title: Hom pool-5 generations rich media control-replicate 2 Up

description: Up tag data processing


title: JLMy82-2s microarray

status: Public on Sep 03 2009

type: genomic

city: Durham

first: Jennifer

middle: Lynn

last: McCulley

state: NC

address: 374 CARL Building, Research Drive Box 3054

department: Molecular Genetics and Microbiology

country: USA

institute: Duke University

description: JLMy82-2s microarray

hyb_protocol: Described in Lemoine, F. et al. Cell, Vol. 120, 587-598 (2005).

scan_protocol: Array scanned in Genepix 4000b scanner.

data_processing: The log2 R/G ratios for all probes in the array were collapsed to a single value in the case of repeated probes and normalized according to the median value for the entire array.

molecule: genomic DNA

organism: Saccharomyces cerevisiae

source_name: Chromosomal DNA from the experimental strain labeled with Cy5

label_protocol: Direct incorporation with klenow polymerase and random priming.

growth_protocol: All strains were grown at 30 degrees Celcius for the number of generations indicated.

extract_protocol: Genomic DNA was harvested with a standard yeast DNA extraction protocol.

treatment_protocol: Strains were not treated with exogenous chemicals, etc.

tag: strain

tag: ploidy

value: Diploid

tag: isogenicity

value: Isogenic to MS71

tag: generations subcultured

source_name: Chromosomal DNA from MS71 labeled with Cy3

value: Haploid


title: JLMy82-1s microarray

description: JLMy82-1s microarray


title: JLMy82-3L microarray

description: JLMy82-3L microarray


title: JLMy81-4s microarray

description: JLMy81-4s microarray


title: JLMy81-5L microarray

description: JLMy81-5L microarray


title: JLMy81-3s microarray

description: JLMy81-3s microarray


title: JLMy81-2s microarray

description: JLMy81-2s microarray


title: JLMy81-1L microarray

description: JLMy81-1L microarray


title: JLMy80-2s microarray

description: JLMy80-2s microarray


title: JLMy80-4L microarray

description: JLMy80-4L microarray


title: JLMy80-5L microarray

description: JLMy80-5L microarray


title: JLMy80-1s microarray

description: JLMy80-1s microarray


title: JLMy80-3L microarray

description: JLMy80-3L microarray


title: 07R058 RA

type: RNA

city: Evry

first: Robert

last: Olaso

address: 2 rue gaston cremieux

department: CNG Technology Department

country: France

institute: CEA IG

hyb_protocol: Standard Illumina hybridization protocol

scan_protocol: Standard Illumina scanning protocol

data_processing: The data were normalised using quantile normalisation with Beadstudio

label: biotin

molecule: total RNA

organism: Homo sapiens

source_name: Peripheral Mononuclear Blood Cells

label_protocol: Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplification kit for Illumina arrays

extract_protocol: Total RNA was isolated from Peripheral Blood using the PAXgene RNA isolation kit (PreAnalytix, GmbH, Germany). Total RNA yield (ng) was determined spectrophotometrically using the NanoDrop ND-1000 (Wilmington). Total RNA profile was determined using the Bioanalyzer 2100 (Agilent).

tag: status

value: Rheumatoid Arthritis Patient

tag: gender

value: Male

tag: age

tag: tissue

value: Blood


title: 06R030 RA

value: Female


title: 07R084 Control

value: Control


title: 06R031 Control


title: C57BL6/J-mouse hepatocytes 10nM TCDD treated biological rep3

city: Univeristy Park

first: Gary

middle: H

last: Perdew

state: PA

address: 309A Life Sciences Building

institute: The Pennsylvania State University

description: Gene expression data from 10nM TCDD treated C57BL6/J mouse hepatocytes

hyb_protocol: Following fragmentation, 10ug of cRNA were hybridized for 16h at 45C on GeneChip Mouse Genome 430_2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.

data_processing: GeneChip® Operating Software was used to preprocess CAB/CEL files generated (Affymetrix Expression Console Software 1.1). Arrays were normalized using the Probe Logarithmic intensity Error Approximation MM algorithm (PLIER-MM) with default settings.

organism: Mus musculus

source_name: TCDD treated C57BL6/J mouse hepatocytes

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

growth_protocol: Primary hepatocytes were grown for 48h in long-term hepatocyte culture media [Hepatozyme-SFM (Invitrogen), 2.5% dimethyl sulfoxide, 10 nM dexamethasone, 100 IU/ml penicillin, and 100 µg/ml streptomycin] in a 37°C incubator at 5% CO2.

extract_protocol: Tri-reagent extraction of total RNA was performed according to the manufacturer's instructions with additional purification using RNeasy mini columns (Qiagen).

treatment_protocol: Hepatocytes were treated with 10nM TCDD (2,3,7,8-Tetrachlorodibenzo-p-dioxin) or DMSO vehicle control for 6h.

tag: genome/variation

value: wild type

tag: tissue type

value: liver

tag: cell type

value: hepatocytes


title: 07R057 RA


title: 06R052 Control


title: 07R065 RA


title: 06R017 Control


title: 07R055 RA


title: 06R044 Control


title: 07R054 RA


title: 07R059 RA


title: 06R028 RA


title: 06R038 Control


title: C57BL6/J-mouse hepatocytes 10nM TCDD treated biological rep1


title: 07R060 RA


title: 06R009 Control


title: 06R016 Control


title: C57BL6/J-mouse hepatocytes DMSO treated biological rep2

description: Gene expression data from 10nM DMSO treated C57BL6/J mouse hepatocytes

source_name: Control treated C57BL6/J hepatocytes


title: C57BL6/J-mouse hepatocytes 10nM TCDD treated biological rep2


title: C57BL6/J-mouse hepatocytes DMSO treated biological rep1


title: 06R029 RA


title: 07R083 RA


title: 06R041 RA


title: C57BL6/J-mouse hepatocytes DMSO treated biological rep3


title: mth1/std1 deletion strain vs. WT in Gal. rep 1

city: Saint Louis

first: Jeffrey

last: Sabina

address: 4444 Forest Park Blvd.

department: Genetics

institute: Washington University in Saint Louis

hyb_protocol: The Microarray Core facility at Washington University performed hybridization.

scan_protocol: Scanning was performed using a Scan Express HT scanner (Perkin Elmer).

data_processing: The LOWESS algorithm was used for normalization of each array.

source_name: WT diploid strain BYXXX

label_protocol: Genisphere Array 350 Expression Array Detection Kit

growth_protocol: Each strain was grown to A600 = 1-1.2 in synthetic complete media + 2% galactose, incubated 2h and RNA was extracted using the hot phenol method.

extract_protocol: Total RNA was isolated from cell pellets by hot phenol extraction.

value: BYXXX

source_name: Homozygous, mth1/std1 deletion strain

value: mth1/std1 deletion


title: 07R068 Control


title: std1 deletion strain vs. WT in Gal. rep 2

source_name: Homozygous, std1 deletion strain

value: std1 deletion


title: mth1 deletion strain vs. WT in Gal. rep 1

source_name: Homozygous, mth1 deletion strain

value: mth1 deletion


title: std1 deletion strain vs. WT in Gal. rep 1


title: mth1/std1 deletion strain vs. WT in Gal. rep 2


title: 06R049 RA


title: hAHR-mouse hepatocytes 10nM TCDD treated biological replicate 2

description: Gene expression data from 10nM TCDD treated human AHR expressing mouse hepatocytes

source_name: TCDD treated hAHR-mouse hepatocytes

value: B6.Cg-Ahrtm3.1Bra Tg (Alb-cre, Ttr-AHR)1Ghp

value: Human AHR


title: 06R014 Control


title: hAHR-mouse hepatocytes 10nM TCDD treated biological replicate 1


title: hAHR-mouse hepatocytes 10nM TCDD treated biological replicate 3


title: HCMV-infected monocyte pretreated with AG, biological rep4

city: Shreveport

first: Andrew

middle: D.

last: Yurochko

state: LA

address: 1501 Kings Highway

department: Microbiology & Immunology

institute: LSUHSC-S

hyb_protocol: Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on the GeneChip Human U95Av2 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Affymetrix GeneChip Scanner 3000

data_processing: The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling with a target intensity value of 2500 as normalization method.

source_name: HCMV-infected monocyte pretreated with AG at 4 hours post infection

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

growth_protocol: Monocytes were incubated in RPMI supplemented with 10% human AB serum at 37C and 5% CO2.

extract_protocol: RNA STAT-60 extraction of total RNA was performed according to the manufacturer's instructions.

treatment_protocol: Isolated monocytes were pretreated nonadherently at 37C for 60 min with 10μg/ml of anti-EGFR antibody or 1 μM of the EGFR inhibitor AG1478 prior to infection.  Cells were then HCMV infected (MOI 5) and incubated nonadherently at 37C for 24 hours.

value: peripheral blood

value: monocytes

tag: human cytomegalovirus strain

value: Towne/E

tag: pretreatment

value: AG

tag: infection

value: HCMV


title: 07R069 Control

value: Male

value: Blood


title: HCMV-infected monocyte pretreated with AG, biological rep3


title: HCMV-infected monocyte pretreated with AG, biological rep2


title: 06R025 RA

value: Rheumatoid Arthritis Patient

value: Female


title: mth1 deletion strain vs. WT in Gal. rep 2


title: hAHR-mouse hepatocytes DMSO treated biological rep 1

description: Gene expression data from DMSO treated human AHR expressing mouse hepatocytes

source_name: Control treated hAHR-mouse hepatocytes

value: liver


title: 06R004 Control

value: Control


title: HCMV-infected monocyte pretreated with AG, biological rep1


title: hAHR-mouse hepatocytes DMSO treated biological rep 2

value: hepatocytes


title: HCMV-infected monocyte pretreated with anti-EGFR, biological rep2

source_name: HCMV-infected monocyte pretreated with anti-EGFR antibody at 4 hours post infection

value: anti-EGFR antibody


title: hAHR-mouse hepatocytes DMSO treated biological rep 3


title: HCMV-infected monocyte pretreated with anti-EGFR, biological rep3


title: HCMV-infected monocyte pretreated with anti-EGFR, biological rep4


title: 06R033 Control


title: 06R022 RA


title: HCMV-infected monocyte pretreated with anti-EGFR, biological rep1


title: HCMV-infected monocyte, biological rep4

source_name: HCMV-infected monocytes at 4 hours post infection


title: 07R062 Control


title: HCMV-infected monocyte, biological rep3


title: Acute myeloid leukemia in remission Reference-#45-50kxba

status: Public on Sep 02 2009

city: Memphis

first: Charles

middle: G

last: Mullighan

state: TN

address: 262 Danny Thomas Place

department: Pathology

institute: St Jude Children's Research Hospital

description: Acute myeloid leukemia in remission

hyb_protocol: As per manufacturer (Affymetrix)

scan_protocol: As per manufacturer (Affymetrix)

data_processing: CEL files and TXT files (generated by Affymetrix GTYPE using the DM algorithm) were processed by dChip and model-based expression performed using the PM/MM model. Normalization was performed using the reference normalization algorithm developed at St Jude and described in Mullighan et al Nature 2007;446:758. The data matrix contains the normalized expression values produced by that algorithm.

label: Biotin

source_name: Bone marrow or peripheral blood

label_protocol: As per manufacturer (Affymetrix)

growth_protocol: Cryopreserved peripheral blood or bone marrow samples obtained at remission

extract_protocol: Qiagen DNA blood mini

treatment_protocol: Samples were obtained at different stages of disease

tag: Bone marrow or peripheral blood


title: Acute myeloid leukemia in remission Reference-#48-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#49-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#46-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#47-50kxba

description: Acute myeloid leukemia in remission


title: HCMV-infected monocyte, biological rep1


title: mock-infected monocyte, biological rep4

source_name: Mock-infected monocytes at 4 hours post infection


title: 5796 KSR2-/- Mouse White Adipose Tissue

city: Omaha

last: Lewis

state: NE

address: 12706 Lied Transplant Center

institute: Univ. of Nebraska Medical Center

description: Expression analysis of white adipose tissue from a KSR2-/- mouse.

hyb_protocol: Resultant cRNA probes were hybridized to the Affymetrix (Santa Clara, CA) Mouse Genome 430 2.0 Array per manufacturer's suggestion.

scan_protocol: Following washing and staining, the chips were scanned using a GeneChip Scanner 3,000 6 G in the UNMC microarray core facility

data_processing: Raw .cel files were processed using Robust Multichip Average (RMA) from GenePattern Software to create a .res file that was subjected to further analysis.

source_name: white adipose tissue, KSR2-/-

label_protocol: 2.5 ug of total RNA was reverse-transcribed and cRNA generated per Affymetrix instructions using the Affymetrix 1-cycle Target Labeling Kit.

extract_protocol:
1)  Place freshly isolated tissue directly in TriReagent (1ml/50-100mg of tissue).
2)  Immediately homogenize tissue and transfer to a sterile 50 ml centrifuge tube.
3)  Cap the tube securely, shake, vortex vigorously, and incubate at room temperature 5 min. to assure dissociation of nucleoproteins.
4)  Add 0.1 ml BCP/ ml of TriReagent used.  Cap the tube, shake, and vortex.  Incubate at RT for 10 min.  Centrifuge at 3200 rpm in Sorvall tabletop centrifuge or equivalent (1800 g) for 30 min. at 40 C.
5)  Of the three phases seen, RNA remains in the topmost aqueous phase.  Transfer the aqueous layer to a fresh tube being careful not to disturb the protein-rich interface.
6)  Precipitate the RNA by adding isopropanol (molecular biology grade) at 0.5 ml / ml TriReagent used.  Shake vigorously, vortex, and leave at room temperature 10-15 min.
7)  Centrifuge at 3200 rpm for 45 min. to one hour at 40 C.
8)  Decant the isopropanol and wash the pellet gently with 10ml ice cold 75% ethanol (made with 100% ethanol (molecular biology grade) and HPLC grade-H2O).  Centrifuge at 3200rpm for 20 min. at 4ºC.
9) Carefully decant the ETOH.  Draw off the last with a pipet and allow excess ethanol to evaporate 5-10 min.  Do not permit the pellet to completely dry as this will decrease its solubility.

10) Bring the volume of the sample up to 250ul (or appropriate volume) with HPLC-H20.  Transfer the RNA sample to a 1.5ml microfuge tube.
11) Add 625μl (2.5X original volume) 100% ice cold ethanol.
12) Add 25μl (0.1X original volume) 3M sodium acetate, pH 5.2.
13) Mix well and place in -200C freezer for 30-60 minutes.
14) Microcentrifuge at top speed for 20-30 min. at 4º C.
15) Decant the ethanol mixture and wash the RNA pellet with 100μl 75% ethanol. Spin at top speed of microfuge for 10 minutes at room temperature.   Draw off the supernatant with pipet and repeat the wash step.  After drawing off the second 75% wash, invert the tube 5-10 min. to partially dry the sample.  Do not completely dry the RNA pellet as this will decrease its solubility.
16) Resuspend in an appropriate amount of HPLC-H2O, depending on the size of the pellet.

value: female

value: 6 months

value: white adipose tissue

tag: genotype


title: 6169 Wild Type Mouse White Adipose Tissue

description: Expression analysis of white adipose tissue from a wild type mouse.

source_name: white adipose tissue, wild type

value: WT


title: mock-infected monocyte, biological rep3

value: peripheral blood


title: 06R006 Control


title: 06R024 RA


title: HCMV-infected monocyte, biological rep2

value: monocytes


title: 06R019 RA


title: mock-infected monocyte, biological rep2

value: Towne/E


title: mock-infected monocyte, biological rep1


title: Acute myeloid leukemia in remission Reference-#42-50kxba

description: Acute myeloid leukemia in remission


title: 5720 Wild Type Mouse White Adipose Tissue


title: 06R021 RA


title: 6112 KSR2-/- Mouse White Adipose Tissue


title: Acute myeloid leukemia in remission Reference-#44-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#43-50kxba

description: Acute myeloid leukemia in remission


title: 6114 KSR2-/- Mouse White Adipose Tissue


title: 6171 Wild Type Mouse White Adipose Tissue


title: Acute myeloid leukemia in remission Reference-#40-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#41-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#35-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#38-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#31-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#37-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#34-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#32-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#29-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#26-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#28-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#25-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#27-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#24-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#22-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#21-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#36-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#19-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#23-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#15-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#17-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#16-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#14-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#18-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#53-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#9-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#12-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#52-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#6-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#51-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#5-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#2-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#13-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#4-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#1-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#50-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#62-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#60-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#20-50kxba

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#58-50kxba

description: Acute myeloid leukemia in remission


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#39-50kxba

source_name: Diagnostic acute leukemia blasts

growth_protocol: Cryopreserved peripheral blood or bone marrow samples obtained at diagnosis

extract_protocol: Qiagen DNA blood mini or phenol chloroform

tag: Tissue

value: acute lymphoblastic leukemia


title: Diagnostic_acute_leukemia T-ALL-SNP-#50-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#23-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#17-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#47-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#11-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#16-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#15-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#49-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#38-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#46-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#10-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#47-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#48-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#22-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#48-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#10-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#20-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#46-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#16-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#20-50kxba


title: Acute myeloid leukemia in remission Reference-#7-50kxba

description: Acute myeloid leukemia in remission


title: Diagnostic_acute_leukemia Other-SNP-#15-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#7-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#21-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#45-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#44-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#19-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#19-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#44-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#43-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#9-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#20-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#45-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#8-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#37-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#18-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#14-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#41-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#42-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#36-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#14-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#13-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#43-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#42-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#39-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#40-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#12-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#35-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#19-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#8-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#41-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#13-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#18-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#40-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#32-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#38-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#33-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#40-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#17-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#31-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#37-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#9-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#12-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#34-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#17-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#9-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#36-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#11-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#39-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#11-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#30-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#35-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#7-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#16-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#15-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#10-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#6-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#28-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#10-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#37-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#16-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#18-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#36-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#5-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#8-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#26-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#33-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#27-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#14-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#31-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#33-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#34-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#35-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#38-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#13-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#31-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#29-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#32-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#25-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#30-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#8-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#24-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#9-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#32-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#24-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#23-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#7-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#12-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#22-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#24-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#28-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#7-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#23-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#27-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#30-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#26-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#6-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#27-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#29-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#29-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#26-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#21-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#17-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#25-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#28-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#11-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#20-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#6-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#9-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#14-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#10-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#19-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#34-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#9-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#25-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#22-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#23-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#12-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#5-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#8-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#23-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#24-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#17-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#11-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#5-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#18-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#20-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#21-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#10-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#9-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#24-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#8-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#4-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#8-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#4-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#19-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#4-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#15-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#18-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#3-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#22-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#7-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#17-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#21-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#3-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#13-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#20-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#2-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#19-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#7-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#15-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#18-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#5-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#16-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#6-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#7-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#17-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#12-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#14-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#11-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#14-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#3-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#6-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#5-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#2-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#6-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#16-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#15-50kxba


title: Diagnostic_acute_leukemia MLL-SNP-#1-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#15-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#5-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#9-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#10-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#4-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#14-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#13-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#4-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#3-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#12-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#2-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#7-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#8-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#6-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#9-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#13-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#3-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#5-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#5-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#6-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#8-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#12-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#13-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#11-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#2-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#4-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#9-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#22-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#4-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#11-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#7-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#10-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#16-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#6-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#10-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#4-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#2-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#3-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#5-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#8-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#3-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#7-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#4-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#6-50kxba


title: Diagnostic_acute_leukemia Hypodip-SNP-#1-50kxba


title: Diagnostic_acute_leukemia E2A-PBX1-SNP-#1-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#2-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#5-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#2-50kxba


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#1-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#2-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#3-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#2-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#1-50kxba


title: Diagnostic_acute_leukemia T-ALL-SNP-#3-50kxba


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#2-50kxba


title: Diagnostic_acute_leukemia Other-SNP-#1-50kxba


title: Diagnostic_acute_leukemia Pseudodip-SNP-#1-50kxba


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#1-50kxba


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#1-50kxba


title: AD5_3

city: Ames

first: Lex

last: Flagel

state: IA

address: 251 Bessey Hall

institute: Iowa State Univ.

hyb_protocol: Hybridization was performed by NimbleGen Systems Inc., Madison, WI, USA following their standard operating protocol. See www.nimblegen.com.

scan_protocol: Scanning was performed by NimbleGen Systems Inc., Madison, WI USA, following their standard operating protocol. See www.nimblegen.com.

data_processing: log transformation followed by quantile normalization and Tukey's biweight to average across mulitple probes from same transcript; implemented in R 2.7.0

organism: Gossypium darwinii

source_name: bulk of >3 petals from a single plant, 0 days post anthesis (the day of flower opening)

label_protocol: Labeling was performed using Cy3 by NimbleGen Systems Inc., Madison, WI USA, following their standard operating protocol. See www.nimblegen.com.

growth_protocol: 50% Canadian Spagum Peat : 40% Coarse Perlite : 10% Mineral Soil; sun and 10 hour day sodium supplemental lighting @ Pohl Conservatory Iowa State Univ.; harvest at maturity (20+ weeks)

extract_protocol: Hot-borate / Li precipitation method (see: Wan & Wilkins. 1994. Analytical Biochemistry 223: 7-12.)

tag: species type

value: :tetraploid

tag: accession


title: Mix_1

description: 1:1 RNA mix between G. raimondii and G. arboreum

organism: Gossypium

value: :1:1 mix between parental strains


title: Mix_2


title: Mix_3


title: F1_1

description: synthetic F1 hybrid between G. raimondii and G. arboreum

value: :synthetic F1 hybrid


title: AD3_2

organism: Gossypium tomentosum


title: F1_2


title: AD4_2

organism: Gossypium mustelinum


title: AD3_1


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#4-50kxba


title: AD4_3


title: AD5_2


title: AD4_1


title: AD5_1


title: AD2_1

organism: Gossypium barbadense

value: cv. Pima S7


title: AD1_3

organism: Gossypium hirsutum

value: cv. Maxxa


title: AD1_1


title: AD3_3


title: AD2_3


title: AD1_2


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#1-50kxba


title: D5_3

organism: Gossypium raimondii

value: :parental

value: Unamed


title: D5_2


title: AD2_2


title: D5_1

description: Accession Unamed


title: Lymph node–negative breast cancer 7277

city: San Francsico

first: Serena

middle: S

last: kwek

state: CA

address: 2340 Sutter St.

department: Cancer Research Institute

institute: UCSF

hyb_protocol: The test and reference DNAs together with 100 ug human Cot-1 DNA were hybridized to the BAC arrays for ~48 hrs at 37ºC. After post-hybridization washes, the arrays were mounted in a solution containing 90% glycerol, 10% PBS and 1 uM DAPI and sealed with a cover slip.

scan_protocol: A custom built CCD camera system was used to acquire 16 bit 1024x1024 pixel DAPI, Cy3 and Cy5 images (Pinkel et al., 1998 and Hamilton et al. 2006). Image analysis was carried out using UCSF SPOT software (Jain et al., 2002).

data_processing: The log2ratio of the total integrated Cy3 and Cy5 intensities for each spot after background subtraction was calculated, normalized to the median log2ratio of all the clones on the array and the average of the triplicates calculated using a second custom program, SPROC. Automatic data filtering to reject data points based on low DAPI intensity, low correlation between Cy3 and Cy5 within each segmented spot and low reference/DAPI signal intensity was also carried out using SPROC. Data files were subsequently manually edited by rejecting clones for which only one spot of the triplicate survived after SPROC analysis and for which the standard deviation of the log2ratio of the triplicate was >0.2. For each tumor, the data are plotted as the mean log2ratio of the triplicate spots for each clone normalized to the genome median log2ratio. The clones are ordered by position in the genome (UCSC draft genome sequence, July 2003 freeze) beginning at 1p and ending with Xq.

source_name: genomic DNA isolated from lymph node–negative breast cancer

label_protocol: The tumor genomic DNA and normal male reference DNA (300 ng each) were labeled by random priming in separate 50 ul reactions to incorporate Cy3 and Cy5, respectively.

extract_protocol: blocks were trimmed with a razor blade to remove normal tissue and cryosections were obtained from either side of the block to ascertain that tumor cells comprised greater than 70% of the specimen. DNA was extracted using the QUIamp tissue kits (29304, Qiagen)

tag: disease state

value: Lymph node–negative breast cancer

value: breast tumor

source_name: normal male genomic DNA

value: male

value: blood


title: Lymph node–negative breast cancer 5226

value: female


title: Lymph node–negative breast cancer 5683


title: A2_2

organism: Gossypium arboreum

value: cv. AKA 8401


title: Lymph node–negative breast cancer 4445


title: Lymph node–negative breast cancer 3891


title: Lymph node–negative breast cancer 5179


title: Lymph node–negative breast cancer 4953


title: A2_1


title: Lymph node–negative breast cancer 4284


title: Lymph node–negative breast cancer 3372


title: Lymph node–negative breast cancer 1901


title: Lymph node–negative breast cancer 1078


title: Lymph node–negative breast cancer 1163


title: Lymph node–negative breast cancer 1333


title: Lymph node–negative breast cancer 665


title: Lymph node–negative breast cancer 3359


title: Lymph node–negative breast cancer 1358


title: Lymph node–negative breast cancer 1144


title: Lymph node–negative breast cancer 700


title: Ductal invasive breast tumors S1598

source_name: genomic DNA isolated from ductal invasive breast tumors

value: Ductal invasive breast cancer


title: Ductal invasive breast tumors S1539


title: Ductal invasive breast tumors S1534


title: Lymph node–negative breast cancer 363


title: Ductal invasive breast tumors S0131


title: Ductal invasive breast tumors S0132


title: Ductal invasive breast tumors S0127


title: Ductal invasive breast tumors S0065


title: Ductal invasive breast tumors S0021


title: Ductal invasive breast tumors S0050


title: Breast cell line MDAMB134

source_name: genomic DNA isolated from breast cell line

tag: cell line


title: Breast cell line Sum44


title: Breast cell line Sum225


title: Breast cell line BT549


title: Breast cell line Sum52


title: Ductal invasive breast tumors S0081


title: Lymph node–negative breast cancer 415


title: Breast cell line MDAMB175


title: Breast cell line 600MPE


title: Breast cell line BT474


title: Breast cell line MCF7


title: F1_3


title: Breast cell line MCF10A


title: Lymph node–negative breast cancer 416


title: Acute leukemia cell line UOCB1-250ksty

description: Acute leukemia cell line

source_name: Cell line in culture

growth_protocol: Cell lines were grown according to standard conditions.

tag: Cell line in culture


title: Acute leukemia cell line THP-1-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line TOM-1-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line U-937-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line SUPB-15-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line SKNO-1-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line RS4_11-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line SD1-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line Reh-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line YT-250ksty

description: Acute leukemia cell line


title: Control 2

city: Houston

first: Martin

middle: M

last: Matzuk

state: TX

address: One Baylor Plaza

institute: Baylor College of Medicine

description: replicate 2

data_processing: The image data were compiled into a project using  Beadstudio software gene expression module version 3.2.7.  No normalization was used. The data was exported as txt files using the build-in function of export to GeneSpring GX format. The option of sample probe profile was chosen. Data were normalized by shifting to 75 percentile and baseline transformed to the median of all samples.

source_name: Sertoli cells

label_protocol: Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays

extract_protocol: Cells were harvested immediately following fluorescence activated sorting (FACSAriaII cell sorter, BD). Total RNA was extracted using Rneasy Micro Kit (Qiagen). RNA quality was inspected using the QIAxcel System (Qiagen).

value: Rb1 flox/-

tag: strain

value: 6 weeks

value: Sertoli cell


title: Acute leukemia cell line NOMO-1-250ksty

description: Acute leukemia cell line


title: Rb cKO 3

description: replicate 3

value: Rb1 flox/-; Amh-Cre +

tag: age


title: Control 1

description: replicate 1


title: Acute leukemia cell line NB4-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line MV4-11-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line Mono-mac-6-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line MOLT4-250ksty

description: Acute leukemia cell line


title: Control 3

description: replicate 3


title: Acute leukemia cell line OP1-250ksty

description: Acute leukemia cell line


title: Rb cKO 2

description: replicate 2


title: Acute leukemia cell line MHH-CALL-3-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line MHH-CALL-2-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line NALM-6-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line ME-1-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line KG-1-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line Kasumi-2-250ksty

description: Acute leukemia cell line


title: Rb cKO 1

description: replicate 1


title: Acute leukemia cell line Kasumi-1-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line K-562-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line HL-60-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line M-07e-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line ML-2-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line CCRF-CEM-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line Jurkat-250ksty

description: Acute leukemia cell line


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#3-50kxba

value: acute lymphoblastic leukemia


title: Acute leukemia cell line PL21-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line 697-250ksty

description: Acute leukemia cell line


title: Lymph node–negative breast cancer 1077

tag: gender

tag: tissue


title: Acute leukemia cell line AT1-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line MOLT3-250ksty

description: Acute leukemia cell line


title: A2_3


title: Acute myeloid leukemia in remission Reference-#47-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#46-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#48-250ksty

description: Acute myeloid leukemia in remission


title: Acute leukemia cell line CMK-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line BV173-250ksty

description: Acute leukemia cell line


title: Acute leukemia cell line 380-250ksty

description: Acute leukemia cell line


title: Acute myeloid leukemia in remission Reference-#44-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#45-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#43-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#40-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#41-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#37-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#38-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#35-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#31-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#36-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#34-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#42-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#25-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#26-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#28-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#49-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#30-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#23-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#29-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#20-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#21-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#22-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#19-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#53-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#27-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#24-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#32-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#16-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#18-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#14-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#52-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#9-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#17-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#15-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#12-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#6-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#7-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#5-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#4-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#62-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#1-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#50-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#13-250ksty

description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#51-250ksty

description: Acute myeloid leukemia in remission


title: Chronic myeloid leukemia CML-#23-BC-GL-250ksty

description: Chronic myeloid leukemia

source_name: Blast crisis

growth_protocol: Cryopreserved peripheral blood or bone marrow samples obtained at diagnosis, during disease progression, or after treatment. Blast crisis samples were flow sorted prior to DNA extraction.

tag: Bone marrow, flow sorted


title: Acute myeloid leukemia in remission Reference-#58-250ksty

description: Acute myeloid leukemia in remission


title: Chronic myeloid leukemia CML-#23-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#23-CP-250ksty

description: Chronic myeloid leukemia

source_name: Chronic phase

tag: Bone marrow


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description: Acute myeloid leukemia in remission


title: Acute myeloid leukemia in remission Reference-#60-250ksty

description: Acute myeloid leukemia in remission


title: Chronic myeloid leukemia CML-#21-CP2-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#22-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#21-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#20-AP-250ksty

description: Chronic myeloid leukemia

source_name: Accelerated phase


title: Chronic myeloid leukemia CML-#22-BC-GL-250ksty

description: Chronic myeloid leukemia

source_name: Germline


title: Chronic myeloid leukemia CML-#20-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#22-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#20-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#19-BC-GL-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#19-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#19-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#16-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#16-CP2-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#16-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#17-AP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#17-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#16-BC-GL-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#15-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#14-Rem-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#12-CP2-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#15-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#13-CP2-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#14-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#15-CP2-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#12-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#13-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#11-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#11-AP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#12-AP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#10-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#18-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#9-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#9-BC-GL-250ksty

description: Chronic myeloid leukemia


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description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#8-CP-250ksty

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title: Chronic myeloid leukemia CML-#7-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#6-BC-250ksty

description: Chronic myeloid leukemia


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description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#6-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#5-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#4-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#4-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#3-AP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#5-BC-GL-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#4-Rem-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#3-BC-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#5-Rem-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#2-CP-250ksty

description: Chronic myeloid leukemia


title: Chronic myeloid leukemia CML-#7-CP-250ksty

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title: Diagnostic_acute_leukemia TEL-AML1-SNP-#36-50khind


title: Diagnostic_acute_leukemia Other-SNP-#10-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#10-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#37-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#13-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#43-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#36-250ksty


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#27-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#35-250ksty


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#16-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#33-250ksty


title: Diagnostic_acute_leukemia Pseudodip-SNP-#14-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#34-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#35-50khind


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#34-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#8-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#32-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#30-250ksty


title: Diagnostic_acute_leukemia MLL-SNP-#5-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#31-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#32-50khind


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#31-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#27-250ksty


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#26-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#29-250ksty


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title: Diagnostic_acute_leukemia BCR-ABL-SNP-#26-250ksty


title: Diagnostic_acute_leukemia T-ALL-SNP-#31-50khind


title: Diagnostic_acute_leukemia T-ALL-SNP-#30-50khind


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#23-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#25-250ksty


title: Diagnostic_acute_leukemia Other-SNP-#7-250ksty


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#24-50khind


title: Diagnostic_acute_leukemia MLL-SNP-#17-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#28-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#33-50khind


title: Diagnostic_acute_leukemia T-ALL-SNP-#29-50khind


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#29-250ksty


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#23-250ksty


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title: Diagnostic_acute_leukemia Pseudodip-SNP-#12-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#30-50khind


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#25-50khind


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#24-50khind


title: Diagnostic_acute_leukemia Pseudodip-SNP-#24-50khind


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#28-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#7-250ksty


title: Diagnostic_acute_leukemia T-ALL-SNP-#27-250ksty


title: Diagnostic_acute_leukemia T-ALL-SNP-#28-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#27-250ksty


title: Diagnostic_acute_leukemia Other-SNP-#7-50khind


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title: Diagnostic_acute_leukemia Pseudodip-SNP-#23-50khind


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title: Diagnostic_acute_leukemia Hyperdip50-SNP-#19-250ksty


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title: Diagnostic_acute_leukemia BCR-ABL-SNP-#7-50khind


title: Diagnostic_acute_leukemia Pseudodip-SNP-#10-250ksty


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title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#15-250ksty


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title: Diagnostic_acute_leukemia TEL-AML1-SNP-#25-50khind


title: Diagnostic_acute_leukemia T-ALL-SNP-#25-250ksty


title: Diagnostic_acute_leukemia Pseudodip-SNP-#11-50khind


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title: Diagnostic_acute_leukemia TEL-AML1-SNP-#22-250ksty


title: Diagnostic_acute_leukemia T-ALL-SNP-#27-50khind


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#23-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#6-50khind


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title: Diagnostic_acute_leukemia Pseudodip-SNP-#9-50khind


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title: Diagnostic_acute_leukemia T-ALL-SNP-#25-50khind


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#17-250ksty


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title: Diagnostic_acute_leukemia TEL-AML1-SNP-#23-50khind


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title: Diagnostic_acute_leukemia Pseudodip-SNP-#8-50khind


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title: Diagnostic_acute_leukemia T-ALL-SNP-#24-50khind


title: Diagnostic_acute_leukemia T-ALL-SNP-#23-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#5-50khind


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#12-50khind


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title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#10-250ksty


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title: Diagnostic_acute_leukemia TEL-AML1-SNP-#19-250ksty


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title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#9-50khind


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title: Diagnostic_acute_leukemia Hyperdip50-SNP-#2-50khind


title: Diagnostic_acute_leukemia MLL-SNP-#13-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#2-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#4-50khind


title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#2-50khind


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#1-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#3-50khind


title: Diagnostic_acute_leukemia Other-SNP-#1-250ksty


title: Diagnostic_acute_leukemia BCR-ABL-SNP-#1-50khind


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#1-250ksty


title: Diagnostic_acute_leukemia T-ALL-SNP-#2-50khind


title: Diagnostic_acute_leukemia Pseudodip-SNP-#1-250ksty


title: Diagnostic_acute_leukemia T-ALL-SNP-#1-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#2-50khind


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title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#1-50khind


title: Diagnostic_acute_leukemia Other-SNP-#21-250ksty


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title: Diagnostic_acute_leukemia Hyperdip47-50-SNP-#1-250ksty


title: Diagnostic_acute_leukemia TEL-AML1-SNP-#1-50khind


title: Diagnostic_acute_leukemia Pseudodip-SNP-#1-50khind


title: Acute leukemia cell line YT-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line UOCB1-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line TOM-1-250knsp

description: Acute leukemia cell line


title: Diagnostic_acute_leukemia Hyperdip50-SNP-#1-50khind


title: Acute leukemia cell line THP-1-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line U-937-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line SKNO-1-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line SUPB-15-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line Reh-250knsp

description: Acute leukemia cell line


title: Diagnostic_acute_leukemia MLL-SNP-#12-250ksty


title: Acute leukemia cell line SD1-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line RS4_11-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line NALM-6-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line OP1-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line MV4-11-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line Mono-mac-6-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line NB4-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line MOLT4-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line NOMO-1-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line PL21-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line ML-2-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line M-07e-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line MHH-CALL-3-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line MOLT3-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line MHH-CALL-2-250knsp

description: Acute leukemia cell line


title: Acute leukemia cell line KG-1-250knsp

description: Acute leukemia cell line