title: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep2_86864

description:
HybID: 86864
treated sample for experiment (RepID) 6367
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223768: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep1_86863
Replicate experimental sample: GSM223770: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep3_86865
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, ROFECOXIB, 1550mg/kg, 1 days


title: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep1_86891

status: Public on Mar 28 2008

type: RNA

city: Mountain View

first: Jeremy

last: Gollub

state: CA

address: 325 E. Middlefield Rd.

country: USA

institute: Iconix Biosciences

description:
HybID: 86891
treated sample for experiment (RepID) 6407
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223773: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep3_86866
Replicate experimental sample: GSM223772: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep2_86915
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

hyb_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. 12.5 ug of cRNA sample was fragmented in 40 mM Tris-acetate (TrisOAc) pH7.9, 100 mM KOAc and 31.5 mM MgOAc at 94oC for 20 min. This typically resulted in a fragmented cRNA with a size range between 100 to 200 bases. 10 ug of the fragmented cRNA was used for hybridization of each Rat-Uniset I (RU1) Expression BioArray (Amersham Biosciences, Piscataway, NJ) in a volume of 260 ul, containing 78 ul of CodeLink Hyb buffer component A and 130 ul of CodeLink Hyb buffer component B (Amersham Biosciences, Piscataway, NJ). The hybridization solution was denatured at 90oC for 5 min then chilled on ice. The sample was vortexed at maximum speed for 5 sec and centrifuged at maximum speed for 5 min before 250 ul of the solution was injected into the inlet port of the flex-hybridization chamber, and placed in a CodeLink 12-slide shaker tray. The hybridization ports were sealed with 1 cm sealing strips (Amersham Biosciences, Piscataway, NJ), and the shaker tray(s) containing the slides was loaded into a New Brunswick Innova 4080 shaking incubator, with the hybridization chambers facing up. Slides were incubated for 20 hr at 37oC, while shaking at 300 rpm. The 12-slide shaker tray was removed from the shaker, and the hybridization chamber removed from each slide. Each slide was placed into the BioArray Rack of the Parallel Processing Tool (Amersham Biosciences, Piscataway, NJ) and incubated with 0.75x TNT (0.075 M Tris-HCl, pH7.6, 0.1125 M NaCl, 0.0375 % Tween-20) at 46oC for 1hr. The BioArray Rack was moved from the TNT containing reservoir to the small reagent reservoir containing 1:500 dilution of streptavidin-Alexa 647 (Molecular Probes, Eugene, OR). The signal was developed for 30 min at room temperature, before the reaction was stopped and slides were washed four times for 5 min each in TNT buffer (0.1 M Tris-HCl, pH7.6, 0.15 M NaCl, 0.05% Tween-20) using a large reagent reservoir. The slides were rinsed in ddH2O with 0.05% Tween-20 twice for 5 sec each before they were dried by centrifugation with a Qiagen Sigma 4-15C centrifuge (Valencia, CA) using a swinging bucket rotor (2x96) for exactly 3 min at 2000rpm (acceleration at position 9 and deceleration at position 9). The dried slides were stored in light protective slide boxes at room temperature prior to scanning.

scan_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The Axon GenePix Scanner (Axon Instrument, Union City, CA) was calibrated using the Calibration Slide supplied by Axon Instrument with GenePix 4.0 at 635 nm using the Calibration System. After calibration of the scanner, all processed slides were scanned with the laser set to 635 nm, the photomultiplier tube (PMT) voltage to 600 and the scan resolution to 10 microns. For consistency all slides were scanned the same day of color development, within an hour after dry spinning them and the data was analyzed using the CodeLink Expression Analysis Software version 2.2.25 (Amersham Biosciences, Piscataway, NJ).

data_processing: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44, supplemental methods.  Prior to statistical computation, the spot reading data was normalized. For this purpose a new nonlinear normalization procedure, similar to the centralization approach reported in the literature (Zien et al., 2001) was developed for the CodeLink array platform. The normalization procedure uses proprietary algorithm that assumes that in general, for an array with many probes, the majority of the signal represents genes that have unchanged expressions compared to controls, with the extreme values representing the true biology of the process and not some artifact due to measurement noise. The algorithm does not make the assumption that the true mRNA abundance being measured is linearly proportional to the spot reading signal or any assumption about the error distribution of such signals or their differential. Rather, the assumption of unchanged signals representing the bulk of the signal measurements is used to center a nonlinear curve fit to a reference template. This reference template is constructed for a large set of time matched, same tissue and same vehicle, control arrays, computing a median log signal for each probe. The replicate size of this set is adequate to ensure very small random error in the ensemble signal level for each reference probe. The curve fit corrects for some array processing problems, such as partial signal saturation, and improves the overall quality of the data compared to simple linear normalization methods. Essentially the curve tracks the mode of the signal distribution for sets of genes against the expected value for that set.

label: biotin

molecule: polyA RNA

organism: Rattus norvegicus

source_name: LIVER, ROFECOXIB, 1550mg/kg, 3 days

label_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The methods used for cRNA preparation (cDNA synthesis, cRNA preparation, and cRNA purification) are essentially as described in the CodeLink™ manual v2.1 as supplied by Amersham Biosciences (Piscataway, NJ) using the Qiagen BioRobot 9604 (Valencia, CA). cDNA synthesis, cRNA preparation, and cRNA purification were completely processed in a 96-well format using the automated Qiagen BioRobot 9604 procedure. 0.6 – 20 ìg of enriched RNA from different tissue sources were added to a reaction mixture in a final volume of 12 ìl, containing bacterial control RNA (1.5pg FixA, 5pgYjeK, 5pg AraB, 15pg EntF, 50pg FixB, 150pg HisB, 500pg LeuB, 1500pg gnd) and 1.0 ìl of 100 pmol ìl-1 T7-(dT)24 oligonucleotide primer (Proligo, Boulder, CO). The T7-(dT)24 oligonucleotide primer used, is an HPLC purified 63-mer with the sequence : 5'-GGCCAGTGAATTGTAATACGACTCACTATAGGGAGGCGGTTTTTTTTTTTTTTTTTTTTTTTT-3'. The mixture was incubated for 10 min at 70oC and chilled on ice. On ice, 4 ul of 5x first-strand buffer, 2 ul 0.1 M DTT, 1 ul of 10 mM dNTP mix and 1 ul Superscript™II RNaseH-reverse transcriptase (200 U/ul) were added to the mixture to make a final volume of 20 ul. The mixture was incubated for 1 hr at 37oC. Second-strand cDNA was synthesized in a volume of 150 ul, containing 92 ul nuclease-free water, 30 ul of 5x second-strand buffer, 3 ul of 10 mM dNTP mix, 4 ul of Escherichia coli DNA polymerase I (10 U/ìl) and 1 ul of RNase H (2 U/ul) for 2 hr at 16oC. The cDNA was purified using a Qiagen QIAquick purification kit, and completely dried down using a Speed-Vac concentrator (45oC) for 2 hr. The dried product was resuspended in IVT reaction mix containing 3.0 ul of nuclease-free water, 4.0 ul 10x reaction buffer, 4.0 ul 75 mM ATP, 4.0 ul 75 mM GTP, 3.0 ul 75 mM CTP, 3.0 ul 75 mM UTP, 7.5 ul 10 mM Biotin 11-CTP, 7.5 ul 10 mM Biotin 11-UTP and 4.0 ul enzyme mix. The reaction mix was incubated for 14 hr at 37oC using an MJ Research 96-well PTC-200 Thermal Cycler (MJ Research, Waltham, MA), before the cRNA was purified using a Qiagen RNeasy® kit. The resulting cRNA yield was quantified using the 96-well ìQuan Universal Microplate Spectrophotometer Model MQX200 (BIO-TEK Instruments Inc., Winooski, VT) at a wavelength of 260 nm. Conformance of the cRNA sample to historical size distributions (the bulk of the cRNA product should be between 500 and 3,000 bases in size) was confirmed using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA). Samples not near the historical norm were reprocessed starting from tissue or RNA.

growth_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Sprague-Dawley (Crl:CD®(SD)|GS BR) rats (aged 6-8 weeks and weighing 200 - 260 g), were purchased from Charles River Laboratories (Wilmington, MA). They were housed in plastic cages for 1 week for acclimation to the laboratory environment of a ventilated room (temperature, 22oC ±3oC; humidity, 30 - 70%; light/dark cycle, 12 h d-1, 6:00am - 6:00pm) until use. Certified Rodent Diet #5002 (PMI Feeds Inc.) and chlorinated tap water was available ad libitum.

extract_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. Following sacrifice, 6 mm disposable biopsy punches (#REF 33-36 Miltex, Inc. Bethpage, NY) were used to obtain tissue samples of approximately 100 mg. Samples were placed in cryogenic tubes and snap frozen. Poly A(+)-RNA from tissue samples was isolated using the MagNA Pure LC robot (Roche, Basel, Switzerland) in combination with the MagNA Pure LC mRNA Isolation kit I and II (Roche, Basel, Switzerland) for cells (see supplemental methods section) and tissues, respectively. Tissue samples were completely homogenized directly from ~100 mg punches stored on dry ice prior to application of lysis buffer to a final concentration of 65 mg tissue per ml of buffer. After complete homogenization, using disposable Omni Tip Disposable Generator Probes (Omni Inc, Warrenton, VA) and before loading of the samples into the 32-well MagNA Pure plate, the samples were drawn up 5-6 times through a 20-gauge needle attached to a 3-ml syringe to ensure any tissue pieces or clumps were removed from the lysate prior to robotic processing. Tissue sample processing was performed in duplicate wells (loading 150 ul of homogenized sample to each well) of the MagNA Pure LC, which is programmed to extract mRNA using the oligo-dT selection method into a final elution volume of 100 ul. Poly A(+) RNA sample concentration was performed manually using a standard ethanol precipitation protocol in the presence of glycogen (50 ug/ml). After precipitation the final purified RNA sample was resuspended in 7 ìl DEPC-H2O and quantified using a Ribogreen high-range assay (Molecular Probes) on the Wallac Victor2 Fluorometer (Perkin-Elmer, Fremont, CA). Additionally, the integrity of each RNA sample was determined, by comparison to historical standards (no gross degradation should be visible as suggested by clear 18S and 28S peaks on top of a hump of complex RNA, with lower amounts of RNA below 18S than under and above the 18S peak), using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA) in combination with the RNA 6000 Nano Lab Chip kit (Agilent Technologies).

treatment_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Compounds were administered via the route of administration (ROA) that corresponds to that by which humans receive the drug. Compounds were typically administered orally (PO) (83%), intravenously (IV) (9.4%), subcutaneously (SC) (5.7%), or intraperitoneally (IP) (2%). If the compound is a toxicant or a biochemical standard, it was administered orally. For oral dosing, the vehicle choice largely depends on the solubility of the compound in water. Water-soluble compounds were administered in water. Insoluble compounds are administered in either corn oil or 0.5% carboxymethylcellulose (CMC) using the best literature recommendation as a guide. IV administered compounds were usually dissolved in saline and SC administered compounds in corn oil. The highest dose the rats receive is the Maximum Tolerated Dose (MTD). The dosing of animals was staggered based on intended harvest order to ensure that sacrifice occurred within 30 minutes of the recorded time point. Dosing frequency was as described in Sample_characteristics for the particular treatment.

tag: Sprague-Dawley

tag: age

value: 6 to 8 weeks

tag: sex

value: male

tag: tissue

value: LIVER

tag: treatment compound

value: ROFECOXIB

tag: dose

tag: solvent

value: CORN OIL

tag: administration route

value: ORAL GAVAGE

tag: frequency of dosing

value: DAILY

tag: treatment duration

value: 3 days

tag: experiment date


title: LIVER_ROFECOXIB_250mg/kg_3days_exp6539_rep3_87389

description:
HybID: 87389
treated sample for experiment (RepID) 6539
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223778: LIVER_ROFECOXIB_250mg/kg_3days_exp6539_rep2_87387
Replicate experimental sample: GSM223777: LIVER_ROFECOXIB_250mg/kg_3days_exp6539_rep1_87388
Matched control sample: GSM204657: LIVER_vehicle_NA_1days_control_NA_87149
Matched control sample: GSM204719: LIVER_vehicle_NA_1days_control_NA_87150
Matched control sample: GSM204697: LIVER_vehicle_NA_1days_control_NA_87151
Matched control sample: GSM204759: LIVER_vehicle_NA_3days_control_NA_87152
Matched control sample: GSM204796: LIVER_vehicle_NA_3days_control_NA_87153
Matched control sample: GSM204785: LIVER_vehicle_NA_3days_control_NA_87154
Matched control sample: GSM204871: LIVER_vehicle_NA_5days_control_NA_87155
Matched control sample: GSM204839: LIVER_vehicle_NA_5days_control_NA_87156
Matched control sample: GSM204861: LIVER_vehicle_NA_5days_control_NA_87215
Matched control sample: GSM204714: LIVER_vehicle_NA_1days_control_NA_87337
Matched control sample: GSM204637: LIVER_vehicle_NA_1days_control_NA_87338
Matched control sample: GSM204689: LIVER_vehicle_NA_1days_control_NA_87339
Matched control sample: GSM204793: LIVER_vehicle_NA_3days_control_NA_87340
Matched control sample: GSM204753: LIVER_vehicle_NA_3days_control_NA_87341
Matched control sample: GSM204778: LIVER_vehicle_NA_3days_control_NA_87342
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, ROFECOXIB, 250mg/kg, 3 days

value: 250 mg/kg


title: LIVER_ROFECOXIB_250mg/kg_3days_exp6539_rep1_87388

description:
HybID: 87388
treated sample for experiment (RepID) 6539
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223778: LIVER_ROFECOXIB_250mg/kg_3days_exp6539_rep2_87387
Replicate experimental sample: GSM223779: LIVER_ROFECOXIB_250mg/kg_3days_exp6539_rep3_87389
Matched control sample: GSM204657: LIVER_vehicle_NA_1days_control_NA_87149
Matched control sample: GSM204719: LIVER_vehicle_NA_1days_control_NA_87150
Matched control sample: GSM204697: LIVER_vehicle_NA_1days_control_NA_87151
Matched control sample: GSM204759: LIVER_vehicle_NA_3days_control_NA_87152
Matched control sample: GSM204796: LIVER_vehicle_NA_3days_control_NA_87153
Matched control sample: GSM204785: LIVER_vehicle_NA_3days_control_NA_87154
Matched control sample: GSM204871: LIVER_vehicle_NA_5days_control_NA_87155
Matched control sample: GSM204839: LIVER_vehicle_NA_5days_control_NA_87156
Matched control sample: GSM204861: LIVER_vehicle_NA_5days_control_NA_87215
Matched control sample: GSM204714: LIVER_vehicle_NA_1days_control_NA_87337
Matched control sample: GSM204637: LIVER_vehicle_NA_1days_control_NA_87338
Matched control sample: GSM204689: LIVER_vehicle_NA_1days_control_NA_87339
Matched control sample: GSM204793: LIVER_vehicle_NA_3days_control_NA_87340
Matched control sample: GSM204753: LIVER_vehicle_NA_3days_control_NA_87341
Matched control sample: GSM204778: LIVER_vehicle_NA_3days_control_NA_87342
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_ROFECOXIB_800mg/kg_1days_exp6537_rep2_87390

description:
HybID: 87390
treated sample for experiment (RepID) 6537
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223801: LIVER_ROFECOXIB_800mg/kg_1days_exp6537_rep3_87391
Replicate experimental sample: GSM223799: LIVER_ROFECOXIB_800mg/kg_1days_exp6537_rep1_87392
Matched control sample: GSM204657: LIVER_vehicle_NA_1days_control_NA_87149
Matched control sample: GSM204719: LIVER_vehicle_NA_1days_control_NA_87150
Matched control sample: GSM204697: LIVER_vehicle_NA_1days_control_NA_87151
Matched control sample: GSM204759: LIVER_vehicle_NA_3days_control_NA_87152
Matched control sample: GSM204796: LIVER_vehicle_NA_3days_control_NA_87153
Matched control sample: GSM204785: LIVER_vehicle_NA_3days_control_NA_87154
Matched control sample: GSM204871: LIVER_vehicle_NA_5days_control_NA_87155
Matched control sample: GSM204839: LIVER_vehicle_NA_5days_control_NA_87156
Matched control sample: GSM204861: LIVER_vehicle_NA_5days_control_NA_87215
Matched control sample: GSM204714: LIVER_vehicle_NA_1days_control_NA_87337
Matched control sample: GSM204637: LIVER_vehicle_NA_1days_control_NA_87338
Matched control sample: GSM204689: LIVER_vehicle_NA_1days_control_NA_87339
Matched control sample: GSM204793: LIVER_vehicle_NA_3days_control_NA_87340
Matched control sample: GSM204753: LIVER_vehicle_NA_3days_control_NA_87341
Matched control sample: GSM204778: LIVER_vehicle_NA_3days_control_NA_87342
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, ROFECOXIB, 800mg/kg, 1 days

value: 800 mg/kg

value: 1 days


title: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep3_86865

description:
HybID: 86865
treated sample for experiment (RepID) 6367
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223768: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep1_86863
Replicate experimental sample: GSM223769: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep2_86864
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep3_86866

description:
HybID: 86866
treated sample for experiment (RepID) 6407
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223771: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep1_86891
Replicate experimental sample: GSM223772: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep2_86915
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_ROFECOXIB_800mg/kg_1days_exp6537_rep1_87392

description:
HybID: 87392
treated sample for experiment (RepID) 6537
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223800: LIVER_ROFECOXIB_800mg/kg_1days_exp6537_rep2_87390
Replicate experimental sample: GSM223801: LIVER_ROFECOXIB_800mg/kg_1days_exp6537_rep3_87391
Matched control sample: GSM204657: LIVER_vehicle_NA_1days_control_NA_87149
Matched control sample: GSM204719: LIVER_vehicle_NA_1days_control_NA_87150
Matched control sample: GSM204697: LIVER_vehicle_NA_1days_control_NA_87151
Matched control sample: GSM204759: LIVER_vehicle_NA_3days_control_NA_87152
Matched control sample: GSM204796: LIVER_vehicle_NA_3days_control_NA_87153
Matched control sample: GSM204785: LIVER_vehicle_NA_3days_control_NA_87154
Matched control sample: GSM204871: LIVER_vehicle_NA_5days_control_NA_87155
Matched control sample: GSM204839: LIVER_vehicle_NA_5days_control_NA_87156
Matched control sample: GSM204861: LIVER_vehicle_NA_5days_control_NA_87215
Matched control sample: GSM204714: LIVER_vehicle_NA_1days_control_NA_87337
Matched control sample: GSM204637: LIVER_vehicle_NA_1days_control_NA_87338
Matched control sample: GSM204689: LIVER_vehicle_NA_1days_control_NA_87339
Matched control sample: GSM204793: LIVER_vehicle_NA_3days_control_NA_87340
Matched control sample: GSM204753: LIVER_vehicle_NA_3days_control_NA_87341
Matched control sample: GSM204778: LIVER_vehicle_NA_3days_control_NA_87342
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_ROFECOXIB_250mg/kg_1days_exp6545_rep1_87385

description:
HybID: 87385
treated sample for experiment (RepID) 6545
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223776: LIVER_ROFECOXIB_250mg/kg_1days_exp6545_rep3_87384
Replicate experimental sample: GSM223775: LIVER_ROFECOXIB_250mg/kg_1days_exp6545_rep2_87386
Matched control sample: GSM204657: LIVER_vehicle_NA_1days_control_NA_87149
Matched control sample: GSM204719: LIVER_vehicle_NA_1days_control_NA_87150
Matched control sample: GSM204697: LIVER_vehicle_NA_1days_control_NA_87151
Matched control sample: GSM204759: LIVER_vehicle_NA_3days_control_NA_87152
Matched control sample: GSM204796: LIVER_vehicle_NA_3days_control_NA_87153
Matched control sample: GSM204785: LIVER_vehicle_NA_3days_control_NA_87154
Matched control sample: GSM204871: LIVER_vehicle_NA_5days_control_NA_87155
Matched control sample: GSM204839: LIVER_vehicle_NA_5days_control_NA_87156
Matched control sample: GSM204861: LIVER_vehicle_NA_5days_control_NA_87215
Matched control sample: GSM204714: LIVER_vehicle_NA_1days_control_NA_87337
Matched control sample: GSM204637: LIVER_vehicle_NA_1days_control_NA_87338
Matched control sample: GSM204689: LIVER_vehicle_NA_1days_control_NA_87339
Matched control sample: GSM204793: LIVER_vehicle_NA_3days_control_NA_87340
Matched control sample: GSM204753: LIVER_vehicle_NA_3days_control_NA_87341
Matched control sample: GSM204778: LIVER_vehicle_NA_3days_control_NA_87342
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, ROFECOXIB, 250mg/kg, 1 days


title: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep2_86915

description:
HybID: 86915
treated sample for experiment (RepID) 6407
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223773: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep3_86866
Replicate experimental sample: GSM223771: LIVER_ROFECOXIB_1550mg/kg_3days_exp6407_rep1_86891
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep3_83319

description:
HybID: 83319
treated sample for experiment (RepID) 5419
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223766: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep2_83320
Replicate experimental sample: GSM223765: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep1_84307
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RIFAMPIN, 99mg/kg, 5 days

value: RIFAMPIN

value: 99 mg/kg

value: CMC

value: 5 days


title: LIVER_SULCONAZOLE_1200mg/kg_3days_exp5760_rep2_84509

description:
HybID: 84509
treated sample for experiment (RepID) 5760
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM224060: LIVER_SULCONAZOLE_1200mg/kg_3days_exp5760_rep3_84508
Replicate experimental sample: GSM224058: LIVER_SULCONAZOLE_1200mg/kg_3days_exp5760_rep1_84510
Matched control sample: GSM204640: LIVER_vehicle_NA_1days_control_NA_84389
Matched control sample: GSM204693: LIVER_vehicle_NA_1days_control_NA_84391
Matched control sample: GSM204751: LIVER_vehicle_NA_3days_control_NA_84394
Matched control sample: GSM204819: LIVER_vehicle_NA_5days_control_NA_84442
Matched control sample: GSM204685: LIVER_vehicle_NA_1days_control_NA_84445
Matched control sample: GSM204787: LIVER_vehicle_NA_3days_control_NA_84446
Matched control sample: GSM204815: LIVER_vehicle_NA_5days_control_NA_84448
Matched control sample: GSM204727: LIVER_vehicle_NA_3days_control_NA_84579
Matched control sample: GSM204865: LIVER_vehicle_NA_5days_control_NA_84667
Matched control sample: GSM204671: LIVER_vehicle_NA_1days_control_NA_84831
Matched control sample: GSM204737: LIVER_vehicle_NA_3days_control_NA_84835
Matched control sample: GSM204812: LIVER_vehicle_NA_5days_control_NA_84836
Matched control sample: GSM204682: LIVER_vehicle_NA_1days_control_NA_84876
Matched control sample: GSM204746: LIVER_vehicle_NA_3days_control_NA_84879
Matched control sample: GSM204803: LIVER_vehicle_NA_5days_control_NA_84881
Matched control sample: GSM204863: LIVER_vehicle_NA_5days_control_NA_84883
Matched control sample: GSM204647: LIVER_vehicle_NA_1days_control_NA_85224
Matched control sample: GSM204752: LIVER_vehicle_NA_3days_control_NA_85227
Matched control sample: GSM204813: LIVER_vehicle_NA_5days_control_NA_85231
Matched control sample: GSM204712: LIVER_vehicle_NA_1days_control_NA_85295
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, SULCONAZOLE, 1200mg/kg, 3 days

value: SULCONAZOLE

value: SUBCUTANEOUS


title: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep1_84307

description:
HybID: 84307
treated sample for experiment (RepID) 5419
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223767: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep3_83319
Replicate experimental sample: GSM223766: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep2_83320
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 6 to 8 weeks


title: LIVER_ROFECOXIB_250mg/kg_1days_exp6545_rep2_87386

description:
HybID: 87386
treated sample for experiment (RepID) 6545
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223776: LIVER_ROFECOXIB_250mg/kg_1days_exp6545_rep3_87384
Replicate experimental sample: GSM223774: LIVER_ROFECOXIB_250mg/kg_1days_exp6545_rep1_87385
Matched control sample: GSM204657: LIVER_vehicle_NA_1days_control_NA_87149
Matched control sample: GSM204719: LIVER_vehicle_NA_1days_control_NA_87150
Matched control sample: GSM204697: LIVER_vehicle_NA_1days_control_NA_87151
Matched control sample: GSM204759: LIVER_vehicle_NA_3days_control_NA_87152
Matched control sample: GSM204796: LIVER_vehicle_NA_3days_control_NA_87153
Matched control sample: GSM204785: LIVER_vehicle_NA_3days_control_NA_87154
Matched control sample: GSM204871: LIVER_vehicle_NA_5days_control_NA_87155
Matched control sample: GSM204839: LIVER_vehicle_NA_5days_control_NA_87156
Matched control sample: GSM204861: LIVER_vehicle_NA_5days_control_NA_87215
Matched control sample: GSM204714: LIVER_vehicle_NA_1days_control_NA_87337
Matched control sample: GSM204637: LIVER_vehicle_NA_1days_control_NA_87338
Matched control sample: GSM204689: LIVER_vehicle_NA_1days_control_NA_87339
Matched control sample: GSM204793: LIVER_vehicle_NA_3days_control_NA_87340
Matched control sample: GSM204753: LIVER_vehicle_NA_3days_control_NA_87341
Matched control sample: GSM204778: LIVER_vehicle_NA_3days_control_NA_87342
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: male


title: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep2_83320

description:
HybID: 83320
treated sample for experiment (RepID) 5419
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223767: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep3_83319
Replicate experimental sample: GSM223765: LIVER_RIFAMPIN_99mg/kg_5days_exp5419_rep1_84307
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: LIVER


title: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep3_83292

description:
HybID: 83292
treated sample for experiment (RepID) 5425
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223763: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep2_83290
Replicate experimental sample: GSM223762: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep1_83291
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RIFAMPIN, 99mg/kg, 3 days


title: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep3_86957

description:
HybID: 86957
treated sample for experiment (RepID) 6440
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223756: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep1_86955
Replicate experimental sample: GSM223757: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep2_86956
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RIFABUTIN, 1500mg/kg, 3 days

value: RIFABUTIN


title: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep1_86863

description:
HybID: 86863
treated sample for experiment (RepID) 6367
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223769: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep2_86864
Replicate experimental sample: GSM223770: LIVER_ROFECOXIB_1550mg/kg_1days_exp6367_rep3_86865
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: ROFECOXIB

value: CORN OIL


title: LIVER_SCH-351591_4.5mg/kg_1days_exp7617_rep3_90574

description:
HybID: 90574
treated sample for experiment (RepID) 7617
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223879: LIVER_SCH-351591_4.5mg/kg_1days_exp7617_rep2_90573
Replicate experimental sample: GSM223878: LIVER_SCH-351591_4.5mg/kg_1days_exp7617_rep1_90575
Matched control sample: GSM204686: LIVER_vehicle_NA_1days_control_NA_88722
Matched control sample: GSM204845: LIVER_vehicle_NA_5days_control_NA_88763
Matched control sample: GSM204696: LIVER_vehicle_NA_1days_control_NA_89140
Matched control sample: GSM204651: LIVER_vehicle_NA_1days_control_NA_89142
Matched control sample: GSM204800: LIVER_vehicle_NA_4days_control_NA_89144
Matched control sample: GSM204797: LIVER_vehicle_NA_4days_control_NA_89146
Matched control sample: GSM204635: LIVER_vehicle_NA_0days_control_NA_89148
Matched control sample: GSM204634: LIVER_vehicle_NA_0days_control_NA_89150
Matched control sample: GSM204722: LIVER_vehicle_NA_30days_control_NA_89231
Matched control sample: GSM204798: LIVER_vehicle_NA_4days_control_NA_89446
Matched control sample: GSM204875: LIVER_vehicle_NA_6days_control_NA_89484
Matched control sample: GSM204876: LIVER_vehicle_NA_6days_control_NA_89516
Matched control sample: GSM204799: LIVER_vehicle_NA_4days_control_NA_89522
Matched control sample: GSM204707: LIVER_vehicle_NA_1days_control_NA_89555
Matched control sample: GSM204670: LIVER_vehicle_NA_1days_control_NA_89557
Matched control sample: GSM204667: LIVER_vehicle_NA_1days_control_NA_89706
Matched control sample: GSM204769: LIVER_vehicle_NA_3days_control_NA_89709
Matched control sample: GSM204824: LIVER_vehicle_NA_5days_control_NA_89713
Matched control sample: GSM204879: LIVER_vehicle_NA_7days_control_NA_89818
Matched control sample: GSM204764: LIVER_vehicle_NA_3days_control_NA_89852
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, SCH-351591, 4.5mg/kg, 1 days

value: 4.5 mg/kg

value: ORAL GAVAGE

value: DAILY


title: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep2_83290

description:
HybID: 83290
treated sample for experiment (RepID) 5425
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223762: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep1_83291
Replicate experimental sample: GSM223764: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep3_83292
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 3 days


title: LIVER_RIFAMPIN_99mg/kg_1days_exp5431_rep1_83288

description:
HybID: 83288
treated sample for experiment (RepID) 5431
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223761: LIVER_RIFAMPIN_99mg/kg_1days_exp5431_rep3_83289
Replicate experimental sample: GSM223760: LIVER_RIFAMPIN_99mg/kg_1days_exp5431_rep2_83318
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RIFAMPIN, 99mg/kg, 1 days

value: 1 days


title: LIVER_RIFAMPIN_99mg/kg_1days_exp5431_rep2_83318

description:
HybID: 83318
treated sample for experiment (RepID) 5431
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223759: LIVER_RIFAMPIN_99mg/kg_1days_exp5431_rep1_83288
Replicate experimental sample: GSM223761: LIVER_RIFAMPIN_99mg/kg_1days_exp5431_rep3_83289
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: RIFAMPIN


title: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep2_86956

description:
HybID: 86956
treated sample for experiment (RepID) 6440
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223756: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep1_86955
Replicate experimental sample: GSM223758: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep3_86957
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep3_86953

description:
HybID: 86953
treated sample for experiment (RepID) 6436
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223754: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep2_86952
Replicate experimental sample: GSM223753: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep1_86954
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RIFABUTIN, 1500mg/kg, 1 days


title: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep1_86955

description:
HybID: 86955
treated sample for experiment (RepID) 6440
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223757: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep2_86956
Replicate experimental sample: GSM223758: LIVER_RIFABUTIN_1500mg/kg_3days_exp6440_rep3_86957
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep2_86005

description:
HybID: 86005
treated sample for experiment (RepID) 6135
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223749: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep3_86006
Replicate experimental sample: GSM223747: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep1_86007
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RALOXIFENE, 650mg/kg, 3 days

value: female

value: RALOXIFENE

value: 650 mg/kg


title: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep1_86010

description:
HybID: 86010
treated sample for experiment (RepID) 6142
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223752: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep3_86008
Replicate experimental sample: GSM223751: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep2_86009
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RALOXIFENE, 650mg/kg, 5 days

value: 5 days


title: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep2_86009

description:
HybID: 86009
treated sample for experiment (RepID) 6142
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223752: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep3_86008
Replicate experimental sample: GSM223750: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep1_86010
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep1_83291

description:
HybID: 83291
treated sample for experiment (RepID) 5425
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223763: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep2_83290
Replicate experimental sample: GSM223764: LIVER_RIFAMPIN_99mg/kg_3days_exp5425_rep3_83292
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 99 mg/kg

value: CMC


title: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep1_86954

description:
HybID: 86954
treated sample for experiment (RepID) 6436
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223754: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep2_86952
Replicate experimental sample: GSM223755: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep3_86953
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 6 to 8 weeks

value: male


title: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep3_86004

description:
HybID: 86004
treated sample for experiment (RepID) 6139
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223741: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep1_86002
Replicate experimental sample: GSM223742: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep2_86102
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RALOXIFENE, 650mg/kg, 1 days

value: LIVER


title: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep1_86007

description:
HybID: 86007
treated sample for experiment (RepID) 6135
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223748: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep2_86005
Replicate experimental sample: GSM223749: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep3_86006
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep3_86006

description:
HybID: 86006
treated sample for experiment (RepID) 6135
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223748: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep2_86005
Replicate experimental sample: GSM223747: LIVER_RALOXIFENE_650mg/kg_3days_exp6135_rep1_86007
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep2_86102

description:
HybID: 86102
treated sample for experiment (RepID) 6139
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223741: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep1_86002
Replicate experimental sample: GSM223743: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep3_86004
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep3_86008

description:
HybID: 86008
treated sample for experiment (RepID) 6142
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223751: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep2_86009
Replicate experimental sample: GSM223750: LIVER_RALOXIFENE_650mg/kg_5days_exp6142_rep1_86010
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep3_84311

description:
HybID: 84311
treated sample for experiment (RepID) 5687
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223720: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep1_84310
Replicate experimental sample: GSM223721: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep2_84312
Matched control sample: GSM204850: LIVER_vehicle_NA_5days_control_NA_83512
Matched control sample: GSM204828: LIVER_vehicle_NA_5days_control_NA_83673
Matched control sample: GSM204674: LIVER_vehicle_NA_1days_control_NA_83735
Matched control sample: GSM204784: LIVER_vehicle_NA_3days_control_NA_83737
Matched control sample: GSM204724: LIVER_vehicle_NA_3days_control_NA_83739
Matched control sample: GSM204843: LIVER_vehicle_NA_5days_control_NA_83741
Matched control sample: GSM204700: LIVER_vehicle_NA_1days_control_NA_83831
Matched control sample: GSM204660: LIVER_vehicle_NA_1days_control_NA_83833
Matched control sample: GSM204766: LIVER_vehicle_NA_3days_control_NA_83835
Matched control sample: GSM204844: LIVER_vehicle_NA_5days_control_NA_83838
Matched control sample: GSM204659: LIVER_vehicle_NA_1days_control_NA_83978
Matched control sample: GSM204781: LIVER_vehicle_NA_3days_control_NA_83980
Matched control sample: GSM204741: LIVER_vehicle_NA_3days_control_NA_83982
Matched control sample: GSM204806: LIVER_vehicle_NA_5days_control_NA_83983
Matched control sample: GSM204852: LIVER_vehicle_NA_5days_control_NA_83985
Matched control sample: GSM204873: LIVER_vehicle_NA_5days_control_NA_84149
Matched control sample: GSM204648: LIVER_vehicle_NA_1days_control_NA_84194
Matched control sample: GSM204703: LIVER_vehicle_NA_1days_control_NA_84196
Matched control sample: GSM204758: LIVER_vehicle_NA_3days_control_NA_84198
Matched control sample: GSM204836: LIVER_vehicle_NA_5days_control_NA_84201
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RABEPRAZOLE, 1024mg/kg, 3 days

value: RABEPRAZOLE

value: WATER


title: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep2_84312

description:
HybID: 84312
treated sample for experiment (RepID) 5687
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223720: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep1_84310
Replicate experimental sample: GSM223722: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep3_84311
Matched control sample: GSM204850: LIVER_vehicle_NA_5days_control_NA_83512
Matched control sample: GSM204828: LIVER_vehicle_NA_5days_control_NA_83673
Matched control sample: GSM204674: LIVER_vehicle_NA_1days_control_NA_83735
Matched control sample: GSM204784: LIVER_vehicle_NA_3days_control_NA_83737
Matched control sample: GSM204724: LIVER_vehicle_NA_3days_control_NA_83739
Matched control sample: GSM204843: LIVER_vehicle_NA_5days_control_NA_83741
Matched control sample: GSM204700: LIVER_vehicle_NA_1days_control_NA_83831
Matched control sample: GSM204660: LIVER_vehicle_NA_1days_control_NA_83833
Matched control sample: GSM204766: LIVER_vehicle_NA_3days_control_NA_83835
Matched control sample: GSM204844: LIVER_vehicle_NA_5days_control_NA_83838
Matched control sample: GSM204659: LIVER_vehicle_NA_1days_control_NA_83978
Matched control sample: GSM204781: LIVER_vehicle_NA_3days_control_NA_83980
Matched control sample: GSM204741: LIVER_vehicle_NA_3days_control_NA_83982
Matched control sample: GSM204806: LIVER_vehicle_NA_5days_control_NA_83983
Matched control sample: GSM204852: LIVER_vehicle_NA_5days_control_NA_83985
Matched control sample: GSM204873: LIVER_vehicle_NA_5days_control_NA_84149
Matched control sample: GSM204648: LIVER_vehicle_NA_1days_control_NA_84194
Matched control sample: GSM204703: LIVER_vehicle_NA_1days_control_NA_84196
Matched control sample: GSM204758: LIVER_vehicle_NA_3days_control_NA_84198
Matched control sample: GSM204836: LIVER_vehicle_NA_5days_control_NA_84201
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep1_86002

description:
HybID: 86002
treated sample for experiment (RepID) 6139
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223743: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep3_86004
Replicate experimental sample: GSM223742: LIVER_RALOXIFENE_650mg/kg_1days_exp6139_rep2_86102
Matched control sample: GSM223153: LIVER_vehicle_NA_3days_control_NA_85363
Matched control sample: GSM223160: LIVER_vehicle_NA_3days_control_NA_85365
Matched control sample: GSM223142: LIVER_vehicle_NA_1days_control_NA_85719
Matched control sample: GSM223172: LIVER_vehicle_NA_5days_control_NA_85728
Matched control sample: GSM223161: LIVER_vehicle_NA_3days_control_NA_85730
Matched control sample: GSM223154: LIVER_vehicle_NA_3days_control_NA_85748
Matched control sample: GSM223181: LIVER_vehicle_NA_5days_control_NA_85751
Matched control sample: GSM223155: LIVER_vehicle_NA_3days_control_NA_85770
Matched control sample: GSM223134: LIVER_vehicle_NA_1days_control_NA_85804
Matched control sample: GSM223162: LIVER_vehicle_NA_3days_control_NA_85805
Matched control sample: GSM223182: LIVER_vehicle_NA_5days_control_NA_85806
Matched control sample: GSM223173: LIVER_vehicle_NA_5days_control_NA_85808
Matched control sample: GSM223135: LIVER_vehicle_NA_1days_control_NA_85872
Matched control sample: GSM223143: LIVER_vehicle_NA_1days_control_NA_85874
Matched control sample: GSM223136: LIVER_vehicle_NA_1days_control_NA_85993
Matched control sample: GSM223144: LIVER_vehicle_NA_1days_control_NA_85995
Matched control sample: GSM223156: LIVER_vehicle_NA_3days_control_NA_85996
Matched control sample: GSM223163: LIVER_vehicle_NA_3days_control_NA_85998
Matched control sample: GSM223174: LIVER_vehicle_NA_5days_control_NA_85999
Matched control sample: GSM223183: LIVER_vehicle_NA_5days_control_NA_86101
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CORN OIL


title: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep2_86952

description:
HybID: 86952
treated sample for experiment (RepID) 6436
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223755: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep3_86953
Replicate experimental sample: GSM223753: LIVER_RIFABUTIN_1500mg/kg_1days_exp6436_rep1_86954
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: RIFABUTIN

value: ORAL GAVAGE


title: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep1_84310

description:
HybID: 84310
treated sample for experiment (RepID) 5687
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223722: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep3_84311
Replicate experimental sample: GSM223721: LIVER_RABEPRAZOLE_1024mg/kg_3days_exp5687_rep2_84312
Matched control sample: GSM204850: LIVER_vehicle_NA_5days_control_NA_83512
Matched control sample: GSM204828: LIVER_vehicle_NA_5days_control_NA_83673
Matched control sample: GSM204674: LIVER_vehicle_NA_1days_control_NA_83735
Matched control sample: GSM204784: LIVER_vehicle_NA_3days_control_NA_83737
Matched control sample: GSM204724: LIVER_vehicle_NA_3days_control_NA_83739
Matched control sample: GSM204843: LIVER_vehicle_NA_5days_control_NA_83741
Matched control sample: GSM204700: LIVER_vehicle_NA_1days_control_NA_83831
Matched control sample: GSM204660: LIVER_vehicle_NA_1days_control_NA_83833
Matched control sample: GSM204766: LIVER_vehicle_NA_3days_control_NA_83835
Matched control sample: GSM204844: LIVER_vehicle_NA_5days_control_NA_83838
Matched control sample: GSM204659: LIVER_vehicle_NA_1days_control_NA_83978
Matched control sample: GSM204781: LIVER_vehicle_NA_3days_control_NA_83980
Matched control sample: GSM204741: LIVER_vehicle_NA_3days_control_NA_83982
Matched control sample: GSM204806: LIVER_vehicle_NA_5days_control_NA_83983
Matched control sample: GSM204852: LIVER_vehicle_NA_5days_control_NA_83985
Matched control sample: GSM204873: LIVER_vehicle_NA_5days_control_NA_84149
Matched control sample: GSM204648: LIVER_vehicle_NA_1days_control_NA_84194
Matched control sample: GSM204703: LIVER_vehicle_NA_1days_control_NA_84196
Matched control sample: GSM204758: LIVER_vehicle_NA_3days_control_NA_84198
Matched control sample: GSM204836: LIVER_vehicle_NA_5days_control_NA_84201
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: DAILY

value: 3 days


title: LIVER_PYROGALLOL_1000mg/kg_5days_exp5632_rep1_84151

description:
HybID: 84151
treated sample for experiment (RepID) 5632
replicate 1 of 2
Experimental sample
Replicate experimental sample: GSM223716: LIVER_PYROGALLOL_1000mg/kg_5days_exp5632_rep2_84152
Matched control sample: GSM204850: LIVER_vehicle_NA_5days_control_NA_83512
Matched control sample: GSM204828: LIVER_vehicle_NA_5days_control_NA_83673
Matched control sample: GSM204674: LIVER_vehicle_NA_1days_control_NA_83735
Matched control sample: GSM204784: LIVER_vehicle_NA_3days_control_NA_83737
Matched control sample: GSM204724: LIVER_vehicle_NA_3days_control_NA_83739
Matched control sample: GSM204843: LIVER_vehicle_NA_5days_control_NA_83741
Matched control sample: GSM204700: LIVER_vehicle_NA_1days_control_NA_83831
Matched control sample: GSM204660: LIVER_vehicle_NA_1days_control_NA_83833
Matched control sample: GSM204766: LIVER_vehicle_NA_3days_control_NA_83835
Matched control sample: GSM204844: LIVER_vehicle_NA_5days_control_NA_83838
Matched control sample: GSM204659: LIVER_vehicle_NA_1days_control_NA_83978
Matched control sample: GSM204781: LIVER_vehicle_NA_3days_control_NA_83980
Matched control sample: GSM204741: LIVER_vehicle_NA_3days_control_NA_83982
Matched control sample: GSM204806: LIVER_vehicle_NA_5days_control_NA_83983
Matched control sample: GSM204852: LIVER_vehicle_NA_5days_control_NA_83985
Matched control sample: GSM204873: LIVER_vehicle_NA_5days_control_NA_84149
Matched control sample: GSM204648: LIVER_vehicle_NA_1days_control_NA_84194
Matched control sample: GSM204703: LIVER_vehicle_NA_1days_control_NA_84196
Matched control sample: GSM204758: LIVER_vehicle_NA_3days_control_NA_84198
Matched control sample: GSM204836: LIVER_vehicle_NA_5days_control_NA_84201
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PYROGALLOL, 1000mg/kg, 5 days

value: PYROGALLOL


title: LIVER_PYROGALLOL_1000mg/kg_5days_exp5632_rep2_84152

description:
HybID: 84152
treated sample for experiment (RepID) 5632
replicate 2 of 2
Experimental sample
Replicate experimental sample: GSM223715: LIVER_PYROGALLOL_1000mg/kg_5days_exp5632_rep1_84151
Matched control sample: GSM204850: LIVER_vehicle_NA_5days_control_NA_83512
Matched control sample: GSM204828: LIVER_vehicle_NA_5days_control_NA_83673
Matched control sample: GSM204674: LIVER_vehicle_NA_1days_control_NA_83735
Matched control sample: GSM204784: LIVER_vehicle_NA_3days_control_NA_83737
Matched control sample: GSM204724: LIVER_vehicle_NA_3days_control_NA_83739
Matched control sample: GSM204843: LIVER_vehicle_NA_5days_control_NA_83741
Matched control sample: GSM204700: LIVER_vehicle_NA_1days_control_NA_83831
Matched control sample: GSM204660: LIVER_vehicle_NA_1days_control_NA_83833
Matched control sample: GSM204766: LIVER_vehicle_NA_3days_control_NA_83835
Matched control sample: GSM204844: LIVER_vehicle_NA_5days_control_NA_83838
Matched control sample: GSM204659: LIVER_vehicle_NA_1days_control_NA_83978
Matched control sample: GSM204781: LIVER_vehicle_NA_3days_control_NA_83980
Matched control sample: GSM204741: LIVER_vehicle_NA_3days_control_NA_83982
Matched control sample: GSM204806: LIVER_vehicle_NA_5days_control_NA_83983
Matched control sample: GSM204852: LIVER_vehicle_NA_5days_control_NA_83985
Matched control sample: GSM204873: LIVER_vehicle_NA_5days_control_NA_84149
Matched control sample: GSM204648: LIVER_vehicle_NA_1days_control_NA_84194
Matched control sample: GSM204703: LIVER_vehicle_NA_1days_control_NA_84196
Matched control sample: GSM204758: LIVER_vehicle_NA_3days_control_NA_84198
Matched control sample: GSM204836: LIVER_vehicle_NA_5days_control_NA_84201
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_RABEPRAZOLE_1024mg/kg_1days_exp5697_rep3_84308

description:
HybID: 84308
treated sample for experiment (RepID) 5697
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223718: LIVER_RABEPRAZOLE_1024mg/kg_1days_exp5697_rep2_84309
Replicate experimental sample: GSM223717: LIVER_RABEPRAZOLE_1024mg/kg_1days_exp5697_rep1_84572
Matched control sample: GSM204850: LIVER_vehicle_NA_5days_control_NA_83512
Matched control sample: GSM204828: LIVER_vehicle_NA_5days_control_NA_83673
Matched control sample: GSM204674: LIVER_vehicle_NA_1days_control_NA_83735
Matched control sample: GSM204784: LIVER_vehicle_NA_3days_control_NA_83737
Matched control sample: GSM204724: LIVER_vehicle_NA_3days_control_NA_83739
Matched control sample: GSM204843: LIVER_vehicle_NA_5days_control_NA_83741
Matched control sample: GSM204700: LIVER_vehicle_NA_1days_control_NA_83831
Matched control sample: GSM204660: LIVER_vehicle_NA_1days_control_NA_83833
Matched control sample: GSM204766: LIVER_vehicle_NA_3days_control_NA_83835
Matched control sample: GSM204844: LIVER_vehicle_NA_5days_control_NA_83838
Matched control sample: GSM204659: LIVER_vehicle_NA_1days_control_NA_83978
Matched control sample: GSM204781: LIVER_vehicle_NA_3days_control_NA_83980
Matched control sample: GSM204741: LIVER_vehicle_NA_3days_control_NA_83982
Matched control sample: GSM204806: LIVER_vehicle_NA_5days_control_NA_83983
Matched control sample: GSM204852: LIVER_vehicle_NA_5days_control_NA_83985
Matched control sample: GSM204873: LIVER_vehicle_NA_5days_control_NA_84149
Matched control sample: GSM204648: LIVER_vehicle_NA_1days_control_NA_84194
Matched control sample: GSM204703: LIVER_vehicle_NA_1days_control_NA_84196
Matched control sample: GSM204758: LIVER_vehicle_NA_3days_control_NA_84198
Matched control sample: GSM204836: LIVER_vehicle_NA_5days_control_NA_84201
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, RABEPRAZOLE, 1024mg/kg, 1 days

value: 1 days


title: LIVER_PYROGALLOL_1000mg/kg_1days_exp5628_rep3_84120

description:
HybID: 84120
treated sample for experiment (RepID) 5628
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223710: LIVER_PYROGALLOL_1000mg/kg_1days_exp5628_rep2_84119
Replicate experimental sample: GSM223709: LIVER_PYROGALLOL_1000mg/kg_1days_exp5628_rep1_84121
Matched control sample: GSM204850: LIVER_vehicle_NA_5days_control_NA_83512
Matched control sample: GSM204828: LIVER_vehicle_NA_5days_control_NA_83673
Matched control sample: GSM204674: LIVER_vehicle_NA_1days_control_NA_83735
Matched control sample: GSM204784: LIVER_vehicle_NA_3days_control_NA_83737
Matched control sample: GSM204724: LIVER_vehicle_NA_3days_control_NA_83739
Matched control sample: GSM204843: LIVER_vehicle_NA_5days_control_NA_83741
Matched control sample: GSM204700: LIVER_vehicle_NA_1days_control_NA_83831
Matched control sample: GSM204660: LIVER_vehicle_NA_1days_control_NA_83833
Matched control sample: GSM204766: LIVER_vehicle_NA_3days_control_NA_83835
Matched control sample: GSM204844: LIVER_vehicle_NA_5days_control_NA_83838
Matched control sample: GSM204659: LIVER_vehicle_NA_1days_control_NA_83978
Matched control sample: GSM204781: LIVER_vehicle_NA_3days_control_NA_83980
Matched control sample: GSM204741: LIVER_vehicle_NA_3days_control_NA_83982
Matched control sample: GSM204806: LIVER_vehicle_NA_5days_control_NA_83983
Matched control sample: GSM204852: LIVER_vehicle_NA_5days_control_NA_83985
Matched control sample: GSM204873: LIVER_vehicle_NA_5days_control_NA_84149
Matched control sample: GSM204648: LIVER_vehicle_NA_1days_control_NA_84194
Matched control sample: GSM204703: LIVER_vehicle_NA_1days_control_NA_84196
Matched control sample: GSM204758: LIVER_vehicle_NA_3days_control_NA_84198
Matched control sample: GSM204836: LIVER_vehicle_NA_5days_control_NA_84201
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, PYROGALLOL, 1000mg/kg, 1 days


title: LIVER_PYROGALLOL_1000mg/kg_1days_exp5628_rep2_84119

description:
HybID: 84119
treated sample for experiment (RepID) 5628
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223711: LIVER_PYROGALLOL_1000mg/kg_1days_exp5628_rep3_84120
Replicate experimental sample: GSM223709: LIVER_PYROGALLOL_1000mg/kg_1days_exp5628_rep1_84121
Matched control sample: GSM204850: LIVER_vehicle_NA_5days_control_NA_83512
Matched control sample: GSM204828: LIVER_vehicle_NA_5days_control_NA_83673
Matched control sample: GSM204674: LIVER_vehicle_NA_1days_control_NA_83735
Matched control sample: GSM204784: LIVER_vehicle_NA_3days_control_NA_83737
Matched control sample: GSM204724: LIVER_vehicle_NA_3days_control_NA_83739
Matched control sample: GSM204843: LIVER_vehicle_NA_5days_control_NA_83741
Matched control sample: GSM204700: LIVER_vehicle_NA_1days_control_NA_83831
Matched control sample: GSM204660: LIVER_vehicle_NA_1days_control_NA_83833
Matched control sample: GSM204766: LIVER_vehicle_NA_3days_control_NA_83835
Matched control sample: GSM204844: LIVER_vehicle_NA_5days_control_NA_83838
Matched control sample: GSM204659: LIVER_vehicle_NA_1days_control_NA_83978
Matched control sample: GSM204781: LIVER_vehicle_NA_3days_control_NA_83980
Matched control sample: GSM204741: LIVER_vehicle_NA_3days_control_NA_83982
Matched control sample: GSM204806: LIVER_vehicle_NA_5days_control_NA_83983
Matched control sample: GSM204852: LIVER_vehicle_NA_5days_control_NA_83985
Matched control sample: GSM204873: LIVER_vehicle_NA_5days_control_NA_84149
Matched control sample: GSM204648: LIVER_vehicle_NA_1days_control_NA_84194
Matched control sample: GSM204703: LIVER_vehicle_NA_1days_control_NA_84196
Matched control sample: GSM204758: LIVER_vehicle_NA_3days_control_NA_84198
Matched control sample: GSM204836: LIVER_vehicle_NA_5days_control_NA_84201
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf