title: AE202pn

description: DNA extracted from patient AE202 germline cells.

source_name: Patient AE202 germline cells obtained from bone marrow or blood at remission, adult


title: AE032pn

status: Public on Feb 07 2012

type: genomic

city: Memphis

first: Jeffery

last: Klco

state: TN

address: 262 Danny Thomas Place

department: Pathology

country: USA

institute: St Jude Children's Research Hospital

description: DNA extracted from patient AE032 germline cells.

hyb_protocol: 200-270 micrograms of amplified and biotinylated DNA were hybridized for 16-18 hr at 50C on a GeneChip Human Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.

scan_protocol: GeneChips were scanned using the AffymetrixGeneChip Scanner 3000 7G.

data_processing: CEL files and birdseed-v2.txt files (generated by Affymetrix GTYPE using the Birdseed v2 algorithm) were processed by dChip and model-based expression was performed using the PM/MM model. Normalization was performed using the reference normalization algorithm developed at St. Jude and described in Pounds et al. Bioinformatics. 2009 Feb 1;25(3):315-21 (PMID 19052058). The Sample data table contains the normalized expression values produced by that algorithm and genotyping calls.

label: biotin

molecule: genomic DNA

organism: Homo sapiens

source_name: Patient AE032 germline cells obtained from bone marrow or blood at remission, pediatric

label_protocol: 250 nanograms of genomic DNA were digested to completion with NspI or StyI, ligated to adapaters and amplified by PCR. 200-270 micrograms of pooled amplified DNA were fragmented and end-labeled with a biotinylated nucleotide according to the Genome-Wide Human SNP Nsp/Sty 6.0 User Guide 702504 Rev 3, 2008, Affymetrix).

growth_protocol: DNA was extracted from cryopreserved mononuclear cell preparations of diagnostic bone marrow or peripheral blood from AML cases with t(8;21) or inv(16).

extract_protocol: Trizol/AllPrep DNA/RNA Mini Kit (Qiagen).

treatment_protocol: None.

tag: tissue

value: bone marrow or blood

tag: cell type

value: germline cells

tag: developmental stage

value: pediatric

tag: sampling time

value: at remission

tag: patient

tag: sample type

value: control DNA


title: AE030pnt

description: DNA extracted from patient AE030 germline cells.

source_name: Patient AE030 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE034pnt

description: DNA extracted from patient AE034 germline cells.

source_name: Patient AE034 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE035pn

description: DNA extracted from patient AE035 germline cells.

source_name: Patient AE035 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE043pn

description: DNA extracted from patient AE043 germline cells.

source_name: Patient AE043 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE044pn

description: DNA extracted from patient AE044 germline cells.

source_name: Patient AE044 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE029pn

description: DNA extracted from patient AE029 germline cells.

source_name: Patient AE029 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE025pn

description: DNA extracted from patient AE025 germline cells.

source_name: Patient AE025 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE023pnt

description: DNA extracted from patient AE023 germline cells.

source_name: Patient AE023 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE017pn

description: DNA extracted from patient AE017 germline cells.

source_name: Patient AE017 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE021pnt

description: DNA extracted from patient AE021 germline cells.

source_name: Patient AE021 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE024pnt

description: DNA extracted from patient AE024 germline cells.

source_name: Patient AE024 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE006pn

description: DNA extracted from patient AE006 germline cells.

source_name: Patient AE006 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE028pnt

description: DNA extracted from patient AE028 germline cells.

source_name: Patient AE028 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE007pn

description: DNA extracted from patient AE007 germline cells.

source_name: Patient AE007 germline cells obtained from bone marrow or blood at remission, pediatric


title: AE001pn

description: DNA extracted from patient AE001 germline cells.

source_name: Patient AE001 germline cells obtained from bone marrow or blood at remission, pediatric


title: i16310

description: DNA extracted from tumor cells obtained at diagnosis.

source_name: Leukemic cells obtained from bone marrow or blood at diagnosis, inv(16), adult

value: leukemic cells

tag: disease state

value: core-binding-factor acute myeloid leukemia (CBF-AML)

value: adult

tag: chromosomal abnormality

value: at diagnosis


title: AE031pn

description: DNA extracted from patient AE031 germline cells.

source_name: Patient AE031 germline cells obtained from bone marrow or blood at remission, pediatric


title: i16307


title: i16306


title: i16301


title: i16305


title: i16303


title: i16308


title: i16297


title: i16304


title: AE008pn

description: DNA extracted from patient AE008 germline cells.

source_name: Patient AE008 germline cells obtained from bone marrow or blood at remission, pediatric


title: i16296


title: i16302


title: i16300


title: i16294


title: i16298


title: AE004pn

description: DNA extracted from patient AE004 germline cells.

source_name: Patient AE004 germline cells obtained from bone marrow or blood at remission, pediatric


title: i16291


title: i16295


title: i16288


title: i16293


title: i16299


title: i16290


title: i16287


title: i16292


title: i16286


title: i16282


title: i16284


title: i16283


title: i16285


title: i16309


title: i16289


title: i16279


title: i16273


title: i16272


title: i16269


title: i16278


title: i16275


title: i16276


title: i16280


title: i16271


title: i16274


title: i16277


title: i16266


title: i16264


title: i16281


title: i16267


title: i16268


title: i16260


title: i16263


title: i16262


title: i16270


title: i16261


title: i16252


title: i16259


title: i16255


title: i16256


title: i16257


title: i16265


title: i16250


title: i16247


title: i16258


title: i16246


title: i16240


title: i16243


title: i16245


title: i16236


title: i16241


title: i16237


title: i16242


title: i16249


title: i16253


title: i16233


title: i16251


title: i16248


title: i16228


title: i16234


title: i16235


title: i16239


title: i16227


title: i16231


title: i16232


title: i16229


title: i16238


title: i16225


title: i16219


title: i16226


title: i16217


title: i16220


title: i16218


title: i16213


title: i16215


title: i16222


title: i16209


title: i16214


title: i16221


title: i16223


title: i16211


title: i16206


title: i16212


title: i16040

source_name: Leukemic cells obtained from bone marrow or blood at diagnosis, inv(16), pediatric


title: i16210


title: i16202


title: i16203


title: i16204


title: i16038


title: i16208


title: i16205


title: i16036


title: i16037


title: i16207


title: i16039


title: i16033


title: i16035


title: i16029


title: i16031


title: i16032


title: i16030


title: i16026


title: i16025


title: i16024


title: i16034


title: i16019


title: i16022


title: i16018


title: i16028


title: i16017


title: i16011


title: i16010


title: i16020


title: i16014


title: i16012


title: i16006


title: i16008


title: i16027


title: i16013


title: i16016


title: i16005


title: i16009


title: i16003


title: i16004


title: i16015


title: i16007


title: AE305

source_name: Leukemic cells obtained from bone marrow or blood at diagnosis, t(8;21), adult


title: AE300


title: AE299


title: AE302


title: AE303


title: AE301


title: i16002


title: i16001


title: AE298


title: AE304


title: AE297


title: AE293


title: AE295


title: AE289


title: i16023


title: AE291


title: AE285


title: AE288


title: AE292


title: AE290


title: AE281


title: AE283


title: AE279


title: AE278


title: AE280


title: AE284


title: AE275


title: AE270


title: AE286


title: AE287


title: AE282


title: AE276


title: AE274


title: AE277


title: AE272


title: AE271


title: AE273


title: AE269


title: AE267


title: AE266


title: AE268


title: AE265


title: AE261


title: AE262


title: AE260


title: AE263


title: AE264


title: AE256


title: AE255


title: AE252


title: AE257


title: AE254


title: AE250


title: AE247


title: AE246


title: AE244


title: AE251


title: AE248


title: AE245


title: AE253


title: AE237


title: AE241


title: AE242


title: AE249


title: AE243


title: AE258


title: AE259


title: AE236


title: AE240


title: AE231


title: AE233


title: AE238


title: AE232


title: AE229


title: AE239


title: AE234


title: AE235


title: AE227


title: AE222


title: AE228


title: AE221


title: AE226


title: AE223


title: AE213


title: AE224


title: AE212


title: AE218


title: Human.Placenta.764

type: RNA

city: Raleigh

first: Ling

last: Guo

state: NC

address: 1060 William Moore Drive

institute: North Carolina State University

description: Sample id: 4256249087_F

hyb_protocol: Hybridization for Illumina Human6-v2 BeadArrays was performed according to manufacturer’s instructions.  Labeled cRNA was hybridized to BeadArrays at 58°C for 18 hr.  Washing, blocking, and streptavadin-Cy3 staining was performed out following manufacturer’s protocol.

scan_protocol: BeadChips were scanned on the BeadArray Reader and scanned images were analyzed using BeadStudio software.

data_processing: Transcript data was log2 transformed, and quantile normalized by using SAS 9.2 (SAS Institute, Cary, NC).

molecule: total RNA

source_name: Human placenta

label_protocol: Labeling for Illumina Human6-v2 BeadArrays was performed according to manufacturer’s instructions.  Briefly, the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems, Foster City, CA) was used for a first and second strand reverse transcription step from 500 ng of total RNA.  This was followed by an overnight in vitro transcription reaction that incorporates biotin-labeled nucleotides.  1.5 ug of biotin-labeled cRNA was mixed with an Illumina-supplied hybridization buffer containing several control oligonucleotides.

extract_protocol: Total RNA was isolated from term human placenta using the Totally RNA kit (Ambion) following the manufacturer’s instructions with slight modifications.  Briefly, homogenized tissue chilled in liquid nitrogen was lysed in 10 volumes of denaturation solution (200 mg tissue, 2 ml denaturation solution).  The lysed sample was pre-cleared of bulk genomic DNA and cellular debris by spinning at 4,000 x g for 5 minutes. The supernatant was sequentially extracted with equal volumes phenol:chloroform, and acid phenol:chloroform (pH 4.5) using phase divider gels (Sigma), then precipitated with an equal volume of 100% isopropanol.  The pellet was washed twice with 70% ethanol and resuspended in elution buffer (1 mM Tris-Cl). Total RNA was treated with Turbo DNA-free to remove traces of genomic DNA contamination (Ambion).  RNA integrity was assessed using a Bioanalyzer (Agilent Biotechnologies) and only samples with a RIN > 7 were used.

value: placenta

tag: gender

value: f

tag: classification

value: IUGR

tag: gestational age

tag: induction of labor

value: spontaneous

tag: batch

value: B


title: AE225


title: AE217


title: AE219


title: AE206


title: AE230


title: AE211


title: AE209


title: AE220


title: AE207


title: Human.Placenta.005

description: Sample id: 4256249087_D

value: PE

value: induced


title: Human.Placenta.626

description: Sample id: 4256249087_E

value: m

value: CONTROL


title: AE204

value: bone marrow or blood


title: Human.Placenta.636

description: Sample id: 4256249087_B


title: Human.Placenta.617

description: Sample id: 4256249087_A


title: Human.Placenta.625

description: Sample id: 4256249087_C


title: AE216


title: AE202


title: AE205


title: AE200


title: AE068


title: AE214


title: Human.Placenta.801

description: Sample id: 4256249072_F


title: AE201


title: Human.Placenta.039

description: Sample id: 4256249072_E


title: Human.Placenta.047

description: Sample id: 4256249072_D


title: Human.Placenta.038

description: Sample id: 4256249072_B


title: Human.Placenta.798

description: Sample id: 4256249072_C


title: Human.Placenta.045

description: Sample id: 4256249072_A


title: AE210


title: Human.Placenta.756

description: Sample id: 4256249054_F


title: AE208


title: Human.Placenta.031

description: Sample id: 4256249054_E


title: Human.Placenta.016

description: Sample id: 4256249054_C


title: Human.Placenta.751

description: Sample id: 4256249054_D


title: Human.Placenta.020

description: Sample id: 4256249054_A


title: Human.Placenta.698

description: Sample id: 4256249033_F


title: Human.Placenta.749

description: Sample id: 4256249054_B


title: AE065


title: AE060


title: Human.Placenta.767

description: Sample id: 4256249033_E


title: AE064


title: Human.Placenta.687

description: Sample id: 4256249033_C


title: AE047

source_name: Leukemic cells obtained from bone marrow or blood at diagnosis, t(8;21), pediatric

value: pediatric


title: Human.Placenta.693

description: Sample id: 4256249033_D


title: Human.Placenta.014

description: Sample id: 4256249033_B


title: AE061


title: AE203


title: Human.Placenta.674

description: Sample id: 4256249030_F


title: Human.Placenta.682

description: Sample id: 4256249033_A


title: AE058


title: AE049


title: AE051


title: Human.Placenta.678

description: Sample id: 4256249030_D


title: AE046


title: AE050


title: AE048


title: Human.Placenta.662

description: Sample id: 4256249030_E


title: AE043


title: Human.Placenta.652

description: Sample id: 4256249030_B


title: AE037


title: AE044


title: AE039


title: Human.Placenta.010

description: Sample id: 4256249030_C


title: AE042


title: Human.Placenta.659

description: Sample id: 4256249030_A


title: AE040


title: AE038


title: AE035


title: Human.Placenta.757.rep

description: Sample id: 4256249029_F


title: Human.Placenta.787

description: Sample id: 4256249029_E


title: Human.Placenta.735

description: Sample id: 4256249029_C


title: AE034


title: Human.Placenta.041

description: Sample id: 4256249029_D


title: AE066


title: AE032


title: Human.Placenta.776

description: Sample id: 4256249029_A


title: Human.Placenta.741.rep

description: Sample id: 4256249029_B


title: AE031


title: Human.Placenta.774

description: Sample id: 4256249023_D


title: Human.Placenta.775

description: Sample id: 4256249023_E


title: Human.Placenta.036

description: Sample id: 4256249023_C


title: AE030


title: Human.Placenta.763

description: Sample id: 4256249023_B


title: AE033


title: Human.Placenta.740.rep

description: Sample id: 4256249023_A


title: AE029


title: AE028


title: Human.Placenta.746

description: Sample id: 4256249022_F


title: Human.Placenta.024

description: Sample id: 4256249022_E


title: Human.Placenta.694.rep

description: Sample id: 4256249022_D


title: Human.Placenta.022

description: Sample id: 4256249023_F


title: AE026


title: AE036


title: AE025


title: Human.Placenta.744

description: Sample id: 4256249022_B


title: Human.Placenta.011

description: Sample id: 4256249022_A


title: Human.Placenta.015

description: Sample id: 4256249022_C


title: Human.Placenta.660.rep

description: Sample id: 4256249015_C


title: Human.Placenta.021

description: Sample id: 4256249015_F


title: Human.Placenta.730

description: Sample id: 4256249015_D


title: patient2-control-2

city: Newcastle

first: Simon

last: Cockell

address: Framlington Place

country: United Kingdom

institute: Newcastle University

hyb_protocol: 750ng of biotinylated cRNA was hybridised to Illumina HT-12 v4 arrays using methods adapted from the Whole-Genome Gene Expression Direct Hybridization Assay Illumina protocol by ServiceXS

scan_protocol: Samples scanned using Illumina iScan array scanner to Illumina protocols

data_processing:
Raw data is the output from Illumina Genomestudio v 2010.1
Normalized data is VST/RSN from lumi BioConductor package v2.8

source_name: non-pregnant myometrial strips

label_protocol: Illumina TotalPrep-96 RNA amplification kit was used to generate Biotin labeled cRNA according to manufacturers instructions

growth_protocol: strips were maintained  in D-val medium, 10% Fetal Calf Serum at 37oC

extract_protocol: Total RNA was extracted with Ambion RNAqueous kit according to manufacturers instructions

treatment_protocol: strips were treated for 24 hours in D-val medium, 10% Fetal Calf Serum at 37oC with either TSA, Compound 2 or vehicle (Control)

value: non-pregnant myometrial strips

tag: treatment

value: Control


title: Human.Placenta.743

description: Sample id: 4256249015_E


title: patient2-c2-2


title: patient2-tsa2

value: TSA


title: Human.Placenta.738

description: Sample id: 4256249015_B


title: AE023

value: leukemic cells

value: core-binding-factor acute myeloid leukemia (CBF-AML)


title: AE019

value: at diagnosis


title: Human.Placenta.003.rep

description: Sample id: 4256249014_F

value: placenta


title: AE024


title: Human.Placenta.766

description: Sample id: 4256249014_E


title: patient1-tsa2


title: patient1-c2-2


title: Human.Placenta.646

description: Sample id: 4256249014_D

value: f


title: AE022


title: Human.Placenta.726

description: Sample id: 4256249015_A


title: AE027


title: Human.Placenta.653

description: Sample id: 4256249014_C

value: IUGR


title: patient1-control-2


title: AE021


title: AE016


title: patient2-c2-1


title: AE017


title: AE013


title: AE012


title: plasma cells 2

city: Boston

first: Martin

last: Etzrodt

state: MA

address: 185 Cambridge Street

department: Center for Systems Biology

institute: Massachusetts General Hospital

hyb_protocol: Illumina BeadStation (Illumina)

scan_protocol: Illumina BeadStation (Illumina)

data_processing: Gene Pattern 3.3.2, Build ID 9695,  IlluminaExpressionFileCreator (background substraction: true), IlluminaNormalizer (normalization method: quantile)

organism: Mus musculus

source_name: spleen

label_protocol: Illumina BeadStation (Illumina)

growth_protocol: 6-8 wk old C57BL/6 mice, on regular chow diet.

extract_protocol: Cell were isolated by fluorescent activated cell sorting on a BD FACS Aria II directly into RLT lysis buffer and total RNA was extracted using the Qiagen RNA easy mini kit (Qiagen).

treatment_protocol: Up to 10 animals were pooled per sample. Animals were steady state or received LPS 0.4mg/kg, i.p. for 4 consecutive days.

value: spleen

value: female

tag: strain

value: plasma cells

tag: cell signature

value: LPS 0.4mg/kg, i.p.,  4 days


title: Human.Placenta.037

description: Sample id: 4256249002_B

value: PE

value: induced

value: B


title: plasma cells 4


title: Human.Placenta.734.rep

description: Sample id: 4256249002_E

value: m


title: patient2-control-1

value: non-pregnant myometrial strips


title: patient2-tsa1


title: AE010

value: bone marrow or blood

value: pediatric


title: plasma cells 1


title: patient1-c2-1


title: AE011

value: leukemic cells


title: Human.Placenta.710

description: Sample id: 4256249001_F

value: CONTROL

value: spontaneous


title: AE015

value: core-binding-factor acute myeloid leukemia (CBF-AML)

value: at diagnosis


title: Human.Placenta.032

description: Sample id: 4256249002_F

value: placenta

value: f


title: Human.Placenta.761

description: Sample id: 4256249002_C


title: AE018


title: Human.Placenta.018

description: Sample id: 4256249002_D

value: IUGR


title: AE014


title: AE009


title: plasma cells 3

value: spleen

value: female

value: plasma cells


title: Human.Placenta.034

description: Sample id: 4256249001_E

value: induced


title: patient1-tsa1

value: TSA


title: Human.Placenta.009

description: Sample id: 4256249014_A

value: m

value: PE

value: B


title: peritoneal B1a cells 4

source_name: peritoneum

value: peritoneum

value: B1a cells

value: CD19+ MHC Class II+ CD93- IgM+ CD23- CD43+ CD5+

value: steady state


title: Human.Placenta.769

description: Sample id: 4256249001_D


title: Human.Placenta.784

description: Sample id: 784b

value: CONTROL

value: spontaneous

value: A


title: patient1-control-1

value: non-pregnant myometrial strips

value: Control


title: KO_FL_rep2

city: University of NSW

first: Alister

last: Funnell

address: School of Biotechnology and Biomolecular Sciences

country: Australia

institute: University of NSW

hyb_protocol: RNA was hybridized to Affymetrix Mouse Gene 1.0 ST arrays following manufacturers instructions, by the Ramaciotti Centre for Gene Function, UNSW, Sydney, Australia

scan_protocol: Arrays were scanned following manufacturers instructions, by the Ramaciotti Centre for Gene Function, UNSW, Sydney, Australia

data_processing: Data was normalised using RMA, using the Affymetrix Power Tools (v1.8.6)

source_name: E13.5 whole fetal liver Klf1-/-

label_protocol: RNA was labeled using the Affymetrix IVT Express kit

growth_protocol: Klf1 +/- mice were housed in standard University of NSW facilities, under SPF conditions. Mice were time mated and embryos harvested at embryonic day 13.5.

extract_protocol: RNA extraction was performed using TRI-Reagent, according to manufacturer’s guidelines (Sigma-Aldrich). RNA samples were further purified using RNeasy columns (Qiagen) and by treating with DNase I (Ambion).

treatment_protocol: Fetal livers were extracted from embryos and placed in PBS with 5% FCS where they were dissociated into a single cell suspension.

value: embryonic day E13.5

value: FVB/NJ

value: whole fetal liver

tag: genotype/variation


title: Human.Placenta.779

description: Sample id: 779

tag: tissue

value: placenta

value: f


title: peritoneal B1a cells 3

value: female

tag: cell type


title: KO_FL_rep3

tag: developmental stage


title: Human.Placenta.777

description: Sample id: 777


title: Human.Placenta.757

description: Sample id: 757

value: IUGR


title: Human.Placenta.703

description: Sample id: 4256249001_C

value: B


title: peritoneal B1a cells 1

value: peritoneum


title: peritoneal B1a cells 2

value: B1a cells


title: KO_FL_rep1


title: WT_FL_rep3

source_name: E13.5 whole fetal liver wildtype

value: wildtype


title: splenic transitional type 1 B cells 2

value: spleen

value: transitional type 1 B cells

value: CD19+MHC Class II+ CD93+ IgM+ CD23- CD43-

value: LPS 0.4mg/kg, i.p.,  4 days


title: Human.Placenta.748

description: Sample id: 748

value: m

value: CONTROL

value: induced

value: A


title: Human.Placenta.017

description: Sample id: 4256249001_B

value: PE


title: Human.Placenta.758

description: Sample id: 4256249002_A

value: placenta

value: spontaneous


title: Human.Placenta.741

description: Sample id: 741

value: f


title: splenic transitional type 1 B cells 1

value: female


title: WT_FL_rep2

value: embryonic day E13.5

value: FVB/NJ

value: whole fetal liver


title: Human.Placenta.734

description: Sample id: 734

value: IUGR


title: Human.Placenta.740

description: Sample id: 740b


title: AE005

value: bone marrow or blood

value: leukemic cells

value: core-binding-factor acute myeloid leukemia (CBF-AML)

value: pediatric

tag: sampling time

value: at diagnosis


title: Human.Placenta.654.rep

description: Sample id: 4256249001_A

value: B


title: splenic marginal zone B cells 3

value: spleen

value: marginal zone B cells

value: CD19+ MHC Class II+ CD93- IgM+ CD23- CD21hi

value: LPS 0.4mg/kg, i.p.,  4 days


title: Human.Placenta.705

description: Sample id: 705

value: placenta

value: m

value: CONTROL

value: spontaneous

value: A


title: WT_FL_rep1

value: embryonic day E13.5

value: FVB/NJ

value: whole fetal liver

value: wildtype


title: Human.Placenta.660

description: Sample id: 660

value: f

value: IUGR

value: induced


title: splenic marginal zone B cells 4

value: female


title: Human.Placenta.694

description: Sample id: 694


title: splenic marginal zone B cells 2

value: spleen


title: AE004

value: bone marrow or blood

value: leukemic cells

value: core-binding-factor acute myeloid leukemia (CBF-AML)

value: pediatric

value: at diagnosis

tag: patient


title: Human.Placenta.695

description: Sample id: 695

value: placenta

value: m

value: CONTROL


title: Human.Placenta.668

description: Sample id: 668

value: spontaneous

value: A


title: Human.Placenta.657

description: Sample id: 657


title: AE006


title: splenic marginal zone B cells 1

value: marginal zone B cells

value: CD19+ MHC Class II+ CD93- IgM+ CD23- CD21hi

value: LPS 0.4mg/kg, i.p.,  4 days


title: Human.Placenta.701

description: Sample id: 701

value: f


title: WT_TER119-_rep2

data_processing: Microarray data were analyzed using Partek Genomic Suite v6.5 (Partek Inc., St Louis, MO). Microarray CEL files were imported into Partek and normalized using RMA.

source_name: E14.5 fetal liver TER119- wildtype

growth_protocol: Wildtype and Klf3 knockout mice were housed in standard University of NSW facilities, under SPF conditions

treatment_protocol: TER119- and TER119+ cells were purified from E14.5 fetal liver using Magnetic Activated Cell Sorting with Anti-TER119 MicroBeads (Miltenyi Biotech) by negative depletion (LD columns) and positive selection (MS columns) respectively as per supplier’s instructions.

value: embryonic day E14.5

value: FVB/NJ

value: fetal liver

value: wildtype


title: Human.Placenta.654

description: Sample id: 654

value: IUGR


title: WT_TER119-_rep3


title: WT_TER119-_rep4


title: AE008

value: bone marrow or blood

value: leukemic cells

value: core-binding-factor acute myeloid leukemia (CBF-AML)


title: AE007

value: pediatric

value: at diagnosis


title: Human.Placenta.013

description: Sample id: 013

value: placenta

value: m

value: PE

value: induced


title: splenic innate response activator (IRA) cells 4

value: spleen

value: female

value: innate response activator (IRA) cells

value: CD19+ MHC Class II+ CD93+ IgM+ CD23- CD43+ VLA-4hi


title: splenic innate response activator (IRA) cells 3

value: LPS 0.4mg/kg, i.p.,  4 days


title: Human.Placenta.623

description: Sample id: 623b

value: CONTROL

value: spontaneous

value: A


title: splenic innate response activator (IRA) cells 2


title: Human.Placenta.008

description: Sample id: 008

value: f

value: IUGR


title: KO_TER119-_rep4

source_name: E14.5 fetal liver TER119- Klf3 KO

value: embryonic day E14.5

value: FVB/NJ

value: fetal liver

value: Klf3 KO


title: Human.Placenta.624

description: Sample id: 624

value: placenta

value: m


title: Human.Placenta.012

description: Sample id: 012

value: PE

value: induced


title: splenic innate response activator (IRA) cells 1

value: spleen

value: female


title: SW48 E1

city: Heidelberg

first: John

last: Mariadason

state: Victoria

address: 145-163 Studley Road

department: Austin Health

institute: Ludwig Institute for Cancer Reserach

hyb_protocol: performed at the Albert Einstein College of Medicine Microarray Facility (http://www.einstein.yu.edu/dna/Affy/affy%20main.htm)

data_processing: RMA normalized using Bioconductor; cell line replicates averaged, mean of MSS and MSI cell lines calculated

label_protocol: 5 ug of total RNA labelled using the Affymetrix One Cycle IVT-biotin labelling protocol

growth_protocol: cells cultured in DMEM + 10%FBS; harvested at exponentially growing phase

extract_protocol: Qiagen RNeasy columns

treatment_protocol: untreated

tag: cell line

tag: replicate

tag: mss/msi status

value: MSI


title: Human.Placenta.006

description: Sample id: 006

tag: gender


title: AE001

value: bone marrow or blood

value: leukemic cells

tag: disease state

value: core-binding-factor acute myeloid leukemia (CBF-AML)

value: pediatric

tag: chromosomal abnormality

value: at diagnosis


title: KO_TER119-_rep2


title: WT_TER119-_rep1

value: wildtype


title: HCT116 E1

scan_protocol: performed at the Albert Einstein College of Medicine Microarray Facility (http://www.einstein.yu.edu/dna/Affy/affy%20main.htm)


title: Human.Placenta.003

description: Sample id: 003

tag: classification

value: IUGR

tag: gestational age

tag: induction of labor

value: spontaneous

value: A


title: splenic follicular B cells 2

tag: strain

value: follicular B cells

value: CD19+ MHC Class II+ CD93- IgMlow CD23+

tag: treatment

value: LPS 0.4mg/kg, i.p.,  4 days


title: CACO2 E1

value: MSS


title: HT29 E1


title: KO_TER119-_rep3

value: embryonic day E14.5

value: FVB/NJ

value: fetal liver

tag: genotype/variation

value: Klf3 KO


title: AE003

tag: tissue

value: bone marrow or blood


title: splenic follicular B cells 3

value: spleen

value: female

tag: cell type

tag: cell signature


title: splenic follicular B cells 1


title: HCC2998 E1


title: LIM2405 E2

value: MSI


title: HCC2998 E2


title: WT_TER119+_rep3

source_name: E14.5 fetal liver TER119+ wildtype

tag: developmental stage


title: RNA49_Taf15_Kontrol48.

city: aarhus

first: Yonglun

last: Luo

address: Wilhelm Meyers Allé 4

country: Denmark

institute: Aarhus University

description: total RNA sample from control for sample 5

hyb_protocol: Standard Illumina hybridization protocol

scan_protocol: Standard Illumina scanning protocol

data_processing: The data were normalised using quantile normalisation with IlluminaGUI in R

label_protocol: Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays

growth_protocol: HEK293-cells were grown in standard D-MEM containing 10% FCS.

extract_protocol: RNA was extracted with Trizol reagent. Quality control was performed with Agilent Bioanalyser.

treatment_protocol: 100000 HEK293 cells (24-well plate) were transfected with siRNA in suspension using Dharmafect 1 (Dharmacon). Total RNA was extracted 72 h post transfection.

value: control for sample 5


title: SKCO1 E1


title: RNA46_HEK293_Kontrol42-43-44

description: total RNA sample from control for samples 1-3

value: control for samples 1-3


title: HCT116 E2


title: KO_TER119-_rep1


title: LS174T E1


title: SKCO1 E2


title: RNA48_Taf15_EWS-FUSsiRNA

description: total RNA sample from TAF15siRNA, EWSsiRNA, and FUSsiRNA co-transfected cells


title: WT_TER119+_rep4

value: wildtype


title: KO_TER119+_rep2

source_name: E14.5 fetal liver TER119+ Klf3 KO


title: LIM2405 E1


title: KO_TER119+_rep1


title: WT_TER119+_rep2


title: CACO2 E2


title: LS174T E2


title: RNA44_HEK293_FUSsiRNA

description: total RNA sample from FUSsiRNA transfected cells

value: FUSsiRNA transfected cells


title: RKO E2

source_name: RKO

value: RKO


title: RKO E1


title: WT_TER119+_rep1


title: KO_TER119+_rep3


title: human urine sediment, with lesions subject 1

status: Public on Feb 06 2012

city: Lexington

first: Eric

middle: M

last: Blalock

state: KY

address: 800 Rose St.

department: Molecular and Biomedical Pharmacology

institute: University of Kentucky

hyb_protocol: Standard Affymetrix

scan_protocol: Standard Affymetrix

data_processing: Probe level data were produced by Partek GS (6.10) using the RMA output option. Probe set signal intensities < 4.2 were considered absent, and if > 10 chips rated a probe set absent, that probe set was not considered for further analysis.

source_name: human

label_protocol: RNA was stored at -80oC until all samples had been collected, then analyzed at our Microarray Core Facility using the Affymetrix GeneChip Whole Transcript (WT) Sense Target Labeling Assay protocol.

extract_protocol: Urine (40-100 ml) was immediately placed on ice, transported to the laboratory and centrifuged at -4C for 5 minutes. Pellets were washed twice with ice-cold phosphate-buffered saline, suspended in 0.8 ml TRIzol and RNA was extracted according to the manufacturer's instructions.

value: Male

tag: age

value: PBS with lesions


title: HT29 E2

tag: cell line


title: RNA43_HEK293_EWSsiRNA

description: total RNA sample from EWSsiRNA transfected cells

value: EWSsiRNA transfected cells


title: human urine sediment, without lesions subject 5

value: Female

value: PBS without lesions


title: human urine sediment, with lesions subject 2


title: U2OS+siSMRT+CDDP_2

city: La Jolla

first: Claudio

last: Scafoglio

state: CA

address: 9500 Gilman drive, CMM-W room 345, MC0648

institute: University of California san Diego

hyb_protocol: The Illumina hybridization protocol was used. Hybridization in "HYB" buffer for 18 hours at 58°C with gentle rocking followed by standard Illumina washes and streptavidin-Cy3 staining.

scan_protocol: Illumina BeadArray Reader was used. Green Channel with a PMT setting of 100%.

data_processing: Illumina BeadStudio Software produced raw data which was normalized using a modified LOESS

label_protocol: The Ambion kit "Illumina TotalPrep RNA Amplification Kit" produced amplified biotinylated cRNAs by the "Eberwine" protocol

growth_protocol: U2OS cell line in complete medium

extract_protocol: QIAquick kit as recommended by the manifacturer

treatment_protocol: 100 microM CDDP 6h


title: SW48 E2

tag: replicate


title: T84 E1

tag: mss/msi status

value: MSS


title: human urine sediment, without lesions subject 4

tag: gender


title: U2OS+siCtl+CDDP_2


title: Control group

city: Sunderland

first: Noel

middle: Mark

last: Carter

state: Tyne and Wear

address: Wharnecliffe St

department: Pharmacy, Health and Wellbeing

institute: University of Sunderland

description: Gene expression data from donor kidney after 5 hours 43 minutes ± 21 minutes post transplantation

hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using an Affymetrix genechip scanner.

data_processing: Data was processed using GCRMA from simpleaffy (BioConductor)

label: Biotin

organism: Rattus norvegicus

source_name: Kidneys from control recipient group

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

growth_protocol: Animals were housed and fed under normal conditions prior to experimental treatments

extract_protocol: Trizol extraction according to manufactureres instructions. The RNA was stored in 1X RNA sequre storage solution (Ambion). Due to a restriction in funding available the RNA from three kidneys from the control, heparin and peptide treated groups were pooled in an equimolar ratio to be used for labelling and hybridisation. Changes in gene expression are to be statistically verified by  Q-PCR performed of RNA from individual recipients.

treatment_protocol: Animals were exsanguinated under schedule 1 of the animal experimentation act 1976. The animals were left for 20 minutes to simulate the period of primary warm ischemia suffered by organs in DCD donors. The left kidney was then removed and flushed. The kidney was then stored for a period of on average 17±0.7 hours in cold University of Wisconsin (UW) organ preservation solution. After this storage period ischemia reperfusion injury was simulated by connecting the kidney to the femoral artery of a live animal under anaesthesia for a period of on average 5 hours 43 minutes ± 21 minutes. heparin was not used as an anti-coagulant to prevent interernce with data. Control animal( KID-C, n=7) were given an infusion of normal saline (1ml hr-1) and test animals (n=7 each group) were given an infusion of peptide 2 (KID-P) at a concentration of either 0.5 mg ml-1  or heparin (KID-H) infused at concentration 100 U ml-1 hr-1. After the period of reperfusion the kidneys were removed. Half of the kidney was fixed for immunohistochemical analysis and half was used to extract RNA for gene expression analysis

value: normal saline

value: Kidney

tag: Sex

tag: weight

value: Wistar


title: human urine sediment, without lesions subject 2

tag: disease state


title: RNA42_HEK293_TAF15siRNA

description: total RNA sample from TAF15siRNA transfected cells

value: TAF15siRNA transfected cells


title: human urine sediment, without lesions subject 1


title: U2OS+siNCOR+CDDP_2


title: U2OS+siCtl_no-treatment_2


title: U2OS+siSMRT_no-treatment_2


title: human urine sediment, with lesions subject 3


title: human urine sediment, control subject 5

value: normal


title: U2OS+siSMRT+CDDP


title: Peptide treated group

source_name: Kidneys from recipient group treated with Peptide

value: peptide 2


title: human urine sediment, without lesions subject 3


title: U2OS+siNCOR_no-treatment_2


title: human urine sediment, control subject 2


title: U2OS+siCtl+CDDP

data_processing: Illumina BeadStudio Software produced raw data which was normalized using a modified LOESS.

label_protocol: The Ambion kit "Illumina TotalPrep RNA Amplification Kit" produced amplified biotinylated cRNAs by the "Eberwine" protocol.


title: MDA-MB-231-pcDNA6 cell culture 2

city: Lyon

first: Julie

middle: A

last: Vendrell

state: Select a State or Province

address: 8 avenue Rockefeller

department: INSERM U1052

country: France

institute: ISPBL - Faculté de Pharmacie de Lyon

description: Gene expression data from cell population of MDA-MB-231 stably transfected with pcDNA6/V5-His plasmid, cell culture 2

hyb_protocol: Following fragmentation, 10 µg of cRNA were hybridized for 16 hr at 45C on GeneChip U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.

scan_protocol: GeneChips were scanned using the GeneChip Scanner 3000.

data_processing: The data were analyzed with Expression Console (v1.1) using Affymetrix default analysis settings and global scaling as normalization method.

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol.

growth_protocol: Cells were grown in DMEM medium supplemented with 10% fetal bovine serum and 20 µg/ml blasticidin

extract_protocol: total RNA was extracted using the RNeasy Mini Kit according to manufacturer's instructions (Qiagen).

value: cell line:MDA-MB-231

tag: transfection

value: pcDNA6/V5-His plasmid


title: MDA-MB-231-ZNF217 cell culture 2

description: Gene expression data from cell population of MDA-MB-231 stably transfected with pcDNA6/V5-His-ZNF217 plasmid, cell culture 2

value: pcDNA6/V5-His-ZNF217 plasmid


title: human urine sediment, control subject 3


title: human urine sediment, control subject 1


title: MDA-MB-231-pcDNA6 cell culture 1

description: Gene expression data from cell population of MDA-MB-231 stably transfected with pcDNA6/V5-His plasmid, cell culture 1


title: MDA-MB-231-ZNF217 cell culture 1

description: Gene expression data from cell population of MDA-MB-231 stably transfected with pcDNA6/V5-His-ZNF217 plasmid, cell culture 1


title: U2OS+siCtl_no-treatment


title: human urine sediment, control subject 4


title: U2OS+siNCOR+CDDP


title: U2OS+siNCOR_no-treatment


title: 146

status: Public on Feb 04 2012

city: Paris Cedex 05

first: Nicolas

last: Servant

address: 26 rue d'ulm

institute: Institut Curie

description: Gene expression data from Breast primary carcinoma

hyb_protocol: Illumina expression beadarray hybridization

scan_protocol: Ilumina array scanning

data_processing: Variance Stabilization Tranformation and Robust Spline Normalization as suggested in the BioConductor Lumi package. The normlized data were than corrected from the population effect as detailed in the manuscript.

source_name: Breast Cancer Carcinoma

label_protocol: Hybridization of Oligo Microarrays with ULS-CY Dye labeled amplified RNA, using the TECAN HS4800 Hybridization Station.

extract_protocol: RNA Isolation with TRIZOL® Reagent (Cell pellets(A), tissues(A) or cell culture dishes(B) (A)RNA isolation from cell pellets or tissues

treatment_protocol: Samples are individually processed (RNA isolation, followed by DNAse treatment and amplification) and equal quantities of each sample are combined to create a pool of amplified RNA.

tag: origin

value: Dutch

tag: lr

tag: pt

tag: surgicalmargin

value: marg+

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN-

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: no HT

tag: histshape

tag: histtype

value: ductal

tag: histgrade

value: EEI

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS low grade

tag: lcis

value: No LCIS

tag: lvi

value: No LVI

tag: lviquant

tag: erbyge

tag: prbyge

tag: herbyge

tag: prolifbyge

tag: subtypebyge

value: LUMA


title: 412

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

tag: histshape

value: stellate

tag: histtype

value: EEII

value: DCIS high grade


title: Heparin treated group

source_name: Kidneys from recipient group treated with heparin

tag: treatment

value: heparin

tag: tissue

value: Kidney

tag: Sex

value: Male

tag: weight

tag: strain

value: Wistar


title: 446

tag: origin

value: Dutch

tag: age

tag: lr

value: MargInv-

value: pN+

value: boost

value: ChT

value: no HT

value: multinodular

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

value: No DCIS outside

tag: dcis

value: No DCIS

tag: dcisgrade

tag: lcis

tag: lvi

tag: lviquant

value: >5 LVI

tag: erbyge

tag: prbyge

tag: herbyge

tag: prolifbyge

tag: subtypebyge

value: TNP


title: 393

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN-

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

tag: histshape

value: sharply demarcated

tag: histtype

value: other type

value: No LCIS

value: No LVI


title: 413

value: MargInv-

value: boost

value: no HT

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

value: DCIS outside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS high grade

tag: lcis

tag: lvi

tag: lviquant

tag: erbyge

tag: prbyge

tag: herbyge

value: LUMA


title: U2OS+siSMRT_no-treatment

tag: cell line


title: 391

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

tag: histshape

value: No DCIS inside

value: DCIS intermed grade

value: 2-5 LVI

tag: prolifbyge

tag: subtypebyge

value: LUMB


title: 382

value: pN+

value: no boost

value: ChT

value: stellate

tag: histtype

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: DCIS inside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

value: No LCIS

tag: lvi

value: No LVI

tag: lviquant

tag: erbyge

tag: prbyge

tag: herbyge


title: 165

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg+

tag: surgivalmargininv

value: MargInv+

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: no HT

tag: histshape

value: multinodular

value: ductal

value: DCIS

value: DCIS high grade

tag: prolifbyge


title: 116

value: marg-

value: MargInv-

value: pN+

value: ChT

tag: histtype

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: lviquant

value: 2-5 LVI

tag: erbyge

tag: subtypebyge

value: LUMA


title: 145

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: EEI

value: No DCIS inside

value: No DCIS outside

value: No DCIS

value: No LCIS

tag: prbyge

tag: herbyge


title: 444

value: French

value: MargDCIS-

value: pN-

value: no boost

value: no ChT

value: no HT

tag: histshape

tag: histtype

value: other type

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMB


title: 409

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: multinodular

value: ductal

value: EEIII

tag: erbyge

tag: subtypebyge

value: LUMA


title: 407

value: pN+

value: boost

value: ChT

value: HT

tag: histshape

value: sharply demarcated

tag: histtype

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

value: DCIS outside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS intermed grade

tag: lcis

tag: lvi

value: >5 LVI

tag: prbyge

tag: herbyge


title: 396

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN-

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

tag: ht

value: no HT

value: No DCIS outside

value: No DCIS

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMB


title: 192

value: Dutch

value: marg-

value: MargInv-

value: boost

value: no ChT

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: DCIS inside

tag: dcisoutside

tag: dcis

tag: dcisgrade

value: DCIS low grade

tag: lcis

value: No LCIS

tag: lvi

tag: erbyge

tag: subtypebyge


title: 193

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: sharply demarcated

value: EEIII

value: No DCIS inside

tag: prbyge

tag: herbyge


title: 132

value: pN+

value: no HT

tag: histshape

tag: histtype

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS high grade

tag: lcis

tag: lvi

tag: lviquant

value: >5 LVI

tag: prolifbyge

value: LUMA


title: 118

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: other type

value: No DCIS outside

value: No DCIS

value: No LVI

tag: erbyge

tag: subtypebyge

value: LUMHER


title: 236

value: pN-

tag: histshape

value: sharply demarcated

tag: histtype

value: ductal

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

value: No LCIS

tag: lvi

tag: prbyge

tag: herbyge

value: TNP


title: 166

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: no HT

tag: lviquant

value: 2-5 LVI

tag: prolifbyge

value: LUMA


title: 247

value: French

value: marg-

value: MargInv-

value: MargDCIS-

value: no boost

value: no ChT

tag: histshape

value: stellate

tag: histtype

value: lobular

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

value: LCIS present

tag: lvi

tag: erbyge

tag: subtypebyge


title: 221

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

tag: ht

value: ductal

value: EEIII

value: No DCIS inside

value: No DCIS outside

value: No DCIS

value: No LVI

tag: prbyge

tag: herbyge

value: LUMB


title: 196

value: Dutch

value: marg-

value: MargInv-

value: pN+

value: ChT

value: no HT

tag: histshape

value: sharply demarcated

tag: histtype

tag: histgrade

value: EEI

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS low grade

tag: lcis

value: No LCIS

tag: lvi

tag: lviquant

tag: prolifbyge

value: LUMA


title: 135

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: ductal

value: EEII

value: No DCIS inside

value: LCIS present

tag: erbyge

tag: subtypebyge


title: 191

value: Dutch

value: marg+

value: MargInv+

value: MargDCIS?

value: pN-

value: no ChT

value: HT

tag: histshape

tag: histtype

value: lobular

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

value: No DCIS outside

tag: dcis

value: No DCIS

tag: dcisgrade

tag: lcis

tag: lvi

value: No LVI

tag: prbyge

tag: herbyge


title: 274

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN+

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: stellate

value: DCIS inside

value: DCIS outside

value: DCIS

value: DCIS high grade

value: No LCIS

tag: lviquant

tag: prolifbyge

value: LUMB


title: 257

value: pN-

value: no ChT

value: no HT

tag: histshape

tag: histtype

value: lobular

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

value: No DCIS outside

tag: dcis

tag: dcisgrade

tag: lcis

value: LCIS present

tag: lvi

tag: erbyge

tag: subtypebyge

value: LUMA


title: 289

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

tag: ht

value: ductal

value: EEI

value: No LVI

tag: prbyge

tag: herbyge

value: LUMHER


title: 246

value: pN-

value: no ChT

tag: histshape

value: stellate

tag: histtype

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: DCIS inside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS high grade

tag: lcis

value: No LCIS

tag: lvi

tag: lviquant

tag: prolifbyge


title: 182

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: no HT

value: EEII

value: No DCIS inside

value: No DCIS outside

value: No DCIS

tag: erbyge

tag: subtypebyge

value: LUMA


title: 266

value: French

value: marg-

value: MargInv-

value: MargDCIS-

value: pN+

value: no boost

value: ChT

tag: histshape

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge


title: 283

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: DCIS inside

value: DCIS outside

value: DCIS

value: DCIS high grade

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMHER


title: 173

value: Dutch

value: boost

value: no HT

tag: histshape

tag: histtype

tag: histgrade

value: EEI

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

value: No DCIS outside

tag: dcis

tag: dcisgrade

tag: lcis

value: No LCIS

tag: lvi

tag: erbyge

tag: subtypebyge

value: LUMA


title: 272

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: sharply demarcated

value: EEIII

value: No DCIS inside

value: No DCIS

tag: prbyge

tag: herbyge

value: TNP


title: 253

value: pN-

value: no ChT

tag: histshape

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

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tag: dcisoutside

value: DCIS outside

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value: DCIS

tag: dcisgrade

value: DCIS high grade

tag: lcis

tag: lvi

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMB


title: 375

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

tag: ht

value: HT

value: DCIS inside

value: No LCIS

tag: erbyge

tag: subtypebyge


title: 187

value: Dutch

value: no HT

tag: histshape

value: stellate

tag: histtype

tag: histgrade

value: EEI

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

value: DCIS low grade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge

value: LUMA


title: 125

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: ductal

value: EEII

value: No DCIS inside

value: No DCIS outside

value: No DCIS

tag: lviquant

tag: prolifbyge


title: 148

value: marg-

value: MargInv-

value: boost

tag: histshape

value: sharply demarcated

tag: histtype

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

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tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

value: >5 LVI

tag: erbyge

tag: subtypebyge

value: LUMB


title: 258

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: no HT

value: multinodular

value: No LCIS

value: No LVI

tag: prbyge

tag: herbyge

value: TNP


title: 107

value: Dutch

value: pN-

value: no ChT

tag: histshape

tag: histtype

value: lobular

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

value: LCIS present

tag: lvi

tag: lviquant

tag: prolifbyge

value: LUMA


title: 147

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

value: pN+

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: stellate

value: ductal

value: No DCIS outside

value: No DCIS

value: >5 LVI

tag: erbyge

tag: subtypebyge

value: LUMHER


title: 158

value: Dutch

value: pN-

value: no ChT

value: no HT

tag: histshape

tag: histtype

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

value: No LCIS

tag: lvi

value: 2-5 LVI

tag: prbyge

tag: herbyge


title: 225

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: EEI

value: No DCIS inside

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMA


title: 248

value: French

value: MargDCIS-

value: no boost

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

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value: DCIS inside

tag: dcisoutside

value: DCIS outside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS high grade

tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge


title: 342

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: no HT

value: multinodular

value: other type

value: No LCIS

tag: prbyge

tag: herbyge


title: 137

value: Dutch

tag: histshape

tag: histtype

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: lviquant

tag: prolifbyge

value: TNP


title: 128

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: EEI

value: DCIS intermed grade

value: No LVI

tag: erbyge

tag: subtypebyge

value: LUMB


title: 390

value: French

value: marg-

value: MargInv-

value: MargDCIS-

value: pN+

value: ChT

value: HT

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge

value: LUMHER


title: 353

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: no HT

value: DCIS

value: DCIS high grade

value: No LCIS

tag: lviquant

tag: prolifbyge


title: 357

value: French

value: marg-

tag: histshape

tag: histtype

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

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value: DCIS inside

tag: dcisoutside

value: DCIS outside

tag: dcis

tag: dcisgrade

value: DCIS intermed grade

tag: lcis

tag: lvi

value: No LVI

tag: erbyge

tag: subtypebyge

value: LUMA


title: 343

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: ductal

value: EEII

value: No DCIS inside

value: No DCIS outside

value: No DCIS

tag: prbyge

tag: herbyge


title: 175

value: Dutch

value: marg+

value: MargInv+

value: pN+

value: boost

value: ChT

value: no HT

tag: histshape

tag: histtype

tag: histgrade

tag: tubuleformation

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tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

value: No LCIS

tag: lvi

tag: lviquant

value: >5 LVI

tag: prolifbyge

value: LUMB


title: 351

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

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tag: pn

value: pN-

tag: rtboost

tag: rttotaldose

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tag: ht

value: sharply demarcated

value: EEIII

value: No LVI

tag: erbyge

tag: subtypebyge

value: TNP


title: 352

value: marg-

value: MargInv-

value: no ChT

tag: histshape

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge


title: 260

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

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tag: rtboost

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tag: rttotaldose

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value: HT

value: stellate

value: DCIS inside

value: No DCIS outside

value: DCIS

value: DCIS high grade

tag: lviquant

tag: prolifbyge


title: 226

value: Dutch

value: pN-

value: boost

value: no HT

tag: histshape

tag: histtype

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value: EEII

tag: tubuleformation

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tag: dcisoutside

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value: No DCIS

tag: dcisgrade

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tag: lvi

tag: erbyge

tag: subtypebyge


title: 195

tag: origin

tag: age

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tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

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tag: surgicalmargindcis

tag: pn

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tag: rttotaldose

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value: no ChT

tag: ht

value: ductal

value: No LVI

tag: prbyge

tag: herbyge

value: LUMB


title: 237

value: no boost

tag: histshape

value: stellate

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value: EEI

tag: tubuleformation

tag: polymorphism

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tag: dcisoutside

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tag: dcisgrade

value: DCIS low grade

tag: lcis

tag: lvi

tag: lviquant

value: >5 LVI

tag: prolifbyge

value: LUMA


title: 362

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgicalmargindcis

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tag: pn

value: pN-

tag: rtboost

tag: rttotaldose

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tag: ht

value: no HT

value: sharply demarcated

value: other type

value: EEIII

value: No DCIS outside

value: LCIS present

tag: erbyge

tag: subtypebyge

value: TNP


title: 378

value: marg-

value: MargInv-

value: pN+

value: ChT

tag: histshape

tag: histtype

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

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tag: dcisoutside

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value: DCIS

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tag: lvi

value: No LVI

tag: prbyge

tag: herbyge


title: 346

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value: French

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tag: lr

tag: pt

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tag: pn

value: pN-

tag: rtboost

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tag: rttotaldose

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value: no ChT

tag: ht

value: no HT

value: stellate

value: DCIS inside

value: DCIS outside

tag: lviquant

tag: prolifbyge

value: LUMA


title: 367

value: marg-

value: MargInv-

tag: histshape

tag: histtype

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tag: tubuleformation

tag: polymorphism

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tag: dcisoutside

tag: dcis

tag: dcisgrade

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tag: lvi

tag: erbyge

tag: subtypebyge


title: 366

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

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tag: rtboost

tag: rttotaldose

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tag: ht

value: multinodular

value: ductal

value: EEIII

value: No DCIS outside

value: DCIS

value: DCIS high grade

tag: prbyge

tag: herbyge

value: LUMB


title: 227

value: Dutch

value: marg+

value: MargInv+

value: pN-

value: boost

value: no ChT

value: no HT

tag: histshape

tag: histtype

tag: histgrade

tag: tubuleformation

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tag: dcisoutside

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value: No DCIS

tag: dcisgrade

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tag: lviquant

value: >5 LVI

tag: prolifbyge


title: 376

tag: origin

value: French

tag: age

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tag: surgivalmargininv

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tag: surgicalmargindcis

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tag: rtboost

tag: rttotaldose

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tag: ht

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value: ductal

value: EEI

value: DCIS inside

value: DCIS outside

value: DCIS intermed grade

tag: erbyge

tag: subtypebyge

value: LUMA


title: 374

value: pN+

value: boost

value: ChT

tag: histshape

tag: histtype

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value: EEII

tag: tubuleformation

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tag: dcisoutside

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value: DCIS

tag: dcisgrade

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tag: prbyge

tag: herbyge

value: LUMB


title: 380

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

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tag: surgicalmargindcis

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tag: rtboost

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tag: rttotaldose

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value: No DCIS inside

value: No DCIS outside

value: No DCIS

value: No LCIS

value: No LVI

tag: lviquant

tag: prolifbyge


title: 265

value: MargDCIS-

value: pN-

value: boost

value: no ChT

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

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tag: mitoticindex

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tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge


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tag: origin

tag: age

tag: lr

tag: pt

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tag: surgivalmargininv

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tag: rtboost

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tag: ht

value: sharply demarcated

value: EEIII

value: DCIS

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value: LVI present

value: 1 LVI

tag: prbyge

tag: herbyge

value: LUMB


title: 340

value: French

value: marg-

value: MargInv-

value: no boost

value: no HT

tag: histshape

tag: histtype

tag: histgrade

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tag: tubuleformation

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tag: dcisgrade

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tag: lvi

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMA


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tag: origin

value: Dutch

tag: age

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tag: surgivalmargininv

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tag: rttotaldose

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value: ChT

tag: ht

value: HT

value: stellate

value: ductal

value: DCIS intermed grade

value: >5 LVI

tag: erbyge

tag: subtypebyge


title: 169

value: no HT

tag: histshape

value: sharply demarcated

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value: EEIII

tag: tubuleformation

tag: polymorphism

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tag: dcisoutside

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value: No DCIS

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge


title: 251

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

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tag: surgicalmargindcis

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value: pN-

tag: rtboost

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tag: rttotaldose

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value: no ChT

tag: ht

value: EEII

value: No DCIS outside

value: No LCIS

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tag: lviquant

tag: prolifbyge

value: LUMA


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value: pN+

value: boost

value: ChT

value: HT

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

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tag: dcisoutside

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tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge


title: 180

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

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tag: surgicalmargindcis

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value: No DCIS inside

value: No DCIS

tag: prbyge

tag: herbyge


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value: French

value: MargDCIS-

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value: no ChT

tag: histshape

tag: histtype

tag: histgrade

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tag: lvi

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMA


title: 371

tag: origin

tag: age

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tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

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tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: stellate

value: ductal

value: EEII

value: DCIS

value: DCIS high grade

tag: erbyge

tag: subtypebyge

value: LUMB


title: 370

value: French

value: MargDCIS-

value: pN-

value: no boost

value: no HT

tag: histshape

tag: histtype

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

tag: dcis

value: No DCIS

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge


title: 384

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: No DCIS outside

value: No LCIS

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMA


title: 383

value: MargInv-

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge


title: 363

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN-

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: multinodular

value: EEI

tag: prbyge

tag: herbyge


title: 365

value: marg-

value: no HT

tag: histshape

tag: histtype

value: lobular

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

value: LCIS present

tag: lvi

tag: lviquant

tag: prolifbyge


title: 354

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN+

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: DCIS high grade

value: No LCIS

value: No LVI

tag: erbyge

tag: subtypebyge

value: LUMHER


title: 87

value: Dutch

value: marg+

value: MargInv+

tag: histshape

value: stellate

tag: histtype

value: other type

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS low grade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge

value: LUMA


title: 60

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: no HT

value: ductal

value: EEIII

tag: lviquant

tag: prolifbyge


title: 389

value: French

value: marg-

value: MargInv-

value: MargDCIS-

value: pN-

value: boost

value: no ChT

tag: histshape

tag: histtype

value: lobular

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

value: No DCIS outside

tag: dcis

value: No DCIS

tag: dcisgrade

tag: lcis

value: LCIS present

tag: lvi

tag: erbyge

tag: subtypebyge


title: 68

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN+

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: HT

value: stellate

value: DCIS

value: DCIS high grade

value: No LCIS

value: >5 LVI

tag: prbyge

tag: herbyge

value: LUMB


title: 350

value: French

value: marg-

value: MargInv-

value: MargDCIS-

value: pN-

value: no ChT

value: no HT

tag: histshape

value: sharply demarcated

tag: histtype

value: other type

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

value: No LVI

tag: lviquant

tag: prolifbyge


title: 359

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN+

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: stellate

value: ductal

tag: erbyge

tag: subtypebyge


title: 386

tag: histshape

tag: histtype

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS high grade

tag: lcis

value: No LCIS

tag: lvi

tag: prbyge

tag: herbyge

value: LUMA


title: 347

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: DCIS inside

value: DCIS outside

tag: lviquant

tag: prolifbyge

value: TNP


title: 254

value: pN-

value: no ChT

value: no HT

tag: histshape

value: sharply demarcated

tag: histtype

value: other type

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

value: DCIS intermed grade

tag: lcis

value: LCIS present

tag: lvi

value: No LVI

tag: erbyge

tag: subtypebyge

value: LUMB


title: 164

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN+

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: stellate

value: ductal

value: EEI

value: No DCIS inside

value: No DCIS outside

value: No DCIS

value: No LCIS

tag: prbyge

tag: herbyge

value: LUMA


title: 261

value: French

value: marg-

value: MargInv-

value: MargDCIS-

value: pN-

value: no ChT

value: no HT

tag: histshape

tag: histtype

value: lobular

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: lviquant

tag: prolifbyge


title: 245

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: LCIS present

value: No LVI

tag: erbyge

tag: subtypebyge


title: 188

value: Dutch

value: boost

tag: histshape

tag: histtype

value: ductal

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS intermed grade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge

value: LUMB


title: 144

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

value: pN+

tag: rtboost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: DCIS inside

value: DCIS outside

value: DCIS high grade

value: No LCIS

tag: lviquant

value: 2-5 LVI

tag: prolifbyge

value: LUMA


title: 410

value: French

value: MargDCIS-

value: pN-

value: no boost

value: no ChT

value: no HT

tag: histshape

value: multinodular

tag: histtype

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

value: No DCIS outside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge


title: 411

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: ductal

value: EEI

value: DCIS

value: DCIS intermed grade

value: No LVI

tag: prbyge

tag: herbyge


title: 381

value: French

value: boost

tag: histshape

tag: histtype

value: lobular

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

tag: dcis

value: No DCIS

tag: dcisgrade

tag: lcis

value: LCIS present

tag: lvi

tag: lviquant

tag: prolifbyge

value: LUMA


title: 403

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN+

tag: rtboost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: no HT

value: other type

value: EEIII

value: No LCIS

value: >5 LVI

tag: erbyge

tag: subtypebyge

value: LUMB


title: 402

value: marg-

value: MargInv-

value: pN-

value: no ChT

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge


title: 405

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

tag: ht

value: EEII

value: DCIS outside

value: DCIS

value: DCIS intermed grade

value: No LVI

tag: lviquant

tag: prolifbyge


title: 392

value: MargDCIS-

value: no HT

tag: histshape

tag: histtype

tag: histgrade

value: EEI

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge

value: LUMHER


title: 408

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg+

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS+

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: HT

value: sharply demarcated

value: No DCIS inside

value: DCIS high grade

value: No LCIS

tag: prbyge

tag: herbyge


title: 423

value: French

value: marg-

value: MargInv-

value: pN-

value: boost

value: no ChT

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: DCIS inside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: lviquant

tag: prolifbyge

value: LUMA


title: 394

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN+

tag: rtboost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: lobular

value: EEI

value: No DCIS outside

value: No DCIS

value: No LVI

tag: erbyge

tag: subtypebyge


title: 385

value: French

value: marg-

value: no boost

value: HT

tag: histshape

value: multinodular

tag: histtype

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS high grade

tag: lcis

value: No LCIS

tag: lvi

tag: prbyge

tag: herbyge

value: TNP


title: 401

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN-

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: no HT

value: stellate

value: ductal

value: EEII

value: DCIS inside

value: DCIS intermed grade

value: LCIS present

tag: lviquant

value: 2-5 LVI

tag: prolifbyge

value: LUMA


title: 369

value: French

value: marg-

tag: histshape

value: sharply demarcated

tag: histtype

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: No DCIS inside

tag: dcisoutside

value: No DCIS outside

tag: dcis

value: No DCIS

tag: dcisgrade

tag: lcis

tag: lvi

value: No LVI

tag: erbyge

tag: subtypebyge


title: 421

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN-

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: lobular

tag: prbyge

tag: herbyge


title: 436

value: boost

value: no HT

tag: histshape

tag: histtype

value: other type

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS intermed grade

tag: lcis

value: No LCIS

tag: lvi

tag: lviquant

tag: prolifbyge

value: LUMB


title: 404

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN+

tag: rtboost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: HT

value: sharply demarcated

value: ductal

value: EEIII

value: No DCIS inside

value: DCIS outside

value: DCIS high grade

value: 2-5 LVI

tag: erbyge

tag: subtypebyge


title: 441

value: MargInv-

value: MargDCIS-

value: boost

value: no HT

tag: histshape

value: stellate

tag: histtype

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

value: >5 LVI

tag: prbyge

tag: herbyge


title: 424

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: EEII

value: No DCIS outside

value: No DCIS

value: No LCIS

value: No LVI

tag: lviquant

tag: prolifbyge

value: LUMB


title: 442

value: Dutch

value: marg+

value: MargInv+

value: pN+

value: ChT

value: HT

tag: histshape

tag: histtype

value: other type

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: DCIS inside

tag: dcisoutside

value: DCIS outside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS low grade

tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge


title: 414

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: ductal

value: EEII

value: No DCIS inside

tag: prbyge

tag: herbyge

value: LUMHER


title: 364

value: pN+

value: boost

value: ChT

value: no HT

tag: histshape

tag: histtype

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

value: DCIS high grade

tag: lcis

value: No LCIS

tag: lvi

value: No LVI

tag: lviquant

tag: prolifbyge

value: TNP


title: 426

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: sharply demarcated

value: No DCIS outside

value: No DCIS

tag: erbyge

tag: subtypebyge

value: LUMB


title: 372

value: MargDCIS-

value: boost

tag: histshape

tag: histtype

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

value: DCIS outside

tag: dcis

value: DCIS

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge


title: 379

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: no HT

value: stellate

value: DCIS high grade

value: No LCIS

value: No LVI

tag: lviquant

tag: prolifbyge


title: 417

value: French

value: marg-

value: MargDCIS?

value: pN-

value: no boost

tag: histshape

tag: histtype

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

value: DCIS inside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge


title: 440

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

value: pN+

tag: rtboost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: DCIS intermed grade

value: LVI present

value: 1 LVI

tag: prbyge

tag: herbyge

value: LUMB


title: 387

value: MargDCIS-

value: no ChT

value: no HT

tag: histshape

value: stellate

tag: histtype

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

value: DCIS outside

tag: dcis

value: DCIS

tag: dcisgrade

tag: lcis

tag: lvi

tag: lviquant

tag: prolifbyge

value: LUMA


title: 427

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

tag: ht

value: DCIS inside

value: No DCIS outside

value: DCIS high grade

value: No LCIS

value: No LVI

tag: erbyge

tag: subtypebyge


title: 425

value: MargInv-

value: MargDCIS-

value: boost

value: no ChT

tag: histshape

tag: histtype

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge

value: LUMHER


title: 356

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: no HT

value: sharply demarcated

value: ductal

value: EEIII

tag: lviquant

tag: prolifbyge

value: TNP


title: 286

value: French

value: marg+

value: MargInv+

value: pN-

tag: histshape

value: stellate

tag: histtype

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

value: DCIS

tag: dcisgrade

value: DCIS intermed grade

tag: lcis

value: LCIS present

tag: lvi

tag: erbyge

tag: subtypebyge

value: LUMA


title: 262

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

tag: rtboost

value: no boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: lobular

value: EEI

value: No DCIS inside

value: No DCIS outside

value: No DCIS

value: No LVI

tag: prbyge

tag: herbyge


title: 231

value: Dutch

value: pN-

value: boost

value: no HT

tag: histshape

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

value: DCIS low grade

tag: lcis

value: No LCIS

tag: lvi

tag: lviquant

tag: prolifbyge


title: 219

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: EEII

value: DCIS inside

value: DCIS outside

value: DCIS

value: DCIS high grade

tag: erbyge

tag: subtypebyge

value: TNP


title: 278

value: French

value: MargDCIS-

value: pN+

value: ChT

tag: histshape

tag: histtype

tag: histgrade

value: EEIII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

value: No LVI

tag: prbyge

tag: herbyge

value: LUMA


title: 229

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

value: boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: no HT

value: lobular

value: No DCIS inside

value: DCIS intermed grade

tag: lviquant

value: 2-5 LVI

tag: prolifbyge


title: 131

value: marg-

value: MargInv-

tag: histshape

value: sharply demarcated

tag: histtype

value: ductal

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

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tag: dcis

value: No DCIS

tag: dcisgrade

tag: lcis

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tag: lvi

tag: erbyge

tag: subtypebyge

value: LUMB


title: 264

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

value: MargDCIS-

tag: pn

value: pN-

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tag: rttotaldose

tag: ct

tag: ht

value: stellate

value: EEI

value: DCIS inside

value: DCIS

value: No LVI

tag: prbyge

tag: herbyge

value: LUMA


title: 143

value: Dutch

value: marg+

value: MargInv+

value: pN+

value: boost

value: ChT

value: no HT

tag: histshape

value: multinodular

tag: histtype

tag: histgrade

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value: No DCIS inside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: lviquant

tag: prolifbyge


title: 119

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

value: MargInv-

tag: surgicalmargindcis

tag: pn

value: pN-

tag: rtboost

tag: rttotaldose

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value: no ChT

tag: ht

value: ductal

value: No DCIS outside

value: No DCIS

value: No LCIS

value: 2-5 LVI

tag: erbyge

tag: subtypebyge

value: LUMB


title: 228

value: Dutch

value: no boost

tag: histshape

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tag: histtype

value: lobular

tag: histgrade

value: EEII

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

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tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

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tag: prbyge

tag: herbyge

value: LUMA


title: 235

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

tag: surgicalmargindcis

tag: pn

value: pN+

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value: boost

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tag: ct

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tag: ht

value: no HT

value: EEIII

value: No DCIS inside

tag: lviquant

tag: prolifbyge

value: TNP


title: 234

value: MargInv-

value: pN-

value: no ChT

tag: histshape

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value: ductal

tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

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value: No DCIS outside

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value: No DCIS

tag: dcisgrade

tag: lcis

value: No LCIS

tag: lvi

tag: erbyge

tag: subtypebyge


title: 183

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

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tag: surgivalmargininv

tag: surgicalmargindcis

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value: EEII

value: No LVI

tag: prbyge

tag: herbyge

value: LUMB


title: 186

value: marg-

value: pN+

value: boost

value: ChT

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value: sharply demarcated

tag: histtype

tag: histgrade

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tag: dcisoutside

tag: dcis

tag: dcisgrade

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tag: lvi

tag: lviquant

tag: prolifbyge


title: 224

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

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tag: rtboost

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value: No DCIS inside

value: >5 LVI

tag: erbyge

tag: subtypebyge


title: 232

tag: histshape

tag: histtype

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tag: dcisgrade

tag: lcis

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tag: lvi

tag: prbyge

tag: herbyge


title: 184

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

tag: surgicalmargindcis

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tag: prolifbyge

value: TNP


title: 250

value: French

value: marg-

value: boost

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value: other type

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tag: dcisinside

tag: dcisoutside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: erbyge

tag: subtypebyge

value: LUMHER


title: 168

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

tag: surgivalmargininv

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tag: surgicalmargindcis

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value: pN+

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tag: prbyge

tag: herbyge

value: LUMB


title: 230

value: Dutch

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tag: histtype

tag: histgrade

tag: tubuleformation

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tag: mitoticindex

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tag: dcisoutside

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tag: dcis

value: No DCIS

tag: dcisgrade

tag: lcis

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tag: lvi

tag: lviquant

value: >5 LVI

tag: prolifbyge


title: 163

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

tag: surgicalmargindcis

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value: pN-

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value: boost

tag: rttotaldose

tag: ct

value: no ChT

tag: ht

value: stellate

value: EEIII

tag: erbyge

tag: subtypebyge

value: TNP


title: 161

value: no HT

tag: histshape

tag: histtype

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tag: histgrade

tag: tubuleformation

tag: polymorphism

tag: mitoticindex

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value: DCIS inside

tag: dcisoutside

value: DCIS outside

tag: dcis

tag: dcisgrade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge


title: 220

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgicalmargindcis

tag: pn

tag: rtboost

tag: rttotaldose

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tag: ht

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value: No DCIS inside

value: No LVI

tag: lviquant

tag: prolifbyge


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value: MargDCIS-

tag: histshape

tag: histtype

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tag: tubuleformation

tag: polymorphism

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value: DCIS

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value: DCIS high grade

tag: lcis

value: No LCIS

tag: lvi

tag: erbyge

tag: subtypebyge

value: LUMA


title: 243

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

value: marg-

tag: surgivalmargininv

tag: surgicalmargindcis

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tag: rttotaldose

tag: ct

value: ChT

tag: ht

value: no HT

value: stellate

value: EEIII

value: No DCIS

tag: prbyge

tag: herbyge

value: LUMHER


title: 114

value: Dutch

value: MargInv-

value: pN-

value: boost

value: no ChT

tag: histshape

value: sharply demarcated

tag: histtype

value: ductal

tag: histgrade

tag: tubuleformation

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tag: dcisoutside

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tag: dcisgrade

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tag: lviquant

tag: prolifbyge

value: LUMB


title: 129

tag: origin

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

tag: surgicalmargindcis

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tag: ct

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value: DCIS

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tag: erbyge

tag: subtypebyge

value: LUMA


title: 222

value: ChT

value: no HT

tag: histshape

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tag: histgrade

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tag: dcis

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value: DCIS high grade

tag: lcis

tag: lvi

tag: prbyge

tag: herbyge


title: 223

tag: origin

value: Dutch

tag: age

tag: lr

tag: pt

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tag: surgivalmargininv

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value: no ChT

tag: ht

value: No DCIS outside

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tag: lviquant

value: >5 LVI

tag: prolifbyge

value: TNP


title: 259

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value: marg-

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value: no boost

tag: histshape

value: sharply demarcated

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tag: erbyge

tag: subtypebyge


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tag: origin

tag: age

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value: EEI

value: DCIS inside

value: DCIS outside

value: DCIS

value: DCIS intermed grade

tag: prbyge

tag: herbyge

value: LUMA


title: 130

value: Dutch

value: boost

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tag: histtype

value: lobular

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value: No DCIS outside

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value: No DCIS

tag: dcisgrade

tag: lcis

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tag: lviquant

tag: prolifbyge

value: LUMB


title: 244

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tag: lr

tag: pt

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tag: surgivalmargininv

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tag: surgicalmargindcis

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tag: ct

value: ChT

tag: ht

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value: ductal

value: No LCIS

value: No LVI

tag: erbyge

tag: subtypebyge


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value: boost

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tag: histshape

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tag: lvi

tag: prbyge

tag: herbyge

value: LUMA


title: 443

tag: origin

value: French

tag: age

tag: lr

tag: pt

tag: surgicalmargin

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tag: surgivalmargininv

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tag: surgicalmargindcis

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value: DCIS inside

value: No DCIS outside

tag: lviquant

tag: prolifbyge


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value: no HT

tag: histshape

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tag: histtype

tag: histgrade

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tag: dcisoutside

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