title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep2_12846

description:
HybID: 12846
treated sample for experiment (RepID) 2682
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221095: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep1_12845
Replicate experimental sample: GSM221097: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep3_12847
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBON TETRACHLORIDE, 400mg/kg, 7 days

value: CARBON TETRACHLORIDE

value: 400 mg/kg

value: CORN OIL

value: 7 days


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep1_12845

status: Public on Mar 28 2008

type: RNA

city: Mountain View

first: Jeremy

last: Gollub

state: CA

address: 325 E. Middlefield Rd.

country: USA

institute: Iconix Biosciences

description:
HybID: 12845
treated sample for experiment (RepID) 2682
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221096: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep2_12846
Replicate experimental sample: GSM221097: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep3_12847
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

hyb_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. 12.5 ug of cRNA sample was fragmented in 40 mM Tris-acetate (TrisOAc) pH7.9, 100 mM KOAc and 31.5 mM MgOAc at 94oC for 20 min. This typically resulted in a fragmented cRNA with a size range between 100 to 200 bases. 10 ug of the fragmented cRNA was used for hybridization of each Rat-Uniset I (RU1) Expression BioArray (Amersham Biosciences, Piscataway, NJ) in a volume of 260 ul, containing 78 ul of CodeLink Hyb buffer component A and 130 ul of CodeLink Hyb buffer component B (Amersham Biosciences, Piscataway, NJ). The hybridization solution was denatured at 90oC for 5 min then chilled on ice. The sample was vortexed at maximum speed for 5 sec and centrifuged at maximum speed for 5 min before 250 ul of the solution was injected into the inlet port of the flex-hybridization chamber, and placed in a CodeLink 12-slide shaker tray. The hybridization ports were sealed with 1 cm sealing strips (Amersham Biosciences, Piscataway, NJ), and the shaker tray(s) containing the slides was loaded into a New Brunswick Innova 4080 shaking incubator, with the hybridization chambers facing up. Slides were incubated for 20 hr at 37oC, while shaking at 300 rpm. The 12-slide shaker tray was removed from the shaker, and the hybridization chamber removed from each slide. Each slide was placed into the BioArray Rack of the Parallel Processing Tool (Amersham Biosciences, Piscataway, NJ) and incubated with 0.75x TNT (0.075 M Tris-HCl, pH7.6, 0.1125 M NaCl, 0.0375 % Tween-20) at 46oC for 1hr. The BioArray Rack was moved from the TNT containing reservoir to the small reagent reservoir containing 1:500 dilution of streptavidin-Alexa 647 (Molecular Probes, Eugene, OR). The signal was developed for 30 min at room temperature, before the reaction was stopped and slides were washed four times for 5 min each in TNT buffer (0.1 M Tris-HCl, pH7.6, 0.15 M NaCl, 0.05% Tween-20) using a large reagent reservoir. The slides were rinsed in ddH2O with 0.05% Tween-20 twice for 5 sec each before they were dried by centrifugation with a Qiagen Sigma 4-15C centrifuge (Valencia, CA) using a swinging bucket rotor (2x96) for exactly 3 min at 2000rpm (acceleration at position 9 and deceleration at position 9). The dried slides were stored in light protective slide boxes at room temperature prior to scanning.

scan_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The Axon GenePix Scanner (Axon Instrument, Union City, CA) was calibrated using the Calibration Slide supplied by Axon Instrument with GenePix 4.0 at 635 nm using the Calibration System. After calibration of the scanner, all processed slides were scanned with the laser set to 635 nm, the photomultiplier tube (PMT) voltage to 600 and the scan resolution to 10 microns. For consistency all slides were scanned the same day of color development, within an hour after dry spinning them and the data was analyzed using the CodeLink Expression Analysis Software version 2.2.25 (Amersham Biosciences, Piscataway, NJ).

data_processing: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44, supplemental methods.  Prior to statistical computation, the spot reading data was normalized. For this purpose a new nonlinear normalization procedure, similar to the centralization approach reported in the literature (Zien et al., 2001) was developed for the CodeLink array platform. The normalization procedure uses proprietary algorithm that assumes that in general, for an array with many probes, the majority of the signal represents genes that have unchanged expressions compared to controls, with the extreme values representing the true biology of the process and not some artifact due to measurement noise. The algorithm does not make the assumption that the true mRNA abundance being measured is linearly proportional to the spot reading signal or any assumption about the error distribution of such signals or their differential. Rather, the assumption of unchanged signals representing the bulk of the signal measurements is used to center a nonlinear curve fit to a reference template. This reference template is constructed for a large set of time matched, same tissue and same vehicle, control arrays, computing a median log signal for each probe. The replicate size of this set is adequate to ensure very small random error in the ensemble signal level for each reference probe. The curve fit corrects for some array processing problems, such as partial signal saturation, and improves the overall quality of the data compared to simple linear normalization methods. Essentially the curve tracks the mode of the signal distribution for sets of genes against the expected value for that set.

label: biotin

molecule: polyA RNA

organism: Rattus norvegicus

label_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The methods used for cRNA preparation (cDNA synthesis, cRNA preparation, and cRNA purification) are essentially as described in the CodeLink™ manual v2.1 as supplied by Amersham Biosciences (Piscataway, NJ) using the Qiagen BioRobot 9604 (Valencia, CA). cDNA synthesis, cRNA preparation, and cRNA purification were completely processed in a 96-well format using the automated Qiagen BioRobot 9604 procedure. 0.6 – 20 ìg of enriched RNA from different tissue sources were added to a reaction mixture in a final volume of 12 ìl, containing bacterial control RNA (1.5pg FixA, 5pgYjeK, 5pg AraB, 15pg EntF, 50pg FixB, 150pg HisB, 500pg LeuB, 1500pg gnd) and 1.0 ìl of 100 pmol ìl-1 T7-(dT)24 oligonucleotide primer (Proligo, Boulder, CO). The T7-(dT)24 oligonucleotide primer used, is an HPLC purified 63-mer with the sequence : 5'-GGCCAGTGAATTGTAATACGACTCACTATAGGGAGGCGGTTTTTTTTTTTTTTTTTTTTTTTT-3'. The mixture was incubated for 10 min at 70oC and chilled on ice. On ice, 4 ul of 5x first-strand buffer, 2 ul 0.1 M DTT, 1 ul of 10 mM dNTP mix and 1 ul Superscript™II RNaseH-reverse transcriptase (200 U/ul) were added to the mixture to make a final volume of 20 ul. The mixture was incubated for 1 hr at 37oC. Second-strand cDNA was synthesized in a volume of 150 ul, containing 92 ul nuclease-free water, 30 ul of 5x second-strand buffer, 3 ul of 10 mM dNTP mix, 4 ul of Escherichia coli DNA polymerase I (10 U/ìl) and 1 ul of RNase H (2 U/ul) for 2 hr at 16oC. The cDNA was purified using a Qiagen QIAquick purification kit, and completely dried down using a Speed-Vac concentrator (45oC) for 2 hr. The dried product was resuspended in IVT reaction mix containing 3.0 ul of nuclease-free water, 4.0 ul 10x reaction buffer, 4.0 ul 75 mM ATP, 4.0 ul 75 mM GTP, 3.0 ul 75 mM CTP, 3.0 ul 75 mM UTP, 7.5 ul 10 mM Biotin 11-CTP, 7.5 ul 10 mM Biotin 11-UTP and 4.0 ul enzyme mix. The reaction mix was incubated for 14 hr at 37oC using an MJ Research 96-well PTC-200 Thermal Cycler (MJ Research, Waltham, MA), before the cRNA was purified using a Qiagen RNeasy® kit. The resulting cRNA yield was quantified using the 96-well ìQuan Universal Microplate Spectrophotometer Model MQX200 (BIO-TEK Instruments Inc., Winooski, VT) at a wavelength of 260 nm. Conformance of the cRNA sample to historical size distributions (the bulk of the cRNA product should be between 500 and 3,000 bases in size) was confirmed using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA). Samples not near the historical norm were reprocessed starting from tissue or RNA.

growth_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Sprague-Dawley (Crl:CD®(SD)|GS BR) rats (aged 6-8 weeks and weighing 200 - 260 g), were purchased from Charles River Laboratories (Wilmington, MA). They were housed in plastic cages for 1 week for acclimation to the laboratory environment of a ventilated room (temperature, 22oC ±3oC; humidity, 30 - 70%; light/dark cycle, 12 h d-1, 6:00am - 6:00pm) until use. Certified Rodent Diet #5002 (PMI Feeds Inc.) and chlorinated tap water was available ad libitum.

extract_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. Following sacrifice, 6 mm disposable biopsy punches (#REF 33-36 Miltex, Inc. Bethpage, NY) were used to obtain tissue samples of approximately 100 mg. Samples were placed in cryogenic tubes and snap frozen. Poly A(+)-RNA from tissue samples was isolated using the MagNA Pure LC robot (Roche, Basel, Switzerland) in combination with the MagNA Pure LC mRNA Isolation kit I and II (Roche, Basel, Switzerland) for cells (see supplemental methods section) and tissues, respectively. Tissue samples were completely homogenized directly from ~100 mg punches stored on dry ice prior to application of lysis buffer to a final concentration of 65 mg tissue per ml of buffer. After complete homogenization, using disposable Omni Tip Disposable Generator Probes (Omni Inc, Warrenton, VA) and before loading of the samples into the 32-well MagNA Pure plate, the samples were drawn up 5-6 times through a 20-gauge needle attached to a 3-ml syringe to ensure any tissue pieces or clumps were removed from the lysate prior to robotic processing. Tissue sample processing was performed in duplicate wells (loading 150 ul of homogenized sample to each well) of the MagNA Pure LC, which is programmed to extract mRNA using the oligo-dT selection method into a final elution volume of 100 ul. Poly A(+) RNA sample concentration was performed manually using a standard ethanol precipitation protocol in the presence of glycogen (50 ug/ml). After precipitation the final purified RNA sample was resuspended in 7 ìl DEPC-H2O and quantified using a Ribogreen high-range assay (Molecular Probes) on the Wallac Victor2 Fluorometer (Perkin-Elmer, Fremont, CA). Additionally, the integrity of each RNA sample was determined, by comparison to historical standards (no gross degradation should be visible as suggested by clear 18S and 28S peaks on top of a hump of complex RNA, with lower amounts of RNA below 18S than under and above the 18S peak), using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA) in combination with the RNA 6000 Nano Lab Chip kit (Agilent Technologies).

treatment_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Compounds were administered via the route of administration (ROA) that corresponds to that by which humans receive the drug. Compounds were typically administered orally (PO) (83%), intravenously (IV) (9.4%), subcutaneously (SC) (5.7%), or intraperitoneally (IP) (2%). If the compound is a toxicant or a biochemical standard, it was administered orally. For oral dosing, the vehicle choice largely depends on the solubility of the compound in water. Water-soluble compounds were administered in water. Insoluble compounds are administered in either corn oil or 0.5% carboxymethylcellulose (CMC) using the best literature recommendation as a guide. IV administered compounds were usually dissolved in saline and SC administered compounds in corn oil. The highest dose the rats receive is the Maximum Tolerated Dose (MTD). The dosing of animals was staggered based on intended harvest order to ensure that sacrifice occurred within 30 minutes of the recorded time point. Dosing frequency was as described in Sample_characteristics for the particular treatment.

tag: Sprague-Dawley

tag: age

value: 6 to 8 weeks

tag: sex

value: male

tag: tissue

value: LIVER

tag: treatment compound

tag: dose

tag: solvent

tag: administration route

value: ORAL GAVAGE

tag: frequency of dosing

value: DAILY

tag: treatment duration

tag: experiment date


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep3_12847

description:
HybID: 12847
treated sample for experiment (RepID) 2682
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221095: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep1_12845
Replicate experimental sample: GSM221096: LIVER_CARBON_TETRACHLORIDE_400mg/kg_7days_exp2682_rep2_12846
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep2_19188

description:
HybID: 19188
treated sample for experiment (RepID) 4375
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221768: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep1_19186
Replicate experimental sample: GSM221770: LIVER_DOXYCYCLINE_1000mg/kg_3days_exp4375_rep3_19187
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DOXYCYCLINE, 1000mg/kg, 3 days

value: DOXYCYCLINE

value: WATER

value: 3 days


title: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep2_15367

description:
HybID: 15367
treated sample for experiment (RepID) 3458
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221100: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep3_15366
Replicate experimental sample: GSM221098: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep1_15752
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 14mg/kg, .25 days

value: CARBOPLATIN

value: 14 mg/kg

value: SALINE

value: INTRAVENOUS

value: .25 days


title: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep1_15465

description:
HybID: 15465
treated sample for experiment (RepID) 3472
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221103: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep3_15463
Replicate experimental sample: GSM221102: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep2_15464
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBOPLATIN, 14mg/kg, 1 days

value: 1 days


title: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep2_19266

description:
HybID: 19266
treated sample for experiment (RepID) 4338
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221725: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep3_19217
Replicate experimental sample: GSM221723: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep1_81596
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DISULFIRAM, 100mg/kg, 1 days

value: DISULFIRAM

value: 100 mg/kg


title: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep3_15366

description:
HybID: 15366
treated sample for experiment (RepID) 3458
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221099: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep2_15367
Replicate experimental sample: GSM221098: LIVER_CARBOPLATIN_14mg/kg_.25days_exp3458_rep1_15752
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep2_15464

description:
HybID: 15464
treated sample for experiment (RepID) 3472
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221103: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep3_15463
Replicate experimental sample: GSM221101: LIVER_CARBOPLATIN_14mg/kg_1days_exp3472_rep1_15465
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep3_19217

description:
HybID: 19217
treated sample for experiment (RepID) 4338
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221724: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep2_19266
Replicate experimental sample: GSM221723: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep1_81596
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep3_15560

description:
HybID: 15560
treated sample for experiment (RepID) 2847
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221089: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep1_12841
Replicate experimental sample: GSM221090: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep2_13114
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBON TETRACHLORIDE, 400mg/kg, 1 days

value: CARBON TETRACHLORIDE

value: 400 mg/kg

value: CORN OIL


title: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep3_19263

description:
HybID: 19263
treated sample for experiment (RepID) 4341
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221721: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep2_19216
Replicate experimental sample: GSM221720: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep1_81595
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DISULFIRAM, 100mg/kg, .25 days

value: 6 to 8 weeks

value: male

value: LIVER


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep1_12842

description:
HybID: 12842
treated sample for experiment (RepID) 2681
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221094: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep3_12843
Replicate experimental sample: GSM221093: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep2_12844
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBON TETRACHLORIDE, 400mg/kg, 3 days

value: ORAL GAVAGE

value: DAILY


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep2_12844

description:
HybID: 12844
treated sample for experiment (RepID) 2681
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221092: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep1_12842
Replicate experimental sample: GSM221094: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep3_12843
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 3 days


title: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep1_81596

description:
HybID: 81596
treated sample for experiment (RepID) 4338
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221725: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep3_19217
Replicate experimental sample: GSM221724: LIVER_DISULFIRAM_100mg/kg_1days_exp4338_rep2_19266
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: WATER


title: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep3_81554

description:
HybID: 81554
treated sample for experiment (RepID) 4388
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221765: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep1_19257
Replicate experimental sample: GSM221766: LIVER_DOXYCYCLINE_1000mg/kg_1days_exp4388_rep2_81027
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DOXYCYCLINE, 1000mg/kg, 1 days

value: DOXYCYCLINE


title: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep1_81595

description:
HybID: 81595
treated sample for experiment (RepID) 4341
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221721: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep2_19216
Replicate experimental sample: GSM221722: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep3_19263
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DOXORUBICIN_3mg/kg_5days_exp3018_rep1_15935

description:
HybID: 15935
treated sample for experiment (RepID) 3018
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221763: LIVER_DOXORUBICIN_3mg/kg_5days_exp3018_rep2_13918
Replicate experimental sample: GSM221764: LIVER_DOXORUBICIN_3mg/kg_5days_exp3018_rep3_15934
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DOXORUBICIN, 3mg/kg, 5 days

value: DOXORUBICIN

value: 3 mg/kg

value: SALINE

value: 5 days


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep3_12843

description:
HybID: 12843
treated sample for experiment (RepID) 2681
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221092: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep1_12842
Replicate experimental sample: GSM221093: LIVER_CARBON_TETRACHLORIDE_400mg/kg_3days_exp2681_rep2_12844
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep1_14766

description:
HybID: 14766
treated sample for experiment (RepID) 2739
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221087: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep2_12839
Replicate experimental sample: GSM221088: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep3_12840
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBON TETRACHLORIDE, 400mg/kg, .25 days

value: .25 days


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep1_12841

description:
HybID: 12841
treated sample for experiment (RepID) 2847
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221090: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep2_13114
Replicate experimental sample: GSM221091: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep3_15560
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 1 days


title: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep2_19216

description:
HybID: 19216
treated sample for experiment (RepID) 4341
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221722: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep3_19263
Replicate experimental sample: GSM221720: LIVER_DISULFIRAM_100mg/kg_.25days_exp4341_rep1_81595
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: DISULFIRAM

value: 100 mg/kg


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep2_12839

description:
HybID: 12839
treated sample for experiment (RepID) 2739
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221088: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep3_12840
Replicate experimental sample: GSM221086: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep1_14766
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CARBON TETRACHLORIDE

value: 400 mg/kg

value: CORN OIL


title: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep2_19074

description:
HybID: 19074
treated sample for experiment (RepID) 4322
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221634: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep3_19164
Replicate experimental sample: GSM221632: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep1_81456
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DICUMAROL, 13mg/kg, 3 days

value: 6 to 8 weeks

value: male

value: LIVER

value: DICUMAROL

value: 13 mg/kg


title: LIVER_DICUMAROL_5mg/kg_1days_exp4279_rep1_18994

description:
HybID: 18994
treated sample for experiment (RepID) 4279
replicate 1 of 2
Experimental sample
Replicate experimental sample: GSM221639: LIVER_DICUMAROL_5mg/kg_1days_exp4279_rep2_18992
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DICUMAROL, 5mg/kg, 1 days

value: 5 mg/kg

value: ORAL GAVAGE

value: DAILY


title: LIVER_DICUMAROL_5mg/kg_1days_exp4279_rep2_18992

description:
HybID: 18992
treated sample for experiment (RepID) 4279
replicate 2 of 2
Experimental sample
Replicate experimental sample: GSM221638: LIVER_DICUMAROL_5mg/kg_1days_exp4279_rep1_18994
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep3_19162

description:
HybID: 19162
treated sample for experiment (RepID) 4298
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221636: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep2_19161
Replicate experimental sample: GSM221635: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep1_81455
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DICUMAROL, 5mg/kg, .25 days


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep2_13114

description:
HybID: 13114
treated sample for experiment (RepID) 2847
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221089: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep1_12841
Replicate experimental sample: GSM221091: LIVER_CARBON_TETRACHLORIDE_400mg/kg_1days_exp2847_rep3_15560
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_BUSULFAN_9mg/kg_5days_exp3238_rep3_14579

description:
HybID: 14579
treated sample for experiment (RepID) 3238
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221059: LIVER_BUSULFAN_9mg/kg_5days_exp3238_rep1_14578
Replicate experimental sample: GSM221060: LIVER_BUSULFAN_9mg/kg_5days_exp3238_rep2_14602
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BUSULFAN, 9mg/kg, 5 days

value: BUSULFAN

value: 9 mg/kg


title: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep3_12848

description:
HybID: 12848
treated sample for experiment (RepID) 2708
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221078: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep2_12849
Replicate experimental sample: GSM221077: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep1_13608
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, CARBON TETRACHLORIDE, 1175mg/kg, .25 days

value: .25 days


title: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep1_13608

description:
HybID: 13608
treated sample for experiment (RepID) 2708
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221079: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep3_12848
Replicate experimental sample: GSM221078: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep2_12849
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep3_12840

description:
HybID: 12840
treated sample for experiment (RepID) 2739
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221087: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep2_12839
Replicate experimental sample: GSM221086: LIVER_CARBON_TETRACHLORIDE_400mg/kg_.25days_exp2739_rep1_14766
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep2_19161

description:
HybID: 19161
treated sample for experiment (RepID) 4298
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221637: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep3_19162
Replicate experimental sample: GSM221635: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep1_81455
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep3_19164

description:
HybID: 19164
treated sample for experiment (RepID) 4322
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221633: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep2_19074
Replicate experimental sample: GSM221632: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep1_81456
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 3 days


title: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep3_19163

description:
HybID: 19163
treated sample for experiment (RepID) 4313
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221629: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep1_18995
Replicate experimental sample: GSM221630: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep2_18996
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DICUMAROL, 13mg/kg, 1 days

value: 1 days


title: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep1_18995

description:
HybID: 18995
treated sample for experiment (RepID) 4313
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221630: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep2_18996
Replicate experimental sample: GSM221631: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep3_19163
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep1_81455

description:
HybID: 81455
treated sample for experiment (RepID) 4298
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221636: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep2_19161
Replicate experimental sample: GSM221637: LIVER_DICUMAROL_5mg/kg_.25days_exp4298_rep3_19162
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep1_81456

description:
HybID: 81456
treated sample for experiment (RepID) 4322
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221633: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep2_19074
Replicate experimental sample: GSM221634: LIVER_DICUMAROL_13mg/kg_3days_exp4322_rep3_19164
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep2_18996

description:
HybID: 18996
treated sample for experiment (RepID) 4313
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221629: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep1_18995
Replicate experimental sample: GSM221631: LIVER_DICUMAROL_13mg/kg_1days_exp4313_rep3_19163
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep2_12849

description:
HybID: 12849
treated sample for experiment (RepID) 2708
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221079: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep3_12848
Replicate experimental sample: GSM221077: LIVER_CARBON_TETRACHLORIDE_1175mg/kg_.25days_exp2708_rep1_13608
Matched control sample: GSM204723: LIVER_vehicle_NA_3days_control_NA_12836
Matched control sample: GSM204878: LIVER_vehicle_NA_7days_control_NA_12838
Matched control sample: GSM204611: LIVER_vehicle_NA_.25days_control_NA_12903
Matched control sample: GSM204729: LIVER_vehicle_NA_3days_control_NA_12905
Matched control sample: GSM204835: LIVER_vehicle_NA_5days_control_NA_13027
Matched control sample: GSM204877: LIVER_vehicle_NA_7days_control_NA_13034
Matched control sample: GSM204761: LIVER_vehicle_NA_3days_control_NA_13051
Matched control sample: GSM204849: LIVER_vehicle_NA_5days_control_NA_13053
Matched control sample: GSM204625: LIVER_vehicle_NA_.25days_control_NA_13077
Matched control sample: GSM204656: LIVER_vehicle_NA_1days_control_NA_13085
Matched control sample: GSM204840: LIVER_vehicle_NA_5days_control_NA_13086
Matched control sample: GSM204744: LIVER_vehicle_NA_3days_control_NA_13153
Matched control sample: GSM204683: LIVER_vehicle_NA_1days_control_NA_13223
Matched control sample: GSM204599: LIVER_vehicle_NA_.25days_control_NA_13369
Matched control sample: GSM204665: LIVER_vehicle_NA_1days_control_NA_13371
Matched control sample: GSM204601: LIVER_vehicle_NA_.25days_control_NA_13424
Matched control sample: GSM204672: LIVER_vehicle_NA_1days_control_NA_13427
Matched control sample: GSM204595: LIVER_vehicle_NA_.25days_control_NA_13505
Matched control sample: GSM204755: LIVER_vehicle_NA_3days_control_NA_13509
Matched control sample: GSM204827: LIVER_vehicle_NA_5days_control_NA_13512
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep2_14576

description:
HybID: 14576
treated sample for experiment (RepID) 3250
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM221056: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep1_14575
Replicate experimental sample: GSM221058: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep3_14577
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BUSULFAN, 9mg/kg, 3 days


title: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep3_14577

description:
HybID: 14577
treated sample for experiment (RepID) 3250
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221056: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep1_14575
Replicate experimental sample: GSM221057: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep2_14576
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_BUSULFAN_9mg/kg_1days_exp3272_rep3_15479

description:
HybID: 15479
treated sample for experiment (RepID) 3272
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221053: LIVER_BUSULFAN_9mg/kg_1days_exp3272_rep1_14573
Replicate experimental sample: GSM221054: LIVER_BUSULFAN_9mg/kg_1days_exp3272_rep2_14574
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, BUSULFAN, 9mg/kg, 1 days


title: LIVER_DANAZOL_2000mg/kg_3days_exp4926_rep3_81322

description:
HybID: 81322
treated sample for experiment (RepID) 4926
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM221560: LIVER_DANAZOL_2000mg/kg_3days_exp4926_rep2_81323
Replicate experimental sample: GSM221559: LIVER_DANAZOL_2000mg/kg_3days_exp4926_rep1_81324
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, DANAZOL, 2000mg/kg, 3 days

value: DANAZOL

value: CMC


title: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep1_14575

description:
HybID: 14575
treated sample for experiment (RepID) 3250
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM221057: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep2_14576
Replicate experimental sample: GSM221058: LIVER_BUSULFAN_9mg/kg_3days_exp3250_rep3_14577
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf