title: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep2_82934

description:
HybID: 82934
treated sample for experiment (RepID) 5300
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220335: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep3_82935
Replicate experimental sample: GSM220333: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep1_83154
Matched control sample: GSM204726: LIVER_vehicle_NA_3days_control_NA_82309
Matched control sample: GSM204830: LIVER_vehicle_NA_5days_control_NA_82312
Matched control sample: GSM204698: LIVER_vehicle_NA_1days_control_NA_82496
Matched control sample: GSM204643: LIVER_vehicle_NA_1days_control_NA_82497
Matched control sample: GSM204733: LIVER_vehicle_NA_3days_control_NA_82499
Matched control sample: GSM204794: LIVER_vehicle_NA_3days_control_NA_82500
Matched control sample: GSM204774: LIVER_vehicle_NA_3days_control_NA_82501
Matched control sample: GSM204717: LIVER_vehicle_NA_1days_control_NA_82848
Matched control sample: GSM204704: LIVER_vehicle_NA_1days_control_NA_82849
Matched control sample: GSM204678: LIVER_vehicle_NA_1days_control_NA_82850
Matched control sample: GSM204725: LIVER_vehicle_NA_3days_control_NA_82851
Matched control sample: GSM204776: LIVER_vehicle_NA_3days_control_NA_82852
Matched control sample: GSM204795: LIVER_vehicle_NA_3days_control_NA_82853
Matched control sample: GSM204837: LIVER_vehicle_NA_5days_control_NA_82855
Matched control sample: GSM204860: LIVER_vehicle_NA_5days_control_NA_82949
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 4-METHYLPYRAZOLE, 155mg/kg, 3 days


title: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep3_82935

status: Public on Mar 28 2008

type: RNA

city: Mountain View

first: Jeremy

last: Gollub

state: CA

address: 325 E. Middlefield Rd.

country: USA

institute: Iconix Biosciences

description:
HybID: 82935
treated sample for experiment (RepID) 5300
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220334: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep2_82934
Replicate experimental sample: GSM220333: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep1_83154
Matched control sample: GSM204726: LIVER_vehicle_NA_3days_control_NA_82309
Matched control sample: GSM204830: LIVER_vehicle_NA_5days_control_NA_82312
Matched control sample: GSM204698: LIVER_vehicle_NA_1days_control_NA_82496
Matched control sample: GSM204643: LIVER_vehicle_NA_1days_control_NA_82497
Matched control sample: GSM204733: LIVER_vehicle_NA_3days_control_NA_82499
Matched control sample: GSM204794: LIVER_vehicle_NA_3days_control_NA_82500
Matched control sample: GSM204774: LIVER_vehicle_NA_3days_control_NA_82501
Matched control sample: GSM204717: LIVER_vehicle_NA_1days_control_NA_82848
Matched control sample: GSM204704: LIVER_vehicle_NA_1days_control_NA_82849
Matched control sample: GSM204678: LIVER_vehicle_NA_1days_control_NA_82850
Matched control sample: GSM204725: LIVER_vehicle_NA_3days_control_NA_82851
Matched control sample: GSM204776: LIVER_vehicle_NA_3days_control_NA_82852
Matched control sample: GSM204795: LIVER_vehicle_NA_3days_control_NA_82853
Matched control sample: GSM204837: LIVER_vehicle_NA_5days_control_NA_82855
Matched control sample: GSM204860: LIVER_vehicle_NA_5days_control_NA_82949
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

hyb_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. 12.5 ug of cRNA sample was fragmented in 40 mM Tris-acetate (TrisOAc) pH7.9, 100 mM KOAc and 31.5 mM MgOAc at 94oC for 20 min. This typically resulted in a fragmented cRNA with a size range between 100 to 200 bases. 10 ug of the fragmented cRNA was used for hybridization of each Rat-Uniset I (RU1) Expression BioArray (Amersham Biosciences, Piscataway, NJ) in a volume of 260 ul, containing 78 ul of CodeLink Hyb buffer component A and 130 ul of CodeLink Hyb buffer component B (Amersham Biosciences, Piscataway, NJ). The hybridization solution was denatured at 90oC for 5 min then chilled on ice. The sample was vortexed at maximum speed for 5 sec and centrifuged at maximum speed for 5 min before 250 ul of the solution was injected into the inlet port of the flex-hybridization chamber, and placed in a CodeLink 12-slide shaker tray. The hybridization ports were sealed with 1 cm sealing strips (Amersham Biosciences, Piscataway, NJ), and the shaker tray(s) containing the slides was loaded into a New Brunswick Innova 4080 shaking incubator, with the hybridization chambers facing up. Slides were incubated for 20 hr at 37oC, while shaking at 300 rpm. The 12-slide shaker tray was removed from the shaker, and the hybridization chamber removed from each slide. Each slide was placed into the BioArray Rack of the Parallel Processing Tool (Amersham Biosciences, Piscataway, NJ) and incubated with 0.75x TNT (0.075 M Tris-HCl, pH7.6, 0.1125 M NaCl, 0.0375 % Tween-20) at 46oC for 1hr. The BioArray Rack was moved from the TNT containing reservoir to the small reagent reservoir containing 1:500 dilution of streptavidin-Alexa 647 (Molecular Probes, Eugene, OR). The signal was developed for 30 min at room temperature, before the reaction was stopped and slides were washed four times for 5 min each in TNT buffer (0.1 M Tris-HCl, pH7.6, 0.15 M NaCl, 0.05% Tween-20) using a large reagent reservoir. The slides were rinsed in ddH2O with 0.05% Tween-20 twice for 5 sec each before they were dried by centrifugation with a Qiagen Sigma 4-15C centrifuge (Valencia, CA) using a swinging bucket rotor (2x96) for exactly 3 min at 2000rpm (acceleration at position 9 and deceleration at position 9). The dried slides were stored in light protective slide boxes at room temperature prior to scanning.

scan_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The Axon GenePix Scanner (Axon Instrument, Union City, CA) was calibrated using the Calibration Slide supplied by Axon Instrument with GenePix 4.0 at 635 nm using the Calibration System. After calibration of the scanner, all processed slides were scanned with the laser set to 635 nm, the photomultiplier tube (PMT) voltage to 600 and the scan resolution to 10 microns. For consistency all slides were scanned the same day of color development, within an hour after dry spinning them and the data was analyzed using the CodeLink Expression Analysis Software version 2.2.25 (Amersham Biosciences, Piscataway, NJ).

data_processing: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44, supplemental methods.  Prior to statistical computation, the spot reading data was normalized. For this purpose a new nonlinear normalization procedure, similar to the centralization approach reported in the literature (Zien et al., 2001) was developed for the CodeLink array platform. The normalization procedure uses proprietary algorithm that assumes that in general, for an array with many probes, the majority of the signal represents genes that have unchanged expressions compared to controls, with the extreme values representing the true biology of the process and not some artifact due to measurement noise. The algorithm does not make the assumption that the true mRNA abundance being measured is linearly proportional to the spot reading signal or any assumption about the error distribution of such signals or their differential. Rather, the assumption of unchanged signals representing the bulk of the signal measurements is used to center a nonlinear curve fit to a reference template. This reference template is constructed for a large set of time matched, same tissue and same vehicle, control arrays, computing a median log signal for each probe. The replicate size of this set is adequate to ensure very small random error in the ensemble signal level for each reference probe. The curve fit corrects for some array processing problems, such as partial signal saturation, and improves the overall quality of the data compared to simple linear normalization methods. Essentially the curve tracks the mode of the signal distribution for sets of genes against the expected value for that set.

label: biotin

molecule: polyA RNA

organism: Rattus norvegicus

label_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The methods used for cRNA preparation (cDNA synthesis, cRNA preparation, and cRNA purification) are essentially as described in the CodeLink™ manual v2.1 as supplied by Amersham Biosciences (Piscataway, NJ) using the Qiagen BioRobot 9604 (Valencia, CA). cDNA synthesis, cRNA preparation, and cRNA purification were completely processed in a 96-well format using the automated Qiagen BioRobot 9604 procedure. 0.6 – 20 ìg of enriched RNA from different tissue sources were added to a reaction mixture in a final volume of 12 ìl, containing bacterial control RNA (1.5pg FixA, 5pgYjeK, 5pg AraB, 15pg EntF, 50pg FixB, 150pg HisB, 500pg LeuB, 1500pg gnd) and 1.0 ìl of 100 pmol ìl-1 T7-(dT)24 oligonucleotide primer (Proligo, Boulder, CO). The T7-(dT)24 oligonucleotide primer used, is an HPLC purified 63-mer with the sequence : 5'-GGCCAGTGAATTGTAATACGACTCACTATAGGGAGGCGGTTTTTTTTTTTTTTTTTTTTTTTT-3'. The mixture was incubated for 10 min at 70oC and chilled on ice. On ice, 4 ul of 5x first-strand buffer, 2 ul 0.1 M DTT, 1 ul of 10 mM dNTP mix and 1 ul Superscript™II RNaseH-reverse transcriptase (200 U/ul) were added to the mixture to make a final volume of 20 ul. The mixture was incubated for 1 hr at 37oC. Second-strand cDNA was synthesized in a volume of 150 ul, containing 92 ul nuclease-free water, 30 ul of 5x second-strand buffer, 3 ul of 10 mM dNTP mix, 4 ul of Escherichia coli DNA polymerase I (10 U/ìl) and 1 ul of RNase H (2 U/ul) for 2 hr at 16oC. The cDNA was purified using a Qiagen QIAquick purification kit, and completely dried down using a Speed-Vac concentrator (45oC) for 2 hr. The dried product was resuspended in IVT reaction mix containing 3.0 ul of nuclease-free water, 4.0 ul 10x reaction buffer, 4.0 ul 75 mM ATP, 4.0 ul 75 mM GTP, 3.0 ul 75 mM CTP, 3.0 ul 75 mM UTP, 7.5 ul 10 mM Biotin 11-CTP, 7.5 ul 10 mM Biotin 11-UTP and 4.0 ul enzyme mix. The reaction mix was incubated for 14 hr at 37oC using an MJ Research 96-well PTC-200 Thermal Cycler (MJ Research, Waltham, MA), before the cRNA was purified using a Qiagen RNeasy® kit. The resulting cRNA yield was quantified using the 96-well ìQuan Universal Microplate Spectrophotometer Model MQX200 (BIO-TEK Instruments Inc., Winooski, VT) at a wavelength of 260 nm. Conformance of the cRNA sample to historical size distributions (the bulk of the cRNA product should be between 500 and 3,000 bases in size) was confirmed using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA). Samples not near the historical norm were reprocessed starting from tissue or RNA.

growth_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Sprague-Dawley (Crl:CD®(SD)|GS BR) rats (aged 6-8 weeks and weighing 200 - 260 g), were purchased from Charles River Laboratories (Wilmington, MA). They were housed in plastic cages for 1 week for acclimation to the laboratory environment of a ventilated room (temperature, 22oC ±3oC; humidity, 30 - 70%; light/dark cycle, 12 h d-1, 6:00am - 6:00pm) until use. Certified Rodent Diet #5002 (PMI Feeds Inc.) and chlorinated tap water was available ad libitum.

extract_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. Following sacrifice, 6 mm disposable biopsy punches (#REF 33-36 Miltex, Inc. Bethpage, NY) were used to obtain tissue samples of approximately 100 mg. Samples were placed in cryogenic tubes and snap frozen. Poly A(+)-RNA from tissue samples was isolated using the MagNA Pure LC robot (Roche, Basel, Switzerland) in combination with the MagNA Pure LC mRNA Isolation kit I and II (Roche, Basel, Switzerland) for cells (see supplemental methods section) and tissues, respectively. Tissue samples were completely homogenized directly from ~100 mg punches stored on dry ice prior to application of lysis buffer to a final concentration of 65 mg tissue per ml of buffer. After complete homogenization, using disposable Omni Tip Disposable Generator Probes (Omni Inc, Warrenton, VA) and before loading of the samples into the 32-well MagNA Pure plate, the samples were drawn up 5-6 times through a 20-gauge needle attached to a 3-ml syringe to ensure any tissue pieces or clumps were removed from the lysate prior to robotic processing. Tissue sample processing was performed in duplicate wells (loading 150 ul of homogenized sample to each well) of the MagNA Pure LC, which is programmed to extract mRNA using the oligo-dT selection method into a final elution volume of 100 ul. Poly A(+) RNA sample concentration was performed manually using a standard ethanol precipitation protocol in the presence of glycogen (50 ug/ml). After precipitation the final purified RNA sample was resuspended in 7 ìl DEPC-H2O and quantified using a Ribogreen high-range assay (Molecular Probes) on the Wallac Victor2 Fluorometer (Perkin-Elmer, Fremont, CA). Additionally, the integrity of each RNA sample was determined, by comparison to historical standards (no gross degradation should be visible as suggested by clear 18S and 28S peaks on top of a hump of complex RNA, with lower amounts of RNA below 18S than under and above the 18S peak), using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA) in combination with the RNA 6000 Nano Lab Chip kit (Agilent Technologies).

treatment_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Compounds were administered via the route of administration (ROA) that corresponds to that by which humans receive the drug. Compounds were typically administered orally (PO) (83%), intravenously (IV) (9.4%), subcutaneously (SC) (5.7%), or intraperitoneally (IP) (2%). If the compound is a toxicant or a biochemical standard, it was administered orally. For oral dosing, the vehicle choice largely depends on the solubility of the compound in water. Water-soluble compounds were administered in water. Insoluble compounds are administered in either corn oil or 0.5% carboxymethylcellulose (CMC) using the best literature recommendation as a guide. IV administered compounds were usually dissolved in saline and SC administered compounds in corn oil. The highest dose the rats receive is the Maximum Tolerated Dose (MTD). The dosing of animals was staggered based on intended harvest order to ensure that sacrifice occurred within 30 minutes of the recorded time point. Dosing frequency was as described in Sample_characteristics for the particular treatment.

tag: Sprague-Dawley

tag: age

value: 6 to 8 weeks

tag: sex

value: male

tag: tissue

value: LIVER

tag: treatment compound

tag: dose

value: 155 mg/kg

tag: solvent

value: SALINE

tag: administration route

value: INTRAVENOUS

tag: frequency of dosing

value: DAILY

tag: treatment duration

value: 3 days

tag: experiment date


title: LIVER_MEBENDAZOLE_714mg/kg_3days_exp4248_rep2_18909

description:
HybID: 18909
treated sample for experiment (RepID) 4248
replicate 2 of 2
Experimental sample
Replicate experimental sample: GSM222757: LIVER_MEBENDAZOLE_714mg/kg_3days_exp4248_rep1_19425
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, MEBENDAZOLE, 714mg/kg, 3 days

value: MEBENDAZOLE

value: 714 mg/kg

value: CORN OIL

value: ORAL GAVAGE


title: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep1_19858

description:
HybID: 19858
treated sample for experiment (RepID) 4253
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM222756: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep3_81454
Replicate experimental sample: GSM222755: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep2_81463
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, MEBENDAZOLE, 714mg/kg, 1 days

value: 1 days


title: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep1_82964

description:
HybID: 82964
treated sample for experiment (RepID) 5288
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220332: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep3_82932
Replicate experimental sample: GSM220331: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep2_82933
Matched control sample: GSM204726: LIVER_vehicle_NA_3days_control_NA_82309
Matched control sample: GSM204830: LIVER_vehicle_NA_5days_control_NA_82312
Matched control sample: GSM204698: LIVER_vehicle_NA_1days_control_NA_82496
Matched control sample: GSM204643: LIVER_vehicle_NA_1days_control_NA_82497
Matched control sample: GSM204733: LIVER_vehicle_NA_3days_control_NA_82499
Matched control sample: GSM204794: LIVER_vehicle_NA_3days_control_NA_82500
Matched control sample: GSM204774: LIVER_vehicle_NA_3days_control_NA_82501
Matched control sample: GSM204717: LIVER_vehicle_NA_1days_control_NA_82848
Matched control sample: GSM204704: LIVER_vehicle_NA_1days_control_NA_82849
Matched control sample: GSM204678: LIVER_vehicle_NA_1days_control_NA_82850
Matched control sample: GSM204725: LIVER_vehicle_NA_3days_control_NA_82851
Matched control sample: GSM204776: LIVER_vehicle_NA_3days_control_NA_82852
Matched control sample: GSM204795: LIVER_vehicle_NA_3days_control_NA_82853
Matched control sample: GSM204837: LIVER_vehicle_NA_5days_control_NA_82855
Matched control sample: GSM204860: LIVER_vehicle_NA_5days_control_NA_82949
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 4-METHYLPYRAZOLE, 155mg/kg, 1 days


title: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep2_81463

description:
HybID: 81463
treated sample for experiment (RepID) 4253
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM222754: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep1_19858
Replicate experimental sample: GSM222756: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep3_81454
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep3_19422

description:
HybID: 19422
treated sample for experiment (RepID) 4247
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM222749: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep1_18908
Replicate experimental sample: GSM222750: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep2_81453
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, MEBENDAZOLE, 50mg/kg, .25 days

value: 50 mg/kg

value: .25 days


title: LIVER_MEBENDAZOLE_50mg/kg_1days_exp4246_rep1_81400

description:
HybID: 81400
treated sample for experiment (RepID) 4246
replicate 1 of 2
Experimental sample
Replicate experimental sample: GSM222753: LIVER_MEBENDAZOLE_50mg/kg_1days_exp4246_rep2_18772
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, MEBENDAZOLE, 50mg/kg, 1 days


title: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep2_82933

description:
HybID: 82933
treated sample for experiment (RepID) 5288
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220332: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep3_82932
Replicate experimental sample: GSM220330: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep1_82964
Matched control sample: GSM204726: LIVER_vehicle_NA_3days_control_NA_82309
Matched control sample: GSM204830: LIVER_vehicle_NA_5days_control_NA_82312
Matched control sample: GSM204698: LIVER_vehicle_NA_1days_control_NA_82496
Matched control sample: GSM204643: LIVER_vehicle_NA_1days_control_NA_82497
Matched control sample: GSM204733: LIVER_vehicle_NA_3days_control_NA_82499
Matched control sample: GSM204794: LIVER_vehicle_NA_3days_control_NA_82500
Matched control sample: GSM204774: LIVER_vehicle_NA_3days_control_NA_82501
Matched control sample: GSM204717: LIVER_vehicle_NA_1days_control_NA_82848
Matched control sample: GSM204704: LIVER_vehicle_NA_1days_control_NA_82849
Matched control sample: GSM204678: LIVER_vehicle_NA_1days_control_NA_82850
Matched control sample: GSM204725: LIVER_vehicle_NA_3days_control_NA_82851
Matched control sample: GSM204776: LIVER_vehicle_NA_3days_control_NA_82852
Matched control sample: GSM204795: LIVER_vehicle_NA_3days_control_NA_82853
Matched control sample: GSM204837: LIVER_vehicle_NA_5days_control_NA_82855
Matched control sample: GSM204860: LIVER_vehicle_NA_5days_control_NA_82949
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep1_83154

description:
HybID: 83154
treated sample for experiment (RepID) 5300
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220334: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep2_82934
Replicate experimental sample: GSM220335: LIVER_4-METHYLPYRAZOLE_155mg/kg_3days_exp5300_rep3_82935
Matched control sample: GSM204726: LIVER_vehicle_NA_3days_control_NA_82309
Matched control sample: GSM204830: LIVER_vehicle_NA_5days_control_NA_82312
Matched control sample: GSM204698: LIVER_vehicle_NA_1days_control_NA_82496
Matched control sample: GSM204643: LIVER_vehicle_NA_1days_control_NA_82497
Matched control sample: GSM204733: LIVER_vehicle_NA_3days_control_NA_82499
Matched control sample: GSM204794: LIVER_vehicle_NA_3days_control_NA_82500
Matched control sample: GSM204774: LIVER_vehicle_NA_3days_control_NA_82501
Matched control sample: GSM204717: LIVER_vehicle_NA_1days_control_NA_82848
Matched control sample: GSM204704: LIVER_vehicle_NA_1days_control_NA_82849
Matched control sample: GSM204678: LIVER_vehicle_NA_1days_control_NA_82850
Matched control sample: GSM204725: LIVER_vehicle_NA_3days_control_NA_82851
Matched control sample: GSM204776: LIVER_vehicle_NA_3days_control_NA_82852
Matched control sample: GSM204795: LIVER_vehicle_NA_3days_control_NA_82853
Matched control sample: GSM204837: LIVER_vehicle_NA_5days_control_NA_82855
Matched control sample: GSM204860: LIVER_vehicle_NA_5days_control_NA_82949
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep1_86781

description:
HybID: 86781
treated sample for experiment (RepID) 6345
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220320: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep3_86718
Replicate experimental sample: GSM220319: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep2_86764
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 3-METHYLCHOLANTHRENE, 300mg/kg, 5 days

value: 300 mg/kg

value: CMC

value: 5 days


title: LIVER_MEBENDAZOLE_714mg/kg_3days_exp4248_rep1_19425

description:
HybID: 19425
treated sample for experiment (RepID) 4248
replicate 1 of 2
Experimental sample
Replicate experimental sample: GSM222758: LIVER_MEBENDAZOLE_714mg/kg_3days_exp4248_rep2_18909
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 6 to 8 weeks

value: male


title: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep3_82932

description:
HybID: 82932
treated sample for experiment (RepID) 5288
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220331: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep2_82933
Replicate experimental sample: GSM220330: LIVER_4-METHYLPYRAZOLE_155mg/kg_1days_exp5288_rep1_82964
Matched control sample: GSM204726: LIVER_vehicle_NA_3days_control_NA_82309
Matched control sample: GSM204830: LIVER_vehicle_NA_5days_control_NA_82312
Matched control sample: GSM204698: LIVER_vehicle_NA_1days_control_NA_82496
Matched control sample: GSM204643: LIVER_vehicle_NA_1days_control_NA_82497
Matched control sample: GSM204733: LIVER_vehicle_NA_3days_control_NA_82499
Matched control sample: GSM204794: LIVER_vehicle_NA_3days_control_NA_82500
Matched control sample: GSM204774: LIVER_vehicle_NA_3days_control_NA_82501
Matched control sample: GSM204717: LIVER_vehicle_NA_1days_control_NA_82848
Matched control sample: GSM204704: LIVER_vehicle_NA_1days_control_NA_82849
Matched control sample: GSM204678: LIVER_vehicle_NA_1days_control_NA_82850
Matched control sample: GSM204725: LIVER_vehicle_NA_3days_control_NA_82851
Matched control sample: GSM204776: LIVER_vehicle_NA_3days_control_NA_82852
Matched control sample: GSM204795: LIVER_vehicle_NA_3days_control_NA_82853
Matched control sample: GSM204837: LIVER_vehicle_NA_5days_control_NA_82855
Matched control sample: GSM204860: LIVER_vehicle_NA_5days_control_NA_82949
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: LIVER

value: 155 mg/kg


title: LIVER_MEBENDAZOLE_50mg/kg_1days_exp4246_rep2_18772

description:
HybID: 18772
treated sample for experiment (RepID) 4246
replicate 2 of 2
Experimental sample
Replicate experimental sample: GSM222752: LIVER_MEBENDAZOLE_50mg/kg_1days_exp4246_rep1_81400
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep2_81453

description:
HybID: 81453
treated sample for experiment (RepID) 4247
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM222749: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep1_18908
Replicate experimental sample: GSM222751: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep3_19422
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep2_86764

description:
HybID: 86764
treated sample for experiment (RepID) 6345
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220320: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep3_86718
Replicate experimental sample: GSM220318: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep1_86781
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep3_86718

description:
HybID: 86718
treated sample for experiment (RepID) 6345
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220319: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep2_86764
Replicate experimental sample: GSM220318: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_5days_exp6345_rep1_86781
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_MEFENAMIC_ACID_93mg/kg_1days_exp4428_rep3_19307

description:
HybID: 19307
treated sample for experiment (RepID) 4428
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM222763: LIVER_MEFENAMIC_ACID_93mg/kg_1days_exp4428_rep2_19305
Replicate experimental sample: GSM222762: LIVER_MEFENAMIC_ACID_93mg/kg_1days_exp4428_rep1_19306
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, MEFENAMIC ACID, 93mg/kg, 1 days

value: MEFENAMIC ACID

value: 93 mg/kg


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep3_86771

description:
HybID: 86771
treated sample for experiment (RepID) 6337
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220312: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep1_86746
Replicate experimental sample: GSM220313: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep2_86748
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 3-METHYLCHOLANTHRENE, 300mg/kg, 1 days

value: DAILY


title: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep2_80710

description:
HybID: 80710
treated sample for experiment (RepID) 4754
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM222701: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep3_80709
Replicate experimental sample: GSM222699: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep1_80711
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, LOMEFLOXACIN, 2000mg/kg, 5 days

value: LOMEFLOXACIN


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep2_86768

description:
HybID: 86768
treated sample for experiment (RepID) 6330
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220317: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep3_86760
Replicate experimental sample: GSM220315: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep1_86924
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 3-METHYLCHOLANTHRENE, 300mg/kg, 3 days

value: 3 days


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep3_86760

description:
HybID: 86760
treated sample for experiment (RepID) 6330
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220316: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep2_86768
Replicate experimental sample: GSM220315: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep1_86924
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep3_81454

description:
HybID: 81454
treated sample for experiment (RepID) 4253
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM222754: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep1_19858
Replicate experimental sample: GSM222755: LIVER_MEBENDAZOLE_714mg/kg_1days_exp4253_rep2_81463
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: MEBENDAZOLE

value: 714 mg/kg

value: CORN OIL


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep1_86924

description:
HybID: 86924
treated sample for experiment (RepID) 6330
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220317: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep3_86760
Replicate experimental sample: GSM220316: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_3days_exp6330_rep2_86768
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: ORAL GAVAGE


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep1_86746

description:
HybID: 86746
treated sample for experiment (RepID) 6337
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220313: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep2_86748
Replicate experimental sample: GSM220314: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep3_86771
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 1 days


title: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep1_18908

description:
HybID: 18908
treated sample for experiment (RepID) 4247
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM222751: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep3_19422
Replicate experimental sample: GSM222750: LIVER_MEBENDAZOLE_50mg/kg_.25days_exp4247_rep2_81453
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 50 mg/kg

value: .25 days


title: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep1_80711

description:
HybID: 80711
treated sample for experiment (RepID) 4754
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM222701: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep3_80709
Replicate experimental sample: GSM222700: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep2_80710
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CMC

value: 5 days


title: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep3_80706

description:
HybID: 80706
treated sample for experiment (RepID) 4768
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM222697: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep2_80707
Replicate experimental sample: GSM222696: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep1_80708
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, LOMEFLOXACIN, 2000mg/kg, 3 days

value: 6 to 8 weeks

value: male


title: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep3_86656

description:
HybID: 86656
treated sample for experiment (RepID) 6307
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220306: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep1_86657
Replicate experimental sample: GSM220307: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep2_86658
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 3-METHYLCHOLANTHRENE, 12.5mg/kg, 5 days

value: LIVER


title: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep3_80709

description:
HybID: 80709
treated sample for experiment (RepID) 4754
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM222700: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep2_80710
Replicate experimental sample: GSM222699: LIVER_LOMEFLOXACIN_2000mg/kg_5days_exp4754_rep1_80711
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep2_86658

description:
HybID: 86658
treated sample for experiment (RepID) 6307
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220308: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep3_86656
Replicate experimental sample: GSM220306: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep1_86657
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep2_80707

description:
HybID: 80707
treated sample for experiment (RepID) 4768
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM222698: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep3_80706
Replicate experimental sample: GSM222696: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep1_80708
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep1_86662

description:
HybID: 86662
treated sample for experiment (RepID) 6308
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220310: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep2_86663
Replicate experimental sample: GSM220311: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep3_86664
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 3-METHYLCHOLANTHRENE, 12.5mg/kg, 91 days

value: 91 days


title: LIVER_LOMEFLOXACIN_2000mg/kg_1days_exp4772_rep2_81213

description:
HybID: 81213
treated sample for experiment (RepID) 4772
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM222693: LIVER_LOMEFLOXACIN_2000mg/kg_1days_exp4772_rep1_80705
Replicate experimental sample: GSM222695: LIVER_LOMEFLOXACIN_2000mg/kg_1days_exp4772_rep3_80941
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, LOMEFLOXACIN, 2000mg/kg, 1 days


title: LIVER_LOMEFLOXACIN_2000mg/kg_1days_exp4772_rep1_80705

description:
HybID: 80705
treated sample for experiment (RepID) 4772
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM222695: LIVER_LOMEFLOXACIN_2000mg/kg_1days_exp4772_rep3_80941
Replicate experimental sample: GSM222694: LIVER_LOMEFLOXACIN_2000mg/kg_1days_exp4772_rep2_81213
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep2_86663

description:
HybID: 86663
treated sample for experiment (RepID) 6308
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220309: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep1_86662
Replicate experimental sample: GSM220311: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep3_86664
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep1_80708

description:
HybID: 80708
treated sample for experiment (RepID) 4768
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM222698: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep3_80706
Replicate experimental sample: GSM222697: LIVER_LOMEFLOXACIN_2000mg/kg_3days_exp4768_rep2_80707
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_28days_exp6311_rep2_86659

description:
HybID: 86659
treated sample for experiment (RepID) 6311
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220303: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_28days_exp6311_rep1_86660
Replicate experimental sample: GSM220305: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_28days_exp6311_rep3_86661
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 3-METHYLCHOLANTHRENE, 12.5mg/kg, 28 days

value: 28 days


title: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep1_86657

description:
HybID: 86657
treated sample for experiment (RepID) 6307
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220308: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep3_86656
Replicate experimental sample: GSM220307: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_5days_exp6307_rep2_86658
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: DAILY


title: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_28days_exp6311_rep3_86661

description:
HybID: 86661
treated sample for experiment (RepID) 6311
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220304: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_28days_exp6311_rep2_86659
Replicate experimental sample: GSM220303: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_28days_exp6311_rep1_86660
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep3_86664

description:
HybID: 86664
treated sample for experiment (RepID) 6308
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220309: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep1_86662
Replicate experimental sample: GSM220310: LIVER_3-METHYLCHOLANTHRENE_12.5mg/kg_91days_exp6308_rep2_86663
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep3_86784

description:
HybID: 86784
treated sample for experiment (RepID) 6339
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220267: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep1_86722
Replicate experimental sample: GSM220268: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep2_86770
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN, .02mg/kg, 1 days

value: .02 mg/kg


title: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep2_86770

description:
HybID: 86770
treated sample for experiment (RepID) 6339
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220267: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep1_86722
Replicate experimental sample: GSM220269: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep3_86784
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_3days_exp6332_rep2_86730

description:
HybID: 86730
treated sample for experiment (RepID) 6332
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220272: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_3days_exp6332_rep3_86740
Replicate experimental sample: GSM220270: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_3days_exp6332_rep1_86754
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, 2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN, .02mg/kg, 3 days

value: 3 days


title: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep2_86748

description:
HybID: 86748
treated sample for experiment (RepID) 6337
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220312: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep1_86746
Replicate experimental sample: GSM220314: LIVER_3-METHYLCHOLANTHRENE_300mg/kg_1days_exp6337_rep3_86771
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 300 mg/kg


title: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep1_86722

description:
HybID: 86722
treated sample for experiment (RepID) 6339
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220268: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep2_86770
Replicate experimental sample: GSM220269: LIVER_2,3,7,8-TETRACHLORODIBENZO-P-DIOXIN_.02mg/kg_1days_exp6339_rep3_86784
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf