title: Em-19-2 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65775.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1560, 34270; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-24; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 660; Parameter Laser on time = 68161; Parameter Laser Power = 3.52; Parameter Scan Time = 10:24:07; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.88; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-24; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 840; Parameter Scan Power = 100; Parameter Laser on time = 68187; Parameter Laser Power = 3.70; Parameter Scan Time = 10:24:07; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.88; Performer: Nina,,Salama

tag: Emory strain Em-19-2


title: Em-14-2

status: Public on Nov 05 2009

type: genomic

city: Seattle

first: Nina

middle: Reda

last: Salama

state: WA

address: 1100 Fairview Ave. N

department: Division of Human Biology

country: USA

institute: Fred Hutchinson Cancer Research Center

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2008-10/81724.gif

hyb_protocol: not provided

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1480, 8160; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 25.66; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 25.66; Performer: Nina,,Salama

data_processing: VALUE is Log (base 2) of the ratio of the median of Channel 2 (635 nm) to Channel 1 (532 nm)

molecule: genomic DNA

organism: Helicobacter pylori

source_name: 500 ng 26695/J99 genomic DNA mix

label_protocol: 500 ng of genomic DNA of a reference sample (equimolar mix of 26695 and J99) was labeled with Cy3

extract_protocol: Genomic DNA extracted from reference strains 26695 and J99, and then mixed in equimolar concentrations.

tag: Equimolar mix of strains 26695/J99

tag: Reference DNA

label_protocol: 500 ng of genomic DNA of each test strain was labeled with Cy5

extract_protocol: Initial strain isolation from antral biopsies performed at Emory and culture sweeps sent to FHCRC (Seattle) for analysis. Single colony isolates (4) from each patient antral biopsy were isolated and profiled using RAPD. A single clone of each RAPD type detected in each patient (1-2) were analyzed. Genomic DNA was extracted and analyzed on duplicate arrays.

tag: Test Strain

tag: Emory strain Em-14-2


title: Em-33-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65804.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1820, 8270; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 590; Parameter Laser on time = 75878; Parameter Laser Power = 3.45; Parameter Scan Time = 16:04:03; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.25; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 580; Parameter Scan Power = 100; Parameter Laser on time = 76307; Parameter Laser Power = 3.76; Parameter Scan Time = 16:04:03; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.25; Performer: Nina,,Salama

tag: Emory strain Em-33-1


title: Em-29-2 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65794.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1040, 35080; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 560; Parameter Laser on time = 75868; Parameter Laser Power = 3.45; Parameter Scan Time = 15:54:30; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.13; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 610; Parameter Scan Power = 100; Parameter Laser on time = 76297; Parameter Laser Power = 3.76; Parameter Scan Time = 15:54:30; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.13; Performer: Nina,,Salama

tag: Emory strain Em-29-2


title: Em-3-3

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65801.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1390, 35060; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-14; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 470; Parameter Laser on time = 73140; Parameter Laser Power = 3.48; Parameter Scan Time = 13:13:49; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.29; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-14; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 530; Parameter Scan Power = 100; Parameter Laser on time = 73400; Parameter Laser Power = 3.75; Parameter Scan Time = 13:13:49; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.29; Performer: Nina,,Salama

tag: Emory strain Em-3-3


title: Em-50-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65847.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1380, 8410; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-23; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 560; Parameter Laser on time = 76173; Parameter Laser Power = 3.44; Parameter Scan Time = 12:07:22; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.99; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-23; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 570; Parameter Scan Power = 100; Parameter Laser on time = 76602; Parameter Laser Power = 3.76; Parameter Scan Time = 12:07:22; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.99; Performer: Nina,,Salama

tag: Emory strain Em-50-1


title: Em-18-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65770.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1670, 34450; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 570; Parameter Laser on time = 75851; Parameter Laser Power = 3.44; Parameter Scan Time = 15:37:21; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.04; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 570; Parameter Scan Power = 100; Parameter Laser on time = 76280; Parameter Laser Power = 3.75; Parameter Scan Time = 15:37:21; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.04; Performer: Nina,,Salama

tag: Emory strain Em-18-1


title: Em-35-4

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65810.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1390, 35730; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 530; Parameter Laser on time = 75258; Parameter Laser Power = 3.46; Parameter Scan Time = 09:28:09; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.59; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 670; Parameter Scan Power = 100; Parameter Laser on time = 75687; Parameter Laser Power = 3.77; Parameter Scan Time = 09:28:09; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.59; Performer: Nina,,Salama

tag: Emory strain Em-35-4


title: Em-31-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65797.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1800, 8250; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-13; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 630; Parameter Laser on time = 68892; Parameter Laser Power = 3.39; Parameter Scan Time = 12:54:46; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.94; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-13; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 810; Parameter Scan Power = 100; Parameter Laser on time = 68918; Parameter Laser Power = 3.70; Parameter Scan Time = 12:54:46; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.94; Performer: Nina,,Salama

tag: Emory strain Em-31-2


title: Em-5-3

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65850.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 760, 7520; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 480; Parameter Laser on time = 73400; Parameter Laser Power = 3.57; Parameter Scan Time = 11:19:34; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.41; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 570; Parameter Scan Power = 100; Parameter Laser on time = 73660; Parameter Laser Power = 3.74; Parameter Scan Time = 11:19:34; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.41; Performer: Nina,,Salama

tag: Emory strain Em-5-3


title: Em-51-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65848.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1870, 34870; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-22; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 610; Parameter Laser on time = 76007; Parameter Laser Power = 3.45; Parameter Scan Time = 11:21:58; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.10; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-22; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 670; Parameter Scan Power = 100; Parameter Laser on time = 76435; Parameter Laser Power = 3.75; Parameter Scan Time = 11:21:58; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.10; Performer: Nina,,Salama

tag: Emory strain Em-51-2


title: Em-15-3

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65764.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1330, 8970; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-29; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 480; Parameter Laser on time = 74661; Parameter Laser Power = 3.46; Parameter Scan Time = 15:44:15; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 34.17; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-29; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 570; Parameter Scan Power = 100; Parameter Laser on time = 75052; Parameter Laser Power = 3.83; Parameter Scan Time = 15:44:15; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 34.17; Performer: Nina,,Salama

tag: Emory strain Em-15-3


title: Em-47-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65840.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1410, 8930; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-28; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 490; Parameter Laser on time = 75755; Parameter Laser Power = 3.46; Parameter Scan Time = 13:28:21; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.68; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-28; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 590; Parameter Scan Power = 100; Parameter Laser on time = 76184; Parameter Laser Power = 3.76; Parameter Scan Time = 13:28:21; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.68; Performer: Nina,,Salama

tag: Emory strain Em-47-1


title: Em-8-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65857.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1480, 9080; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-20; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 520; Parameter Laser on time = 67886; Parameter Laser Power = 3.63; Parameter Scan Time = 11:26:41; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.42; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-20; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 580; Parameter Scan Power = 100; Parameter Laser on time = 67944; Parameter Laser Power = 3.72; Parameter Scan Time = 11:26:41; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.42; Performer: Nina,,Salama

tag: Emory strain Em-8-1


title: Em-37-4

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65814.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1480, 8160; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-15; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 490; Parameter Laser on time = 68967; Parameter Laser Power = 3.44; Parameter Scan Time = 14:15:46; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.88; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-15; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 630; Parameter Scan Power = 100; Parameter Laser on time = 68993; Parameter Laser Power = 3.71; Parameter Scan Time = 14:15:46; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.88; Performer: Nina,,Salama

tag: Emory strain Em-37-4


title: Em-10-4 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65755.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1670, 34450; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 570; Parameter Laser on time = 75846; Parameter Laser Power = 3.45; Parameter Scan Time = 15:32:03; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 32.98; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 570; Parameter Scan Power = 100; Parameter Laser on time = 76275; Parameter Laser Power = 3.74; Parameter Scan Time = 15:32:03; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 32.98; Performer: Nina,,Salama

tag: Equimolar mix of strains 26695/J99

tag: Emory strain Em-10-4


title: Em-47-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2008-10/81728.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1590, 35010; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 30.97; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 30.97; Performer: Nina,,Salama

tag: Reference DNA

tag: Test Strain


title: Em-36-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65812.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1080, 8480; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-08-31; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 500; Parameter Laser on time = 71743; Parameter Laser Power = 3.54; Parameter Scan Time = 11:31:59; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 28.01; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-08-31; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 560; Parameter Scan Power = 100; Parameter Laser on time = 71894; Parameter Laser Power = 3.57; Parameter Scan Time = 11:31:59; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 28.01; Performer: Nina,,Salama

tag: Emory strain Em-36-1


title: Em-32-4 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65800.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1760, 36210; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-12; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 500; Parameter Laser on time = 75146; Parameter Laser Power = 3.48; Parameter Scan Time = 08:41:29; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 32.61; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-12; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 620; Parameter Scan Power = 100; Parameter Laser on time = 75574; Parameter Laser Power = 3.72; Parameter Scan Time = 08:41:29; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 32.61; Performer: Nina,,Salama

tag: Emory strain Em-32-4


title: Em-12-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65758.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1360, 8800; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 550; Parameter Laser on time = 75855; Parameter Laser Power = 3.45; Parameter Scan Time = 15:41:10; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.07; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 550; Parameter Scan Power = 100; Parameter Laser on time = 76283; Parameter Laser Power = 3.75; Parameter Scan Time = 15:41:10; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.07; Performer: Nina,,Salama

tag: Emory strain Em-12-2


title: Em-24-4

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65784.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1690, 34810; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-11; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 650; Parameter Laser on time = 68596; Parameter Laser Power = 3.44; Parameter Scan Time = 14:26:35; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.48; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-11; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 740; Parameter Scan Power = 100; Parameter Laser on time = 68622; Parameter Laser Power = 3.66; Parameter Scan Time = 14:26:35; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.48; Performer: Nina,,Salama

tag: Emory strain Em-24-4


title: Em-30-3 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65796.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1020, 35470; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-12; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 540; Parameter Laser on time = 75123; Parameter Laser Power = 3.47; Parameter Scan Time = 08:18:56; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 32.19; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-12; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 600; Parameter Scan Power = 100; Parameter Laser on time = 75552; Parameter Laser Power = 3.69; Parameter Scan Time = 08:18:56; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 32.19; Performer: Nina,,Salama

tag: Emory strain Em-30-3


title: Em-45-4

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2008-10/81726.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1520, 35230; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 30.75; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 30.75; Performer: Nina,,Salama

tag: Emory strain Em-45-4


title: Em-19-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65774.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1160, 35550; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-05; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 490; Parameter Laser on time = 74892; Parameter Laser Power = 3.43; Parameter Scan Time = 09:55:24; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 25.69; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-05; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 560; Parameter Scan Power = 100; Parameter Laser on time = 75283; Parameter Laser Power = 3.51; Parameter Scan Time = 09:55:24; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 25.69; Performer: Nina,,Salama

tag: Emory strain Em-19-2


title: Em-33-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65803.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1090, 35860; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-14; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 480; Parameter Laser on time = 73149; Parameter Laser Power = 3.44; Parameter Scan Time = 13:23:12; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.35; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-14; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 560; Parameter Scan Power = 100; Parameter Laser on time = 73409; Parameter Laser Power = 3.76; Parameter Scan Time = 13:23:12; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.35; Performer: Nina,,Salama

tag: Emory strain Em-33-1


title: Em38-1-j14

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2007-09/76846.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 2520, 9560; Software: type: feature extraction; Performer: Nina,,Salama

tag: Emory strain Em38-1-j14


title: Em-9-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65858.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 960, 9280; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 470; Parameter Laser on time = 73429; Parameter Laser Power = 3.47; Parameter Scan Time = 12:37:10; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.35; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 550; Parameter Scan Power = 100; Parameter Laser on time = 73689; Parameter Laser Power = 3.76; Parameter Scan Time = 12:37:10; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.35; Performer: Nina,,Salama

tag: Emory strain Em-9-2


title: Em-27-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65786.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1400, 33960; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-08-31; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 510; Parameter Laser on time = 71733; Parameter Laser Power = 3.47; Parameter Scan Time = 11:22:52; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 27.36; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-08-31; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 550; Parameter Scan Power = 100; Parameter Laser on time = 71884; Parameter Laser Power = 3.56; Parameter Scan Time = 11:22:52; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 27.36; Performer: Nina,,Salama

tag: Emory strain Em-27-2


title: Em-39-2 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65819.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1860, 35000; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.1; Parameter Scan Power = 100; Parameter PMT Volts = 540; Parameter Laser on time = 75251; Parameter Laser Power = 3.46; Parameter Scan Time = 09:19:36; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.47; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.1; Parameter Pixel Size = 10; Parameter PMT Volts = 650; Parameter Scan Power = 100; Parameter Laser on time = 75679; Parameter Laser Power = 3.76; Parameter Scan Time = 09:19:36; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.47; Performer: Nina,,Salama

tag: Emory strain Em-39-2


title: Em-14-2 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65763.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1480, 35230; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-22; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 570; Parameter Laser on time = 67932; Parameter Laser Power = 3.50; Parameter Scan Time = 14:13:52; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.64; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-22; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 660; Parameter Scan Power = 100; Parameter Laser on time = 67990; Parameter Laser Power = 3.71; Parameter Scan Time = 14:13:52; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.64; Performer: Nina,,Salama

tag: Emory strain Em-14-2


title: Em-17-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65768.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1330, 8970; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-29; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 470; Parameter Laser on time = 74669; Parameter Laser Power = 3.46; Parameter Scan Time = 15:52:02; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 34.20; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-29; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 560; Parameter Scan Power = 100; Parameter Laser on time = 75060; Parameter Laser Power = 3.83; Parameter Scan Time = 15:52:02; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 34.20; Performer: Nina,,Salama

tag: Equimolar mix of strains 26695/J99

tag: Emory strain Em-17-1


title: Em-6-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65852.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 780, 34860; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 500; Parameter Laser on time = 73409; Parameter Laser Power = 3.46; Parameter Scan Time = 11:27:53; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.41; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 620; Parameter Scan Power = 100; Parameter Laser on time = 73669; Parameter Laser Power = 3.75; Parameter Scan Time = 11:27:53; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.41; Performer: Nina,,Salama

tag: Reference DNA

tag: Emory strain Em-6-1


title: Em-18-3

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65772.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1020, 35630; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-29; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 490; Parameter Laser on time = 74675; Parameter Laser Power = 3.46; Parameter Scan Time = 15:58:18; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 34.23; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-29; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 550; Parameter Scan Power = 100; Parameter Laser on time = 75066; Parameter Laser Power = 3.83; Parameter Scan Time = 15:58:18; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 34.23; Performer: Nina,,Salama

tag: Test Strain

tag: Emory strain Em-18-3


title: Em41-2-new-dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2007-09/76850.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 2135, 36730; Software: type: feature extraction; Performer: Nina,,Salama

source_name: 500 ng EM41-2-new-dupl

tag: Emory strain Em41-2-new-dupl


title: Em-29-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65793.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1800, 8480; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-13; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 660; Parameter Laser on time = 68881; Parameter Laser Power = 3.53; Parameter Scan Time = 12:43:45; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.55; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-13; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 810; Parameter Scan Power = 100; Parameter Laser on time = 68907; Parameter Laser Power = 3.65; Parameter Scan Time = 12:43:45; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.55; Performer: Nina,,Salama

tag: Emory strain Em-29-2


title: Em42-1-new

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2007-09/76851.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 2160, 36880; Software: type: feature extraction; Performer: Nina,,Salama

tag: Emory strain Em42-1-new


title: Em-10-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65753.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1400, 8990; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-20; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 460; Parameter Laser on time = 67896; Parameter Laser Power = 3.60; Parameter Scan Time = 11:37:36; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.51; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-20; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 600; Parameter Scan Power = 100; Parameter Laser on time = 67954; Parameter Laser Power = 3.71; Parameter Scan Time = 11:37:36; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.51; Performer: Nina,,Salama

tag: Emory strain Em-10-1


title: Em38-1-j14-dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2007-09/76847.gif

tag: Emory strain Em38-1-j14-dupl


title: Em-36-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65813.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1470, 8650; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 570; Parameter Laser on time = 75270; Parameter Laser Power = 3.47; Parameter Scan Time = 09:40:09; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.74; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 670; Parameter Scan Power = 100; Parameter Laser on time = 75698; Parameter Laser Power = 3.77; Parameter Scan Time = 09:40:09; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.74; Performer: Nina,,Salama

tag: Emory strain Em-36-1


title: Em42-1-new-dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2007-09/76852.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1880, 9770; Software: type: feature extraction; Performer: Nina,,Salama

source_name: 500 ng EM42-1-new-dupl

tag: Emory strain Em42-1-new-dupl


title: Em-35-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65809.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1310, 8890; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 550; Parameter Laser on time = 75254; Parameter Laser Power = 3.46; Parameter Scan Time = 09:23:33; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.53; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 650; Parameter Scan Power = 100; Parameter Laser on time = 75683; Parameter Laser Power = 3.76; Parameter Scan Time = 09:23:33; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.53; Performer: Nina,,Salama

tag: Emory strain Em-35-1


title: Em-29-1 trpl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65792.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1570, 8490; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-23; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 540; Parameter Laser on time = 76179; Parameter Laser Power = 3.44; Parameter Scan Time = 12:12:55; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 34.02; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-23; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 590; Parameter Scan Power = 100; Parameter Laser on time = 76607; Parameter Laser Power = 3.76; Parameter Scan Time = 12:12:55; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 34.02; Performer: Nina,,Salama

tag: Emory strain Em-29-1


title: Em-43-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65831.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1660, 35500; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-21; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 440; Parameter Laser on time = 69462; Parameter Laser Power = 3.44; Parameter Scan Time = 09:51:52; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.12; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-21; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 600; Parameter Scan Power = 100; Parameter Laser on time = 69487; Parameter Laser Power = 3.64; Parameter Scan Time = 09:51:52; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.12; Performer: Nina,,Salama

tag: Emory strain Em-43-2


title: Em41-2-new

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2007-09/76849.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 2400, 9850; Software: type: feature extraction; Performer: Nina,,Salama

tag: Emory strain Em41-2-new


title: Em-23-4

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65782.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1550, 36100; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-05; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 500; Parameter Laser on time = 74919; Parameter Laser Power = 3.48; Parameter Scan Time = 10:22:56; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 27.79; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-05; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 600; Parameter Scan Power = 100; Parameter Laser on time = 75310; Parameter Laser Power = 3.55; Parameter Scan Time = 10:22:56; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 27.79; Performer: Nina,,Salama

tag: Equimolar mix of strains 26695/J99

tag: Emory strain Em-23-4


title: Em-12-2 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2008-10/81729.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1360, 8560; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.1; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.47; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.1; Parameter Pixel Size = 10; Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.47; Performer: Nina,,Salama

tag: Reference DNA

tag: Emory strain Em-12-2


title: Em-7-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65855.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1830, 34550; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-20; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 460; Parameter Laser on time = 67878; Parameter Laser Power = 3.63; Parameter Scan Time = 11:19:13; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.33; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-20; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 610; Parameter Scan Power = 100; Parameter Laser on time = 67936; Parameter Laser Power = 3.70; Parameter Scan Time = 11:19:13; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.33; Performer: Nina,,Salama

tag: Test Strain

tag: Emory strain Em-7-1


title: Em-41-2 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65823.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1560, 35060; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 540; Parameter Laser on time = 75220; Parameter Laser Power = 3.45; Parameter Scan Time = 08:49:03; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.01; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 610; Parameter Scan Power = 100; Parameter Laser on time = 75649; Parameter Laser Power = 3.74; Parameter Scan Time = 08:49:03; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.01; Performer: Nina,,Salama

tag: Emory strain Em-41-2


title: Em-50-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65846.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1790, 8680; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-22; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 580; Parameter Laser on time = 76014; Parameter Laser Power = 3.45; Parameter Scan Time = 11:30:28; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.13; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-22; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 590; Parameter Scan Power = 100; Parameter Laser on time = 76443; Parameter Laser Power = 3.75; Parameter Scan Time = 11:30:28; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.13; Performer: Nina,,Salama

tag: Emory strain Em-50-1


title: Em-48-3 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65842.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1330, 35080; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-28; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 490; Parameter Laser on time = 75762; Parameter Laser Power = 3.46; Parameter Scan Time = 13:34:17; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.68; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-28; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 610; Parameter Scan Power = 100; Parameter Laser on time = 76191; Parameter Laser Power = 3.77; Parameter Scan Time = 13:34:17; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.68; Performer: Nina,,Salama

tag: Emory strain Em-48-3


title: Em-35-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65808.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1410, 34280; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-15; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 500; Parameter Laser on time = 68960; Parameter Laser Power = 3.44; Parameter Scan Time = 14:09:05; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.79; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-15; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 580; Parameter Scan Power = 100; Parameter Laser on time = 68986; Parameter Laser Power = 3.71; Parameter Scan Time = 14:09:05; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.79; Performer: Nina,,Salama


title: Em-39-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65818.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1480, 35140; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-15; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 500; Parameter Laser on time = 68973; Parameter Laser Power = 3.44; Parameter Scan Time = 14:20:39; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.94; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-15; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 560; Parameter Scan Power = 100; Parameter Laser on time = 68998; Parameter Laser Power = 3.71; Parameter Scan Time = 14:20:39; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.94; Performer: Nina,,Salama

tag: Emory strain Em-39-2


title: Em-11-1 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65757.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1400, 35180; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-22; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 580; Parameter Laser on time = 67922; Parameter Laser Power = 3.49; Parameter Scan Time = 14:03:56; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.51; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-22; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 670; Parameter Scan Power = 100; Parameter Laser on time = 67980; Parameter Laser Power = 3.69; Parameter Scan Time = 14:03:56; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.51; Performer: Nina,,Salama

tag: Emory strain Em-11-1


title: Em-13-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65760.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 520, 34710; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-08-26; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 470; Parameter Laser on time = 71654; Parameter Laser Power = 3.45; Parameter Scan Time = 14:51:18; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.76; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-08-26; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 630; Parameter Scan Power = 100; Parameter Laser on time = 71791; Parameter Laser Power = 3.70; Parameter Scan Time = 14:51:18; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.76; Performer: Nina,,Salama

tag: Emory strain Em-13-1


title: Em-33-1 trpl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65805.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1870, 34870; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-22; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 620; Parameter Laser on time = 75999; Parameter Laser Power = 3.45; Parameter Scan Time = 11:14:30; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.04; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-11-22; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 620; Parameter Scan Power = 100; Parameter Laser on time = 76428; Parameter Laser Power = 3.74; Parameter Scan Time = 11:14:30; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.04; Performer: Nina,,Salama

tag: Emory strain Em-33-1


title: Em-8-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65856.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 800, 35540; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 510; Parameter Laser on time = 73421; Parameter Laser Power = 3.47; Parameter Scan Time = 12:29:10; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.32; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-09-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 600; Parameter Scan Power = 100; Parameter Laser on time = 73682; Parameter Laser Power = 3.75; Parameter Scan Time = 12:29:10; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.32; Performer: Nina,,Salama

tag: Emory strain Em-8-1


title: Em-44-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65833.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1520, 9040; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-25; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 490; Parameter Laser on time = 69832; Parameter Laser Power = 3.54; Parameter Scan Time = 10:33:01; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 30.36; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-25; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 500; Parameter Scan Power = 100; Parameter Laser on time = 69858; Parameter Laser Power = 3.63; Parameter Scan Time = 10:33:01; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 30.36; Performer: Nina,,Salama

tag: Emory strain Em-44-1


title: Em-5-3 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65851.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1270, 34790; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-16; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 480; Parameter Laser on time = 67645; Parameter Laser Power = 3.49; Parameter Scan Time = 11:52:37; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.91; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-06-16; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 500; Parameter Scan Power = 100; Parameter Laser on time = 67703; Parameter Laser Power = 3.73; Parameter Scan Time = 11:52:37; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.91; Performer: Nina,,Salama

tag: Emory strain Em-5-3


title: Em-43-2 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65832.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1400, 8710; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-28; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 450; Parameter Laser on time = 75740; Parameter Laser Power = 3.46; Parameter Scan Time = 12:38:38; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.56; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-28; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 570; Parameter Scan Power = 100; Parameter Laser on time = 76168; Parameter Laser Power = 3.77; Parameter Scan Time = 12:38:38; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.56; Performer: Nina,,Salama

tag: Emory strain Em-43-2


title: Em-37-4 dupl

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65815.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1390, 35000; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 570; Parameter Laser on time = 75263; Parameter Laser Power = 3.47; Parameter Scan Time = 09:33:13; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.62; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-21; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 670; Parameter Scan Power = 100; Parameter Laser on time = 75692; Parameter Laser Power = 3.77; Parameter Scan Time = 09:33:13; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 33.62; Performer: Nina,,Salama

tag: Equimolar mix of strains 26695/J99

tag: Emory strain Em-37-4


title: Em-22-2

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65780.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1100, 9510; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-05; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 510; Parameter Laser on time = 74909; Parameter Laser Power = 3.61; Parameter Scan Time = 10:12:59; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 27.06; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-10-05; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 560; Parameter Scan Power = 100; Parameter Laser on time = 75300; Parameter Laser Power = 3.55; Parameter Scan Time = 10:12:59; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 27.06; Performer: Nina,,Salama

tag: Reference DNA

tag: Emory strain Em-22-2


title: Em-49-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65843.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 440, 34560; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-08-26; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 510; Parameter Laser on time = 71628; Parameter Laser Power = 3.45; Parameter Scan Time = 13:00:26; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.79; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-08-26; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 520; Parameter Scan Power = 100; Parameter Laser on time = 71765; Parameter Laser Power = 3.71; Parameter Scan Time = 13:00:26; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.79; Performer: Nina,,Salama

tag: Test Strain

tag: Emory strain Em-49-1


title: Em-40-1

description:
Simple annotation: Genomic DNA, Strain Comparison
Image: http://smd.stanford.edu/MicroArray/gifs/2005-12/65820.gif

scan_protocol: Feature Extraction; Software and parameters for feature extraction.; Protocol Type = Feature Extraction; Parameter Datafile type = GenePix Results 3; Parameter Image Origin = 1480, 8640; Software: type: feature extraction; Performer: Nina,,Salama Scanning parameters - Channel 1; Parameters for laser scanning of a hybridized array in channel 1.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-20; Parameter Scanning software = AxImageIO; Parameter Pixel Size = 10; Parameter Scanning software version = 2.0.3.0; Parameter Scan Power = 100; Parameter PMT Volts = 550; Parameter Laser on time = 69107; Parameter Laser Power = 3.47; Parameter Scan Time = 10:21:44; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.00; Performer: Nina,,Salama Scanning parameters - Channel 2; Parameters for laser scanning of a hybridized array in channel 2.; Protocol Type = Scanning parameters; Parameter Scan Date = 2005-07-20; Parameter Scanning software = AxImageIO; Parameter Scanning software version = 2.0.3.0; Parameter Pixel Size = 10; Parameter PMT Volts = 550; Parameter Scan Power = 100; Parameter Laser on time = 69132; Parameter Laser Power = 3.63; Parameter Scan Time = 10:21:44; Parameter Scanner Make = Axon Instruments (V1.00); Parameter Scanner Model = GenePix 4000B [92865]; Parameter Focus Position = 0; Parameter Scan Temperature = 31.00; Performer: Nina,,Salama

tag: Emory strain Em-40-1