title: LIVER_NEOSTIGMINE_BROMIDE_11mg/kg_.25days_exp4437_rep1_81460

description:
HybID: 81460
treated sample for experiment (RepID) 4437
replicate 1 of 2
Experimental sample
Replicate experimental sample: GSM223217: LIVER_NEOSTIGMINE_BROMIDE_11mg/kg_.25days_exp4437_rep2_81385
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, NEOSTIGMINE BROMIDE, 11mg/kg, .25 days

value: .25 days


title: LIVER_NEOSTIGMINE_BROMIDE_11mg/kg_.25days_exp4437_rep2_81385

status: Public on Mar 28 2008

type: RNA

city: Mountain View

first: Jeremy

last: Gollub

state: CA

address: 325 E. Middlefield Rd.

country: USA

institute: Iconix Biosciences

description:
HybID: 81385
treated sample for experiment (RepID) 4437
replicate 2 of 2
Experimental sample
Replicate experimental sample: GSM223216: LIVER_NEOSTIGMINE_BROMIDE_11mg/kg_.25days_exp4437_rep1_81460
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

hyb_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. 12.5 ug of cRNA sample was fragmented in 40 mM Tris-acetate (TrisOAc) pH7.9, 100 mM KOAc and 31.5 mM MgOAc at 94oC for 20 min. This typically resulted in a fragmented cRNA with a size range between 100 to 200 bases. 10 ug of the fragmented cRNA was used for hybridization of each Rat-Uniset I (RU1) Expression BioArray (Amersham Biosciences, Piscataway, NJ) in a volume of 260 ul, containing 78 ul of CodeLink Hyb buffer component A and 130 ul of CodeLink Hyb buffer component B (Amersham Biosciences, Piscataway, NJ). The hybridization solution was denatured at 90oC for 5 min then chilled on ice. The sample was vortexed at maximum speed for 5 sec and centrifuged at maximum speed for 5 min before 250 ul of the solution was injected into the inlet port of the flex-hybridization chamber, and placed in a CodeLink 12-slide shaker tray. The hybridization ports were sealed with 1 cm sealing strips (Amersham Biosciences, Piscataway, NJ), and the shaker tray(s) containing the slides was loaded into a New Brunswick Innova 4080 shaking incubator, with the hybridization chambers facing up. Slides were incubated for 20 hr at 37oC, while shaking at 300 rpm. The 12-slide shaker tray was removed from the shaker, and the hybridization chamber removed from each slide. Each slide was placed into the BioArray Rack of the Parallel Processing Tool (Amersham Biosciences, Piscataway, NJ) and incubated with 0.75x TNT (0.075 M Tris-HCl, pH7.6, 0.1125 M NaCl, 0.0375 % Tween-20) at 46oC for 1hr. The BioArray Rack was moved from the TNT containing reservoir to the small reagent reservoir containing 1:500 dilution of streptavidin-Alexa 647 (Molecular Probes, Eugene, OR). The signal was developed for 30 min at room temperature, before the reaction was stopped and slides were washed four times for 5 min each in TNT buffer (0.1 M Tris-HCl, pH7.6, 0.15 M NaCl, 0.05% Tween-20) using a large reagent reservoir. The slides were rinsed in ddH2O with 0.05% Tween-20 twice for 5 sec each before they were dried by centrifugation with a Qiagen Sigma 4-15C centrifuge (Valencia, CA) using a swinging bucket rotor (2x96) for exactly 3 min at 2000rpm (acceleration at position 9 and deceleration at position 9). The dried slides were stored in light protective slide boxes at room temperature prior to scanning.

scan_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The Axon GenePix Scanner (Axon Instrument, Union City, CA) was calibrated using the Calibration Slide supplied by Axon Instrument with GenePix 4.0 at 635 nm using the Calibration System. After calibration of the scanner, all processed slides were scanned with the laser set to 635 nm, the photomultiplier tube (PMT) voltage to 600 and the scan resolution to 10 microns. For consistency all slides were scanned the same day of color development, within an hour after dry spinning them and the data was analyzed using the CodeLink Expression Analysis Software version 2.2.25 (Amersham Biosciences, Piscataway, NJ).

data_processing: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44, supplemental methods.  Prior to statistical computation, the spot reading data was normalized. For this purpose a new nonlinear normalization procedure, similar to the centralization approach reported in the literature (Zien et al., 2001) was developed for the CodeLink array platform. The normalization procedure uses proprietary algorithm that assumes that in general, for an array with many probes, the majority of the signal represents genes that have unchanged expressions compared to controls, with the extreme values representing the true biology of the process and not some artifact due to measurement noise. The algorithm does not make the assumption that the true mRNA abundance being measured is linearly proportional to the spot reading signal or any assumption about the error distribution of such signals or their differential. Rather, the assumption of unchanged signals representing the bulk of the signal measurements is used to center a nonlinear curve fit to a reference template. This reference template is constructed for a large set of time matched, same tissue and same vehicle, control arrays, computing a median log signal for each probe. The replicate size of this set is adequate to ensure very small random error in the ensemble signal level for each reference probe. The curve fit corrects for some array processing problems, such as partial signal saturation, and improves the overall quality of the data compared to simple linear normalization methods. Essentially the curve tracks the mode of the signal distribution for sets of genes against the expected value for that set.

label: biotin

molecule: polyA RNA

organism: Rattus norvegicus

label_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. The methods used for cRNA preparation (cDNA synthesis, cRNA preparation, and cRNA purification) are essentially as described in the CodeLink™ manual v2.1 as supplied by Amersham Biosciences (Piscataway, NJ) using the Qiagen BioRobot 9604 (Valencia, CA). cDNA synthesis, cRNA preparation, and cRNA purification were completely processed in a 96-well format using the automated Qiagen BioRobot 9604 procedure. 0.6 – 20 ìg of enriched RNA from different tissue sources were added to a reaction mixture in a final volume of 12 ìl, containing bacterial control RNA (1.5pg FixA, 5pgYjeK, 5pg AraB, 15pg EntF, 50pg FixB, 150pg HisB, 500pg LeuB, 1500pg gnd) and 1.0 ìl of 100 pmol ìl-1 T7-(dT)24 oligonucleotide primer (Proligo, Boulder, CO). The T7-(dT)24 oligonucleotide primer used, is an HPLC purified 63-mer with the sequence : 5'-GGCCAGTGAATTGTAATACGACTCACTATAGGGAGGCGGTTTTTTTTTTTTTTTTTTTTTTTT-3'. The mixture was incubated for 10 min at 70oC and chilled on ice. On ice, 4 ul of 5x first-strand buffer, 2 ul 0.1 M DTT, 1 ul of 10 mM dNTP mix and 1 ul Superscript™II RNaseH-reverse transcriptase (200 U/ul) were added to the mixture to make a final volume of 20 ul. The mixture was incubated for 1 hr at 37oC. Second-strand cDNA was synthesized in a volume of 150 ul, containing 92 ul nuclease-free water, 30 ul of 5x second-strand buffer, 3 ul of 10 mM dNTP mix, 4 ul of Escherichia coli DNA polymerase I (10 U/ìl) and 1 ul of RNase H (2 U/ul) for 2 hr at 16oC. The cDNA was purified using a Qiagen QIAquick purification kit, and completely dried down using a Speed-Vac concentrator (45oC) for 2 hr. The dried product was resuspended in IVT reaction mix containing 3.0 ul of nuclease-free water, 4.0 ul 10x reaction buffer, 4.0 ul 75 mM ATP, 4.0 ul 75 mM GTP, 3.0 ul 75 mM CTP, 3.0 ul 75 mM UTP, 7.5 ul 10 mM Biotin 11-CTP, 7.5 ul 10 mM Biotin 11-UTP and 4.0 ul enzyme mix. The reaction mix was incubated for 14 hr at 37oC using an MJ Research 96-well PTC-200 Thermal Cycler (MJ Research, Waltham, MA), before the cRNA was purified using a Qiagen RNeasy® kit. The resulting cRNA yield was quantified using the 96-well ìQuan Universal Microplate Spectrophotometer Model MQX200 (BIO-TEK Instruments Inc., Winooski, VT) at a wavelength of 260 nm. Conformance of the cRNA sample to historical size distributions (the bulk of the cRNA product should be between 500 and 3,000 bases in size) was confirmed using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA). Samples not near the historical norm were reprocessed starting from tissue or RNA.

growth_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Sprague-Dawley (Crl:CD®(SD)|GS BR) rats (aged 6-8 weeks and weighing 200 - 260 g), were purchased from Charles River Laboratories (Wilmington, MA). They were housed in plastic cages for 1 week for acclimation to the laboratory environment of a ventilated room (temperature, 22oC ±3oC; humidity, 30 - 70%; light/dark cycle, 12 h d-1, 6:00am - 6:00pm) until use. Certified Rodent Diet #5002 (PMI Feeds Inc.) and chlorinated tap water was available ad libitum.

extract_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44. Following sacrifice, 6 mm disposable biopsy punches (#REF 33-36 Miltex, Inc. Bethpage, NY) were used to obtain tissue samples of approximately 100 mg. Samples were placed in cryogenic tubes and snap frozen. Poly A(+)-RNA from tissue samples was isolated using the MagNA Pure LC robot (Roche, Basel, Switzerland) in combination with the MagNA Pure LC mRNA Isolation kit I and II (Roche, Basel, Switzerland) for cells (see supplemental methods section) and tissues, respectively. Tissue samples were completely homogenized directly from ~100 mg punches stored on dry ice prior to application of lysis buffer to a final concentration of 65 mg tissue per ml of buffer. After complete homogenization, using disposable Omni Tip Disposable Generator Probes (Omni Inc, Warrenton, VA) and before loading of the samples into the 32-well MagNA Pure plate, the samples were drawn up 5-6 times through a 20-gauge needle attached to a 3-ml syringe to ensure any tissue pieces or clumps were removed from the lysate prior to robotic processing. Tissue sample processing was performed in duplicate wells (loading 150 ul of homogenized sample to each well) of the MagNA Pure LC, which is programmed to extract mRNA using the oligo-dT selection method into a final elution volume of 100 ul. Poly A(+) RNA sample concentration was performed manually using a standard ethanol precipitation protocol in the presence of glycogen (50 ug/ml). After precipitation the final purified RNA sample was resuspended in 7 ìl DEPC-H2O and quantified using a Ribogreen high-range assay (Molecular Probes) on the Wallac Victor2 Fluorometer (Perkin-Elmer, Fremont, CA). Additionally, the integrity of each RNA sample was determined, by comparison to historical standards (no gross degradation should be visible as suggested by clear 18S and 28S peaks on top of a hump of complex RNA, with lower amounts of RNA below 18S than under and above the 18S peak), using the Agilent 2100 BioAnalyzer (Agilent Technologies, Palo Alto, CA) in combination with the RNA 6000 Nano Lab Chip kit (Agilent Technologies).

treatment_protocol: See Ganter et al., J Biotechnol. 2005 Sep 29;119(3):219-44.  Compounds were administered via the route of administration (ROA) that corresponds to that by which humans receive the drug. Compounds were typically administered orally (PO) (83%), intravenously (IV) (9.4%), subcutaneously (SC) (5.7%), or intraperitoneally (IP) (2%). If the compound is a toxicant or a biochemical standard, it was administered orally. For oral dosing, the vehicle choice largely depends on the solubility of the compound in water. Water-soluble compounds were administered in water. Insoluble compounds are administered in either corn oil or 0.5% carboxymethylcellulose (CMC) using the best literature recommendation as a guide. IV administered compounds were usually dissolved in saline and SC administered compounds in corn oil. The highest dose the rats receive is the Maximum Tolerated Dose (MTD). The dosing of animals was staggered based on intended harvest order to ensure that sacrifice occurred within 30 minutes of the recorded time point. Dosing frequency was as described in Sample_characteristics for the particular treatment.

tag: Sprague-Dawley

tag: age

value: 6 to 8 weeks

tag: sex

value: male

tag: tissue

value: LIVER

tag: treatment compound

value: NEOSTIGMINE BROMIDE

tag: dose

value: 11 mg/kg

tag: solvent

value: WATER

tag: administration route

value: ORAL GAVAGE

tag: frequency of dosing

value: DAILY

tag: treatment duration

tag: experiment date


title: LIVER_AMITRAZ_75mg/kg_1days_exp6296_rep1_86616

description:
HybID: 86616
treated sample for experiment (RepID) 6296
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220614: LIVER_AMITRAZ_75mg/kg_1days_exp6296_rep3_86617
Replicate experimental sample: GSM220613: LIVER_AMITRAZ_75mg/kg_1days_exp6296_rep2_86618
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMITRAZ, 75mg/kg, 1 days

value: AMITRAZ

value: 75 mg/kg

value: CMC

value: 1 days


title: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep2_86319

description:
HybID: 86319
treated sample for experiment (RepID) 6210
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220609: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep1_86199
Replicate experimental sample: GSM220611: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep3_86320
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMIODARONE, 147mg/kg, 5 days

value: AMIODARONE

value: 147 mg/kg

value: 5 days


title: LIVER_AMITRAZ_75mg/kg_1days_exp6296_rep3_86617

description:
HybID: 86617
treated sample for experiment (RepID) 6296
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220612: LIVER_AMITRAZ_75mg/kg_1days_exp6296_rep1_86616
Replicate experimental sample: GSM220613: LIVER_AMITRAZ_75mg/kg_1days_exp6296_rep2_86618
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep1_86199

description:
HybID: 86199
treated sample for experiment (RepID) 6210
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220610: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep2_86319
Replicate experimental sample: GSM220611: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep3_86320
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep1_80500

description:
HybID: 80500
treated sample for experiment (RepID) 4737
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223127: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep2_80501
Replicate experimental sample: GSM223128: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep3_80502
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, NATEGLINIDE, 625mg/kg, 5 days

value: NATEGLINIDE

value: 625 mg/kg


title: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep2_80501

description:
HybID: 80501
treated sample for experiment (RepID) 4737
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223126: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep1_80500
Replicate experimental sample: GSM223128: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep3_80502
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 6 to 8 weeks


title: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep3_86320

description:
HybID: 86320
treated sample for experiment (RepID) 6210
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220609: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep1_86199
Replicate experimental sample: GSM220610: LIVER_AMIODARONE_147mg/kg_5days_exp6210_rep2_86319
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: male


title: LIVER_AMITRAZ_75mg/kg_3days_exp6302_rep1_86620

description:
HybID: 86620
treated sample for experiment (RepID) 6302
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220616: LIVER_AMITRAZ_75mg/kg_3days_exp6302_rep2_86619
Replicate experimental sample: GSM220617: LIVER_AMITRAZ_75mg/kg_3days_exp6302_rep3_86621
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMITRAZ, 75mg/kg, 3 days

value: LIVER

value: 3 days


title: LIVER_AMITRAZ_75mg/kg_3days_exp6302_rep2_86619

description:
HybID: 86619
treated sample for experiment (RepID) 6302
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220615: LIVER_AMITRAZ_75mg/kg_3days_exp6302_rep1_86620
Replicate experimental sample: GSM220617: LIVER_AMITRAZ_75mg/kg_3days_exp6302_rep3_86621
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep3_86317

description:
HybID: 86317
treated sample for experiment (RepID) 6206
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220606: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep1_86198
Replicate experimental sample: GSM220607: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep2_86318
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMIODARONE, 147mg/kg, 3 days


title: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep1_80407

description:
HybID: 80407
treated sample for experiment (RepID) 4716
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223125: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep3_80408
Replicate experimental sample: GSM223124: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep2_80558
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, NATEGLINIDE, 625mg/kg, 3 days


title: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep2_80558

description:
HybID: 80558
treated sample for experiment (RepID) 4716
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223123: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep1_80407
Replicate experimental sample: GSM223125: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep3_80408
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_AMOXICILLIN_1100mg/kg_3days_exp6032_rep1_85614

description:
HybID: 85614
treated sample for experiment (RepID) 6032
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220647: LIVER_AMOXICILLIN_1100mg/kg_3days_exp6032_rep3_85615
Replicate experimental sample: GSM220646: LIVER_AMOXICILLIN_1100mg/kg_3days_exp6032_rep2_85616
Matched control sample: GSM204808: LIVER_vehicle_NA_5days_control_NA_85526
Matched control sample: GSM204874: LIVER_vehicle_NA_5days_control_NA_85536
Matched control sample: GSM204676: LIVER_vehicle_NA_1days_control_NA_85576
Matched control sample: GSM204767: LIVER_vehicle_NA_3days_control_NA_85579
Matched control sample: GSM204829: LIVER_vehicle_NA_5days_control_NA_85582
Matched control sample: GSM204702: LIVER_vehicle_NA_1days_control_NA_85602
Matched control sample: GSM204653: LIVER_vehicle_NA_1days_control_NA_85604
Matched control sample: GSM204749: LIVER_vehicle_NA_3days_control_NA_85605
Matched control sample: GSM204788: LIVER_vehicle_NA_3days_control_NA_85607
Matched control sample: GSM204841: LIVER_vehicle_NA_5days_control_NA_85609
Matched control sample: GSM204668: LIVER_vehicle_NA_1days_control_NA_85835
Matched control sample: GSM204709: LIVER_vehicle_NA_1days_control_NA_85837
Matched control sample: GSM204734: LIVER_vehicle_NA_3days_control_NA_85839
Matched control sample: GSM204822: LIVER_vehicle_NA_5days_control_NA_85841
Matched control sample: GSM204864: LIVER_vehicle_NA_5days_control_NA_85843
Matched control sample: GSM204848: LIVER_vehicle_NA_5days_control_NA_85885
Matched control sample: GSM204605: LIVER_vehicle_NA_.25days_control_NA_85890
Matched control sample: GSM204628: LIVER_vehicle_NA_.25days_control_NA_85892
Matched control sample: GSM204710: LIVER_vehicle_NA_1days_control_NA_85897
Matched control sample: GSM204646: LIVER_vehicle_NA_1days_control_NA_85899
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMOXICILLIN, 1100mg/kg, 3 days

value: AMOXICILLIN


title: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep1_86198

description:
HybID: 86198
treated sample for experiment (RepID) 6206
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220608: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep3_86317
Replicate experimental sample: GSM220607: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep2_86318
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep1_86197

description:
HybID: 86197
treated sample for experiment (RepID) 6214
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220604: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep2_86315
Replicate experimental sample: GSM220605: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep3_86316
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMIODARONE, 147mg/kg, 1 days


title: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep3_80502

description:
HybID: 80502
treated sample for experiment (RepID) 4737
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223126: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep1_80500
Replicate experimental sample: GSM223127: LIVER_NATEGLINIDE_625mg/kg_5days_exp4737_rep2_80501
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep2_86318

description:
HybID: 86318
treated sample for experiment (RepID) 6206
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220606: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep1_86198
Replicate experimental sample: GSM220608: LIVER_AMIODARONE_147mg/kg_3days_exp6206_rep3_86317
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep3_80499

description:
HybID: 80499
treated sample for experiment (RepID) 4732
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223120: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep1_80498
Replicate experimental sample: GSM223121: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep2_80557
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, NATEGLINIDE, 625mg/kg, 1 days


title: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep3_83013

description:
HybID: 83013
treated sample for experiment (RepID) 5355
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220601: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep2_83012
Replicate experimental sample: GSM220600: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep1_83014
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMINOSALICYLIC ACID, 2337mg/kg, 5 days

value: AMINOSALICYLIC ACID


title: LIVER_NAPROXEN_10mg/kg_5days_exp3208_rep2_17207

description:
HybID: 17207
treated sample for experiment (RepID) 3208
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223112: LIVER_NAPROXEN_10mg/kg_5days_exp3208_rep1_14787
Replicate experimental sample: GSM223114: LIVER_NAPROXEN_10mg/kg_5days_exp3208_rep3_15694
Matched control sample: GSM204826: LIVER_vehicle_NA_5days_control_NA_14342
Matched control sample: GSM204616: LIVER_vehicle_NA_.25days_control_NA_14379
Matched control sample: GSM204802: LIVER_vehicle_NA_5days_control_NA_14389
Matched control sample: GSM204609: LIVER_vehicle_NA_.25days_control_NA_14439
Matched control sample: GSM204675: LIVER_vehicle_NA_1days_control_NA_14446
Matched control sample: GSM204745: LIVER_vehicle_NA_3days_control_NA_14449
Matched control sample: GSM204811: LIVER_vehicle_NA_5days_control_NA_14455
Matched control sample: GSM204738: LIVER_vehicle_NA_3days_control_NA_14705
Matched control sample: GSM204838: LIVER_vehicle_NA_5days_control_NA_14709
Matched control sample: GSM204750: LIVER_vehicle_NA_3days_control_NA_14804
Matched control sample: GSM204630: LIVER_vehicle_NA_.25days_control_NA_14819
Matched control sample: GSM204705: LIVER_vehicle_NA_1days_control_NA_14821
Matched control sample: GSM204834: LIVER_vehicle_NA_5days_control_NA_14823
Matched control sample: GSM204688: LIVER_vehicle_NA_1days_control_NA_14843
Matched control sample: GSM204757: LIVER_vehicle_NA_3days_control_NA_14940
Matched control sample: GSM204610: LIVER_vehicle_NA_.25days_control_NA_15242
Matched control sample: GSM204687: LIVER_vehicle_NA_1days_control_NA_15284
Matched control sample: GSM204619: LIVER_vehicle_NA_.25days_control_NA_15396
Matched control sample: GSM204780: LIVER_vehicle_NA_3days_control_NA_15420
Matched control sample: GSM204598: LIVER_vehicle_NA_.25days_control_NA_17885
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, NAPROXEN, 10mg/kg, 5 days

value: NAPROXEN

value: 10 mg/kg

value: CORN OIL

value: ORAL GAVAGE


title: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep3_86316

description:
HybID: 86316
treated sample for experiment (RepID) 6214
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220603: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep1_86197
Replicate experimental sample: GSM220604: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep2_86315
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: CMC

value: DAILY


title: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep3_80408

description:
HybID: 80408
treated sample for experiment (RepID) 4716
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223123: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep1_80407
Replicate experimental sample: GSM223124: LIVER_NATEGLINIDE_625mg/kg_3days_exp4716_rep2_80558
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep1_83014

description:
HybID: 83014
treated sample for experiment (RepID) 5355
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220601: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep2_83012
Replicate experimental sample: GSM220602: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep3_83013
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep2_80557

description:
HybID: 80557
treated sample for experiment (RepID) 4732
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223120: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep1_80498
Replicate experimental sample: GSM223122: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep3_80499
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 1 days


title: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep2_83012

description:
HybID: 83012
treated sample for experiment (RepID) 5355
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220602: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep3_83013
Replicate experimental sample: GSM220600: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_5days_exp5355_rep1_83014
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf


title: LIVER_N-NITROSODIETHYLAMINE_1.67mg/kg_1days_exp3006_rep3_16111

description:
HybID: 16111
treated sample for experiment (RepID) 3006
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223060: LIVER_N-NITROSODIETHYLAMINE_1.67mg/kg_1days_exp3006_rep2_13976
Replicate experimental sample: GSM223059: LIVER_N-NITROSODIETHYLAMINE_1.67mg/kg_1days_exp3006_rep1_13977
Matched control sample: GSM204626: LIVER_vehicle_NA_.25days_control_NA_13650
Matched control sample: GSM204603: LIVER_vehicle_NA_.25days_control_NA_13655
Matched control sample: GSM204679: LIVER_vehicle_NA_1days_control_NA_13657
Matched control sample: GSM204743: LIVER_vehicle_NA_3days_control_NA_13660
Matched control sample: GSM204617: LIVER_vehicle_NA_.25days_control_NA_13855
Matched control sample: GSM204756: LIVER_vehicle_NA_3days_control_NA_13867
Matched control sample: GSM204825: LIVER_vehicle_NA_5days_control_NA_13875
Matched control sample: GSM204615: LIVER_vehicle_NA_.25days_control_NA_13923
Matched control sample: GSM204658: LIVER_vehicle_NA_1days_control_NA_13925
Matched control sample: GSM204736: LIVER_vehicle_NA_3days_control_NA_13932
Matched control sample: GSM204846: LIVER_vehicle_NA_5days_control_NA_14006
Matched control sample: GSM204614: LIVER_vehicle_NA_.25days_control_NA_14066
Matched control sample: GSM204661: LIVER_vehicle_NA_1days_control_NA_14072
Matched control sample: GSM204762: LIVER_vehicle_NA_3days_control_NA_14076
Matched control sample: GSM204612: LIVER_vehicle_NA_.25days_control_NA_14190
Matched control sample: GSM204818: LIVER_vehicle_NA_5days_control_NA_14279
Matched control sample: GSM204655: LIVER_vehicle_NA_1days_control_NA_14288
Matched control sample: GSM204823: LIVER_vehicle_NA_5days_control_NA_14298
Matched control sample: GSM204645: LIVER_vehicle_NA_1days_control_NA_14306
Matched control sample: GSM204735: LIVER_vehicle_NA_3days_control_NA_14311
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, N-NITROSODIETHYLAMINE, 1.67mg/kg, 1 days

value: N-NITROSODIETHYLAMINE

value: SALINE


title: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep2_83008

description:
HybID: 83008
treated sample for experiment (RepID) 5313
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220597: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep1_83006
Replicate experimental sample: GSM220599: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep3_83007
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMINOSALICYLIC ACID, 2337mg/kg, 1 days


title: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep2_86315

description:
HybID: 86315
treated sample for experiment (RepID) 6214
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220603: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep1_86197
Replicate experimental sample: GSM220605: LIVER_AMIODARONE_147mg/kg_1days_exp6214_rep3_86316
Matched control sample: GSM223150: LIVER_vehicle_NA_1days_control_NA_86229
Matched control sample: GSM223145: LIVER_vehicle_NA_1days_control_NA_86230
Matched control sample: GSM223137: LIVER_vehicle_NA_1days_control_NA_86231
Matched control sample: GSM223164: LIVER_vehicle_NA_3days_control_NA_86232
Matched control sample: GSM223157: LIVER_vehicle_NA_3days_control_NA_86234
Matched control sample: GSM223175: LIVER_vehicle_NA_5days_control_NA_86235
Matched control sample: GSM223190: LIVER_vehicle_NA_5days_control_NA_86236
Matched control sample: GSM223184: LIVER_vehicle_NA_5days_control_NA_86237
Matched control sample: GSM223166: LIVER_vehicle_NA_3days_control_NA_86358
Matched control sample: GSM223158: LIVER_vehicle_NA_3days_control_NA_86359
Matched control sample: GSM223169: LIVER_vehicle_NA_3days_control_NA_86460
Matched control sample: GSM223170: LIVER_vehicle_NA_3days_control_NA_86461
Matched control sample: GSM223168: LIVER_vehicle_NA_3days_control_NA_86462
Matched control sample: GSM223171: LIVER_vehicle_NA_3days_control_NA_86463
Matched control sample: GSM223167: LIVER_vehicle_NA_3days_control_NA_86532
Matched control sample: GSM223165: LIVER_vehicle_NA_3days_control_NA_86533
Matched control sample: GSM223159: LIVER_vehicle_NA_3days_control_NA_86534
Matched control sample: GSM223176: LIVER_vehicle_NA_5days_control_NA_86535
Matched control sample: GSM223185: LIVER_vehicle_NA_5days_control_NA_86536
Matched control sample: GSM223191: LIVER_vehicle_NA_5days_control_NA_86537
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: AMIODARONE

value: 147 mg/kg


title: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep3_83007

description:
HybID: 83007
treated sample for experiment (RepID) 5313
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220597: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep1_83006
Replicate experimental sample: GSM220598: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep2_83008
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 6 to 8 weeks


title: LIVER_MODAFINIL_17.5mg/kg_5days_exp3548_rep3_16922

description:
HybID: 16922
treated sample for experiment (RepID) 3548
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM223001: LIVER_MODAFINIL_17.5mg/kg_5days_exp3548_rep2_15885
Replicate experimental sample: GSM223000: LIVER_MODAFINIL_17.5mg/kg_5days_exp3548_rep1_15886
Matched control sample: GSM204620: LIVER_vehicle_NA_.25days_control_NA_14583
Matched control sample: GSM204684: LIVER_vehicle_NA_1days_control_NA_14588
Matched control sample: GSM204775: LIVER_vehicle_NA_3days_control_NA_14592
Matched control sample: GSM204817: LIVER_vehicle_NA_5days_control_NA_14598
Matched control sample: GSM204622: LIVER_vehicle_NA_.25days_control_NA_14645
Matched control sample: GSM204680: LIVER_vehicle_NA_1days_control_NA_14648
Matched control sample: GSM204853: LIVER_vehicle_NA_5days_control_NA_14862
Matched control sample: GSM204613: LIVER_vehicle_NA_.25days_control_NA_14889
Matched control sample: GSM204666: LIVER_vehicle_NA_1days_control_NA_14896
Matched control sample: GSM204770: LIVER_vehicle_NA_3days_control_NA_14936
Matched control sample: GSM204732: LIVER_vehicle_NA_3days_control_NA_14961
Matched control sample: GSM204740: LIVER_vehicle_NA_3days_control_NA_14967
Matched control sample: GSM204681: LIVER_vehicle_NA_1days_control_NA_15458
Matched control sample: GSM204662: LIVER_vehicle_NA_1days_control_NA_15515
Matched control sample: GSM204618: LIVER_vehicle_NA_.25days_control_NA_15564
Matched control sample: GSM204739: LIVER_vehicle_NA_3days_control_NA_15617
Matched control sample: GSM204847: LIVER_vehicle_NA_5days_control_NA_15788
Matched control sample: GSM204810: LIVER_vehicle_NA_5days_control_NA_15859
Matched control sample: GSM204606: LIVER_vehicle_NA_.25days_control_NA_16114
Matched control sample: GSM204859: LIVER_vehicle_NA_5days_control_NA_16643
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, MODAFINIL, 17.5mg/kg, 5 days

value: male

value: MODAFINIL

value: 5 days


title: LIVER_MIFEPRISTONE_3mg/kg_1days_exp3140_rep1_18270

description:
HybID: 18270
treated sample for experiment (RepID) 3140
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM222954: LIVER_MIFEPRISTONE_3mg/kg_1days_exp3140_rep3_14033
Replicate experimental sample: GSM222953: LIVER_MIFEPRISTONE_3mg/kg_1days_exp3140_rep2_14034
Matched control sample: GSM204626: LIVER_vehicle_NA_.25days_control_NA_13650
Matched control sample: GSM204603: LIVER_vehicle_NA_.25days_control_NA_13655
Matched control sample: GSM204679: LIVER_vehicle_NA_1days_control_NA_13657
Matched control sample: GSM204743: LIVER_vehicle_NA_3days_control_NA_13660
Matched control sample: GSM204617: LIVER_vehicle_NA_.25days_control_NA_13855
Matched control sample: GSM204756: LIVER_vehicle_NA_3days_control_NA_13867
Matched control sample: GSM204825: LIVER_vehicle_NA_5days_control_NA_13875
Matched control sample: GSM204615: LIVER_vehicle_NA_.25days_control_NA_13923
Matched control sample: GSM204658: LIVER_vehicle_NA_1days_control_NA_13925
Matched control sample: GSM204736: LIVER_vehicle_NA_3days_control_NA_13932
Matched control sample: GSM204846: LIVER_vehicle_NA_5days_control_NA_14006
Matched control sample: GSM204614: LIVER_vehicle_NA_.25days_control_NA_14066
Matched control sample: GSM204661: LIVER_vehicle_NA_1days_control_NA_14072
Matched control sample: GSM204762: LIVER_vehicle_NA_3days_control_NA_14076
Matched control sample: GSM204612: LIVER_vehicle_NA_.25days_control_NA_14190
Matched control sample: GSM204818: LIVER_vehicle_NA_5days_control_NA_14279
Matched control sample: GSM204655: LIVER_vehicle_NA_1days_control_NA_14288
Matched control sample: GSM204823: LIVER_vehicle_NA_5days_control_NA_14298
Matched control sample: GSM204645: LIVER_vehicle_NA_1days_control_NA_14306
Matched control sample: GSM204735: LIVER_vehicle_NA_3days_control_NA_14311
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, MIFEPRISTONE, 3mg/kg, 1 days

value: LIVER

value: MIFEPRISTONE

value: 3 mg/kg


title: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep1_80498

description:
HybID: 80498
treated sample for experiment (RepID) 4732
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM223122: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep3_80499
Replicate experimental sample: GSM223121: LIVER_NATEGLINIDE_625mg/kg_1days_exp4732_rep2_80557
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: NATEGLINIDE

value: 625 mg/kg


title: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep1_83006

description:
HybID: 83006
treated sample for experiment (RepID) 5313
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220599: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep3_83007
Replicate experimental sample: GSM220598: LIVER_AMINOSALICYLIC_ACID_2337mg/kg_1days_exp5313_rep2_83008
Matched control sample: GSM204713: LIVER_vehicle_NA_1days_control_NA_83015
Matched control sample: GSM204692: LIVER_vehicle_NA_1days_control_NA_83016
Matched control sample: GSM204644: LIVER_vehicle_NA_1days_control_NA_83017
Matched control sample: GSM204786: LIVER_vehicle_NA_3days_control_NA_83019
Matched control sample: GSM204763: LIVER_vehicle_NA_3days_control_NA_83020
Matched control sample: GSM204866: LIVER_vehicle_NA_5days_control_NA_83021
Matched control sample: GSM204872: LIVER_vehicle_NA_5days_control_NA_83022
Matched control sample: GSM204805: LIVER_vehicle_NA_5days_control_NA_83023
Matched control sample: GSM204673: LIVER_vehicle_NA_1days_control_NA_83413
Matched control sample: GSM204706: LIVER_vehicle_NA_1days_control_NA_83414
Matched control sample: GSM204731: LIVER_vehicle_NA_3days_control_NA_83416
Matched control sample: GSM204773: LIVER_vehicle_NA_3days_control_NA_83417
Matched control sample: GSM204791: LIVER_vehicle_NA_3days_control_NA_83418
Matched control sample: GSM204842: LIVER_vehicle_NA_5days_control_NA_83504
Matched control sample: GSM204851: LIVER_vehicle_NA_5days_control_NA_83507
Matched control sample: GSM204809: LIVER_vehicle_NA_5days_control_NA_83508
Matched control sample: GSM204801: LIVER_vehicle_NA_5days_control_NA_83510
Matched control sample: GSM204858: LIVER_vehicle_NA_5days_control_NA_83519
Matched control sample: GSM204816: LIVER_vehicle_NA_5days_control_NA_83531
Matched control sample: GSM204854: LIVER_vehicle_NA_5days_control_NA_83532
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: AMINOSALICYLIC ACID

value: ORAL GAVAGE


title: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep2_18914

description:
HybID: 18914
treated sample for experiment (RepID) 4278
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM222908: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep3_18915
Replicate experimental sample: GSM222906: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep1_18990
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, METRONIDAZOLE, 50mg/kg, 1 days

value: METRONIDAZOLE

value: 50 mg/kg

value: WATER

value: DAILY


title: LIVER_AMOXICILLIN_1100mg/kg_5days_exp6035_rep1_85618

description:
HybID: 85618
treated sample for experiment (RepID) 6035
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM220649: LIVER_AMOXICILLIN_1100mg/kg_5days_exp6035_rep2_85617
Replicate experimental sample: GSM220650: LIVER_AMOXICILLIN_1100mg/kg_5days_exp6035_rep3_85619
Matched control sample: GSM204808: LIVER_vehicle_NA_5days_control_NA_85526
Matched control sample: GSM204874: LIVER_vehicle_NA_5days_control_NA_85536
Matched control sample: GSM204676: LIVER_vehicle_NA_1days_control_NA_85576
Matched control sample: GSM204767: LIVER_vehicle_NA_3days_control_NA_85579
Matched control sample: GSM204829: LIVER_vehicle_NA_5days_control_NA_85582
Matched control sample: GSM204702: LIVER_vehicle_NA_1days_control_NA_85602
Matched control sample: GSM204653: LIVER_vehicle_NA_1days_control_NA_85604
Matched control sample: GSM204749: LIVER_vehicle_NA_3days_control_NA_85605
Matched control sample: GSM204788: LIVER_vehicle_NA_3days_control_NA_85607
Matched control sample: GSM204841: LIVER_vehicle_NA_5days_control_NA_85609
Matched control sample: GSM204668: LIVER_vehicle_NA_1days_control_NA_85835
Matched control sample: GSM204709: LIVER_vehicle_NA_1days_control_NA_85837
Matched control sample: GSM204734: LIVER_vehicle_NA_3days_control_NA_85839
Matched control sample: GSM204822: LIVER_vehicle_NA_5days_control_NA_85841
Matched control sample: GSM204864: LIVER_vehicle_NA_5days_control_NA_85843
Matched control sample: GSM204848: LIVER_vehicle_NA_5days_control_NA_85885
Matched control sample: GSM204605: LIVER_vehicle_NA_.25days_control_NA_85890
Matched control sample: GSM204628: LIVER_vehicle_NA_.25days_control_NA_85892
Matched control sample: GSM204710: LIVER_vehicle_NA_1days_control_NA_85897
Matched control sample: GSM204646: LIVER_vehicle_NA_1days_control_NA_85899
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, AMOXICILLIN, 1100mg/kg, 5 days

value: AMOXICILLIN


title: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep3_18915

description:
HybID: 18915
treated sample for experiment (RepID) 4278
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM222907: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep2_18914
Replicate experimental sample: GSM222906: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep1_18990
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 1 days


title: LIVER_N,N-DIMETHYLFORMAMIDE_700mg/kg_7days_exp2869_rep2_18504

description:
HybID: 18504
treated sample for experiment (RepID) 2869
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM223055: LIVER_N,N-DIMETHYLFORMAMIDE_700mg/kg_7days_exp2869_rep3_13037
Replicate experimental sample: GSM223053: LIVER_N,N-DIMETHYLFORMAMIDE_700mg/kg_7days_exp2869_rep1_14772
Matched control sample: GSM204826: LIVER_vehicle_NA_5days_control_NA_14342
Matched control sample: GSM204616: LIVER_vehicle_NA_.25days_control_NA_14379
Matched control sample: GSM204802: LIVER_vehicle_NA_5days_control_NA_14389
Matched control sample: GSM204609: LIVER_vehicle_NA_.25days_control_NA_14439
Matched control sample: GSM204675: LIVER_vehicle_NA_1days_control_NA_14446
Matched control sample: GSM204745: LIVER_vehicle_NA_3days_control_NA_14449
Matched control sample: GSM204811: LIVER_vehicle_NA_5days_control_NA_14455
Matched control sample: GSM204738: LIVER_vehicle_NA_3days_control_NA_14705
Matched control sample: GSM204838: LIVER_vehicle_NA_5days_control_NA_14709
Matched control sample: GSM204750: LIVER_vehicle_NA_3days_control_NA_14804
Matched control sample: GSM204630: LIVER_vehicle_NA_.25days_control_NA_14819
Matched control sample: GSM204705: LIVER_vehicle_NA_1days_control_NA_14821
Matched control sample: GSM204834: LIVER_vehicle_NA_5days_control_NA_14823
Matched control sample: GSM204688: LIVER_vehicle_NA_1days_control_NA_14843
Matched control sample: GSM204757: LIVER_vehicle_NA_3days_control_NA_14940
Matched control sample: GSM204610: LIVER_vehicle_NA_.25days_control_NA_15242
Matched control sample: GSM204687: LIVER_vehicle_NA_1days_control_NA_15284
Matched control sample: GSM204619: LIVER_vehicle_NA_.25days_control_NA_15396
Matched control sample: GSM204780: LIVER_vehicle_NA_3days_control_NA_15420
Matched control sample: GSM204598: LIVER_vehicle_NA_.25days_control_NA_17885
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, N,N-DIMETHYLFORMAMIDE, 700mg/kg, 7 days

value: 6 to 8 weeks

value: N,N-DIMETHYLFORMAMIDE

value: 700 mg/kg

value: SALINE

value: 7 days


title: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_91days_exp6314_rep3_86671

description:
HybID: 86671
treated sample for experiment (RepID) 6314
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220541: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_91days_exp6314_rep2_86672
Replicate experimental sample: GSM220540: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_91days_exp6314_rep1_86673
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, ALPHA-NAPHTHOFLAVONE, 80mg/kg, 91 days

value: male

value: LIVER

value: ALPHA-NAPHTHOFLAVONE

value: 80 mg/kg

value: CMC

value: 91 days


title: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_91days_exp6314_rep2_86672

description:
HybID: 86672
treated sample for experiment (RepID) 6314
replicate 2 of 3
Experimental sample
Replicate experimental sample: GSM220542: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_91days_exp6314_rep3_86671
Replicate experimental sample: GSM220540: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_91days_exp6314_rep1_86673
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: ORAL GAVAGE


title: LIVER_METRONIDAZOLE_50mg/kg_.25days_exp4292_rep1_18989

description:
HybID: 18989
treated sample for experiment (RepID) 4292
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM222904: LIVER_METRONIDAZOLE_50mg/kg_.25days_exp4292_rep2_18912
Replicate experimental sample: GSM222905: LIVER_METRONIDAZOLE_50mg/kg_.25days_exp4292_rep3_18913
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, METRONIDAZOLE, 50mg/kg, .25 days

value: METRONIDAZOLE

value: 50 mg/kg

value: .25 days


title: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_5days_exp6319_rep3_86666

description:
HybID: 86666
treated sample for experiment (RepID) 6319
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM220537: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_5days_exp6319_rep1_86665
Replicate experimental sample: GSM220538: LIVER_ALPHA-NAPHTHOFLAVONE_80mg/kg_5days_exp6319_rep2_86667
Matched control sample: GSM204831: LIVER_vehicle_NA_5days_control_NA_86647
Matched control sample: GSM204857: LIVER_vehicle_NA_5days_control_NA_86649
Matched control sample: GSM204721: LIVER_vehicle_NA_28days_control_NA_86650
Matched control sample: GSM204720: LIVER_vehicle_NA_28days_control_NA_86651
Matched control sample: GSM204880: LIVER_vehicle_NA_91days_control_NA_86653
Matched control sample: GSM204881: LIVER_vehicle_NA_91days_control_NA_86655
Matched control sample: GSM204701: LIVER_vehicle_NA_1days_control_NA_86693
Matched control sample: GSM204636: LIVER_vehicle_NA_1days_control_NA_86694
Matched control sample: GSM204747: LIVER_vehicle_NA_3days_control_NA_86714
Matched control sample: GSM204820: LIVER_vehicle_NA_5days_control_NA_86744
Matched control sample: GSM204664: LIVER_vehicle_NA_1days_control_NA_86757
Matched control sample: GSM204862: LIVER_vehicle_NA_5days_control_NA_86795
Matched control sample: GSM204783: LIVER_vehicle_NA_3days_control_NA_86796
Matched control sample: GSM204641: LIVER_vehicle_NA_1days_control_NA_86828
Matched control sample: GSM204814: LIVER_vehicle_NA_5days_control_NA_86831
Matched control sample: GSM204600: LIVER_vehicle_NA_.25days_control_NA_86882
Matched control sample: GSM204777: LIVER_vehicle_NA_3days_control_NA_86900
Matched control sample: GSM204627: LIVER_vehicle_NA_.25days_control_NA_86918
Matched control sample: GSM204748: LIVER_vehicle_NA_3days_control_NA_86923
Matched control sample: GSM204695: LIVER_vehicle_NA_1days_control_NA_87048
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

source_name: LIVER, ALPHA-NAPHTHOFLAVONE, 80mg/kg, 5 days

value: DAILY

value: 5 days


title: LIVER_METRONIDAZOLE_50mg/kg_.25days_exp4292_rep3_18913

description:
HybID: 18913
treated sample for experiment (RepID) 4292
replicate 3 of 3
Experimental sample
Replicate experimental sample: GSM222904: LIVER_METRONIDAZOLE_50mg/kg_.25days_exp4292_rep2_18912
Replicate experimental sample: GSM222903: LIVER_METRONIDAZOLE_50mg/kg_.25days_exp4292_rep1_18989
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 6 to 8 weeks

value: WATER


title: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep1_18990

description:
HybID: 18990
treated sample for experiment (RepID) 4278
replicate 1 of 3
Experimental sample
Replicate experimental sample: GSM222907: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep2_18914
Replicate experimental sample: GSM222908: LIVER_METRONIDAZOLE_50mg/kg_1days_exp4278_rep3_18915
Matched control sample: GSM204608: LIVER_vehicle_NA_.25days_control_NA_18857
Matched control sample: GSM204708: LIVER_vehicle_NA_1days_control_NA_18859
Matched control sample: GSM204742: LIVER_vehicle_NA_3days_control_NA_18863
Matched control sample: GSM204602: LIVER_vehicle_NA_.25days_control_NA_18865
Matched control sample: GSM204691: LIVER_vehicle_NA_1days_control_NA_18868
Matched control sample: GSM204760: LIVER_vehicle_NA_3days_control_NA_18872
Matched control sample: GSM204663: LIVER_vehicle_NA_1days_control_NA_18986
Matched control sample: GSM204604: LIVER_vehicle_NA_.25days_control_NA_19233
Matched control sample: GSM204677: LIVER_vehicle_NA_1days_control_NA_19236
Matched control sample: GSM204771: LIVER_vehicle_NA_3days_control_NA_19238
Matched control sample: GSM204642: LIVER_vehicle_NA_1days_control_NA_80157
Matched control sample: GSM204718: LIVER_vehicle_NA_1days_control_NA_80159
Matched control sample: GSM204621: LIVER_vehicle_NA_.25days_control_NA_80565
Matched control sample: GSM204768: LIVER_vehicle_NA_3days_control_NA_80570
Matched control sample: GSM204868: LIVER_vehicle_NA_5days_control_NA_80573
Matched control sample: GSM204669: LIVER_vehicle_NA_1days_control_NA_80683
Matched control sample: GSM204629: LIVER_vehicle_NA_.25days_control_NA_81664
Matched control sample: GSM204782: LIVER_vehicle_NA_3days_control_NA_81665
Guidelines for commercial use:
http://www.iconixbiosciences.com/guidelineCommUse.pdf

value: 1 days