_exp3521_rep1_17887
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 6mg/kg, 3 days


title: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep1_80224

description:
HybID: 80224
treated sample for experiment (RepID) 4644
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221849: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep3_80222
Replicate experimental sample: GSM221848: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep2_80223
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep3_15364

description:
HybID: 15364
treated sample for experiment (RepID) 3456
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221111: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep2_15363
Replicate experimental sample: GSM221110: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep1_15365
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 6mg/kg, .25 days


title: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep2_15842

description:
HybID: 15842
treated sample for experiment (RepID) 3549
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221119: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep1_15841
Replicate experimental sample: GSM221121: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep3_15843
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep2_15754

description:
HybID: 15754
treated sample for experiment (RepID) 3477
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221115: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep3_15461
Replicate experimental sample: GSM221113: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep1_15721
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 6mg/kg, 1 days


title: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep1_15721

description:
HybID: 15721
treated sample for experiment (RepID) 3477
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221115: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep3_15461
Replicate experimental sample: GSM221114: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep2_15754
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep1_81408

description:
HybID: 81408
treated sample for experiment (RepID) 4389
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221775: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep2_19552
Replicate experimental sample: GSM221776: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep3_81591
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DOXYCYCLINE, 14mg/kg, 1 days

value: DOXYCYCLINE

value: 14 mg/kg

value: WATER


title: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep3_15461

description:
HybID: 15461
treated sample for experiment (RepID) 3477
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221113: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep1_15721
Replicate experimental sample: GSM221114: LIVER_CARBOPLATIN_6mg/kg_1days_exp3477_rep2_15754
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: DAILY


title: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep2_80274

description:
HybID: 80274
treated sample for experiment (RepID) 4661
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221841: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep1_80275
Replicate experimental sample: GSM221843: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep3_80276
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, EPALRESTAT, 2500mg/kg, .25 days

value: ORAL GAVAGE

value: .25 days


title: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep2_15363

description:
HybID: 15363
treated sample for experiment (RepID) 3456
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221112: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep3_15364
Replicate experimental sample: GSM221110: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep1_15365
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CARBOPLATIN

value: 6 mg/kg


title: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep2_19552

description:
HybID: 19552
treated sample for experiment (RepID) 4389
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221774: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep1_81408
Replicate experimental sample: GSM221776: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep3_81591
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep1_80275

description:
HybID: 80275
treated sample for experiment (RepID) 4661
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221842: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep2_80274
Replicate experimental sample: GSM221843: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep3_80276
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep2_80223

description:
HybID: 80223
treated sample for experiment (RepID) 4644
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221849: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep3_80222
Replicate experimental sample: GSM221847: LIVER_EPALRESTAT_2500mg/kg_3days_exp4644_rep1_80224
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep3_80276

description:
HybID: 80276
treated sample for experiment (RepID) 4661
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221842: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep2_80274
Replicate experimental sample: GSM221841: LIVER_EPALRESTAT_2500mg/kg_.25days_exp4661_rep1_80275
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep1_15841

description:
HybID: 15841
treated sample for experiment (RepID) 3549
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221120: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep2_15842
Replicate experimental sample: GSM221121: LIVER_CARBOPLATIN_6mg/kg_5days_exp3549_rep3_15843
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: SALINE

value: INTRAVENOUS


title: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep2_81590

description:
HybID: 81590
treated sample for experiment (RepID) 4337
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221773: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep3_19139
Replicate experimental sample: GSM221771: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep1_81589
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DOXYCYCLINE, 14mg/kg, .25 days


title: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep3_81591

description:
HybID: 81591
treated sample for experiment (RepID) 4389
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221775: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep2_19552
Replicate experimental sample: GSM221774: LIVER_DOXYCYCLINE_14mg/kg_1days_exp4389_rep1_81408
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep3_19139

description:
HybID: 19139
treated sample for experiment (RepID) 4337
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221771: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep1_81589
Replicate experimental sample: GSM221772: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep2_81590
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep1_15365

description:
HybID: 15365
treated sample for experiment (RepID) 3456
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221111: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep2_15363
Replicate experimental sample: GSM221112: LIVER_CARBOPLATIN_6mg/kg_.25days_exp3456_rep3_15364
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep1_81589

description:
HybID: 81589
treated sample for experiment (RepID) 4337
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221773: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep3_19139
Replicate experimental sample: GSM221772: LIVER_DOXYCYCLINE_14mg/kg_.25days_exp4337_rep2_81590
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep1_15846

description:
HybID: 15846
treated sample for experiment (RepID) 3554
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221109: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep3_15844
Replicate experimental sample: GSM221108: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep2_15845
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 14mg/kg, 5 days

value: 5 days


title: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep3_80278

description:
HybID: 80278
treated sample for experiment (RepID) 4666
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221844: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep1_80277
Replicate experimental sample: GSM221845: LIVER_EPALRESTAT_2500mg/kg_1days_exp4666_rep2_80279
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: EPALRESTAT

value: CMC


title: LIVER_CARBOPLATIN_6mg/kg_3days_exp3521_rep3_15619

description:
HybID: 15619
treated sample for experiment (RepID) 3521
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221117: LIVER_CARBOPLATIN_6mg/kg_3days_exp3521_rep2_15621
Replicate experimental sample: GSM221116: LIVER_CARBOPLATIN_6mg/kg_3days_exp3521_rep1_17887
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 6 to 8 weeks

value: 3 days


title: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep3_15844

description:
HybID: 15844
treated sample for experiment (RepID) 3554
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221108: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep2_15845
Replicate experimental sample: GSM221107: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep1_15846
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: male


title: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep3_19187

description:
HybID: 19187
treated sample for experiment (RepID) 4375
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221768: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep1_19186
Replicate experimental sample: GSM221769: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep2_19188
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DOXYCYCLINE, 1000mg/kg, 3 days

value: LIVER


title: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep2_15845

description:
HybID: 15845
treated sample for experiment (RepID) 3554
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221109: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep3_15844
Replicate experimental sample: GSM221107: LIVER_CARBOPLATIN_14mg/kg_5days_exp3554_rep1_15846
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep3_15463

description:
HybID: 15463
treated sample for experiment (RepID) 3472
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221102: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep2_15464
Replicate experimental sample: GSM221101: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep1_15465
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 14mg/kg, 1 days

value: 1 days


title: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep3_15724

description:
HybID: 15724
treated sample for experiment (RepID) 3508
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221105: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep2_15622
Replicate experimental sample: GSM221104: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep1_15623
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 14mg/kg, 3 days

value: 14 mg/kg


title: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep3_19220

description:
HybID: 19220
treated sample for experiment (RepID) 4328
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221730: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep2_19219
Replicate experimental sample: GSM221729: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep1_19269
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DISULFIRAM, 500mg/kg, 3 days

value: DISULFIRAM

value: 500 mg/kg

value: WATER


title: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep2_81027

description:
HybID: 81027
treated sample for experiment (RepID) 4388
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221765: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep1_19257
Replicate experimental sample: GSM221767: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep3_81554
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DOXYCYCLINE, 1000mg/kg, 1 days

value: DOXYCYCLINE

value: ORAL GAVAGE

value: DAILY


title: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep1_15623

description:
HybID: 15623
treated sample for experiment (RepID) 3508
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221105: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep2_15622
Replicate experimental sample: GSM221106: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep3_15724
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CARBOPLATIN

value: SALINE


title: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep3_81598

description:
HybID: 81598
treated sample for experiment (RepID) 4336
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221727: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep2_19218
Replicate experimental sample: GSM221726: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep1_81597
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DISULFIRAM, 500mg/kg, 1 days


title: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep2_19218

description:
HybID: 19218
treated sample for experiment (RepID) 4336
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221726: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep1_81597
Replicate experimental sample: GSM221728: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep3_81598
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep1_81597

description:
HybID: 81597
treated sample for experiment (RepID) 4336
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221727: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep2_19218
Replicate experimental sample: GSM221728: LIVER_DISULFIRAM_500mg/kg_1days_exp4336_rep3_81598
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep2_15622

description:
HybID: 15622
treated sample for experiment (RepID) 3508
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221104: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep1_15623
Replicate experimental sample: GSM221106: LIVER_CARBOPLATIN_14mg/kg_3days_exp3508_rep3_15724
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: INTRAVENOUS


title: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep1_19269

description:
HybID: 19269
treated sample for experiment (RepID) 4328
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221730: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep2_19219
Replicate experimental sample: GSM221731: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep3_19220
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep1_15752

description:
HybID: 15752
treated sample for experiment (RepID) 3458
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221100: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep3_15366
Replicate experimental sample: GSM221099: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep2_15367
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 14mg/kg, .25 days

value: .25 days


title: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep1_19186

description:
HybID: 19186
treated sample for experiment (RepID) 4375
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221770: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep3_19187
Replicate experimental sample: GSM221769: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep2_19188
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep2_19219

description:
HybID: 19219
treated sample for experiment (RepID) 4328
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221731: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep3_19220
Replicate experimental sample: GSM221729: LIVER_DISULFIRAM_500mg/kg_3days_exp4328_rep1_19269
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep1_19257

description:
HybID: 19257
treated sample for experiment (RepID) 4388
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221766: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep2_81027
Replicate experimental sample: GSM221767: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep3_81554
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf