title: 0312V011012_IFNb_20121119_n62_01_02.RCC


title: 1650V011012_IFNb_20121119_n62_01_01.RCC

status: Public on Mar 01 2014

type: RNA

city: Cambridge

first: Nir

last: Hacohen

state: MA

address: 7 Cambridge Center

country: USA

institute: Broad Institute

hyb_protocol: Lysates in Qiagen RLT buffer were hybridized for 12-24 hours with custom nCounter Gene Expression CodeSets.

scan_protocol: Nanostring nCounter system (Nanostring; Seattle, WA) was used to digitally count transcripts in a multiplex reaction.

data_processing: The raw data is first scaled by positive spike-ins, shifted by negative spike-ins, and a negative binomial is fit using DESeq based on the scale parameter estimated from the positive spike-ins

molecule: total RNA

organism: Homo sapiens

growth_protocol: Monocyte-derived dendritic cells from each donor were cultured for 7 days in RPMI supplemented with 10% FBS, 100 ng/mL GM-CSF and 40 ng/mL IL-4.

extract_protocol: Total RNA was isolated using Qiagen RNeasy columns.

treatment_protocol: MoDCs were stimulated with 15 ng/mL LPS for 2.5 h or 5 h, influenza virus for 10 h, 100 U/mL IFNβ for 6.5 h, or left unstimulated.

tag: stimulation

value: IFNb

tag: hours

tag: plate

tag: cartridge

tag: lane

tag: date of visit

tag: time of visit

tag: gender

value: F

tag: age (years)

tag: ethnicity

value: Caucasian

tag: million pbmc

tag: million dcs

tag: height (cm)

tag: weight (kg)

tag: systolic/diastolic

tag: bmi


title: 1505V121511_IFNb_20121119_n61_01_10.RCC


title: 0330V121511_IFNb_20121119_n61_01_09.RCC


title: 0272V011012_IFNb_20121119_n61_01_12.RCC

value: M


title: 1317V121411_IFNb_20121119_n61_01_08.RCC

value: East Asian


title: 1488V121411_IFNb_20121119_n61_01_06.RCC


title: 1142V121411_IFNb_20121119_n61_01_07.RCC


title: 1224V011112_IFNb_20121119_n62_01_04.RCC


title: 0638V121311_IFNb_20121119_n61_01_04.RCC


title: 1467V121411_IFNb_20121119_n61_01_05.RCC


title: 1297V120711_IFNb_20121119_n60_01_08.RCC


title: 1607V120811_IFNb_20121119_n60_01_09.RCC


title: 1248V121311_IFNb_20121119_n61_01_02.RCC


title: 1502V120811_IFNb_20121119_n60_01_12.RCC


title: 1594V120811_IFNb_20121119_n60_01_10.RCC


title: 0514V120711_IFNb_20121119_n60_01_07.RCC


title: 1580V120811_IFNb_20121119_n60_01_11.RCC


title: 1575V120711_IFNb_20121119_n60_01_05.RCC


title: 1603V120711_IFNb_20121119_n60_01_04.RCC

value: African-American


title: 1491V120711_IFNb_20121119_n60_01_03.RCC


title: 0374V121311_IFNb_20121119_n61_01_03.RCC


title: 1597V120611_IFNb_20121119_n59_01_10.RCC


title: 1563V120611_IFNb_20121119_n59_01_09.RCC


title: 1290V120611_IFNb_20121119_n59_01_11.RCC


title: 0501V120811_IFNb_20121119_n61_01_01.RCC


title: 0697V120611_IFNb_20121119_n60_01_02.RCC


title: 1348V102611_IFNb_20121119_n59_01_06.RCC


title: 0679V120611_IFNb_20121119_n59_01_12.RCC


title: 1274V102611_IFNb_20121119_n59_01_07.RCC


title: 1573V120711_IFNb_20121119_n60_01_06.RCC


title: 0277V102511_IFNb_20121119_n59_01_05.RCC


title: 1277V102511_IFNb_20121119_n59_01_03.RCC


title: 1366V102611_IFNb_20121119_n59_01_08.RCC


title: 1327V102011_IFNb_20121119_n58_01_12.RCC


title: 1319V120611_IFNb_20121119_n60_01_01.RCC


title: 1509V101811_IFNb_20121119_n58_01_05.RCC


title: 1512V102511_IFNb_20121119_n59_01_04.RCC


title: 1519V101311_IFNb_20121119_n58_01_02.RCC


title: 1370V101311_IFNb_20121119_n58_01_01.RCC


title: 0615V102511_IFNb_20121119_n59_01_02.RCC


title: 1256V101311_IFNb_20121118_n57_01_12.RCC


title: 1302V101911_IFNb_20121119_n58_01_07.RCC


title: 1214V101211_IFNb_20121118_n57_01_09.RCC


title: 0627V101311_IFNb_20121118_n57_01_11.RCC


title: 1514V101211_IFNb_20121118_n57_01_07.RCC


title: 1511V100611_IFNb_20121118_n57_01_05.RCC


title: 0641V101811_IFNb_20121119_n58_01_04.RCC


title: 1360V102011_IFNb_20121119_n58_01_11.RCC


title: 1380V101911_IFNb_20121119_n58_01_06.RCC


title: 1224V011112_dNS1_20121118_n56_01_12.RCC


title: 1077V101911_IFNb_20121119_n58_01_10.RCC


title: 1293V101911_IFNb_20121119_n58_01_08.RCC


title: 1008V101911_IFNb_20121119_n58_01_09.RCC


title: 1652V011912_dNS1_20121118_n57_01_02.RCC


title: 0495V100611_IFNb_20121118_n57_01_04.RCC


title: 1501V011112_dNS1_20121118_n57_01_01.RCC


title: 0731V012412_dNS1_20121118_n57_01_03.RCC


title: 1350V011012_dNS1_20121118_n56_01_11.RCC


title: 1650V011012_dNS1_20121118_n56_01_09.RCC


title: 0312V011012_dNS1_20121118_n56_01_10.RCC


title: 0272V011012_dNS1_20121118_n56_01_08.RCC


title: 1440V101211_IFNb_20121118_n57_01_08.RCC


title: 1489V101211_IFNb_20121118_n57_01_10.RCC


title: 0330V121511_dNS1_20121118_n56_01_05.RCC


title: 0775V121511_dNS1_20121118_n56_01_07.RCC


title: 0874V121411_dNS1_20121118_n56_01_03.RCC


title: 1317V121411_dNS1_20121118_n56_01_04.RCC


title: 1294V121411_dNS1_20121118_n56_01_02.RCC


title: 1505V121511_dNS1_20121118_n56_01_06.RCC


title: 1487V121411_dNS1_20121118_n55_01_12.RCC


title: 1488V121411_dNS1_20121118_n55_01_11.RCC


title: 1142V121411_dNS1_20121118_n56_01_01.RCC


title: 0638V121311_dNS1_20121118_n55_01_09.RCC


title: 1248V121311_dNS1_20121118_n55_01_07.RCC


title: 0374V121311_dNS1_20121118_n55_01_08.RCC


title: 0501V120811_dNS1_20121118_n55_01_06.RCC


title: 1467V121411_dNS1_20121118_n55_01_10.RCC


title: 1502V120811_dNS1_20121118_n55_01_05.RCC


title: 1594V120811_dNS1_20121118_n55_01_03.RCC


title: 1607V120811_dNS1_20121118_n55_01_02.RCC


title: 1297V120711_dNS1_20121118_n55_01_01.RCC


title: 0514V120711_dNS1_20121118_n54_01_12.RCC


title: 0697V120611_dNS1_20121118_n54_01_07.RCC


title: 1491V120711_dNS1_20121118_n54_01_08.RCC


title: 1603V120711_dNS1_20121118_n54_01_09.RCC


title: 1575V120711_dNS1_20121118_n54_01_10.RCC


title: 1597V120611_dNS1_20121118_n54_01_03.RCC


title: 1290V120611_dNS1_20121118_n54_01_04.RCC


title: 0679V120611_dNS1_20121118_n54_01_05.RCC


title: 1580V120811_dNS1_20121118_n55_01_04.RCC


title: 1319V120611_dNS1_20121118_n54_01_06.RCC


title: 1274V102611_dNS1_20121118_n53_01_12.RCC


title: 1348V102611_dNS1_20121118_n53_01_11.RCC


title: 1563V120611_dNS1_20121118_n54_01_02.RCC


title: 1573V120711_dNS1_20121118_n54_01_11.RCC


title: 1366V102611_dNS1_20121118_n54_01_01.RCC


title: 0277V102511_dNS1_20121118_n53_01_10.RCC


title: 1498V102011_dNS1_20121118_n53_01_06.RCC


title: 0615V102511_dNS1_20121118_n53_01_07.RCC


title: 1277V102511_dNS1_20121118_n53_01_08.RCC


title: 1077V101911_dNS1_20121118_n53_01_03.RCC


title: 1512V102511_dNS1_20121118_n53_01_09.RCC


title: 1360V102011_dNS1_20121118_n53_01_04.RCC


title: 1008V101911_dNS1_20121118_n53_01_02.RCC


title: 1327V102011_dNS1_20121118_n53_01_05.RCC


title: 1302V101911_dNS1_20121118_n52_01_12.RCC


title: 1293V101911_dNS1_20121118_n53_01_01.RCC


title: 1509V101811_dNS1_20121118_n52_01_10.RCC


title: 1519V101311_dNS1_20121118_n52_01_07.RCC


title: 1530V101811_dNS1_20121118_n52_01_08.RCC


title: 0627V101311_dNS1_20121118_n52_01_04.RCC


title: 1256V101311_dNS1_20121118_n52_01_05.RCC


title: 1370V101311_dNS1_20121118_n52_01_06.RCC


title: 0329V101311_dNS1_20121118_n52_01_03.RCC


title: 1214V101211_dNS1_20121118_n52_01_01.RCC


title: 1440V101211_dNS1_20121118_n51_01_12.RCC


title: 1489V101211_dNS1_20121118_n52_01_02.RCC


title: 1515V101111_dNS1_20121118_n51_01_10.RCC


title: 1514V101211_dNS1_20121118_n51_01_11.RCC


title: 1447V100611_dNS1_20121118_n51_01_08.RCC


title: 0641V101811_dNS1_20121118_n52_01_09.RCC


title: 1652V011912_LPS_20121118_n51_01_05.RCC

value: LPS


title: 0312V011012_LPS_20121118_n51_01_01.RCC


title: 1224V011112_LPS_20121118_n51_01_03.RCC


title: 1501V011112_LPS_20121118_n51_01_04.RCC


title: 0731V012412_LPS_20121118_n51_01_06.RCC


title: 1650V011012_LPS_20121117_n50_01_11.RCC


title: 0272V011012_LPS_20121117_n50_01_10.RCC


title: 1511V100611_dNS1_20121118_n51_01_09.RCC


title: 1380V101911_dNS1_20121118_n52_01_11.RCC


title: 1317V121411_LPS_20121117_n50_01_06.RCC


title: 1630V011012_LPS_20121117_n50_01_12.RCC


title: 0495V100611_dNS1_20121118_n51_01_07.RCC


title: 0330V121511_LPS_20121117_n50_01_07.RCC


title: 1505V121511_LPS_20121117_n50_01_08.RCC


title: 1294V121411_LPS_20121117_n50_01_04.RCC


title: 1142V121411_LPS_20121117_n50_01_03.RCC


title: 0874V121411_LPS_20121117_n50_01_05.RCC


title: 1487V121411_LPS_20121117_n50_01_02.RCC


title: 1488V121411_LPS_20121117_n50_01_01.RCC


title: 0638V121311_LPS_20121116_n49_01_11.RCC


title: 1467V121411_LPS_20121116_n49_01_12.RCC


title: 0775V121511_LPS_20121117_n50_01_09.RCC


title: 0374V121311_LPS_20121116_n49_01_10.RCC


title: 0501V120811_LPS_20121116_n49_01_08.RCC


title: 1502V120811_LPS_20121116_n49_01_07.RCC


title: 1573V120711_LPS_20121116_n49_01_01.RCC


title: 1575V120711_LPS_20121116_n48_01_12.RCC


title: 0514V120711_LPS_20121116_n49_01_02.RCC


title: 1297V120711_LPS_20121116_n49_01_03.RCC


title: 1580V120811_LPS_20121116_n49_01_06.RCC


title: 1594V120811_LPS_20121116_n49_01_05.RCC


title: 1603V120711_LPS_20121116_n48_01_11.RCC


title: 0697V120611_LPS_20121116_n48_01_08.RCC


title: 1606V120711_LPS_20121116_n48_01_10.RCC


title: 1491V120711_LPS_20121116_n48_01_09.RCC


title: 1290V120611_LPS_20121116_n48_01_04.RCC


title: 1591V120611_LPS_20121116_n48_01_07.RCC


title: 1563V120611_LPS_20121116_n48_01_02.RCC


title: 1319V120611_LPS_20121116_n48_01_06.RCC


title: 1597V120611_LPS_20121116_n48_01_03.RCC


title: 1524V102611_LPS_20121116_n48_01_01.RCC


title: 1248V121311_LPS_20121116_n49_01_09.RCC


title: 0679V120611_LPS_20121116_n48_01_05.RCC


title: 1366V102611_LPS_20121116_n47_01_12.RCC


title: 1274V102611_LPS_20121116_n47_01_11.RCC


title: 1607V120811_LPS_20121116_n49_01_04.RCC


title: 1348V102611_LPS_20121116_n47_01_09.RCC


title: 0948V102611_LPS_20121116_n47_01_10.RCC


title: 1512V102511_LPS_20121116_n47_01_07.RCC


title: 0277V102511_LPS_20121116_n47_01_08.RCC


title: 1277V102511_LPS_20121116_n47_01_06.RCC


title: 1498V102011_LPS_20121116_n47_01_04.RCC


title: 0615V102511_LPS_20121116_n47_01_05.RCC


title: 1360V102011_LPS_20121116_n47_01_02.RCC


title: 1008V101911_LPS_20121116_n46_01_12.RCC


title: 1302V101911_LPS_20121116_n46_01_10.RCC


title: 1293V101911_LPS_20121116_n46_01_11.RCC


title: 1519V101311_LPS_20121116_n46_01_05.RCC


title: 1380V101911_LPS_20121116_n46_01_09.RCC


title: 1530V101811_LPS_20121116_n46_01_06.RCC


title: 0627V101311_LPS_20121116_n46_01_02.RCC


title: 1370V101311_LPS_20121116_n46_01_04.RCC


title: 1256V101311_LPS_20121116_n46_01_03.RCC


title: 1214V101211_LPS_20121115_n45_01_11.RCC


title: 0641V101811_LPS_20121116_n46_01_07.RCC


title: 0329V101311_LPS_20121116_n46_01_01.RCC


title: 1489V101211_LPS_20121115_n45_01_12.RCC


title: 1440V101211_LPS_20121115_n45_01_10.RCC


title: 1514V101211_LPS_20121115_n45_01_09.RCC


title: 1530V101811_IFNb_20121119_n58_01_03.RCC


title: 1515V101111_LPS_20121115_n45_01_08.RCC


title: 1400V101111_LPS_20121115_n45_01_06.RCC


title: 1511V100611_LPS_20121115_n45_01_05.RCC


title: 1257V101111_LPS_20121115_n45_01_07.RCC


title: 1447V100611_LPS_20121115_n45_01_04.RCC


title: 1498V102011_IFNb_20121119_n59_01_01.RCC


title: 1515V101111_IFNb_20121118_n57_01_06.RCC


title: 0860V100611_LPS_20121115_n45_01_02.RCC


title: 1509V101811_LPS_20121116_n46_01_08.RCC


title: 0495V100611_LPS_20121115_n45_01_03.RCC


title: 1652V011912_unstim_20121115_n44_01_10.RCC

value: unstim


title: 0731V012412_unstim_20121115_n44_01_11.RCC


title: 1174V100411_LPS_20121115_n44_01_12.RCC


title: 1224V011112_unstim_20121115_n44_01_08.RCC


title: 1350V011012_unstim_20121115_n44_01_07.RCC


title: 0312V011012_unstim_20121115_n44_01_06.RCC


title: 0330V121511_unstim_20121115_n43_01_11.RCC


title: 1317V121411_unstim_20121115_n43_01_10.RCC


title: 1630V011012_unstim_20121115_n44_01_05.RCC


title: 0272V011012_unstim_20121115_n44_01_02.RCC


title: 1346V011012_unstim_20121115_n44_01_03.RCC


title: 1505V121511_unstim_20121115_n43_01_12.RCC


title: 0775V121511_unstim_20121115_n44_01_01.RCC


title: 0874V121411_unstim_20121115_n43_01_09.RCC


title: 1403V100411_LPS_20121115_n45_01_01.RCC


title: 1487V121411_unstim_20121115_n43_01_06.RCC


title: 1142V121411_unstim_20121115_n43_01_07.RCC


title: 1294V121411_unstim_20121115_n43_01_08.RCC


title: 1488V121411_unstim_20121115_n43_01_05.RCC


title: 1467V121411_unstim_20121115_n43_01_04.RCC


title: 0638V121311_unstim_20121115_n43_01_03.RCC


title: 0374V121311_unstim_20121115_n43_01_02.RCC


title: 1501V011112_unstim_20121115_n44_01_09.RCC


title: 1506V121311_unstim_20121115_n43_01_01.RCC


title: 1248V121311_unstim_20121115_n42_01_12.RCC


title: 0501V120811_unstim_20121115_n42_01_11.RCC


title: 1650V011012_unstim_20121115_n44_01_04.RCC


title: 1077V101911_LPS_20121116_n47_01_01.RCC


title: 1327V102011_LPS_20121116_n47_01_03.RCC


title: 1594V120811_unstim_20121115_n42_01_08.RCC


title: 1580V120811_unstim_20121115_n42_01_09.RCC


title: 1502V120811_unstim_20121115_n42_01_10.RCC


title: 1607V120811_unstim_20121115_n42_01_07.RCC


title: 1297V120711_unstim_20121115_n42_01_06.RCC


title: 0514V120711_unstim_20121115_n42_01_05.RCC


title: 1603V120711_unstim_20121115_n42_01_02.RCC


title: 1573V120711_unstim_20121115_n42_01_04.RCC


title: 1575V120711_unstim_20121115_n42_01_03.RCC


title: 1606V120711_unstim_20121115_n42_01_01.RCC


title: 1597V120611_unstim_20121113_n41_01_06.RCC


title: 1491V120711_unstim_20121113_n41_01_12.RCC


title: 1591V120611_unstim_20121113_n41_01_10.RCC


title: 1290V120611_unstim_20121113_n41_01_07.RCC


title: 1366V102611_unstim_20121113_n41_01_03.RCC


title: 1563V120611_unstim_20121113_n41_01_05.RCC


title: 1348V102611_unstim_20121113_n40_01_12.RCC


title: 1524V102611_unstim_20121113_n41_01_04.RCC


title: 0948V102611_unstim_20121113_n41_01_01.RCC


title: 1512V102511_unstim_20121113_n40_01_10.RCC


title: 1277V102511_unstim_20121113_n40_01_09.RCC


title: 0679V120611_unstim_20121113_n41_01_08.RCC


title: 0277V102511_unstim_20121113_n40_01_11.RCC


title: 1319V120611_unstim_20121113_n41_01_09.RCC


title: 1274V102611_unstim_20121113_n41_01_02.RCC


title: 0697V120611_unstim_20121113_n41_01_11.RCC


title: 0615V102511_unstim_20121113_n40_01_08.RCC


title: 1498V102011_unstim_20121113_n40_01_07.RCC


title: 1327V102011_unstim_20121113_n40_01_06.RCC


title: 1008V101911_unstim_20121113_n40_01_03.RCC


title: 1077V101911_unstim_20121113_n40_01_04.RCC


title: 1293V101911_unstim_20121113_n40_01_02.RCC


title: 0641V101811_unstim_20121113_n39_01_10.RCC


title: 1509V101811_unstim_20121113_n39_01_11.RCC


title: 1519V101311_unstim_20121113_n39_01_08.RCC


title: 1380V101911_unstim_20121113_n39_01_12.RCC


title: 1530V101811_unstim_20121113_n39_01_09.RCC


title: 1302V101911_unstim_20121113_n40_01_01.RCC


title: 1370V101311_unstim_20121113_n39_01_07.RCC


title: 1256V101311_unstim_20121113_n39_01_06.RCC


title: 0627V101311_unstim_20121113_n39_01_05.RCC


title: 1214V101211_unstim_20121113_n39_01_02.RCC


title: 1489V101211_unstim_20121113_n39_01_03.RCC


title: 1350V011012_LPS_20121118_n51_01_02.RCC


title: 1257V101111_unstim_20121113_n38_01_10.RCC


title: 1515V101111_unstim_20121113_n38_01_11.RCC


title: 1360V102011_unstim_20121113_n40_01_05.RCC


title: 1440V101211_unstim_20121113_n39_01_01.RCC


title: 1400V101111_unstim_20121113_n38_01_09.RCC


title: 1511V100611_unstim_20121113_n38_01_08.RCC


title: 0495V100611_unstim_20121113_n38_01_06.RCC


title: 1447V100611_unstim_20121113_n38_01_07.RCC


title: 0860V100611_unstim_20121113_n38_01_05.RCC


title: 1389V071911_LPS_20121012_n37_01_12.RCC


title: 1450V100411_unstim_20121113_n38_01_01.RCC


title: 1174V100411_unstim_20121113_n38_01_02.RCC


title: 1232V071911_LPS_20121012_n37_01_11.RCC


title: 1403V100411_unstim_20121113_n38_01_04.RCC


title: 1009V100411_unstim_20121113_n38_01_03.RCC


title: 1133V071911_LPS_20121012_n37_01_10.RCC


title: 1689V022912_IFNb_20121012_n37_01_07.RCC


title: 0329V101311_unstim_20121113_n39_01_04.RCC


title: 1369V071211_LPS_20121012_n37_01_08.RCC


title: 1021V071911_LPS_20121012_n37_01_09.RCC


title: 0838V022912_IFNb_20121012_n37_01_05.RCC


title: 0109V022912_IFNb_20121012_n37_01_06.RCC


title: 1571V022912_IFNb_20121012_n37_01_04.RCC


title: 1514V101211_unstim_20121113_n38_01_12.RCC


title: 1557V022812_IFNb_20121012_n37_01_03.RCC


title: 1565V022812_IFNb_20121012_n37_01_02.RCC


title: 1698V022812_IFNb_20121012_n37_01_01.RCC


title: 1535V022312_IFNb_20121012_n36_01_12.RCC


title: 1270V022212_IFNb_20121012_n36_01_11.RCC


title: 1107V022212_IFNb_20121012_n36_01_10.RCC


title: 1396V022212_IFNb_20121012_n36_01_08.RCC


title: 1265V022212_IFNb_20121012_n36_01_09.RCC


title: 1435V120111_IFNb_20121012_n36_01_06.RCC


title: 1164V120111_IFNb_20121012_n36_01_07.RCC


title: 1576V113011_IFNb_20121012_n36_01_03.RCC


title: 1592V113011_IFNb_20121012_n36_01_01.RCC


title: 0863V113011_IFNb_20121012_n36_01_02.RCC


title: 1593V120111_IFNb_20121012_n36_01_04.RCC

value: MULTI-RACIAL


title: 1523V113011_IFNb_20121012_n35_01_12.RCC


title: 1578V112911_IFNb_20121012_n35_01_11.RCC


title: 1532V112911_IFNb_20121012_n35_01_10.RCC


title: 0568V112911_IFNb_20121012_n35_01_09.RCC


title: 1574V112911_IFNb_20121012_n35_01_08.RCC


title: 1299V112311_IFNb_20121012_n35_01_06.RCC


title: 1601V112211_IFNb_20121012_n35_01_02.RCC


title: 1570V112211_IFNb_20121012_n35_01_01.RCC


title: 1572V112311_IFNb_20121012_n35_01_07.RCC


title: 1566V112311_IFNb_20121012_n35_01_04.RCC


title: 1252V111711_IFNb_20121012_n34_01_12.RCC


title: 1616V120111_IFNb_20121012_n36_01_05.RCC


title: 1577V111711_IFNb_20121012_n34_01_10.RCC


title: 0064V080311_IFNb_20121012_n34_01_06.RCC


title: 0865V080311_IFNb_20121012_n34_01_07.RCC


title: 1117V072811_IFNb_20121012_n34_01_03.RCC


title: 1099V080211_IFNb_20121012_n34_01_04.RCC


title: 1531V111611_IFNb_20121012_n34_01_08.RCC


title: 0187V080211_IFNb_20121012_n34_01_05.RCC


title: 0469V072811_IFNb_20121012_n34_01_02.RCC


title: 0621V072711_IFNb_20121011_n33_01_12.RCC


title: 1569V112311_IFNb_20121012_n35_01_05.RCC


title: 1384V072111_IFNb_20121011_n33_01_10.RCC


title: 0684V072611_IFNb_20121011_n33_01_11.RCC


title: 0380V072711_IFNb_20121012_n34_01_01.RCC


title: 1539V112211_IFNb_20121012_n35_01_03.RCC


title: 1232V071911_IFNb_20121011_n33_01_05.RCC


title: 1385V072011_IFNb_20121011_n33_01_08.RCC


title: 0780V111611_IFNb_20121012_n34_01_09.RCC


title: 1021V071911_IFNb_20121011_n33_01_03.RCC


title: 1388V071911_IFNb_20121011_n33_01_07.RCC


title: 1689V022912_dNS1_20121011_n32_01_11.RCC


title: 0797V071411_IFNb_20121011_n33_01_02.RCC


title: 1365V071211_IFNb_20121011_n32_01_12.RCC


title: 1369V071211_IFNb_20121011_n33_01_01.RCC


title: 0109V022912_dNS1_20121011_n32_01_10.RCC


title: 1557V022812_dNS1_20121011_n32_01_07.RCC


title: 1571V022912_dNS1_20121011_n32_01_08.RCC


title: 1565V022812_dNS1_20121011_n32_01_06.RCC


title: 0559V072011_IFNb_20121011_n33_01_09.RCC


title: 1698V022812_dNS1_20121011_n32_01_05.RCC


title: 1389V071911_IFNb_20121011_n33_01_06.RCC


title: 1396V022212_dNS1_20121011_n31_01_12.RCC


title: 1265V022212_dNS1_20121011_n32_01_01.RCC


title: 1164V120111_dNS1_20121011_n31_01_11.RCC


title: 1255V111711_IFNb_20121012_n34_01_11.RCC


title: 1576V113011_dNS1_20121011_n31_01_07.RCC


title: 1133V071911_IFNb_20121011_n33_01_04.RCC


title: 1270V022212_dNS1_20121011_n32_01_03.RCC


title: 1535V022312_dNS1_20121011_n32_01_04.RCC


title: 1616V120111_dNS1_20121011_n31_01_09.RCC


title: 1593V120111_dNS1_20121011_n31_01_08.RCC


title: 0863V113011_dNS1_20121011_n31_01_06.RCC


title: 1435V120111_dNS1_20121011_n31_01_10.RCC


title: 0838V022912_dNS1_20121011_n32_01_09.RCC


title: 1523V113011_dNS1_20121011_n31_01_04.RCC


title: 1578V112911_dNS1_20121011_n31_01_03.RCC


title: 1592V113011_dNS1_20121011_n31_01_05.RCC


title: 1556V112311_dNS1_20121010_n30_01_11.RCC


title: 0568V112911_dNS1_20121011_n31_01_01.RCC


title: 1532V112911_dNS1_20121011_n31_01_02.RCC


title: 1572V112311_dNS1_20121010_n30_01_10.RCC


title: 1107V022212_dNS1_20121011_n32_01_02.RCC


title: 1569V112311_dNS1_20121010_n30_01_08.RCC


title: 1574V112911_dNS1_20121010_n30_01_12.RCC


title: 1539V112211_dNS1_20121010_n30_01_06.RCC


title: 1601V112211_dNS1_20121010_n30_01_05.RCC


title: 0839V112211_dNS1_20121010_n30_01_04.RCC


title: 1566V112311_dNS1_20121010_n30_01_07.RCC


title: 1255V111711_dNS1_20121010_n29_01_12.RCC


title: 1252V111711_dNS1_20121010_n30_01_01.RCC


title: 1570V112211_dNS1_20121010_n30_01_03.RCC


title: 0780V111611_dNS1_20121010_n29_01_10.RCC


title: 1299V112311_dNS1_20121010_n30_01_09.RCC


title: 1531V111611_dNS1_20121010_n29_01_09.RCC


title: 1099V080211_dNS1_20121010_n29_01_04.RCC


title: 0469V072811_dNS1_20121010_n29_01_02.RCC


title: 1117V072811_dNS1_20121010_n29_01_03.RCC


title: 0865V080311_dNS1_20121010_n29_01_08.RCC


title: 1433V080211_dNS1_20121010_n29_01_06.RCC


title: 0187V080211_dNS1_20121010_n29_01_05.RCC


title: 1577V111711_dNS1_20121010_n29_01_11.RCC


title: 1586V112211_dNS1_20121010_n30_01_02.RCC


title: 1384V072111_dNS1_20121010_n28_01_09.RCC


title: 1385V072011_dNS1_20121010_n28_01_07.RCC


title: 1135V072711_dNS1_20121010_n28_01_12.RCC


title: 0380V072711_dNS1_20121010_n29_01_01.RCC


title: 0621V072711_dNS1_20121010_n28_01_11.RCC


title: 1388V071911_dNS1_20121010_n28_01_06.RCC


title: 0064V080311_dNS1_20121010_n29_01_07.RCC


title: 1389V071911_dNS1_20121010_n28_01_05.RCC


title: 1374V071411_dNS1_20121009_n27_01_11.RCC


title: 1133V071911_dNS1_20121010_n28_01_03.RCC


title: 1021V071911_dNS1_20121010_n28_01_02.RCC


title: 0797V071411_dNS1_20121010_n28_01_01.RCC


title: 0792V071411_dNS1_20121009_n27_01_12.RCC


title: 0684V072611_dNS1_20121010_n28_01_10.RCC


title: 1369V071211_dNS1_20121009_n27_01_08.RCC


title: 0559V072011_dNS1_20121010_n28_01_08.RCC


title: 1375V071211_dNS1_20121009_n27_01_07.RCC


title: 0256V071211_dNS1_20121009_n27_01_09.RCC


title: 1689V022912_LPS_20121009_n27_01_04.RCC


title: 1405V071211_dNS1_20121009_n27_01_05.RCC


title: 0109V022912_LPS_20121009_n27_01_03.RCC


title: 1571V022912_LPS_20121009_n27_01_01.RCC


title: 1107V022212_LPS_20121009_n26_01_06.RCC


title: 0838V022912_LPS_20121009_n27_01_02.RCC


title: 1698V022812_LPS_20121009_n26_01_10.RCC


title: 1270V022212_LPS_20121009_n26_01_07.RCC


title: 1232V071911_dNS1_20121010_n28_01_04.RCC


title: 1616V120111_LPS_20121009_n26_01_01.RCC


title: 1565V022812_LPS_20121009_n26_01_11.RCC


title: 1435V120111_LPS_20121009_n26_01_02.RCC


title: 1263V071311_dNS1_20121009_n27_01_10.RCC


title: 1164V120111_LPS_20121009_n26_01_03.RCC


title: 1396V022212_LPS_20121009_n26_01_04.RCC


title: 1265V022212_LPS_20121009_n26_01_05.RCC


title: 0863V113011_LPS_20121009_n25_01_10.RCC


title: 1593V120111_LPS_20121009_n25_01_12.RCC


title: 1576V113011_LPS_20121009_n25_01_11.RCC


title: 1523V113011_LPS_20121009_n25_01_08.RCC


title: 1557V022812_LPS_20121009_n26_01_12.RCC


title: 1578V112911_LPS_20121009_n25_01_07.RCC


title: 1574V112911_LPS_20121009_n25_01_04.RCC


title: 0568V112911_LPS_20121009_n25_01_05.RCC


title: 1535V022312_LPS_20121009_n26_01_08.RCC


title: 1299V112311_LPS_20121009_n25_01_01.RCC


title: 1572V112311_LPS_20121009_n25_01_02.RCC


title: 0576V112311_LPS_20121009_n24_01_10.RCC


title: 1539V112211_LPS_20121009_n24_01_08.RCC


title: 1600V112311_LPS_20121009_n24_01_11.RCC


title: 1566V112311_LPS_20121009_n24_01_09.RCC


title: 1569V112311_LPS_20121009_n24_01_12.RCC


title: 0839V112211_LPS_20121009_n24_01_06.RCC


title: 1339V022312_LPS_20121009_n26_01_09.RCC


title: 1586V112211_LPS_20121009_n24_01_04.RCC


title: 1570V112211_LPS_20121009_n24_01_05.RCC


title: 1255V111711_LPS_20121009_n24_01_02.RCC


title: 1252V111711_LPS_20121009_n24_01_03.RCC


title: 1556V112311_LPS_20121009_n25_01_03.RCC


title: 0780V111611_LPS_20121009_n23_01_12.RCC


title: 1592V113011_LPS_20121009_n25_01_09.RCC


title: 1531V111611_LPS_20121009_n23_01_11.RCC


title: 1365V071211_dNS1_20121009_n27_01_06.RCC


title: 1532V112911_LPS_20121009_n25_01_06.RCC


title: 1433V080211_LPS_20121009_n23_01_08.RCC


title: 0865V080311_LPS_20121009_n23_01_10.RCC


title: 1099V080211_LPS_20121009_n23_01_06.RCC


title: 0064V080311_LPS_20121009_n23_01_09.RCC


title: 0469V072811_LPS_20121009_n23_01_03.RCC


title: 0187V080211_LPS_20121009_n23_01_07.RCC


title: 0154V080211_LPS_20121009_n23_01_05.RCC


title: 1117V072811_LPS_20121009_n23_01_04.RCC


title: 0380V072711_LPS_20121009_n23_01_02.RCC


title: 1577V111711_LPS_20121009_n24_01_01.RCC


title: 0684V072611_LPS_20121009_n22_01_10.RCC


title: 1135V072711_LPS_20121009_n23_01_01.RCC


title: 1137V072611_LPS_20121009_n22_01_11.RCC


title: 0621V072711_LPS_20121009_n22_01_12.RCC


title: 0910V072611_LPS_20121009_n22_01_09.RCC


title: 0559V072011_LPS_20121009_n22_01_06.RCC


title: 1112V072011_LPS_20121009_n22_01_05.RCC


title: 1385V072011_LPS_20121009_n22_01_04.RCC


title: 1021V071911_LPS_20121009_n21_01_11.RCC


title: 1389V071911_LPS_20121009_n22_01_02.RCC


title: 1388V071911_LPS_20121009_n22_01_03.RCC


title: 1412V072611_LPS_20121009_n22_01_08.RCC


title: 1374V071411_LPS_20121009_n21_01_08.RCC


title: 0792V071411_LPS_20121009_n21_01_09.RCC


title: 0797V071411_LPS_20121009_n21_01_10.RCC


title: 0256V071211_LPS_20121009_n21_01_06.RCC


title: 1369V071211_LPS_20121009_n21_01_05.RCC


title: 1384V072111_LPS_20121009_n22_01_07.RCC


title: 1375V071211_LPS_20121009_n21_01_04.RCC


title: 1405V071211_LPS_20121009_n21_01_02.RCC


title: 1365V071211_LPS_20121009_n21_01_03.RCC


title: 1689V022912_unstim_20121009_n21_01_01.RCC


title: 0109V022912_unstim_20121005_n20_01_12.RCC


title: 1571V022912_unstim_20121005_n20_01_10.RCC


title: 1565V022812_unstim_20121005_n20_01_08.RCC


title: 0838V022912_unstim_20121005_n20_01_11.RCC


title: 1557V022812_unstim_20121005_n20_01_09.RCC


title: 1232V071911_LPS_20121009_n22_01_01.RCC


title: 1339V022312_unstim_20121005_n20_01_06.RCC


title: 1698V022812_unstim_20121005_n20_01_07.RCC


title: 1263V071311_LPS_20121009_n21_01_07.RCC


title: 1265V022212_unstim_20121005_n20_01_02.RCC


title: 1435V120111_unstim_20121005_n19_01_10.RCC


title: 1164V120111_unstim_20121005_n19_01_11.RCC


title: 1396V022212_unstim_20121005_n19_01_12.RCC


title: 1107V022212_unstim_20121005_n20_01_03.RCC


title: 1593V120111_unstim_20121005_n19_01_08.RCC


title: 1270V022212_unstim_20121005_n20_01_04.RCC


title: 1616V120111_unstim_20121005_n19_01_09.RCC


title: 0863V113011_unstim_20121005_n19_01_06.RCC


title: 1576V113011_unstim_20121005_n19_01_07.RCC


title: 1592V113011_unstim_20121005_n19_01_05.RCC


title: 1523V113011_unstim_20121005_n19_01_04.RCC


title: 1532V112911_unstim_20121005_n19_01_02.RCC


title: 1578V112911_unstim_20121005_n19_01_03.RCC


title: 0568V112911_unstim_20121005_n19_01_01.RCC


title: 1535V022312_unstim_20121005_n20_01_05.RCC


title: 1133V071911_LPS_20121009_n21_01_12.RCC


title: 1572V112311_unstim_20121005_n18_01_10.RCC


title: 1556V112311_unstim_20121005_n18_01_11.RCC


title: 1574V112911_unstim_20121005_n18_01_12.RCC


title: 1397V022212_unstim_20121005_n20_01_01.RCC


title: 1600V112311_unstim_20121005_n18_01_07.RCC


title: 1569V112311_unstim_20121005_n18_01_08.RCC


title: 1566V112311_unstim_20121005_n18_01_05.RCC


title: 0576V112311_unstim_20121005_n18_01_06.RCC


title: 1299V112311_unstim_20121005_n18_01_09.RCC


title: 1550V112211_unstim_20121005_n18_01_02.RCC


title: 0839V112211_unstim_20121005_n18_01_01.RCC


title: 1586V112211_unstim_20121005_n17_01_11.RCC


title: 1577V111711_unstim_20121005_n17_01_08.RCC


title: 1255V111711_unstim_20121005_n17_01_09.RCC


title: 0780V111611_unstim_20121005_n17_01_07.RCC


title: 0064V080311_unstim_20121005_n17_01_04.RCC


title: 1252V111711_unstim_20121005_n17_01_10.RCC


title: 1570V112211_unstim_20121005_n17_01_12.RCC


title: 0865V080311_unstim_20121005_n17_01_05.RCC


title: 1433V080211_unstim_20121005_n17_01_01.RCC


title: 1159V080211_unstim_20121005_n17_01_02.RCC


title: 1531V111611_unstim_20121005_n17_01_06.RCC


title: 1099V080211_unstim_20121005_n16_01_11.RCC


title: 0187V080211_unstim_20121005_n16_01_12.RCC


title: 1601V112211_unstim_20121005_n18_01_03.RCC


title: 0154V080211_unstim_20121005_n16_01_10.RCC


title: 0380V072711_unstim_20121005_n16_01_07.RCC


title: 1539V112211_unstim_20121005_n18_01_04.RCC


title: 0469V072811_unstim_20121005_n16_01_08.RCC


title: 0070V080311_unstim_20121005_n17_01_03.RCC


title: 1135V072711_unstim_20121005_n16_01_06.RCC


title: 1412V072611_unstim_20121005_n15_01_12.RCC


title: 1137V072611_unstim_20121005_n16_01_04.RCC


title: 0910V072611_unstim_20121005_n16_01_01.RCC


title: 0337V072611_unstim_20121005_n16_01_03.RCC


title: 0621V072711_unstim_20121005_n16_01_05.RCC


title: 1384V072111_unstim_20121005_n15_01_11.RCC


title: 0559V072011_unstim_20121005_n15_01_10.RCC


title: 0684V072611_unstim_20121005_n16_01_02.RCC


title: 1232V071911_unstim_20121005_n15_01_04.RCC


title: 1389V071911_unstim_20121005_n15_01_05.RCC


title: 1386V072011_unstim_20121005_n15_01_08.RCC


title: 1112V072011_unstim_20121005_n15_01_09.RCC


title: 1385V072011_unstim_20121005_n15_01_07.RCC


title: 1021V071911_unstim_20121005_n15_01_02.RCC


title: 1133V071911_unstim_20121005_n15_01_03.RCC


title: 1117V072811_unstim_20121005_n16_01_09.RCC


title: 0797V071411_unstim_20121005_n15_01_01.RCC


title: 1216V071411_unstim_20121005_n14_01_12.RCC


title: 0792V071411_unstim_20121005_n14_01_11.RCC


title: 1388V071911_unstim_20121005_n15_01_06.RCC


title: 1263V071311_unstim_20121005_n14_01_09.RCC


title: 1056V071311_unstim_20121005_n14_01_08.RCC


title: 1369V071211_unstim_20121005_n14_01_06.RCC


title: 0256V071211_unstim_20121005_n14_01_07.RCC


title: 1374V071411_unstim_20121005_n14_01_10.RCC


title: 1375V071211_unstim_20121005_n14_01_05.RCC


title: 1601V112211_LPS_20121009_n24_01_07.RCC


title: 1365V071211_unstim_20121005_n14_01_04.RCC


title: 1405V071211_unstim_20121005_n14_01_03.RCC


title: 1308V011912_IFNb_20121005_n14_01_02.RCC


title: 0119V052510_IFNb_20121005_n14_01_01.RCC


title: 0119V052510_dNS1_20121003_n9_01_09.RCC


title: 1020V060110_dNS1_20121003_n9_01_11.RCC


title: 1521V011112_dNS1_20121003_n9_01_12.RCC


title: 0010V052510_dNS1_20121003_n9_01_08.RCC


title: 0274V052610_dNS1_20121003_n9_01_07.RCC


title: 1202V051711_dNS1_20121003_n9_01_06.RCC


title: 0490V051211_dNS1_20121003_n9_01_03.RCC


title: 1273V051211_dNS1_20121003_n9_01_05.RCC


title: 1227V051211_dNS1_20121003_n9_01_04.RCC


title: 1245V051111_dNS1_20121003_n9_01_02.RCC


title: 1164V042711_dNS1_20121003_n8_01_09.RCC


title: 0920V042111_dNS1_20121003_n8_01_08.RCC


title: 1639V011812_LPS_20121003_n8_01_03.RCC


title: 1312V011812_LPS_20121003_n8_01_02.RCC


title: 0619V011812_LPS_20121003_n8_01_04.RCC


title: 1626V011912_IFNb_20121003_n13_01_12.RCC


title: 1673V011812_LPS_20121003_n8_01_05.RCC


title: 0885V060110_dNS1_20121003_n9_01_10.RCC


title: 1626V011912_LPS_20121003_n8_01_06.RCC


title: 1673V011812_IFNb_20121003_n13_01_11.RCC


title: 1226V042811_dNS1_20121003_n8_01_10.RCC


title: 1466V011812_LPS_20121003_n8_01_01.RCC


title: 1249V050311_dNS1_20121003_n8_01_11.RCC


title: 0398V050311_dNS1_20121003_n9_01_01.RCC


title: 1308V011912_LPS_20121003_n8_01_07.RCC


title: 0619V011812_IFNb_20121003_n13_01_10.RCC


title: 1639V011812_IFNb_20121003_n13_01_09.RCC


title: 1232V050311_dNS1_20121003_n8_01_12.RCC


title: 1466V011812_IFNb_20121003_n13_01_07.RCC


title: 1656V011712_IFNb_20121003_n13_01_04.RCC


title: 0665V011812_IFNb_20121003_n13_01_05.RCC


title: 1674V011812_IFNb_20121003_n13_01_06.RCC


title: 1671V011712_IFNb_20121003_n13_01_03.RCC


title: 1587V011712_IFNb_20121003_n13_01_02.RCC


title: 0230V011712_IFNb_20121003_n12_01_12.RCC


title: 1608V011712_IFNb_20121003_n13_01_01.RCC


title: 1653V011212_IFNb_20121003_n12_01_10.RCC


title: 1662V011712_IFNb_20121003_n12_01_11.RCC


title: 1553V011212_IFNb_20121003_n12_01_09.RCC


title: 1521V011112_IFNb_20121003_n12_01_08.RCC


title: 1232V050311_IFNb_20121003_n11_01_11.RCC


title: 1249V050311_IFNb_20121003_n11_01_10.RCC


title: 0398V050311_IFNb_20121003_n11_01_12.RCC


title: 1226V042811_IFNb_20121003_n11_01_09.RCC


title: 0010V052510_IFNb_20121003_n12_01_06.RCC


title: 1202V051711_IFNb_20121003_n12_01_05.RCC


title: 1227V051211_IFNb_20121003_n12_01_03.RCC


title: 1245V051111_IFNb_20121003_n12_01_01.RCC


title: 1273V051211_IFNb_20121003_n12_01_04.RCC


title: 0619V011812_dNS1_20121003_n11_01_03.RCC


title: 1164V042711_IFNb_20121003_n11_01_08.RCC


title: 1312V011812_IFNb_20121003_n13_01_08.RCC


title: 1673V011812_dNS1_20121003_n11_01_04.RCC


title: 1626V011912_dNS1_20121003_n11_01_05.RCC


title: 0490V051211_IFNb_20121003_n12_01_02.RCC


title: 1308V011912_dNS1_20121003_n11_01_06.RCC


title: 1656V011712_dNS1_20121003_n10_01_09.RCC


title: 0665V011812_dNS1_20121003_n10_01_10.RCC


title: 1674V011812_dNS1_20121003_n10_01_11.RCC


title: 1639V011812_dNS1_20121003_n11_01_02.RCC


title: 1671V011712_dNS1_20121003_n10_01_08.RCC


title: 0119V052510_IFNb_20121003_n12_01_07.RCC


title: 1466V011812_dNS1_20121003_n10_01_12.RCC


title: 1312V011812_dNS1_20121003_n11_01_01.RCC


title: 1608V011712_dNS1_20121003_n10_01_06.RCC


title: 0920V042111_IFNb_20121003_n11_01_07.RCC


title: 1662V011712_dNS1_20121003_n10_01_04.RCC


title: 1587V011712_dNS1_20121003_n10_01_07.RCC


title: 1653V011212_dNS1_20121003_n10_01_03.RCC


title: 1553V011212_dNS1_20121003_n10_01_02.RCC


title: 0665V011812_LPS_20121002_n7_01_11.RCC


title: 1674V011812_LPS_20121002_n7_01_12.RCC


title: 0195V011212_dNS1_20121003_n10_01_01.RCC


title: 0230V011712_LPS_20121002_n7_01_06.RCC


title: 1671V011712_LPS_20121002_n7_01_09.RCC


title: 1521V011112_LPS_20121002_n7_01_01.RCC


title: 1553V011212_LPS_20121002_n7_01_03.RCC


title: 0195V011212_LPS_20121002_n7_01_02.RCC


title: 1653V011212_LPS_20121002_n7_01_04.RCC


title: 1662V011712_LPS_20121002_n7_01_05.RCC


title: 1608V011712_LPS_20121002_n7_01_07.RCC


title: 0230V011712_dNS1_20121003_n10_01_05.RCC


title: 1587V011712_LPS_20121002_n7_01_08.RCC


title: 0274V052610_LPS_20121002_n6_01_06.RCC


title: 0119V052510_LPS_20121002_n6_01_09.RCC


title: 0010V052510_LPS_20121002_n6_01_08.RCC


title: 0003V052610_LPS_20121002_n6_01_07.RCC


title: 0885V060110_LPS_20121002_n6_01_10.RCC


title: 0406V052610_LPS_20121002_n6_01_05.RCC


title: 1211V051211_LPS_20121002_n6_01_01.RCC


title: 1656V011712_LPS_20121002_n7_01_10.RCC


title: 1202V051711_LPS_20121002_n6_01_04.RCC


title: 1243V051011_LPS_20121002_n5_01_11.RCC


title: 0490V051211_LPS_20121002_n5_01_12.RCC


title: 1245V051111_LPS_20121002_n5_01_10.RCC


title: 1020V060110_LPS_20121002_n6_01_11.RCC


title: 1232V050311_LPS_20121002_n5_01_08.RCC


title: 1649V011112_LPS_20121002_n6_01_12.RCC


title: 1226V042811_LPS_20121002_n5_01_06.RCC


title: 1273V051211_LPS_20121002_n6_01_03.RCC


title: 1227V051211_LPS_20121002_n6_01_02.RCC


title: 0920V042111_LPS_20121002_n5_01_03.RCC


title: 1639V011812_unstim_20121002_n4_01_10.RCC


title: 1308V011912_unstim_20121002_n5_01_02.RCC


title: 1466V011812_unstim_20121002_n4_01_08.RCC


title: 0619V011812_unstim_20121002_n4_01_11.RCC


title: 1626V011912_unstim_20121002_n5_01_01.RCC


title: 1189V042611_LPS_20121002_n5_01_04.RCC


title: 1164V042711_LPS_20121002_n5_01_05.RCC


title: 1671V011712_unstim_20121002_n4_01_04.RCC


title: 1656V011712_unstim_20121002_n4_01_05.RCC


title: 0665V011812_unstim_20121002_n4_01_06.RCC


title: 1312V011812_unstim_20121002_n4_01_09.RCC


title: 1674V011812_unstim_20121002_n4_01_07.RCC


title: 0398V050311_LPS_20121002_n5_01_09.RCC


title: 1249V050311_LPS_20121002_n5_01_07.RCC


title: 1553V011212_unstim_20121002_n3_01_10.RCC


title: 0230V011712_unstim_20121002_n4_01_01.RCC


title: 1653V011212_unstim_20121002_n3_01_11.RCC


title: 1662V011712_unstim_20121002_n3_01_12.RCC


title: 1608V011712_unstim_20121002_n4_01_02.RCC


title: 0885V060110_unstim_20121002_n3_01_05.RCC


title: 0195V011212_unstim_20121002_n3_01_09.RCC


title: 1521V011112_unstim_20121002_n3_01_08.RCC


title: 1649V011112_unstim_20121002_n3_01_07.RCC


title: 0119V052510_unstim_20121002_n3_01_04.RCC


title: 1673V011812_unstim_20121002_n4_01_12.RCC


title: 0616V052510_unstim_20121002_n3_01_02.RCC


title: 0274V052610_unstim_20121002_n2_01_12.RCC


title: 0010V052510_unstim_20121002_n3_01_03.RCC


title: 0406V052610_unstim_20121002_n2_01_11.RCC


title: 0425V052610_unstim_20121002_n2_01_10.RCC


title: 1273V051211_unstim_20121002_n2_01_07.RCC


title: 0772V052610_unstim_20121002_n2_01_09.RCC


title: 1202V051711_unstim_20121002_n2_01_08.RCC


title: 1206V051011_unstim_20121002_n2_01_02.RCC


title: 1243V051011_unstim_20121002_n2_01_03.RCC


title: 1587V011712_unstim_20121002_n4_01_03.RCC


title: 1227V051211_unstim_20121002_n2_01_06.RCC


title: 0490V051211_unstim_20121002_n2_01_04.RCC


title: 1211V051211_unstim_20121002_n2_01_05.RCC


title: 1020V060110_unstim_20121002_n3_01_06.RCC


title: 1232V050311_unstim_20121002_n1_01_09.RCC


title: 0712V050311_unstim_20121002_n1_01_10.RCC


title: 0003V052610_unstim_20121002_n3_01_01.RCC


title: 1226V042811_unstim_20121002_n1_01_07.RCC


title: 1249V050311_unstim_20121002_n1_01_08.RCC


title: 0398V050311_unstim_20121002_n1_01_11.RCC


title: 1212V051111_unstim_20121002_n1_01_12.RCC


title: 0884V042811_unstim_20121002_n1_01_06.RCC


title: 1252V042711_unstim_20121002_n1_01_05.RCC


title: 1189V042611_unstim_20121002_n1_01_02.RCC


title: 1245V051111_unstim_20121002_n2_01_01.RCC


title: 0920V042111_unstim_20121002_n1_01_01.RCC


title: 0793V060911_unstim_20090112_n99_01_10.RCC


title: 1088V060911_unstim_20090112_n99_01_12.RCC


title: 1279V060911_unstim_20090112_n99_01_09.RCC


title: 1336V060911_unstim_20090112_n99_01_11.RCC


title: 0794V060811_unstim_20090112_n99_01_07.RCC


title: 1331V012412_LPS_20090112_n99_01_05.RCC


title: 1275V060811_unstim_20090112_n99_01_06.RCC


title: 1164V042711_unstim_20121002_n1_01_04.RCC


title: 0744V012412_LPS_20090112_n99_01_03.RCC


title: 1026V022112_LPS_20090112_n98_01_09.RCC


title: 1672V012412_LPS_20090112_n99_01_04.RCC


title: 1647V012412_LPS_20090112_n98_01_12.RCC


title: 1686V022212_LPS_20090112_n98_01_11.RCC


title: 0111V042611_unstim_20121002_n1_01_03.RCC


title: 1278V060811_unstim_20090112_n99_01_08.RCC


title: 1646V012412_LPS_20090112_n99_01_01.RCC


title: 1625V022112_LPS_20090112_n98_01_07.RCC


title: 1416V021612_LPS_20090112_n98_01_06.RCC


title: 0308V012412_LPS_20090112_n99_01_02.RCC


title: 1237V021512_LPS_20090112_n98_01_04.RCC


title: 1342V021612_LPS_20090112_n98_01_05.RCC


title: 1687V021512_LPS_20090112_n98_01_02.RCC


title: 1627V021412_LPS_20090112_n98_01_01.RCC


title: 1688V021512_LPS_20090112_n98_01_03.RCC


title: 1654V022112_LPS_20090112_n98_01_08.RCC


title: 1498V102011_LPS_20121217_n204_01_12.RCC


title: 0195V011212_dNS1_20121217_n205_01_01.RCC


title: 1030V071410_unstim_20121217_n204_01_09.RCC


title: 0195V011212_LPS_20121217_n204_01_11.RCC


title: 1649V011112_LPS_20121217_n204_01_10.RCC


title: 0752V022112_LPS_20090112_n98_01_10.RCC


title: 1578V112911_dNS1_20121217_n205_01_02.RCC


title: 1540V020812_LPS_20121217_n205_01_05.RCC


title: 1589V020812_LPS_20121217_n205_01_04.RCC


title: 1557V022812_IFNb_20121217_n205_01_03.RCC


title: 0659V071310_unstim_20121217_n204_01_07.RCC


title: 0984V062910_unstim_20121217_n204_01_06.RCC


title: 0997V060810_unstim_20121217_n204_01_02.RCC


title: 0510V060810_unstim_20121217_n204_01_01.RCC


title: 1030V060210_unstim_20121217_n203_01_11.RCC


title: 0816V060910_unstim_20121217_n203_01_12.RCC


title: 0979V120910_unstim_20121217_n204_01_03.RCC


title: 0151V070610_unstim_20121217_n204_01_05.RCC


title: 0092V051110_unstim_20121217_n203_01_09.RCC


title: 1191V041911_IFNb_20121217_n203_01_08.RCC


title: 0104V051110_unstim_20121217_n203_01_10.RCC


title: 0136V033111_IFNb_20121217_n203_01_07.RCC


title: 0019V031611_IFNb_20121217_n203_01_05.RCC


title: 0917V031711_IFNb_20121217_n203_01_04.RCC


title: 1111V031511_IFNb_20121217_n203_01_03.RCC


title: 0373V021711_IFNb_20121217_n203_01_02.RCC


title: 0581V030111_IFNb_20121217_n203_01_01.RCC


title: 0804V071310_unstim_20121217_n204_01_08.RCC


title: 1114V042011_LPS_20121216_n202_01_08.RCC


title: 1165V041211_dNS1_20121216_n202_01_09.RCC


title: 0441V022211_IFNb_20121216_n202_01_10.RCC


title: 1203V042011_LPS_20121216_n202_01_07.RCC


title: 0899V030811_IFNb_20121216_n202_01_12.RCC


title: 1197V041211_LPS_20121216_n202_01_04.RCC


title: 1157V041311_LPS_20121216_n202_01_05.RCC


title: 1191V041911_LPS_20121216_n202_01_06.RCC


title: 0412V021511_LPS_20121216_n202_01_02.RCC


title: 0836V030311_IFNb_20121216_n202_01_11.RCC


title: 0986V070610_unstim_20121217_n204_01_04.RCC


title: 0536V021711_LPS_20121216_n202_01_03.RCC


title: 1140V033011_IFNb_20121217_n203_01_06.RCC


title: 1217V080411_unstim_20121216_n201_01_12.RCC


title: 1217V080411_dNS1_20121216_n202_01_01.RCC


title: 1355V060711_unstim_20121216_n201_01_11.RCC


title: 1228V051711_unstim_20121216_n201_01_09.RCC


title: 1307V051911_unstim_20121216_n201_01_10.RCC


title: 0430V092211_LPS_20121216_n201_01_07.RCC


title: 1528V012512_IFNb_20121216_n201_01_04.RCC


title: 1219V051711_unstim_20121216_n201_01_08.RCC


title: 1328V091511_LPS_20121216_n201_01_05.RCC


title: 1057V100411_IFNb_20121216_n201_01_02.RCC


title: 1446V062811_IFNb_20121216_n200_01_10.RCC


title: 1417V092911_IFNb_20121216_n200_01_12.RCC


title: 1442V100411_IFNb_20121216_n201_01_01.RCC


title: 1483V092811_IFNb_20121216_n200_01_11.RCC


title: 1344V062811_IFNb_20121216_n200_01_09.RCC


title: 1156V061511_LPS_20121216_n200_01_08.RCC


title: 1459V092011_LPS_20121216_n201_01_06.RCC


title: 1528V012512_dNS1_20121216_n200_01_03.RCC


title: 1479V092911_dNS1_20121216_n199_01_11.RCC


title: 1275V060811_IFNb_20121216_n200_01_05.RCC


title: 1057V100411_dNS1_20121216_n200_01_01.RCC


title: 1667V012512_dNS1_20121216_n200_01_02.RCC


title: 0412V092911_dNS1_20121216_n199_01_10.RCC


title: 1279V060911_LPS_20121216_n200_01_06.RCC


title: 1458V092711_dNS1_20121216_n199_01_09.RCC


title: 1475V013112_dNS1_20121216_n200_01_04.RCC


title: 0793V060911_LPS_20121216_n200_01_07.RCC


title: 1667V012512_IFNb_20121216_n201_01_03.RCC


title: 0182V092011_dNS1_20121216_n199_01_07.RCC


title: 0430V092211_dNS1_20121216_n199_01_08.RCC


title: 1459V092011_dNS1_20121216_n199_01_06.RCC


title: 1262V090811_dNS1_20121216_n199_01_02.RCC


title: 1142V092111_dNS1_20121216_n199_01_04.RCC


title: 1439V092111_dNS1_20121216_n199_01_03.RCC


title: 1391V091511_unstim_20121216_n199_01_01.RCC


title: 0570V062211_unstim_20121215_n198_01_12.RCC


title: 0688V062211_unstim_20121215_n198_01_11.RCC


title: 1417V092911_dNS1_20121216_n199_01_12.RCC


title: 1156V061511_unstim_20121215_n198_01_10.RCC


title: 1112V110911_LPS_20121215_n198_01_06.RCC


title: 1646V012412_LPS_20121215_n198_01_08.RCC


title: 0794V060811_unstim_20121215_n198_01_09.RCC


title: 0481V110811_LPS_20121215_n198_01_05.RCC


title: 0719V110211_LPS_20121215_n198_01_04.RCC


title: 1423V092211_dNS1_20121216_n199_01_05.RCC


title: 0266V110211_LPS_20121215_n198_01_03.RCC


title: 0916V111011_LPS_20121215_n198_01_07.RCC


title: 1331V012412_IFNb_20121215_n198_01_01.RCC


title: 1686V022212_IFNb_20121215_n197_01_12.RCC


title: 1542V102611_LPS_20121215_n197_01_09.RCC


title: 1242V110311_LPS_20121215_n196_01_12.RCC


title: 1625V022112_LPS_20121215_n197_01_05.RCC


title: 1654V022112_LPS_20121215_n197_01_06.RCC


title: 1540V020812_LPS_20121215_n197_01_04.RCC


title: 1349V020712_LPS_20121215_n197_01_02.RCC


title: 0980V111611_unstim_20121215_n196_01_11.RCC


title: 1559V111511_unstim_20121215_n196_01_10.RCC


title: 1557V022812_IFNb_20121215_n196_01_06.RCC


title: 1616V120111_IFNb_20121215_n196_01_05.RCC


title: 1360V102011_dNS1_20121215_n196_01_07.RCC


title: 1389V071911_IFNb_20121215_n196_01_04.RCC


title: 1026V022112_dNS1_20121215_n197_01_08.RCC


title: 1232V071911_IFNb_20121215_n196_01_03.RCC


title: 1589V020812_LPS_20121215_n197_01_03.RCC


title: 1270V022212_dNS1_20121215_n195_01_12.RCC


title: 1535V022312_dNS1_20121215_n196_01_01.RCC


title: 1131V102711_LPS_20121215_n198_01_02.RCC


title: 1687V021512_IFNb_20121215_n197_01_11.RCC


title: 1416V021612_LPS_20121215_n197_01_10.RCC


title: 1523V113011_dNS1_20121215_n195_01_10.RCC


title: 1214V101211_IFNb_20121215_n196_01_08.RCC


title: 1299V112311_unstim_20121215_n195_01_03.RCC


title: 1532V112911_dNS1_20121215_n195_01_08.RCC


title: 1578V112911_unstim_20121215_n195_01_05.RCC


title: 1578V112911_dNS1_20121215_n195_01_09.RCC


title: 1532V112911_unstim_20121215_n195_01_04.RCC


title: 0839V112211_LPS_20121215_n195_01_07.RCC


title: 1523V113011_unstim_20121215_n195_01_06.RCC


title: 1569V112311_unstim_20121215_n195_01_02.RCC


title: 0064V080311_unstim_20121215_n195_01_01.RCC


title: 8A4

city: Wuhan

first: Xiao-Qin

last: Xia

state: Hubei

address: No. 7 Donghu South Road, Wuchang District

department: Center for Molelcular and Cellular Biology of Aquatic Organisms

country: China

institute: Institute of Hydrobiology, the Chinese Academy of Sciences

description:
18BPF = late 3rd instar
PF = white pre-pupae

hyb_protocol: Performed by Roche Nimblegen Service Group in Iceland.

data_processing: The raw mRNA expression data were pre-processed using NimbleGen’s DEVA software suite, which includes background correction, quantile normalization, and summarization of 24 probeset expression using the robust multi-array average  (RMA)  method.  The random probes present on the NimbleGen arrays were removed prior to mRNA data analysis. A linear mixed-effects model was used to test for differences in expression levels between developmental stages per strain.

organism: Drosophila melanogaster

growth_protocol: Flies were grown in standard corn meal medium, constant lighting conditions, and at 25⁰C, larvae were raised under non-crowded conditions in medium with  0.05%  bromophenol blue.

extract_protocol: ~120 mg (60-80 individuals depending on the strain) of frozen flies for each biological replicate were ground using  motorized pestles and the total RNAs extracted and purified with miRVana miRNA isolation kit (Ambion Inc.). Both total RNAs and small RNAs from biological replicates for each strain/sex were isolated and used in all three  expression profiling approaches. Concentration, quality and integrity of the RNA samples were assessed using the NanoDrop 8000 Spectrophotometer and the RNA 6000 Nano and Small RNA kits (Agilent Technologies) in an Agilent 2100 Bioanalyzer. RNA extractions for different strains were performed independently to avoid cross-contamination.

treatment_protocol: Samples were snap frozen in liquid nitrogen and stored at -80⁰C until RNA isolation.

tag: genotype

tag: developmental stage


title: 8C2

scan_protocol: Performed by Roche Nimblegen Service Group in Iceland.

value: PF


title: 1521V011112_dNS1_20121215_n194_01_12.RCC

tag: stimulation

tag: hours


title: 8C4

label_protocol: Performed by Roche Nimblegen Service Group in Iceland.


title: 1626V011912_IFNb_20121215_n194_01_11.RCC

tag: plate

tag: cartridge


title: 8C3


title: 1673V011812_IFNb_20121215_n194_01_10.RCC

tag: lane

tag: date of visit


title: 8A3


title: 6C2

value: Samarkand


title: 1674V011812_IFNb_20121215_n194_01_08.RCC

tag: time of visit

tag: gender


title: 6C1


title: 6A4


title: 0619V011812_IFNb_20121215_n194_01_09.RCC

tag: age (years)

tag: ethnicity


title: 6A3


title: 0490V111011_LPS_20121215_n197_01_01.RCC

tag: million pbmc

tag: million dcs


title: 1501V011112_LPS_20121215_n196_01_09.RCC

tag: height (cm)

tag: weight (kg)


title: 8A1


title: 0230V011712_IFNb_20121215_n194_01_07.RCC

tag: systolic/diastolic

tag: bmi


title: 1671V011712_LPS_20121215_n194_01_02.RCC


title: 1587V011712_LPS_20121215_n194_01_01.RCC


title: 1653V011212_dNS1_20121215_n194_01_04.RCC


title: 0195V011212_dNS1_20121215_n194_01_03.RCC


title: 6C3

tag: genotype

tag: developmental stage


title: 1521V011112_IFNb_20121215_n194_01_06.RCC

tag: stimulation

tag: hours


title: 0119V052510_IFNb_20121215_n194_01_05.RCC

tag: plate

tag: cartridge


title: 4C3

value: Canton-S


title: 4A1


title: 4A4


title: 4C2


title: 4C1


title: 0195V011212_LPS_20121214_n193_01_12.RCC

tag: lane

tag: date of visit


title: 4A3


title: 6A2


title: 1Y5

value: Oregon-R


title: 1649V011112_LPS_20121214_n193_01_11.RCC

tag: time of visit

tag: gender


title: 0274V052610_LPS_20121214_n193_01_10.RCC

tag: age (years)

tag: ethnicity


title: 0406V052610_LPS_20121214_n193_01_09.RCC

tag: million pbmc

tag: million dcs


title: 0665V011812_unstim_20121214_n193_01_08.RCC

tag: height (cm)

tag: weight (kg)


title: 1656V011712_unstim_20121214_n193_01_07.RCC

tag: systolic/diastolic

tag: bmi


title: 0884V042811_unstim_20121214_n193_01_05.RCC


title: 1164V042711_unstim_20121214_n193_01_03.RCC


title: 1587V011712_unstim_20121214_n193_01_06.RCC


title: 1252V042711_unstim_20121214_n193_01_04.RCC


title: 1W2

tag: genotype

tag: developmental stage


title: 0910V021711_unstim_20121214_n192_01_11.RCC

tag: stimulation

tag: hours


title: 0111V042611_unstim_20121214_n193_01_02.RCC

tag: plate

tag: cartridge


title: 0786V031511_unstim_20121214_n192_01_12.RCC

tag: lane

tag: date of visit


title: 0843V021711_unstim_20121214_n192_01_10.RCC

tag: time of visit

tag: gender


title: 1W3


title: 1686V022212_LPS_20121215_n197_01_07.RCC

tag: age (years)

tag: ethnicity


title: 0940V030211_unstim_20121214_n192_01_09.RCC

tag: million pbmc

tag: million dcs


title: 1107V022212_dNS1_20121215_n195_01_11.RCC

tag: height (cm)

tag: weight (kg)


title: Daphnia_copper_96h_bl4_REF

city: Antwerp

first: Nathalie

last: Adam

address: Groenenborgerlaan 171

department: Biology

country: Belgium

institute: University of Antwerp

hyb_protocol: 300 ng of a labeled cy3 or cy5 cRNA sample from the exposure was co-hybridized with a cy5 or cy3 cRNA reference sample on a 15 K Daphnia magna microarray (Agilent-023710, Platform GPL16579), for the different replicates, at 60°C during 17 h in a rotating hybridization oven (Agilent G2545A). The arrays were washed according to the two-color microarray-based gene expression analysis protocol (version 6.5, Agilent Technologies).

scan_protocol: The arrays were scanned with Genepix personal 4100a scanner (Axon Instruments) at 532 (cy3) and 635 (cy5) nm with a resolution of 5 µm and adjusted photomultiplier tube (PMT) values to obtain a ratio cy5/cy3 of around 1 (0.98 < ratio < 1.02).

data_processing: The statistical analysis of the microarray data was performed with the R package limma. Spots for which red or green FG < BG + 2SD on all arrays, were deleted (FG: median foreground intensity, BG: average local background intensity calculated over the full microarray, SD: standard deviation of local background intensities). Subsequently, the remaining data were vsn normalized and background corrected (by subtracting the local background from the foreground for each spot). Linear models were fitted to intensity ratios, after which probes were ranked in order of evidence of differential expression using an empirical Bayes method. The Zn exposures (ZnO nanoparticles and ZnCl2) were contrasted against their controls and against each other. These contrasts were fitted to the linear model and considered significantly differentially expressed genes if false discovery rate (FDR) < 0.1 and |log2FC| > 0.585 (log2 fold change, corresponds to 1.5 fold change). The same analysis was done for the Cu exposures.

label: cy 5

organism: Daphnia magna

source_name: Blank exposure sample; whole Daphnia

label_protocol: The Agilent Low Input Quick Amp Labeling Kit was used to convert the total RNA (100 ng) to amplified labeled cRNA according to the two-color microarray-based gene expression analysis protocol (version 6.5, Agilent Technologies). For each exposure experiment (ZnO, ZnCl2, Blank on the one hand and CuO, CuCl2.2H2O, Blank on the other hand) a reference design with swapped dyes (to avoid dye bias) was used. Two replicates of each exposure condition (metal oxide, salt, blank) were labeled with the fluorescent dye cyanine 3 (cy3) and two other replicates were labeled with the fluorescent dye cyanine 5 (cy5), while the reference sample was labeled with both cy3 and cy5. The labeled cRNA was purified using RNeasy mini spin columns (Qiagen). The quantity (yield) and labeling efficiency (specific activity) of these cRNA samples was checked with Nanodrop, by measuring the RNA concentration (absorbance at 260 nm) and the cy3 (absorbance at 550 nm) and cy5 (absorbance at 650 nm) incorporation.

growth_protocol: Exposed in ISO test medium (CaCl2.2H2O: 0.294 g/l, MgSO4.7H2O: 0.123 g/l, NaHCO3: 0.065 g/l KCl: 0.006 g/l) for 96 hours, fed on algae species Pseudokirchneriella subcapitata and Chlamydomonas reinhardtti (in a 3:1 ratio)

extract_protocol: For each replicate, the RNA of pooled samples (40 daphnids) was extracted using the Trizol RNA extraction method (Invitrogen), followed by a DNAse treatment (Fermentas) and phenol/chloroform extractions.

treatment_protocol: 96 hours of exposure to EC10 (immobilization) concentrations of nanoparticles, salts or not exposed (blank); medium refreshment and exposure to fresh spike of nanoparticles/salt after 48 hours

tag: age when sampled

value: 96 hours

tag: tissue

value: whole body extracts

label: cy 3

source_name: Copper reference sample; whole Daphnia


title: 1123V030811_unstim_20121214_n192_01_08.RCC

tag: systolic/diastolic

tag: bmi


title: Daphnia_copper_96h_CuCl24_REF

source_name: CuCl2 exposure sample; whole Daphnia


title: 1189V042611_unstim_20121214_n193_01_01.RCC

tag: stimulation

tag: hours


title: 0836V030311_unstim_20121214_n192_01_06.RCC

tag: plate

tag: cartridge


title: 0441V022211_unstim_20121214_n192_01_05.RCC

tag: lane

tag: date of visit


title: 1130V011911_unstim_20121214_n192_01_04.RCC

tag: time of visit

tag: gender


title: 0930V062911_LPS_20121214_n192_01_02.RCC

tag: age (years)

tag: ethnicity


title: 1250V083011_LPS_20121214_n192_01_03.RCC

tag: million pbmc

tag: million dcs


title: 1040V030311_unstim_20121214_n192_01_07.RCC

tag: height (cm)

tag: weight (kg)


title: 1424V081811_IFNb_20121214_n192_01_01.RCC


title: 1393V060711_LPS_20121214_n191_01_12.RCC


title: 1355V060711_LPS_20121214_n191_01_11.RCC


title: 1W5

tag: genotype

tag: developmental stage


title: Daphnia_copper_96h_REF_bl2

tag: age when sampled

tag: tissue


title: 1Y2


title: 1Y3


title: 0695V060711_LPS_20121214_n191_01_10.RCC

tag: stimulation

tag: hours

tag: systolic/diastolic

tag: bmi


title: Daphnia_zinc_96h_bl4_REF

source_name: Zinc reference sample; whole Daphnia


title: 1320V060211_LPS_20121214_n191_01_09.RCC

tag: plate

tag: cartridge

tag: lane

tag: date of visit


title: Daphnia_copper_96h_REF_CuCl21


title: Daphnia_copper_96h_CuO3_REF

source_name: CuO exposure sample; whole Daphnia


title: Daphnia_zinc_96h_ZnCl24_REF

source_name: ZnCl2 exposure sample; whole Daphnia


title: 1292V060211_LPS_20121214_n191_01_08.RCC

tag: time of visit

tag: gender

tag: age (years)

tag: ethnicity


title: Daphnia_copper_96h_REF_bl1

source_name: Copper reference sample;  whole Daphnia


title: Daphnia_copper_96h_REF_CuCl22


title: Daphnia_copper_96h_REF_CuO1


title: Daphnia_copper_96h_REF_CuO2


title: Daphnia_copper_96h_CuO4_REF


title: 1335V060111_LPS_20121214_n191_01_07.RCC

tag: million pbmc

tag: million dcs

tag: height (cm)

tag: weight (kg)


title: Daphnia_copper_96h_bl3_REF

tag: age when sampled

tag: tissue


title: Daphnia_copper_96h_CuCl23_REF


title: Daphnia_zinc_96h_REF_bl2


title: Daphnia_zinc_96h_bl3_REF


title: 1133V071911_IFNb_20121215_n196_01_02.RCC

tag: stimulation

tag: hours


title: Daphnia_zinc_96h_ZnO4_REF

source_name: ZnO exposure sample; whole Daphnia


title: Daphnia_zinc_96h_ZnCl23_REF


title: Daphnia_zinc_96h_REF_ZnO2


title: Daphnia_zinc_96h_ZnO3_REF


title: 1305V053111_LPS_20121214_n191_01_06.RCC

tag: systolic/diastolic

tag: bmi


title: 1250V051711_LPS_20121214_n191_01_05.RCC

tag: plate

tag: cartridge


title: Daphnia_zinc_96h_REF_bl1


title: Daphnia_zinc_96h_REF_ZnCl21


title: Daphnia_zinc_96h_REF_ZnCl22


title: Normal_721

type: genomic

city: Seoul

first: SUN YOUNG

last: LEE

address: Olympicro

country: South Korea

institute: Asan Medical Center

hyb_protocol: Samples passing these QC steps were next end-labeled with a biotinylated nucleoitde using Terminal Deoxynucleotidyl Transferase (TdT). The end-labeled products were added to a hybridization solution, denatured, and added to a CytoScan™ HD Array (one array per sample).

scan_protocol: After hybridization was complete, the DNA sample was removed from each microarray and replaced with Array Holding Buffer. Arrays were then washed on the Fluidics Station 450 using AGCC software (Affymetrix GeneChip® Command Console, Version 3.2.2) This protocol includes 6 cycles of 5 mixes/cycle with low stringency Wash Buffer A (6X SSPE, 0.01% Tween-20) at 25℃ followed by 24 cycles of 5 mixes/cycle with high stringency Wash Buffer B (0.6X SSPE, 0.01% Tween-20) at 45℃. Binding of the biotinylated targets was detected by incubating the array for 10 min in a Streptavidin–Phycoerythrin (SAPE) solution at 25℃ followed by a post stain wash comprised of 6 cycles of 5 mixes/cycle with Wash Buffer A at 25℃. A second round of staining was then completed using a 10 min incubation in Anti-Streptavidin Antibody Stain Solution at 25℃ followed by a third stain for 10 min in SAPE solution at 25℃ and a final wash consisting of 10 cycles of 6 mixes/cycle with Wash Buffer A at 30℃, filling of the array with Array Holding Buffer, and a hold at 25℃.

data_processing:
Data processing of CEL files was done using Nexus Copy Number 6.1 software
Primary data description: 15 files of triplet pairs of normal, primary colorectal carcinoma and matched liver metastases tissues

label: biotin

molecule: genomic DNA

source_name: normal rectum

extract_protocol: Each DNA (250ng gDNA) aliquot was 96 well plate. Then, 24 of the samples on a plate were subjected to treatment with Nsp I restriction enzyme. After inactivation of the restriction enzyme, the sticky ends of the digested DNA were ligated to Nsp I adaptor/primers using T4 ligase. Aliquots from each ligated product were added to four separate plates for PCR amplification using a universal primer. The products of all four PCR reactions for each subject were combined and then purified with purification magnetic beads in 1.5ml microtube. The yield of each amplified DNA sample was assessed by UV spectrophotometry on a microplate reader. Any DNA showing lower than expected yield (≥ 3mg/ml) or an unusual size distribution was flagged and not processed further. Subsequently, each DNA was fragmented between 25 to 125 bp using partial DNase I digestion and the size distribution of the fragmented amplicons assessed by agarose gel electrophoresis (4% agarose in Tris-Acetate-EDTA buffer).

value: rectum

tag: cell type

value: normal rectum


title: CLM_721

source_name: colorectal liver metastasis

label_protocol: The end-labeled products were added to a hybridization solution, denatured, and added to a CytoScan™ HD Array (one array per sample).

value: liver

value: colorectal liver metastasis


title: CRC_718

source_name: primary colorectal cancer

value: colon

value: primary colorectal cancer


title: Daphnia_zinc_96h_REF_ZnO1


title: 0071V090711_IFNb_20121214_n191_01_03.RCC

value: IFNb

tag: lane

tag: date of visit

tag: time of visit

value: M


title: Normal_718

source_name: normal colon

value: normal colon


title: CRC_721


title: 1114V042011_dNS1_20121214_n190_01_12.RCC

tag: gender

tag: age (years)

tag: ethnicity

value: African-American


title: 1037V090711_IFNb_20121214_n191_01_04.RCC

tag: million pbmc

tag: million dcs

tag: height (cm)


title: CRC_627

tag: tissue


title: CLM_707


title: Normal_707


title: 1228V083011_IFNb_20121214_n191_01_01.RCC

tag: stimulation

value: F

value: East Asian

tag: weight (kg)


title: 1170V042011_dNS1_20121214_n190_01_10.RCC

tag: hours

tag: systolic/diastolic


title: Normal_627


title: 1250V083011_IFNb_20121214_n191_01_02.RCC

tag: plate

value: Caucasian

tag: bmi


title: 1203V042011_dNS1_20121214_n190_01_11.RCC

tag: cartridge


title: 1191V041911_dNS1_20121214_n190_01_09.RCC

tag: lane


title: CLM_627

tag: cell type


title: CRC_707


title: 1157V041311_dNS1_20121214_n190_01_07.RCC

tag: date of visit

tag: time of visit


title: CLM_526


title: CLM_718


title: 1197V041211_dNS1_20121214_n190_01_06.RCC

tag: gender

tag: age (years)


title: Normal_526


title: 1200V041311_dNS1_20121214_n190_01_08.RCC

tag: ethnicity

tag: million pbmc


title: CRC_526


title: Normal_523


title: 1165V041211_dNS1_20121214_n190_01_03.RCC

tag: million dcs

tag: height (cm)


title: CRC_509

tag: tissue


title: 1238V040511_dNS1_20121214_n190_01_01.RCC

tag: stimulation

tag: weight (kg)


title: 1276V060811_LPS_20121214_n189_01_12.RCC

value: LPS

tag: hours

tag: systolic/diastolic


title: CLM_523


title: Normal_509


title: 1186V041211_dNS1_20121214_n190_01_05.RCC

tag: plate

tag: bmi


title: Normal_503


title: CRC_503


title: 1250V083011_unstim_20121214_n189_01_11.RCC

value: unstim

tag: cartridge

tag: lane


title: CLM_509

tag: cell type


title: 1228V083011_unstim_20121214_n189_01_10.RCC

tag: date of visit

tag: time of visit


title: CLM_503


title: 1166V041211_dNS1_20121214_n190_01_04.RCC

tag: gender

tag: age (years)


title: CRC_523


title: CRC_413


title: CLM_413


title: Normal_413


title: 0258V111710_dNS1_20121214_n189_01_08.RCC

tag: ethnicity

tag: million pbmc


title: 0428V110910_dNS1_20121214_n189_01_05.RCC

tag: million dcs

tag: height (cm)


title: 0783V021611_dNS1_20121214_n189_01_09.RCC

tag: stimulation


title: 1162V040711_dNS1_20121214_n190_01_02.RCC

tag: weight (kg)


title: 1037V120210_dNS1_20121214_n189_01_02.RCC

tag: hours


title: 0803V021011_dNS1_20121214_n189_01_03.RCC

tag: systolic/diastolic


title: Normal_381

tag: tissue


title: CLM_381


title: 1016V051910_dNS1_20121214_n189_01_01.RCC

tag: plate

tag: bmi


title: CRC_353


title: 0822V051310_dNS1_20121213_n188_01_12.RCC

tag: cartridge

tag: lane


title: 1021V111110_dNS1_20121214_n189_01_07.RCC

tag: date of visit


title: CLM_353

tag: cell type


title: CRC_278


title: 0283V111710_LPS_20121213_n188_01_10.RCC

tag: time of visit

tag: gender


title: 0783V021611_LPS_20121213_n188_01_11.RCC

tag: age (years)

tag: ethnicity


title: CRC_381


title: Normal_278


title: 0126V021011_dNS1_20121214_n189_01_04.RCC

tag: million pbmc

tag: million dcs


title: 0144V111010_LPS_20121213_n188_01_07.RCC

tag: stimulation

tag: height (cm)


title: CLM_262


title: Normal_262


title: CLM_278


title: 0428V110910_LPS_20121213_n188_01_06.RCC

tag: hours

tag: weight (kg)


title: CRC_262

tag: tissue


title: Normal_353


title: 0125V071310_LPS_20121213_n188_01_05.RCC

tag: plate

tag: systolic/diastolic


title: 0144V111010_dNS1_20121214_n189_01_06.RCC

tag: cartridge

tag: bmi


title: CRC_250


title: 0108V063010_LPS_20121213_n188_01_04.RCC

tag: lane

tag: date of visit


title: Normal_250

tag: cell type


title: 1098V021011_LPS_20121213_n188_01_03.RCC

tag: time of visit

tag: gender


title: CRC_185


title: 0126V021011_LPS_20121213_n188_01_02.RCC

tag: age (years)

tag: ethnicity


title: Normal_185


title: 0803V021011_LPS_20121213_n188_01_01.RCC

tag: million pbmc

tag: million dcs


title: CLM_185


title: 0258V111710_LPS_20121213_n188_01_09.RCC

tag: stimulation

tag: height (cm)


title: 1037V120210_LPS_20121213_n187_01_10.RCC

tag: hours

tag: weight (kg)


title: 1021V111110_LPS_20121213_n188_01_08.RCC

tag: plate


title: 0603V121510_LPS_20121213_n187_01_11.RCC

tag: systolic/diastolic


title: 1016V051910_LPS_20121213_n187_01_09.RCC

tag: cartridge


title: 0100V051910_LPS_20121213_n187_01_08.RCC

tag: bmi


title: 0004V061610_LPS_20121213_n187_01_07.RCC

tag: lane


title: CLM_250

tag: tissue


title: 1005V051310_LPS_20121213_n187_01_05.RCC

tag: date of visit


title: 0467V121610_LPS_20121213_n187_01_12.RCC

tag: time of visit


title: 0783V021611_unstim_20121213_n187_01_04.RCC

tag: gender


title: 0822V051310_LPS_20121213_n187_01_06.RCC

tag: age (years)


title: 0578V111810_unstim_20121213_n187_01_03.RCC

tag: ethnicity


title: 1070V111610_unstim_20121213_n186_01_12.RCC

tag: million pbmc


title: 0935V111810_unstim_20121213_n187_01_02.RCC

tag: million dcs


title: 0751V111710_unstim_20121213_n187_01_01.RCC

tag: stimulation


title: 0472V111610_unstim_20121213_n186_01_10.RCC

tag: height (cm)


title: 0520V111610_unstim_20121213_n186_01_11.RCC

tag: hours


title: Line T87, replicate 2

city: Nouzilly

first: Julie

last: Collet

address: Centre INRAE

country: France

institute: INRAE

description: Line T87, replicate 2

hyb_protocol: Hybridization was performed by The Centre for Genomics and Bioinformatics, Bloomington, IN USA, following standard NimbleGen operating protocol. See www.nimblegen.com.

scan_protocol: Scanning was performed by The Centre for Genomics and Bioinformatics, Bloomington, IN USA, following standard NimbleGen operating protocol. See www.nimblegen.com.

data_processing: The raw data (.pair file) was normalized via a log (base 10) transformation. Prior to data analysis, we determined the mean of the two replicates per probe. We then selected the 3385 gene expression data previously used by McGuigan et al. (GSE49815) and only analyzed those.

organism: Drosophila serrata

source_name: Line T87, replicate 2

label_protocol: Labeling was performed by The Centre for Genomics and Bioinformatics, Bloomington, IN USA, following standard NimbleGen operating protocol. See www.nimblegen.com.

growth_protocol: Samples were collected from a panel of 41 inbred lines of D. serrata, where whole-body samples of adult males were used. All flies were reared in 10ml vials of a standard yeast medium and maintained at 25°C with a 12 hour day/night cycle. Each line was propagated by single pair matings (1 virgin male with 1 virgin female) in each of 4 replicate vials; pairs were left to mate and lay eggs for 96 hours. Male offspring were collected as virgins from each replicate vial per line, and held in groups of 5 flies until 4 days post ecolsion. Two replicate pools of 20 flies per line were collected without the use of CO2 anaesthesia and snap frozen in liquid nitrogen.

extract_protocol: Each whole-body pool was homogenized in Trizol® and immediately stored at -80 degrees Celsius. Total RNA extraction was performed using Trizol® as per the manufacturer's (Invitrogen) protocol. RNA was then purified using RNeasy kits® according to manufacturer's (Qiagen) instructions.

tag: inbred line

value: male

tag: developmental stage

value: adult

value: whole body


title: Line T75, replicate 2

description: Line T75, replicate 2

source_name: Line T75, replicate 2


title: Line T96, replicate 2

description: Line T96, replicate 2

source_name: Line T96, replicate 2


title: Line T95, replicate 2

description: Line T95, replicate 2

source_name: Line T95, replicate 2


title: Line T76, replicate 2

description: Line T76, replicate 2

source_name: Line T76, replicate 2


title: Line T79, replicate 2

description: Line T79, replicate 2

source_name: Line T79, replicate 2


title: Line T8, replicate 2

description: Line T8, replicate 2

source_name: Line T8, replicate 2


title: 0736V111710_unstim_20121213_n186_01_08.RCC

tag: plate

tag: weight (kg)

tag: systolic/diastolic


title: 0258V111710_unstim_20121213_n186_01_07.RCC

tag: cartridge

tag: lane

tag: bmi


title: 0283V111710_unstim_20121213_n186_01_09.RCC

tag: date of visit

tag: time of visit


title: Line T7, replicate 2

description: Line T7, replicate 2

source_name: Line T7, replicate 2

tag: gender

tag: tissue


title: 0624V111810_unstim_20121213_n186_01_06.RCC

tag: age (years)

tag: ethnicity

tag: million pbmc


title: Line T70, replicate 2

description: Line T70, replicate 2

source_name: Line T70, replicate 2


title: Line T85, replicate 2

description: Line T85, replicate 2

source_name: Line T85, replicate 2


title: Line T66, replicate 2

description: Line T66, replicate 2

source_name: Line T66, replicate 2


title: 0744V111110_unstim_20121213_n186_01_04.RCC

tag: stimulation

value: MULTI-RACIAL

tag: million dcs

tag: height (cm)


title: 0217V111810_unstim_20121213_n186_01_05.RCC

tag: hours


title: Line T68, replicate 2

description: Line T68, replicate 2

source_name: Line T68, replicate 2

tag: inbred line

tag: developmental stage


title: Line T84, replicate 2

description: Line T84, replicate 2

source_name: Line T84, replicate 2


title: 0295V111010_unstim_20121213_n186_01_02.RCC

tag: plate

tag: weight (kg)

tag: systolic/diastolic


title: Line T65, replicate 2

description: Line T65, replicate 2

source_name: Line T65, replicate 2


title: 0052V111010_unstim_20121213_n186_01_01.RCC

tag: cartridge

tag: lane

tag: bmi


title: 0144V111010_unstim_20121213_n185_01_12.RCC

tag: date of visit

tag: time of visit

tag: gender


title: 0152V110910_unstim_20121213_n185_01_11.RCC

tag: age (years)

tag: ethnicity


title: 0672V111010_unstim_20121213_n185_01_10.RCC

tag: stimulation

tag: million pbmc


title: 0428V110910_unstim_20121213_n185_01_09.RCC

tag: million dcs

tag: height (cm)


title: Line T59, replicate 2

description: Line T59, replicate 2

source_name: Line T59, replicate 2

tag: inbred line

tag: tissue


title: Line T55, replicate 2

description: Line T55, replicate 2

source_name: Line T55, replicate 2

tag: developmental stage


title: Line T58, replicate 2

description: Line T58, replicate 2

source_name: Line T58, replicate 2


title: Line T64, replicate 2

description: Line T64, replicate 2

source_name: Line T64, replicate 2


title: 0028V062210_unstim_20121213_n185_01_08.RCC

tag: hours

tag: plate

tag: weight (kg)


title: Line T60, replicate 2

description: Line T60, replicate 2

source_name: Line T60, replicate 2


title: Line T53, replicate 2

description: Line T53, replicate 2

source_name: Line T53, replicate 2


title: 1021V111110_unstim_20121213_n186_01_03.RCC

tag: cartridge

tag: lane

tag: systolic/diastolic


title: 0844V062210_unstim_20121213_n185_01_06.RCC

tag: date of visit

tag: time of visit

tag: bmi


title: 0227V062310_unstim_20121213_n185_01_07.RCC

tag: gender

tag: age (years)

tag: ethnicity


title: 0784V062310_unstim_20121213_n185_01_05.RCC

tag: stimulation

tag: million pbmc

tag: million dcs


title: 0125V071310_unstim_20121213_n185_01_04.RCC

tag: height (cm)


title: 0097V071410_unstim_20121213_n185_01_03.RCC


title: Line T4, replicate 2

description: Line T4, replicate 2

source_name: Line T4, replicate 2

tag: inbred line

tag: developmental stage

tag: tissue


title: Line T46, replicate 2

description: Line T46, replicate 2

source_name: Line T46, replicate 2


title: Line T54, replicate 2

description: Line T54, replicate 2

source_name: Line T54, replicate 2


title: Line T39, replicate 2

description: Line T39, replicate 2

source_name: Line T39, replicate 2


title: 0148V071310_unstim_20121213_n185_01_02.RCC

tag: hours

tag: plate

tag: weight (kg)


title: Line T35, replicate 2

description: Line T35, replicate 2

source_name: Line T35, replicate 2


title: Line T5, replicate 2

description: Line T5, replicate 2

source_name: Line T5, replicate 2


title: 0804V071310_unstim_20121213_n184_01_11.RCC

tag: cartridge

tag: lane

tag: systolic/diastolic


title: 1030V071410_unstim_20121213_n184_01_12.RCC

tag: date of visit

tag: time of visit

tag: bmi


title: Line T31, replicate 2

description: Line T31, replicate 2

source_name: Line T31, replicate 2

tag: gender


title: Line T42, replicate 2

description: Line T42, replicate 2

source_name: Line T42, replicate 2


title: Line T40, replicate 2

description: Line T40, replicate 2

source_name: Line T40, replicate 2


title: 0984V062910_unstim_20121213_n184_01_09.RCC

tag: stimulation

tag: age (years)

tag: ethnicity


title: Line T27, replicate 2

description: Line T27, replicate 2

source_name: Line T27, replicate 2


title: Line T25, replicate 2

description: Line T25, replicate 2

source_name: Line T25, replicate 2


title: Line T38, replicate 2

description: Line T38, replicate 2

source_name: Line T38, replicate 2


title: 0998V070610_unstim_20121213_n184_01_07.RCC

tag: million pbmc

tag: million dcs

tag: height (cm)


title: 0986V070610_unstim_20121213_n184_01_06.RCC


title: 1154V021011_unstim_20121213_n184_01_05.RCC


title: 1041V071310_unstim_20121213_n185_01_01.RCC


title: Line T30, replicate 2

description: Line T30, replicate 2

source_name: Line T30, replicate 2

tag: inbred line

tag: developmental stage

tag: tissue


title: Line T17, replicate 2

description: Line T17, replicate 2

source_name: Line T17, replicate 2


title: Line T20, replicate 2

description: Line T20, replicate 2

source_name: Line T20, replicate 2


title: 0659V071310_unstim_20121213_n184_01_10.RCC

tag: hours

tag: plate

tag: weight (kg)


title: Line T13, replicate 2

description: Line T13, replicate 2

source_name: Line T13, replicate 2


title: Line T19, replicate 2

description: Line T19, replicate 2

source_name: Line T19, replicate 2


title: 1098V021011_unstim_20121213_n184_01_04.RCC

tag: cartridge

tag: lane

tag: systolic/diastolic


title: 0126V021011_unstim_20121213_n184_01_03.RCC

tag: date of visit

tag: time of visit

tag: bmi


title: Line T15, replicate 2

description: Line T15, replicate 2

source_name: Line T15, replicate 2

tag: gender


title: 0803V021011_unstim_20121213_n184_01_02.RCC

tag: stimulation

tag: age (years)

tag: ethnicity


title: 0381V020111_unstim_20121213_n184_01_01.RCC

tag: million pbmc

tag: million dcs

tag: height (cm)


title: 0694V121510_unstim_20121213_n183_01_12.RCC


title: 0603V121510_unstim_20121213_n183_01_10.RCC


title: 0467V121610_unstim_20121213_n183_01_11.RCC


title: Line T14, replicate 2

description: Line T14, replicate 2

source_name: Line T14, replicate 2

tag: inbred line

tag: developmental stage

tag: tissue


title: 0787V121610_unstim_20121213_n183_01_08.RCC

tag: hours

tag: plate

tag: weight (kg)


title: Line T96, replicate 1

description: Line T96, replicate 1

source_name: Line T96, replicate 1


title: 1083V121410_unstim_20121213_n183_01_07.RCC

tag: cartridge

tag: lane

tag: systolic/diastolic


title: 1075V120710_unstim_20121213_n183_01_05.RCC

tag: date of visit

tag: time of visit

tag: bmi


title: 1084V120710_unstim_20121213_n183_01_04.RCC

tag: stimulation

tag: gender

tag: age (years)


title: Line T10, replicate 2

description: Line T10, replicate 2

source_name: Line T10, replicate 2


title: Line T95, replicate 1

description: Line T95, replicate 1

source_name: Line T95, replicate 1


title: Line T87, replicate 1

description: Line T87, replicate 1

source_name: Line T87, replicate 1


title: 1072V121610_unstim_20121213_n183_01_09.RCC

tag: ethnicity

tag: million pbmc

tag: million dcs


title: 0030V120810_unstim_20121213_n183_01_02.RCC

tag: height (cm)


title: 0645V121410_unstim_20121213_n183_01_01.RCC


title: Line T79, replicate 1

description: Line T79, replicate 1

source_name: Line T79, replicate 1

tag: inbred line

tag: developmental stage

tag: tissue


title: Line T7, replicate 1

description: Line T7, replicate 1

source_name: Line T7, replicate 1


title: 0943V120810_unstim_20121213_n182_01_12.RCC

tag: hours

tag: plate

tag: weight (kg)


title: Line T8, replicate 1

description: Line T8, replicate 1

source_name: Line T8, replicate 1


title: Line T76, replicate 1

description: Line T76, replicate 1

source_name: Line T76, replicate 1


title: Line T85, replicate 1

description: Line T85, replicate 1

source_name: Line T85, replicate 1


title: 1086V112410_unstim_20121213_n182_01_11.RCC

tag: cartridge

tag: lane

tag: systolic/diastolic


title: 1044V121410_unstim_20121213_n183_01_06.RCC

tag: date of visit

tag: time of visit

tag: bmi


title: Line T66, replicate 1

description: Line T66, replicate 1

source_name: Line T66, replicate 1

tag: gender


title: 1036V112410_unstim_20121213_n182_01_10.RCC

tag: stimulation

tag: age (years)

tag: ethnicity


title: Line T84, replicate 1

description: Line T84, replicate 1

source_name: Line T84, replicate 1


title: Line T75, replicate 1

description: Line T75, replicate 1

source_name: Line T75, replicate 1


title: 0430V120710_unstim_20121213_n183_01_03.RCC

tag: million pbmc

tag: million dcs

tag: height (cm)


title: Line T68, replicate 1

description: Line T68, replicate 1

source_name: Line T68, replicate 1

tag: inbred line

tag: developmental stage

tag: tissue


title: 0979V120910_unstim_20121213_n182_01_09.RCC

tag: hours

tag: plate

tag: weight (kg)


title: 1042V112410_unstim_20121213_n182_01_08.RCC

tag: cartridge

tag: lane

tag: systolic/diastolic


title: 0546V113010_unstim_20121213_n182_01_07.RCC

tag: date of visit

tag: time of visit

tag: bmi


title: 1017V113010_unstim_20121213_n182_01_06.RCC

tag: stimulation

tag: gender

tag: age (years)


title: 1029V113010_unstim_20121213_n182_01_05.RCC

tag: ethnicity

tag: million pbmc

tag: million dcs


title: Line T70, replicate 1

description: Line T70, replicate 1

source_name: Line T70, replicate 1

tag: inbred line

tag: developmental stage


title: Line T65, replicate 1

description: Line T65, replicate 1

source_name: Line T65, replicate 1

tag: tissue


title: 1037V120210_unstim_20121213_n182_01_04.RCC

tag: hours

tag: plate

tag: height (cm)


title: 1031V120210_unstim_20121213_n182_01_03.RCC

tag: cartridge

tag: lane

tag: weight (kg)


title: Line T59, replicate 1

description: Line T59, replicate 1

source_name: Line T59, replicate 1


title: Line T64, replicate 1

description: Line T64, replicate 1

source_name: Line T64, replicate 1


title: 1057V120210_unstim_20121213_n182_01_02.RCC

tag: date of visit

tag: time of visit

tag: systolic/diastolic


title: Line T58, replicate 1

description: Line T58, replicate 1

source_name: Line T58, replicate 1

tag: gender


title: 0143V120110_unstim_20121213_n182_01_01.RCC

tag: stimulation

tag: age (years)

tag: bmi


title: Line T55, replicate 1

description: Line T55, replicate 1

source_name: Line T55, replicate 1


title: 0944V112310_unstim_20121213_n181_01_12.RCC

tag: ethnicity

tag: million pbmc

tag: million dcs


title: Line T54, replicate 1

description: Line T54, replicate 1

source_name: Line T54, replicate 1

tag: inbred line

tag: developmental stage

tag: tissue


title: Line T46, replicate 1

description: Line T46, replicate 1

source_name: Line T46, replicate 1


title: 1078V112310_unstim_20121213_n181_01_11.RCC

tag: hours

tag: plate

tag: height (cm)


title: Line T60, replicate 1

description: Line T60, replicate 1

source_name: Line T60, replicate 1


title: 1062V112310_unstim_20121213_n181_01_10.RCC

tag: cartridge

tag: lane

tag: weight (kg)


title: Line T40, replicate 1

description: Line T40, replicate 1

source_name: Line T40, replicate 1


title: Line T53, replicate 1

description: Line T53, replicate 1

source_name: Line T53, replicate 1


title: Line T39, replicate 1

description: Line T39, replicate 1

source_name: Line T39, replicate 1


title: Line T42, replicate 1

description: Line T42, replicate 1

source_name: Line T42, replicate 1


title: Line T5, replicate 1

description: Line T5, replicate 1

source_name: Line T5, replicate 1


title: 1023V112310_unstim_20121213_n181_01_08.RCC

tag: date of visit

tag: time of visit

tag: systolic/diastolic


title: Line T4, replicate 1

description: Line T4, replicate 1

source_name: Line T4, replicate 1

tag: gender


title: 1016V051910_unstim_20121213_n181_01_06.RCC

tag: stimulation

tag: age (years)

tag: bmi


title: 0358V051910_unstim_20121213_n181_01_05.RCC

tag: ethnicity

tag: million pbmc

tag: million dcs


title: 0100V051910_unstim_20121213_n181_01_04.RCC


title: Line T31, replicate 1

description: Line T31, replicate 1

source_name: Line T31, replicate 1

tag: inbred line

tag: developmental stage

tag: tissue


title: Line T30, replicate 1

description: Line T30, replicate 1

source_name: Line T30, replicate 1


title: Line T38, replicate 1

description: Line T38, replicate 1

source_name: Line T38, replicate 1


title: Line T25, replicate 1

description: Line T25, replicate 1

source_name: Line T25, replicate 1


title: 0247V061510_unstim_20121213_n181_01_03.RCC

tag: hours

tag: plate

tag: height (cm)


title: 0725V061510_unstim_20121213_n181_01_02.RCC

tag: cartridge

tag: lane

tag: weight (kg)


title: 0811V061510_unstim_20121213_n181_01_01.RCC

tag: date of visit

tag: time of visit

tag: systolic/diastolic


title: 0965V112310_unstim_20121213_n181_01_09.RCC

tag: stimulation

tag: gender

tag: age (years)


title: Line T27, replicate 1

description: Line T27, replicate 1

source_name: Line T27, replicate 1


title: Line T20, replicate 1

description: Line T20, replicate 1

source_name: Line T20, replicate 1


title: Line T35, replicate 1

description: Line T35, replicate 1

source_name: Line T35, replicate 1


title: 0523V051910_unstim_20121213_n181_01_07.RCC

tag: ethnicity

tag: million pbmc

tag: bmi


title: 0035V061610_unstim_20121213_n180_01_12.RCC

tag: million dcs


title: Line T19, replicate 1

description: Line T19, replicate 1

source_name: Line T19, replicate 1

tag: inbred line

tag: developmental stage

tag: tissue


title: 0004V061610_unstim_20121213_n180_01_11.RCC

tag: hours

tag: plate

tag: height (cm)


title: 0997V060810_unstim_20121213_n180_01_10.RCC

tag: cartridge

tag: lane

tag: weight (kg)


title: Line T14, replicate 1

description: Line T14, replicate 1

source_name: Line T14, replicate 1


title: Line T17, replicate 1

description: Line T17, replicate 1

source_name: Line T17, replicate 1


title: Line T15, replicate 1

description: Line T15, replicate 1

source_name: Line T15, replicate 1


title: 0842V060810_unstim_20121213_n180_01_08.RCC

tag: date of visit

tag: time of visit

tag: systolic/diastolic


title: 0151V070610_unstim_20121213_n184_01_08.RCC

tag: stimulation

tag: gender

tag: age (years)


title: Line T10, replicate 1

description: Line T10, replicate 1

source_name: Line T10, replicate 1


title: 0510V060810_unstim_20121213_n180_01_09.RCC

tag: ethnicity

tag: million pbmc

tag: bmi


title: 1038V060810_unstim_20121213_n180_01_07.RCC

tag: million dcs


title: 0372V060210_unstim_20121213_n180_01_05.RCC


title: 0816V060910_unstim_20121213_n180_01_06.RCC


title: 1012V060210_unstim_20121213_n180_01_03.RCC


title: 1030V060210_unstim_20121213_n180_01_04.RCC


title: 0698V060110_unstim_20121213_n180_01_01.RCC


title: 0788V051110_unstim_20121213_n179_01_12.RCC


title: 1018V060210_unstim_20121213_n180_01_02.RCC


title: Line T12, replicate 1

description: Line T12, replicate 1

source_name: Line T12, replicate 1

tag: inbred line

tag: developmental stage

tag: tissue


title: 0982V050310_unstim_20121213_n179_01_10.RCC

tag: hours

tag: plate

tag: height (cm)


title: 0814V051110_unstim_20121213_n179_01_11.RCC

tag: cartridge

tag: lane

tag: weight (kg)


title: ACDMPV lung biological replicate 6

city: Houston

first: Partha

last: Sen

state: Texas

address: One Baylor Plaza

institute: Baylor College of Medicine

hyb_protocol: Standard llumina hybridization protocol

scan_protocol: Standard Illumina scanning protocol

data_processing: Data were used using the GenomeStudio software (Illumina).

source_name: Frozen lung

label_protocol: Biotinylated cRNA was prepared as per manufacturer's instructions (Illumina).

extract_protocol: RNA was extracted from lungs using TRIzol (Invitrogen) followed by clean-up with Rneasy column (Qiagen) as per manufacturer's instructions. RNA quality was assesses on a BioRad Bioanalyzer.

tag: disease condition

value: ACDMPV


title: ACDMPV lung biological replicate 7


title: 0335V051110_unstim_20121213_n179_01_09.RCC

tag: stimulation

tag: date of visit

tag: time of visit

tag: systolic/diastolic


title: Line T13, replicate 1

description: Line T13, replicate 1

source_name: Line T13, replicate 1

tag: gender


title: ACDMPV lung biological replicate 5


title: ACDMPV lung biological replicate 8


title: ACDMPV lung biological replicate 3


title: 0104V051110_unstim_20121213_n179_01_08.RCC

tag: age (years)

tag: ethnicity

tag: million pbmc

tag: bmi


title: 0502V051810_unstim_20121213_n179_01_04.RCC

tag: million dcs


title: 0092V051110_unstim_20121213_n179_01_07.RCC

tag: hours


title: ACDMPV lung biological replicate 1


title: Control lung biological replicate 3

value: Control


title: ACDMPV lung biological replicate 2


title: Control lung biological replicate 2


title: ACDMPV lung biological replicate 4


title: 0822V051310_unstim_20121213_n179_01_06.RCC

tag: plate


title: Control lung biological replicate 5


title: 0992V051310_unstim_20121213_n179_01_05.RCC

tag: height (cm)


title: 0422V051810_unstim_20121213_n179_01_03.RCC

tag: cartridge


title: Control lung biological replicate 4


title: 0750V051810_unstim_20121213_n179_01_02.RCC

tag: lane


title: Line T12, replicate 2

description: Line T12, replicate 2

source_name: Line T12, replicate 2

tag: inbred line

tag: developmental stage

tag: tissue


title: 0419V051810_unstim_20121213_n178_01_12.RCC

tag: stimulation

tag: date of visit

tag: weight (kg)


title: 0235V051810_unstim_20121213_n178_01_11.RCC

tag: time of visit

tag: gender

tag: systolic/diastolic


title: 0969V042710_unstim_20121213_n178_01_09.RCC

tag: age (years)

tag: ethnicity

tag: million pbmc


title: 0747V042710_unstim_20121213_n178_01_10.RCC

tag: hours

tag: million dcs

tag: bmi


title: 0986V050310_unstim_20121213_n178_01_08.RCC

tag: plate

tag: cartridge

tag: height (cm)


title: 0763V041510_unstim_20121213_n178_01_07.RCC

tag: lane


title: Control lung biological replicate 1

tag: disease condition


title: 0369V041310_unstim_20121213_n178_01_05.RCC

tag: stimulation


title: 0684V041310_unstim_20121213_n178_01_06.RCC

tag: date of visit


title: 0008V042910_unstim_20121213_n178_01_04.RCC

tag: weight (kg)


title: 0981V050310_unstim_20121213_n178_01_03.RCC

tag: time of visit


title: 0072V043010_unstim_20121213_n178_01_01.RCC

tag: gender


title: 1005V051310_unstim_20121213_n179_01_01.RCC

tag: systolic/diastolic


title: 0151V040910_unstim_20121213_n177_01_11.RCC

tag: age (years)


title: 0107V042710_unstim_20121213_n178_01_02.RCC

tag: ethnicity


title: 0125V040810_unstim_20121213_n177_01_09.RCC

tag: million pbmc


title: 5370941012_D

first: Insuk

last: Sohn

address: 50, Irwon-Dong, Gangnam-Gu

institute: samsung cancer research Institute

description: FFPE material 5370941012_D.AVG_Signal

hyb_protocol: Standard Illumina hybridization protocol

data_processing: The software package to extract raw data was Genomestudio.

source_name: FFPE Gastric Adenocarcinoma

label_protocol: RNA was labelled using the WG-DASL kit from Illumina.

extract_protocol: RNA was extracted using a High Pure RNA Paraffin Kit protocol - Roche.

tag: status (0=non-recurrence, 1=recurrence)

tag: recurrence free survival time (month)

tag: pathological stage


title: 5370941012_E

description: FFPE material 5370941012_E.AVG_Signal


title: 5370941011_A

description: FFPE material 5370941011_A.AVG_Signal


title: 0282V040910_unstim_20121213_n177_01_12.RCC

tag: hours

tag: plate

tag: million dcs

tag: bmi


title: 5370941012_B

description: FFPE material 5370941012_B.AVG_Signal


title: 5370941012_H

description: FFPE material 5370941012_H.AVG_Signal


title: 5370941011_D

description: FFPE material 5370941011_D.AVG_Signal


title: 0371V040510_unstim_20121213_n177_01_08.RCC

tag: cartridge

tag: lane

tag: height (cm)


title: 5370941012_F

description: FFPE material 5370941012_F.AVG_Signal


title: 1007V050410_unstim_20121213_n177_01_06.RCC

tag: stimulation

tag: date of visit

tag: weight (kg)


title: 5370908048_E

description: FFPE material 5370908048_E.AVG_Signal


title: 5370941011_C

description: FFPE material 5370941011_C.AVG_Signal


title: 5370941011_F

description: FFPE material 5370941011_F.AVG_Signal


title: 5370908048_F

description: FFPE material 5370908048_F.AVG_Signal


title: 5370908048_D

description: FFPE material 5370908048_D.AVG_Signal


title: 5370941011_E

description: FFPE material 5370941011_E.AVG_Signal


title: 5370941012_G

description: FFPE material 5370941012_G.AVG_Signal


title: 5370941011_B

description: FFPE material 5370941011_B.AVG_Signal


title: 5370908048_B

description: FFPE material 5370908048_B.AVG_Signal


title: 0263V040810_unstim_20121213_n177_01_10.RCC

tag: time of visit

tag: gender

tag: systolic/diastolic


title: 5370908048_A

description: FFPE material 5370908048_A.AVG_Signal


title: 0214V050410_unstim_20121213_n177_01_05.RCC

tag: age (years)

tag: ethnicity

tag: million pbmc


title: 0777V050410_unstim_20121213_n177_01_04.RCC


title: 5370908044_H

description: FFPE material 5370908044_H.AVG_Signal

tag: status (0=non-recurrence, 1=recurrence)

tag: recurrence free survival time (month)

tag: pathological stage


title: 0040V042910_unstim_20121213_n177_01_07.RCC

tag: hours

tag: plate

tag: million dcs


title: 0170V040210_unstim_20121213_n177_01_02.RCC

tag: cartridge

tag: lane

tag: bmi


title: 0889V040210_unstim_20121213_n177_01_03.RCC

tag: stimulation

tag: date of visit

tag: height (cm)


title: 0909V040110_unstim_20121213_n177_01_01.RCC

tag: time of visit

tag: gender

tag: weight (kg)


title: 0761V040110_unstim_20121213_n176_01_12.RCC

tag: age (years)

tag: ethnicity

tag: systolic/diastolic


title: 0018V032910_unstim_20121213_n176_01_11.RCC

tag: million pbmc


title: 5370908044_G

description: FFPE material 5370908044_G.AVG_Signal

tag: status (0=non-recurrence, 1=recurrence)

tag: recurrence free survival time (month)

tag: pathological stage


title: 1233V050311_LPS_20121213_n176_01_10.RCC

tag: hours

tag: plate

tag: million dcs


title: 1203V042011_LPS_20121213_n176_01_08.RCC

tag: cartridge

tag: lane

tag: bmi


title: 5370908048_C

description: FFPE material 5370908048_C.AVG_Signal


title: 1170V042011_LPS_20121213_n176_01_07.RCC

tag: stimulation

tag: date of visit

tag: height (cm)


title: 1191V041911_LPS_20121213_n176_01_06.RCC

tag: time of visit

tag: gender

tag: weight (kg)


title: 1114V042011_LPS_20121213_n176_01_09.RCC

tag: age (years)

tag: ethnicity

tag: systolic/diastolic


title: 5370908048_G

description: FFPE material 5370908048_G.AVG_Signal

tag: status (0=non-recurrence, 1=recurrence)

tag: recurrence free survival time (month)


title: 5370908044_F

description: FFPE material 5370908044_F.AVG_Signal

tag: pathological stage


title: 1200V041311_LPS_20121213_n176_01_05.RCC

tag: hours

tag: plate

tag: million pbmc


title: 5370908044_D

description: FFPE material 5370908044_D.AVG_Signal


title: 5370908044_A

description: FFPE material 5370908044_A.AVG_Signal


title: 5370908044_B

description: FFPE material 5370908044_B.AVG_Signal


title: 5370908044_E

description: FFPE material 5370908044_E.AVG_Signal


title: 5370908044_C

description: FFPE material 5370908044_C.AVG_Signal


title: 5370908043_G

description: FFPE material 5370908043_G.AVG_Signal


title: 1157V041311_LPS_20121213_n176_01_04.RCC

tag: cartridge

tag: lane

tag: million dcs


title: 5370908043_H

description: FFPE material 5370908043_H.AVG_Signal


title: 5370908043_E

description: FFPE material 5370908043_E.AVG_Signal


title: 5370908043_F

description: FFPE material 5370908043_F.AVG_Signal


title: 5370908043_D

description: FFPE material 5370908043_D.AVG_Signal


title: 1197V041211_LPS_20121213_n176_01_03.RCC

tag: stimulation

tag: date of visit

tag: bmi


title: 1186V041211_LPS_20121213_n176_01_02.RCC

tag: time of visit

tag: gender

tag: height (cm)


title: 5370908043_B

description: FFPE material 5370908043_B.AVG_Signal


title: 1166V041211_LPS_20121213_n176_01_01.RCC

tag: age (years)

tag: ethnicity

tag: weight (kg)


title: 5370908043_A

description: FFPE material 5370908043_A.AVG_Signal

tag: status (0=non-recurrence, 1=recurrence)

tag: recurrence free survival time (month)


title: 1165V041211_LPS_20121213_n175_01_12.RCC

tag: hours

tag: systolic/diastolic


title: 5370908043_C

description: FFPE material 5370908043_C.AVG_Signal

tag: pathological stage


title: 0136V033111_LPS_20121213_n175_01_10.RCC

tag: plate

tag: cartridge

tag: million pbmc


title: 1135V033111_LPS_20121213_n175_01_11.RCC

tag: stimulation

tag: lane

tag: million dcs


title: 1140V033011_LPS_20121213_n175_01_09.RCC

tag: date of visit

tag: time of visit

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title: 0019V031611_LPS_20121213_n175_01_08.RCC

tag: gender

tag: age (years)

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description: FFPE material 5370908034_F.AVG_Signal

tag: status (0=non-recurrence, 1=recurrence)


title: 5370908034_H

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tag: hours

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title: 5370908034_G

description: FFPE material 5370908034_G.AVG_Signal


title: 0876V030211_LPS_20121213_n175_01_03.RCC

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title: 5370908015_G

description: FFPE material 5370908015_G.AVG_Signal


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description: FFPE material 5370908034_B.AVG_Signal


title: 0707V030911_LPS_20121213_n175_01_02.RCC

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description: FFPE material 5370908015_H.AVG_Signal

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title: 5370908015_E

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title: 0582V030911_LPS_20121213_n175_01_01.RCC

tag: hours

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title: 0190V030911_LPS_20121212_n174_01_12.RCC

tag: plate

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title: 0581V030111_LPS_20121212_n174_01_08.RCC

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title: 1200V041311_IFNb_20121212_n174_01_01.RCC

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tag: ethnicity

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description: FFPE material 5368120016_B.AVG_Signal


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description: FFPE material 5368120008_G.AVG_Signal


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tag: age (years)

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title: 1133V021511_IFNb_20121212_n171_01_05.RCC

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