title: Blood - Low post-mortem interval - SM-2XV5I

value: 30-39 years

value: Blood

value: Whole Blood


title: Skin - Low post-mortem interval - SM-2QU57

status: Public on Apr 09 2013

type: RNA

city: Cambridge

first: Kristin

last: Ardlie

state: MA

address: 7 Cambridge Center

country: USA

institute: The Broad Institute of MIT and Harvard

hyb_protocol: Affymetrix protocol

scan_protocol: Affymetrix protocol

data_processing:
Probe level data were summarized using custom probeset definitions provided by the BrainArrray resource (http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/genomic_curated_CDF.asp). RMA normalization was using Ensembl gene definitions.
probe group file: HuGene11stv1_Hs_ENSG.cdf

label: biotin

molecule: total RNA

organism: Homo sapiens

source_name: Skin - Sun Exposed (Lower leg) - Low post-mortem interval

label_protocol: Affymetrix protocol

extract_protocol: Affymetrix protocol

tag: gender

value: Female

tag: age

value: 50-59 years

tag: rin

tag: tissue

value: Skin

value: Skin - Sun Exposed (Lower leg)

value: 4-7 hours


title: Blood Vessel - Low post-mortem interval - SM-2QU4H

source_name: Artery - Tibial - Low post-mortem interval

value: 40-49 years

value: Blood Vessel

value: Artery - Tibial

value: 0-3 hours


title: Adipose Tissue - Low post-mortem interval - SM-2QU2R

source_name: Adipose - Subcutaneous - Low post-mortem interval

value: Adipose Tissue

value: Adipose - Subcutaneous


title: Adipose Tissue - Low post-mortem interval - SM-2IZIA


title: Skin - Low post-mortem interval - SM-2IZIV


title: Muscle - Low post-mortem interval - SM-2QU4S

source_name: Muscle - Skeletal - Low post-mortem interval

value: Muscle

value: Muscle - Skeletal


title: Control BY 004

type: genomic

city: shenyang

first: lu

last: yongping

address: huanggu strict puhe street

country: China

institute: key lab of liaoning province family planning research institution

description:
Control BY_004
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

hyb_protocol: To prepare Cy3 labeled single strand products, 10μL allele-specific extension products were added 10μL mix containing 1.33×SSC, 0.067% SSC, 0.033mg/ml salmon sperm DNA, and 50nM Cy3-labeled com-tag. The mix was denatured at 94°C for 10 min and cooled 5 min on ice. Hybridization was then performed using this hybridization solution in a hybridization chamber at 60°C for 2 hours. Hybridization was followed by two washes in 2×SSC/0.1%SDS (preheated to 50°C) for 5min, proceeded by washing in 0.2×SSC/0.1%SDS for 1 min, then rinsed in dH2O and dried by centrifugation 3 min at 500 r.p.m.

scan_protocol: Microarrays were scanned at 100-μm resolution, using GenePix 4000B scanner (Axon instruments, USA), the TIFF images were imported into GenePix 6.0 software (Axon Instruments, USA).

data_processing:
The sample data table contains the mean single value of the spot subtracted the mean single of background as the spot's single (F532 Mean - B532), used for AF (allele B/allele A + allele B) calculation.
For example, for mother kq_001,  The single of allele T= (27709+27469)/2=27589, The single of allele C= (22835+32770)/2=27802.5, thus, the AF of rs3771494=27589/27859+27802.5=0.498, which is between 0.4 and 0.6, so the genotype was heterozygote.For mother kq_002, the single of allele T=(27709+32380)/2=30044.5, the single of allele C=(305+545)/2=425. The AF of rs3771494=30044.5/30044.5+425=0.985, which was >0.6, so the genotype was T homozygote.

molecule: genomic DNA

label_protocol: Multiplex PCR was amplified with the Multiplex PCR Assay Kit (Takara) in 20μL [Multiplex PCR mix2 10μL, Multiplex PCR mix1 0.2μL, 0.2μM primers, 50ng DNA]. Thermocycling was performed with an initial 60 second denaturation at 94°C followed by 35 cycles of: 30 seconds at 94°C, 90 seconds at 57°C and 90 seconds at 72°C, and final extension at 72°C for 10 minutes. The PCR product was used as a template for Multiplex allele-specific primer extension. In order to remove excess dNTPs and primers, a mix was added into 10μL PCR product, containing 2 units of shrimp alkaline phosphatase (Takara) and 4 units EXO I(Takara) with incubation at 37°C for 30 min followed by 96°C for 10 min. 10μL of treated PCR products was added to 5μL ASPE mix containing 1×Thermopol reaction buffer, 80μM of each dATP, dGTP, dTTP (Takara), 40μM Cy3-dCTP (GE), 0.2 unit of a vent exo- DNA polymerase(New England Biolabs), 25nM allele-specific primers. The extension conditions were as follows: an initial 3min at 94°C, 35 cycles of 94°C for 30 second, 60°C for 30 second 72°C for 1 min, and final extension at 72°C for 5minutes.

extract_protocol: DNA was obtained from the blood samples using TIANamp Blood DNA kit (TianGen).

tag: sample group

value: control individuals

tag: clinical type

value: non cleft

value: blood


title: Blood - Pre-mortem blood draw - SM-2IZIL

source_name: Whole Blood - Pre-mortem blood draw

value: Blood

value: Whole Blood


title: Control BY 003

description:
Control BY_003
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood Vessel - Low post-mortem interval - SM-2QU4Z

value: Male


title: Lung - Low post-mortem interval - SM-2IZI5

source_name: Lung - Low post-mortem interval

value: Female

value: Lung


title: Control BY 001

description:
Control BY_001
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 185

description:
Mather  kq_185
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers


title: Thyroid - Low post-mortem interval - SM-2IZI7

source_name: Thyroid - Low post-mortem interval

value: 40-49 years

value: Thyroid


title: Control BY 002

description:
Control BY_002
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 183

description:
Mather  kq_183
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 184

description:
Mather  kq_184
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 181

description:
Mather  kq_181
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 180

description:
Mather  kq_180
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 179

description:
Mather  kq_179
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Nerve - Low post-mortem interval - SM-2QU33

source_name: Nerve - Tibial - Low post-mortem interval

value: Nerve

value: Nerve - Tibial


title: Mother KQ 178

description:
Mather  kq_178
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 177

description:
Mather  kq_177
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Thyroid - Low post-mortem interval - SM-2IZI9

value: 0-3 hours


title: Lung - Low post-mortem interval - SM-2IZI8


title: Skin - Low post-mortem interval - SM-2QU41

value: Skin

value: Skin - Sun Exposed (Lower leg)


title: Adipose Tissue - Low post-mortem interval - SM-2QU2Y

value: Adipose Tissue

value: Adipose - Subcutaneous


title: Nerve - Low post-mortem interval - SM-2QU43


title: Muscle - Low post-mortem interval - SM-2QU49

value: Muscle

value: Muscle - Skeletal


title: Blood - Pre-mortem blood draw - SM-2IZII

value: Blood


title: Blood Vessel - Low post-mortem interval - SM-2QU4Q

value: Blood Vessel

value: Artery - Tibial


title: Muscle - Low post-mortem interval - SM-2QU55

value: Male


title: Mother KQ 175

description:
Mather  kq_175
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: non cleft

value: blood


title: Mother KQ 174

description:
Mather  kq_174
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers


title: Thyroid - Low post-mortem interval - SM-2IZHZ

value: 40-49 years

value: Thyroid


title: Mother KQ 176

description:
Mather  kq_176
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 172

description:
Mather  kq_172
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Skin - Low post-mortem interval - SM-2QU36


title: Mother KQ 173

description:
Mather  kq_173
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Heart - Low post-mortem interval - SM-2IZI3

source_name: Heart - Left Ventricle - Low post-mortem interval

value: Heart

value: Heart - Left Ventricle


title: Mother KQ 182

description:
Mather  kq_182
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2IZJR

source_name: Brain - Cortex - Low post-mortem interval

value: Female

value: Brain

value: Brain - Cortex

value: 12-15 hours


title: Brain - Low post-mortem interval - SM-2IZJY

source_name: Brain - Cerebellum - Low post-mortem interval

value: Brain - Cerebellum


title: Mother KQ 171

description:
Mather  kq_171
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 169

description:
Mather  kq_169
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 168

description:
Mather  kq_168
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 167

description:
Mather  kq_167
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 166

description:
Mather  kq_166
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 163

description:
Mather  kq_163
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 165

description:
Mather  kq_165
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 162

description:
Mather  kq_162
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 161

description:
Mather  kq_161
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 170

description:
Mather  kq_170
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 160

description:
Mather  kq_160
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood - Pre-mortem blood draw - SM-2IZIK

value: Whole Blood


title: Lung - Low post-mortem interval - SM-2IZIE

value: Lung

value: 0-3 hours


title: Skin - Low post-mortem interval - SM-2IZJX

value: Skin

value: Skin - Sun Exposed (Lower leg)

value: 8-11 hours


title: Brain - Low post-mortem interval - SM-2IZJT

source_name: Brain - Anterior cingulate cortex (BA24) - Low post-mortem interval

value: Not Available


title: Muscle - Low post-mortem interval - SM-2QU4J

value: Muscle

value: Muscle - Skeletal


title: Mother KQ 164

description:
Mather  kq_164
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Mother KQ 158

description:
Mather  kq_158
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2IZK8

source_name: Brain - Nucleus accumbens (basal ganglia) - Low post-mortem interval

value: Female

value: 40-49 years


title: Brain - Low post-mortem interval - SM-2IZJU

source_name: Brain - Caudate (basal ganglia) - Low post-mortem interval

value: Brain

value: Brain - Caudate (basal ganglia)


title: Mother KQ 159

description:
Mather  kq_159
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 157

description:
Mather  kq_157
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Thyroid - Low post-mortem interval - SM-2IZK5

value: Thyroid

value: 12-15 hours


title: Blood Vessel - Low post-mortem interval - SM-2QU4W

value: Blood Vessel

value: Artery - Tibial


title: Lung - Low post-mortem interval - SM-2IZK1

value: Lung


title: Nerve - Low post-mortem interval - SM-2QU4M

value: Nerve

value: Nerve - Tibial


title: Brain - Low post-mortem interval - SM-2IZK3

source_name: Brain - Hypothalamus - Low post-mortem interval

value: Brain - Hypothalamus

value: Not Available


title: Brain - Low post-mortem interval - SM-2IZKA

source_name: Brain - Putamen (basal ganglia) - Low post-mortem interval

value: Brain - Putamen (basal ganglia)


title: Brain - Low post-mortem interval - SM-2IZKB

source_name: Brain - Substantia nigra - Low post-mortem interval

value: Brain - Substantia nigra


title: Adipose Tissue - Low post-mortem interval - SM-2QU2T

value: Adipose Tissue

value: Adipose - Subcutaneous

value: 8-11 hours


title: Brain - Low post-mortem interval - SM-2IZJS

source_name: Brain - Spinal cord (cervical c-1) - Low post-mortem interval

value: Female

value: 40-49 years

value: Brain - Spinal cord (cervical c-1)


title: Mother KQ 155

description:
Mather  kq_155
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Mother KQ 156

description:
Mather  kq_156
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2IZK4

source_name: Brain - Amygdala - Low post-mortem interval

value: Brain

value: Brain - Amygdala


title: Mother KQ 154

description:
Mather  kq_154
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2IZK6

source_name: Brain - Cerebellar Hemisphere - Low post-mortem interval

value: Brain - Cerebellar Hemisphere


title: Mother KQ 153

description:
Mather  kq_153
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 152

description:
Mather  kq_152
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood - Low post-mortem interval - SM-2IZK2

source_name: Whole Blood - Low post-mortem interval

value: Blood

value: Whole Blood


title: Thyroid - Low post-mortem interval - SM-2IZI6

value: 20-29 years

value: Thyroid

value: 0-3 hours


title: Mother KQ 150

description:
Mather  kq_150
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 151

description:
Mather  kq_151
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2IZJV

source_name: Brain - Hippocampus - Low post-mortem interval

value: Brain - Hippocampus

value: Not Available


title: Blood Vessel - Low post-mortem interval - SM-2QU3P

source_name: Artery - Tibial - Low post-mortem interval

value: Blood Vessel

value: Artery - Tibial

value: 4-7 hours


title: Mother KQ 144

description:
Mather  kq_144
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 146

description:
Mather  kq_146
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 147

description:
Mather  kq_147
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 142

description:
Mather  kq_142
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 141

description:
Mather  kq_141
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 140

description:
Mather  kq_140
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Lung - Low post-mortem interval - SM-2IZIB

source_name: Lung - Low post-mortem interval

value: Female

value: Lung


title: Brain - Low post-mortem interval - SM-2IZK9

source_name: Brain - Frontal Cortex (BA9) - Low post-mortem interval

value: 40-49 years

value: Brain - Frontal Cortex (BA9)


title: Heart - Low post-mortem interval - SM-2IZID

source_name: Heart - Left Ventricle - Low post-mortem interval

value: Heart

value: Heart - Left Ventricle


title: Skin - Low post-mortem interval - SM-2IZIC

source_name: Skin - Sun Exposed (Lower leg) - Low post-mortem interval

value: Skin

value: Skin - Sun Exposed (Lower leg)


title: Muscle - Low post-mortem interval - SM-2QU4C

source_name: Muscle - Skeletal - Low post-mortem interval

value: Muscle

value: Muscle - Skeletal


title: Mother KQ 139

description:
Mather  kq_139
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Mother KQ 148

description:
Mather  kq_148
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 149

description:
Mather  kq_149
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 145

description:
Mather  kq_145
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Lung - Low post-mortem interval - SM-2IZI1

value: 0-3 hours


title: Blood Vessel - Low post-mortem interval - SM-2IZJI

value: Blood Vessel


title: Muscle - Low post-mortem interval - SM-2QU4K

value: 20-29 years


title: Blood - Pre-mortem blood draw - SM-2IZHT

source_name: Whole Blood - Pre-mortem blood draw

value: Blood

value: Whole Blood


title: Heart - Low post-mortem interval - SM-2QU5E

value: Female


title: Mother KQ 143

description:
Mather  kq_143
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 137

description:
Mather  kq_137
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Nerve - Low post-mortem interval - SM-2QU3N

source_name: Nerve - Tibial - Low post-mortem interval

value: 40-49 years

value: Nerve

value: Nerve - Tibial

value: 4-7 hours


title: Thyroid - Low post-mortem interval - SM-2IZI2

source_name: Thyroid - Low post-mortem interval

value: Thyroid


title: Adipose Tissue - Low post-mortem interval - SM-2QU2S

source_name: Adipose - Subcutaneous - Low post-mortem interval

value: Adipose Tissue

value: Adipose - Subcutaneous


title: Mother KQ 138

description:
Mather  kq_138
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 136

description:
Mather  kq_136
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood - Pre-mortem blood draw - SM-2IZHS


title: Mother KQ 135

description:
Mather  kq_135
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 134

description:
Mather  kq_134
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 133

description:
Mather  kq_133
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2IZJ1

source_name: Brain - Cerebellum - Low post-mortem interval

value: 60-69 years

value: Brain

value: Brain - Cerebellum

value: 20-23 hours


title: Brain - Low post-mortem interval - SM-2M49F

source_name: Brain - Hypothalamus - Low post-mortem interval

value: Brain - Hypothalamus

value: Not Available


title: Mother KQ 131

description:
Mather  kq_131
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Mother KQ 132

description:
Mather  kq_132
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Adipose Tissue - Low post-mortem interval - SM-2IZJM

value: Female


title: Brain - Low post-mortem interval - SM-2IZIY

source_name: Brain - Cortex - Low post-mortem interval

value: Brain - Cortex


title: Mother KQ 130

description:
Mather  kq_130
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 129

description:
Mather  kq_129
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 128

description:
Mather  kq_128
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2IZJO

source_name: Brain - Substantia nigra - Low post-mortem interval

value: Brain - Substantia nigra


title: Brain - Low post-mortem interval - SM-2IZIZ

source_name: Brain - Caudate (basal ganglia) - Low post-mortem interval

value: Brain - Caudate (basal ganglia)


title: Mother KQ 125

description:
Mather  kq_125
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 126

description:
Mather  kq_126
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 124

description:
Mather  kq_124
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2IZJ2

source_name: Brain - Nucleus accumbens (basal ganglia) - Low post-mortem interval


title: Brain - Low post-mortem interval - SM-2IZIX

source_name: Brain - Anterior cingulate cortex (BA24) - Low post-mortem interval


title: Blood Vessel - Low post-mortem interval - SM-2QU3G

source_name: Artery - Tibial - Low post-mortem interval

value: 40-49 years

value: Blood Vessel

value: Artery - Tibial

value: 0-3 hours


title: Brain - Low post-mortem interval - SM-2IZIW

source_name: Brain - Hippocampus - Low post-mortem interval

value: 60-69 years

value: Brain - Hippocampus


title: Blood - Low post-mortem interval - SM-2IZJC

source_name: Whole Blood - Low post-mortem interval

value: Blood

value: Whole Blood


title: Nerve - Low post-mortem interval - SM-2QU37

value: Nerve

value: Nerve - Tibial


title: Mother KQ 123

description:
Mather  kq_123
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers


title: Muscle - Low post-mortem interval - SM-2QU4N

value: Muscle

value: Muscle - Skeletal


title: Adipose Tissue - Low post-mortem interval - SM-2QU2P

value: Female

value: Adipose Tissue

value: Adipose - Subcutaneous


title: Thyroid - Low post-mortem interval - SM-2IZIJ

value: Thyroid


title: Mother KQ 122

description:
Mather  kq_122
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: non cleft

value: blood


title: Skin - Low post-mortem interval - SM-2IZIM

value: 40-49 years

value: Skin

value: Skin - Sun Exposed (Lower leg)


title: Mother KQ 121

description:
Mather  kq_121
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 120

description:
Mather  kq_120
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 127

description:
Mather  kq_127
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 119

description:
Mather  kq_119
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood - Pre-mortem blood draw - SM-2IZJQ


title: Mother KQ 118

description:
Mather  kq_118
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 114

description:
Mather  kq_114
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 115

description:
Mather  kq_115
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 116

description:
Mather  kq_116
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Heart - Low post-mortem interval - SM-2IZIG

source_name: Heart - Left Ventricle - Low post-mortem interval

value: 20-29 years

value: Heart

value: Heart - Left Ventricle

value: 0-3 hours


title: Mother KQ 117

description:
Mather  kq_117
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood Vessel - Low post-mortem interval - SM-2QU4X

value: Blood Vessel

value: Artery - Tibial

value: 4-7 hours


title: Mother KQ 113

description:
Mather  kq_113
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers


title: Blood - Pre-mortem blood draw - SM-2IZHR

value: Female

value: Blood

value: Whole Blood


title: Skin - Low post-mortem interval - SM-2QU4P

source_name: Skin - Sun Exposed (Lower leg) - Low post-mortem interval


title: Thyroid - Low post-mortem interval - SM-2IZIF

value: Thyroid


title: Muscle - Low post-mortem interval - SM-2QU4Y

source_name: Muscle - Skeletal - Low post-mortem interval

value: Male

value: Muscle

value: Muscle - Skeletal


title: Blood Vessel - Low post-mortem interval - SM-2QU39


title: Mother KQ 112

description:
Mather  kq_112
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: non cleft

value: blood


title: Mother KQ 108

description:
Mather  kq_108
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 111

description:
Mather  kq_111
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 110

description:
Mather  kq_110
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 107

description:
Mather  kq_107
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 109

description:
Mather  kq_109
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 106

description:
Mather  kq_106
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 105

description:
Mather  kq_105
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Skin - Low post-mortem interval - SM-2IZJD

value: 20-29 years

value: Skin

value: Skin - Sun Exposed (Lower leg)


title: Mother KQ 104

description:
Mather  kq_104
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 102

description:
Mather  kq_102
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 103

description:
Mather  kq_103
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 100

description:
Mather  kq_100
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 101

description:
Mather  kq_101
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Lung - Low post-mortem interval - SM-2IZHN

source_name: Lung - Low post-mortem interval

value: Lung

value: 0-3 hours


title: Lung - Low post-mortem interval - SM-2XV5D

value: 40-49 years

value: 8-11 hours


title: Brain - Low post-mortem interval - SM-2XV6F

value: Brain

value: Brain - Cortex

value: 12-15 hours


title: Blood Vessel - Low post-mortem interval - SM-2XV5G

value: Blood Vessel

value: Artery - Tibial


title: Mother KQ 099

description:
Mather  kq_099
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers


title: Heart - Low post-mortem interval - SM-2XV5E

value: Male

value: Heart

value: Heart - Left Ventricle


title: Nerve - Low post-mortem interval - SM-2XV4R

source_name: Nerve - Tibial - Low post-mortem interval

value: Nerve

value: Nerve - Tibial


title: Brain - Low post-mortem interval - SM-2XV6W

value: Brain - Cerebellum


title: Nerve - Low post-mortem interval - SM-2QU3A

value: 20-29 years

value: 4-7 hours


title: Brain - Low post-mortem interval - SM-2XV6T

value: Brain - Caudate (basal ganglia)

value: Not Available


title: Skin - Low post-mortem interval - SM-2XV68

value: 40-49 years

value: Skin

value: Skin - Sun Exposed (Lower leg)

value: 8-11 hours


title: Mother KQ 098

description:
Mather  kq_098
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: non cleft

value: blood


title: Blood - Pre-mortem blood draw - SM-2IZHL

source_name: Whole Blood - Pre-mortem blood draw

value: Blood

value: Whole Blood


title: Lung - Low post-mortem interval - SM-2QU4R

value: Male

value: 50-59 years

value: Lung


title: Heart - Low post-mortem interval - SM-2M48V

value: Heart

value: Heart - Left Ventricle


title: Mother KQ 097

description:
Mather  kq_097
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers


title: Mother KQ 095

description:
Mather  kq_095
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Brain - Low post-mortem interval - SM-2XV5W

value: Brain

value: Brain - Hippocampus


title: Mother KQ 094

description:
Mather  kq_094
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood - Low post-mortem interval - SM-2XV5H


title: Mother KQ 093

description:
Mather  kq_093
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Thyroid - Low post-mortem interval - SM-2M48T

source_name: Thyroid - Low post-mortem interval

value: Thyroid


title: Nerve - Low post-mortem interval - SM-2QU42

value: Nerve

value: Nerve - Tibial

value: 4-7 hours


title: Blood Vessel - Low post-mortem interval - SM-2QU4G

value: Blood Vessel

value: Artery - Tibial


title: Skin - Low post-mortem interval - SM-2M48X

value: Skin

value: Skin - Sun Exposed (Lower leg)


title: Brain - Low post-mortem interval - SM-2XV66

value: 40-49 years

value: Brain - Anterior cingulate cortex (BA24)

value: Not Available


title: Mother KQ 091

description:
Mather  kq_091
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: non cleft

value: blood


title: Mother KQ 092

description:
Mather  kq_092
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 089

description:
Mather  kq_089
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 088

description:
Mather  kq_088
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 090

description:
Mather  kq_090
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 096

description:
Mather  kq_096
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 087

description:
Mather  kq_087
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 086

description:
Mather  kq_086
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 085

description:
Mather  kq_085
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 084

description:
Mather  kq_084
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 083

description:
Mather  kq_083
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 082

description:
Mather  kq_082
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Lung - Low post-mortem interval - SM-2XV5C

value: Male

value: 60-69 years

value: Lung

value: 8-11 hours


title: Adipose Tissue - Low post-mortem interval - SM-2QU32

source_name: Adipose - Subcutaneous - Low post-mortem interval

value: Female

value: 20-29 years

value: Adipose Tissue

value: Adipose - Subcutaneous


title: Nerve - Low post-mortem interval - SM-2XV4T

value: Nerve

value: Nerve - Tibial


title: Skin - Low post-mortem interval - SM-2M48S

value: Skin

value: 4-7 hours


title: Nerve - Low post-mortem interval - SM-2QU3S


title: Thyroid - Low post-mortem interval - SM-2XV4Y

value: Thyroid


title: Muscle - Low post-mortem interval - SM-2QU46

value: 50-59 years

value: Muscle

value: Muscle - Skeletal


title: Mother KQ 078

description:
Mather  kq_078
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Muscle - Low post-mortem interval - SM-2XV5Y

value: Male

value: 60-69 years


title: Mother KQ 081

description:
Mather  kq_081
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 080

description:
Mather  kq_080
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood Vessel - Low post-mortem interval - SM-2QU4E

value: Female

value: Blood Vessel

value: Artery - Tibial


title: Blood - Low post-mortem interval - SM-2XV6I

value: Blood

value: Whole Blood

value: 8-11 hours


title: Mother KQ 077

description:
Mather  kq_077
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 075

description:
Mather  kq_075
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 073

description:
Mather  kq_073
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Heart - Low post-mortem interval - SM-2M48U

value: 20-29 years

value: Heart

value: Heart - Left Ventricle

value: 0-3 hours


title: Mother KQ 074

description:
Mather  kq_074
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 076

description:
Mather  kq_076
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Nerve - Low post-mortem interval - SM-2QU2Z

value: 30-39 years

value: Nerve

value: Nerve - Tibial

value: 4-7 hours


title: Blood - Pre-mortem blood draw - SM-2M48W


title: Mother KQ 072

description:
Mather  kq_072
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Skin - Low post-mortem interval - SM-2QU4V

value: Male

value: Skin

value: Skin - Sun Exposed (Lower leg)


title: Lung - Low post-mortem interval - SM-2QU4T

value: Female

value: Lung


title: Mother KQ 070

description:
Mather  kq_070
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 071

description:
Mather  kq_071
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 069

description:
Mather  kq_069
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Lung - Low post-mortem interval - SM-2M48R


title: Muscle - Low post-mortem interval - SM-2M48L

value: 50-59 years

value: Muscle

value: Muscle - Skeletal


title: Muscle - Low post-mortem interval - SM-2QU3D


title: Blood - Pre-mortem blood draw - SM-2M48J

value: 20-29 years

value: Blood

value: Whole Blood


title: Mother KQ 067

description:
Mather  kq_067
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 066

description:
Mather  kq_066
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 068

description:
Mather  kq_068
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 065

description:
Mather  kq_065
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Lung - Low post-mortem interval - SM-2M48O

value: 0-3 hours


title: Skin - Low post-mortem interval - SM-2M48B


title: Heart - Low post-mortem interval - SM-2M48N

value: Heart

value: Heart - Left Ventricle


title: Blood - Pre-mortem blood draw - SM-2M47Y


title: Mother KQ 079

description:
Mather  kq_079
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers


title: Lung - Low post-mortem interval - SM-2QU59

value: 8-11 hours


title: Blood Vessel - Low post-mortem interval - SM-2QU2W

value: Blood Vessel

value: Artery - Tibial


title: Muscle - Low post-mortem interval - SM-2QU4F


title: Mother KQ 062

description:
Mather  kq_062
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: non cleft

value: blood


title: Mother KQ 063

description:
Mather  kq_063
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 060

description:
Mather  kq_060
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 059

description:
Mather  kq_059
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 061

description:
Mather  kq_061
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 064

description:
Mather  kq_064
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Adipose Tissue - Low post-mortem interval - SM-2M482

value: Female

value: Adipose Tissue

value: Adipose - Subcutaneous


title: Mother KQ 058

description:
Mather  kq_058
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood - Low post-mortem interval - SM-2M481

value: Male

value: 50-59 years


title: Skin - Low post-mortem interval - SM-2QU4D

value: Skin

value: Skin - Sun Exposed (Lower leg)


title: Mother KQ 054

description:
Mather  kq_054
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 057

description:
Mather  kq_057
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 055

description:
Mather  kq_055
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 056

description:
Mather  kq_056
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 053

description:
Mather  kq_053
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 051

description:
Mather  kq_051
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 050

description:
Mather  kq_050
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Nerve - Low post-mortem interval - SM-2M48C

value: 40-49 years

value: Nerve

value: Nerve - Tibial


title: Mother KQ 049

description:
Mather  kq_049
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Heart - Low post-mortem interval - SM-2M48K

value: Heart

value: Heart - Left Ventricle


title: Muscle - Low post-mortem interval - SM-2M489

value: Muscle

value: Muscle - Skeletal

value: 8-11 hours


title: Blood Vessel - Low post-mortem interval - SM-2M48A

value: Blood Vessel

value: Artery - Tibial


title: Thyroid - Low post-mortem interval - SM-2IZIN

value: Female

value: Thyroid

value: 0-3 hours


title: Mother KQ 048

description:
Mather  kq_048
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Lung - Low post-mortem interval - SM-2M48P

value: Lung


title: Mother KQ 046

description:
Mather  kq_046
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood - Low post-mortem interval - SM-2M49N

value: 40-49 years

value: Blood

value: Whole Blood

value: 4-7 hours


title: Blood - Low post-mortem interval - SM-2M47Z

value: 50-59 years


title: Mother KQ 052

description:
Mather  kq_052
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Thyroid - Low post-mortem interval - SM-2M48Q


title: Thyroid - Low post-mortem interval - SM-2M48M


title: Mother KQ 045

description:
Mather  kq_045
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Muscle - Low post-mortem interval - SM-2M47E

value: Muscle


title: Lung - Low post-mortem interval - SM-2D443


title: Nerve - Low post-mortem interval - SM-2M47C

value: Nerve

value: Nerve - Tibial


title: Adipose Tissue - Low post-mortem interval - SM-2D446

value: Adipose Tissue

value: Adipose - Subcutaneous


title: Thyroid - Low post-mortem interval - SM-2D43V

value: Male

value: 60-69 years


title: Blood Vessel - Low post-mortem interval - SM-2M478

value: Female

value: Blood Vessel

value: Artery - Tibial

value: 0-3 hours


title: Lung - Low post-mortem interval - SM-2D43T

value: Lung


title: Blood Vessel - Low post-mortem interval - SM-2M475


title: Muscle - Low post-mortem interval - SM-2M474

value: Muscle - Skeletal


title: Mother KQ 043

description:
Mather  kq_043
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Heart - Low post-mortem interval - SM-2D43U

value: Heart

value: Heart - Left Ventricle


title: Blood - Pre-mortem blood draw - SM-2D447

value: Blood

value: Whole Blood


title: Mother KQ 047

description:
Mather  kq_047
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 042

description:
Mather  kq_042
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 041

description:
Mather  kq_041
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 040

description:
Mather  kq_040
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 044

description:
Mather  kq_044
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Lung - Low post-mortem interval - SM-2M49Q

value: 4-7 hours


title: Mother KQ 039

description:
Mather  kq_039
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: C57_mucosa_10

city: Nuthetal

first: Gunnar

last: Loh

address: Arthur-Scheunert-Allee 114-116

department: Gastrointestinal Microbiology

country: Germany

institute: German Institute of Human Nutrition

hyb_protocol: 12.5 to 20 µg cRNA were used for further fragmentation and finally 10 µg for hybridization, washing and staining (Affymetrix fluidics Station 400)

scan_protocol: Absolute values of expression were calculated from the scanned array using the Affymetrix Command Console v1 software. Affymetrix arrays were scanned using the Affymetrix 3000G scanner.

data_processing: nugomm1a520177 affymetrix arrays were analyzed with nugomm1a520177mmentrezg custom cdf) and  quality checked and evaluated in R (version 2.15.2) with Bioconductor (version 2.11) tools.Data was quality checked with affy/affyplm and normalised with Robust Multichip Average (RMA).

organism: Mus musculus

source_name: colon mucusa

label_protocol: The Affymetrix Eukaryotic One-Cycle Target Labeling and Control Reagents (#900493) were used to synthesize cDNA. 2µg RNA from each sample were used.

extract_protocol: Extraction of total RNA with the NucleoSpin RNA II Kit (Machery-Nagel, Duren, Germany) was performed according to the manufacturer's instructions

value: colon mucusa

tag: strain


title: Mother KQ 038

description:
Mather  kq_038
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: C57_mucosa_9


title: Mother KQ 037

description:
Mather  kq_037
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 036

description:
Mather  kq_036
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 035

description:
Mather  kq_035
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: C57_mucosa_11


title: C57_mucosa_8


title: Adipose Tissue - Low post-mortem interval - SM-2M47O

value: Male

value: Adipose Tissue

value: Adipose - Subcutaneous


title: Mother KQ 033

description:
Mather  kq_033
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 034

description:
Mather  kq_034
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 031

description:
Mather  kq_031
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: C57_mucosa_6


title: Mother KQ 032

description:
Mather  kq_032
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Blood - Low post-mortem interval - SM-2M49O

value: 60-69 years


title: C57_mucosa_5


title: C57_mucosa_7


title: Muscle - Low post-mortem interval - SM-2M49P

value: Muscle


title: Mother KQ 030

description:
Mather  kq_030
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 029

description:
Mather  kq_029
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 028

description:
Mather  kq_028
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 027

description:
Mather  kq_027
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 024

description:
Mather  kq_024
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Muscle - Low post-mortem interval - SM-2D43W


title: Mother KQ 025

description:
Mather  kq_025
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 023

description:
Mather  kq_023
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Skin - Low post-mortem interval - SM-2M47P

value: Skin

value: Skin - Sun Exposed (Lower leg)


title: Mother KQ 022

description:
Mather  kq_022
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Thyroid - Low post-mortem interval - SM-2D445

value: Thyroid

value: 0-3 hours


title: C57_mucosa_2


title: C57_mucosa_4


title: C57_mucosa_1


title: Heart - Low post-mortem interval - SM-2D43Y


title: Lung - Low post-mortem interval - SM-2D449

value: Lung


title: Mother KQ 020

description:
Mather  kq_020
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.

value: mothers

value: non cleft

value: blood


title: Mother KQ 021

description:
Mather  kq_021
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: C3H_mucosa_12


title: Blood - Pre-mortem blood draw - SM-2D45X

value: Blood


title: Mother KQ 018

description:
Mather  kq_018
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 026

description:
Mather  kq_026
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: C57_mucosa_3


title: Mother KQ 017

description:
Mather  kq_017
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Skin - Low post-mortem interval - SM-2M47B


title: C3H_mucosa_11


title: C3H_mucosa_10


title: Blood Vessel - Low post-mortem interval - SM-2M47G

value: Female

value: 30-39 years

value: Blood Vessel

value: Artery - Tibial


title: Mother KQ 015

description:
Mather  kq_015
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 016

description:
Mather  kq_016
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 014

description:
Mather  kq_014
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Mother KQ 013

description:
Mather  kq_013
In this array, each tag of allele was spotted reduplicate. We take the mean single of the two spots as the single of allele.The AF was calculated by the formula: AF=allele B/allele A + allele B. While the AF values >0.6, genotypes were allele B homozygote; AF values <0.4, genotypes were allele A homozygote; AF values were between 0.4 and 0.6, genotypes were heterozygote.


title: Nerve - Low post-mortem interval - SM-2M47H

value: Nerve

value: Nerve - Tibial