title: Microglia_Veh_AE1_rep3

first: Katrin

last: Andreasson

address: 1201 Welch Road, MSLS P210

department: Neurology and Neurological Sciences

description:
Veh_AE1_C
Affymetrix GeneChip Mouse Gene 1.0 ST Array

hyb_protocol: Performed by the Stanford University PAN facility using the GeneChip Hybridization protocol from Affymetrix (P/N 702731).

scan_protocol: Performed by the Stanford University PAN facility using a GCS 3000 Scanner and GeneChip Command Console software.

data_processing: The data were analyzed using Partek Genomics Suite version 6.5, using RMA default settings.

source_name: Primary microglia from P7 C57BL/6J mice, AE1-329 alone

label_protocol: Performed by the Stanford University PAN facility using the GeneChip Whole Transcript Sense Target Labeling Assay from Affymetrix (P/N 701880).

growth_protocol: Primary microglia were grown for three days before treatment in DMEM supplemented with 10% heat-inactivated FBS (HyClone, Logan, UT) and 100 U/ml each penicillin and streptomycin.

extract_protocol: Total RNA was isolated using Trizol followed by Qiagen RNeasy kit extraction according to the manufacturer's instructions.

treatment_protocol: Primary microglia were treated in growth media with oligomeric Aβ42, the EP4 agonist AE1-329, or vehicle solutions as detailed above.

tag: strain/background

value: postnatal day 7

value: microglia

tag: aβ treatment

value: vehicle (0.4% DMSO)

tag: ep4 agonist ae1-329 treatment

tag: treatment duration


title: 28hr GFP rep B

status: Public on Apr 25 2014

type: RNA

city: Hamilton

first: Andrew

middle: G.

last: McArthur

state: Ontario

address: 1280 Main Street West

department: Biochemistry & Biomedical Sciences

country: Canada

institute: McMaster University

description: 30 pooled zebrafish embryos

hyb_protocol: The samples were hybridized to a the Agilent 4x44K feature zebrafish microarray using the Agilent In situ Hybridization Kit Plus. Labeled cDNA was combined with the Agilent 10x Control Targets (to identify microarray corners). Microarray hybridizations were performed by Genome Technology Core at the Whitehead Institute for Biomedical Research (Cambridge, MA)

scan_protocol: Post-hybridization, microarray slides were washed as per the Agilent In situ Hybridization Kit Plus. Arrays were scanned with an Agilent DNA Microarray Scanner.

data_processing: Extraction of raw microarray results was performed using Agilent’s Feature Extraction software with background detrending (spatial and multiplicative). The data were normalized using a non-linear scaling method based on rank invariant probes. Cy3 signal saturated probes and probes not above background in all replicated were then removed prior to statistical analysis.

molecule: total RNA

organism: Danio rerio

source_name: 30 pooled zebrafish embryos

label_protocol: For each RNA sample, a single microarray was hybridized with 750 ng Cy3 labeled cDNA using Agilent’s standard conditions for single-color microarrays. The Agilent Low-Input QuickAmp Labeling Kit was used for labeling.

growth_protocol: The TL (Tupfel/Long fin mutations) wild-type strain of zebrafish was used for all experiments. Fertilized eggs were obtained from multiple group breedings from a Mass Embryo Production System (Aquatic Habitats, Apopka, FL) with ~200 fish at a ratio of 2 female per 1 male fish.  Procedures used in these experiments were approved by the Animal Care and Use Committee of the University of Alabama, Tuscaloosa, Alabama, USA.

extract_protocol: Total RNA was prepared using the RNA STAT60 protocol (Tel-Test, Inc., TX).  RNA was quantified using a Nanodrop 2000C spectrophotometer and assessed for quality using an Agilent 2100 Bioanalyzer Lab-on-chip system. Only samples with RNA integrity number (RIN) between 9.8-10 were used for microarray analysis.

treatment_protocol: A Narishige IM-300 microinjector was used to microinject 1-2 cell embryos with ~100 pg of dnMTF-1 IVT mRNA (~2.1 nL microinjection volume with a concentration 50 ng/µL IVT mRNA), or ~100 pg of enhanced green fluorescent protein (eGFP) IVT mRNA.  The dnMTF-1 is an eGFP fusion protein so proper microinjection and distribution throughout the embryo could be visualized by fluorescent microscopy.  Immediately after microinjection, embryos from each treatment were divided into 4 replicates of 30 pooled embryos and held in 25 mL of 0.3X Danieau’s at 28.5°C under a 14 hour light/10 hour dark cycle.  eGFP positive embryos (dnMTF-1 and eGFP) were collected at 28 and 36 hpf and flash frozen in liquid nitrogen for future RNA isolation and microarray hybridization.

tag: developmental stage

value: embryo

tag: treatment

value: injected at the 1-2 cell stage with ~100 pg of enhanced green fluorescent protein (eGFP) IVT mRNA

tag: sampling time

value: 28 hours post-fertilization (hpf)

tag: replicate


title: Microglia_Veh_Con_rep3

city: Stanford

state: CA

country: USA

institute: Stanford University

description:
Veh_Con_C
Affymetrix GeneChip Mouse Gene 1.0 ST Array

label: biotin

organism: Mus musculus

source_name: Primary microglia from P7 C57BL/6J mice, vehicle alone

tag: cell type

value: vehicle (0.001% EtOH)


title: U87-EV human glioblastoma xenograft - dibenzazepine treated 1

city: Oxford

first: Francesca

last: Buffa

address: The Weatherall Institute of Molecular Medicine

country: United Kingdom

institute: University of Oxford

description: U87-EV human glioblastoma xenograft tumour stroma component

hyb_protocol: Target cDNA generated from each sample was then processed as per manufacturer's recommendation using an Affymetrix GeneChip Instrument System (http://www.affymetrix.com/support/technical/manual/expression_manual.affx).  Briefly, spike controls were added to 10 µg fragmented cRNA before overnight hybridization to Affymetrix Mouse Genome 430 2.0 arrays. Arrays were then washed and stained with streptavidin-phycoerythrin, before imaging on an Affymetrix GeneChip (3000) scanner. A complete description of these procedures is available at http://bioinf.picr.man.ac.uk/mbcf/Downloads/GeneChip_Hyb_Wash_Scan_Protocol-CR-UK_v4.pdf.

scan_protocol: Affymetrix GeneChip (3000) scanner

data_processing: Following scanning, .DAT files were processed using Affymetrix GCOS, 1.1.1.052, to generate .CEL files. Subsequent data processing was performed on these data using the affy, simpleaffy and GCRMA packages from BioConductor and R (V.2.11). mRNA was estimated using GCRMA, quantile normalized and log2 transformed.

organism: Homo sapiens

source_name: U87-EV human glioblastoma xenograft_dibenzazepine

label_protocol: Total RNA from each sample was used to prepare biotinylated target RNA, with minor modifications from the manufacturer’s recommendations (http://www.affymetrix.com/support/technical/manual/expression_manual.affx). Briefly, 10 µg of total RNA was used to generate first-strand cDNA by using a T7-linked oligo(dT) primer. After second-strand synthesis, in vitro transcription was performed with biotinylated UTP and CTP (Enzo Diagnostics), resulting in ~100-fold amplification of RNA. A complete description of procedures is available at:  http://bioinf.picr.man.ac.uk/mbcf/Downloads/GeneChip_Target_Prep_Protocol-CR-UK_v4.pdf

growth_protocol: All protocols were carried out under Indiana University Institutional Animal Care and Use Committee (IACUC), and UK Home Office approved protocols and regulations. 107 Human glioblastoma U87GM cells were were subcutaneously implanted into 7 to 8-week-old female BALB/c SCID mice (Harlan Sprague Dawley, Inc., Indiana), 100μl of cell suspension mixed with an equal volume of matrigel (BD Bioscience). Each group consisted of 5 mice. Tumor growth was measured using a caliper and calculated from the formula: “V = L x W x H x π / 0.52”.

extract_protocol: Xenograft samples were placed in RNAlater (Ambion, USA) overnight before storage at -80oC. RNA was extracted using Tri-reagant (Sigma-Aldrich) and washed using the Qiagen Spin column (Qiagen). RNA quality and quantity were confirmed using the NanoDrop ND-1000 spectrophotometer and the Agilent 2100 bioanalyzer (Agilent Technologies).

treatment_protocol: When tumors reached the size of 0.35-0.45 cm3, the mice were treated by intraperitoneal injection (i.p.) of Bevacizumab (10mg/kg body weight), dibenzazepine (DBZ; Syncom Groningen, The Netherlands) (8.1mmol/kg) (Li et al., 2011) or phosphate buffered saline (PBS) as a control. After 3 days, a second dose of Bevacizumab or DBZ was given and, 4h later, the mice were sacrificed and the tumors were collected. Half of each tumor sample was freshly frozen in liquid nitrogen and subsequently used for RNA extraction.

tag: tissue

value: U87-EV human glioblastoma xenograft

tag: host

value: BALB/c SCID mouse

tag: treated with

value: dibenzazepine (DBZ) (8.1mmol/kg)


title: Microglia_Veh_AE1_rep1

description:
Veh_AE1_A
Affymetrix GeneChip Mouse Gene 1.0 ST Array


title: U87-EV human glioblastoma xenograft - dibenzazepine treated  - 1 [HG-U133_Plus_2]

description: tumor tissue includes mouse host stroma cells

hyb_protocol: Target cDNA generated from each sample was then processed as per manufacturer's recommendation using an Affymetrix GeneChip Instrument System (http://www.affymetrix.com/support/technical/manual/expression_manual.affx).   Briefly, spike controls were added to 10 µg fragmented cRNA before overnight hybridization to HGU133plus2 arrays. Arrays were then washed and stained with streptavidin-phycoerythrin, before imaging on an Affymetrix GeneChip (3000) scanner. A complete description of these procedures is available at http://bioinf.picr.man.ac.uk/mbcf/Downloads/GeneChip_Hyb_Wash_Scan_Protocol-CR-UK_v4.pdf.

data_processing: Following scanning, .DAT files were processed using Affymetrix GCOS, 1.1.1.052, to generate .CEL files. Subsequent data processing was performed on these data using the affy, simpleaffy and GCRMA packages from BioConductor and R. mRNA was estimated using GCRMA and log2 values were used.

source_name: dibenzazepine treated

tag: specific-host

tag: tissue type

value: U87-EV human glioblastoma xenograft tumour


title: Microglia_Veh_Con_rep1

description:
Veh_Con_A
Affymetrix GeneChip Mouse Gene 1.0 ST Array


title: 28hr GFP rep C

description: 30 pooled zebrafish embryos


title: U87-EV human glioblastoma xenograft - dibenzazepine treated  - 2 [HG-U133_Plus_2]


title: Plants overexpressing WRKY6, arsenate 30μM, 1.5 hours. Rep2

city: Cantoblanco

first: Juan

middle: Carlos

last: Oliveros

state: Madrid

address: Darwin 3

country: Spain

institute: CNB, CSIC

description: Plants overexpressing WRKY6 transcription factor supplemented with arsenate 30μM (1.5 hours). Replicate 2

hyb_protocol: Each microarray was hybridized with the Nimblegen Hybridization Kit, washed using the Nimblegen Wash Buffer Kit (both from Roche) and scanned at 2 μm double-pass at 16 bit of resolution.

scan_protocol: Scanned at 2 μm double-pass at 16 bit of resolution with the official Nimblegen scanner.

data_processing: Data were analyzed through Robust Multi-array Analysis (RMA) with Nimblegen Scan software (Roche).

organism: Arabidopsis thaliana

label_protocol: cDNA was Cy3-labeled with the Nimblegen One-Color DNA Labeling Kit (Roche).

growth_protocol: Plants were grown on Johnson medium with 1 mM Pi (7 days), transferred to -Pi medium (2 days).

extract_protocol: RNA was isolated from three independent biological samples for each condition using the RNeasy Plant Mini Kit (Qiagen). Each RNA preparation was tested for degradation using the Agilent 2100 Bioanalyzer (Agilent technologies, Palo Alto, CA).

treatment_protocol: Plants were transferred to liquid medium supplemented with 30 μM As(V), 30 μM Pi, 1mM Pi (or not supplemented) for indicated times.

tag: ecotype

tag: genotype

tag: supplement

value: Arsenate (30μM)

tag: time

value: 1.5 hours


title: U87-EV human glioblastoma xenograft - Control 3

source_name: U87-EV human glioblastoma xenograft_Control

value: phosphate buffered saline (PBS) as a control


title: U87-EV human glioblastoma xenograft - Control  - 2 [HG-U133_Plus_2]

source_name: Control


title: U87-EV human glioblastoma xenograft - Control  - 3 [HG-U133_Plus_2]


title: U87-EV human glioblastoma xenograft - Control 5


title: U87-EV human glioblastoma xenograft - dibenzazepine treated  - 3 [HG-U133_Plus_2]


title: Plants overexpressing WRKY6, arsenate 30μM, 1.5 hours. Rep3

description: Plants overexpressing WRKY6 transcription factor supplemented with arsenate 30μM (1.5 hours). Replicate 3


title: U87-EV human glioblastoma xenograft - Control 4


title: Microglia_Veh_Con_rep2

description:
Veh_Con_B
Affymetrix GeneChip Mouse Gene 1.0 ST Array

tag: strain/background

tag: aβ treatment


title: U87-EV human glioblastoma xenograft - Control 2


title: Microglia_Veh_AE1_rep2

description:
Veh_AE1_B
Affymetrix GeneChip Mouse Gene 1.0 ST Array

tag: ep4 agonist ae1-329 treatment

tag: treatment duration


title: Plants overexpressing WRKY6, arsenate 30μM, 1.5 hours. Rep1

description: Plants overexpressing WRKY6 transcription factor supplemented with arsenate 30μM (1.5 hours). Replicate 1


title: Microglia_Abeta_Con_rep3

description:
Abeta_Con_C
Affymetrix GeneChip Mouse Gene 1.0 ST Array

source_name: Primary microglia from P7 C57BL/6J mice, Aβ42 alone

tag: developmental stage

value: 10uM Aβ42 oligomeric


title: Microglia_Abeta_Con_rep2

description:
Abeta_Con_B
Affymetrix GeneChip Mouse Gene 1.0 ST Array


title: 28hr GFP rep A

description: 30 pooled zebrafish embryos

tag: treatment

tag: sampling time


title: U87-EV human glioblastoma xenograft - Control  - 1 [HG-U133_Plus_2]


title: Wild type, 30μM arsenate, 1.5 hours. Rep2

description: Wild type plants supplemented with 30μM arsenate (1.5 hours). Replicate 2

source_name: Wild type, 30μM arsenate, 1.5 hours

value: Wild Type


title: Microglia_Abeta_AE1_rep3

description:
Abeta_AE1_C
Affymetrix GeneChip Mouse Gene 1.0 ST Array

source_name: Primary microglia from P7 C57BL/6J mice, Aβ42 + AE1-329

tag: cell type


title: Wild type, 30μM arsenate, 1.5 hours. Rep3

description: Wild type plants supplemented with 30μM arsenate (1.5 hours). Replicate 3


title: U87-EV human glioblastoma xenograft - Control 1

tag: tissue


title: Wild type, 30μM arsenate, 1.5 hours. Rep1

description: Wild type plants supplemented with 30μM arsenate (1.5 hours). Replicate 1


title: U87-EV human glioblastoma xenograft - Bevacizumab treated  - 1

description: U87-EV human glioblastoma xenograft tumour

source_name: U87-EV human glioblastoma xenograft

growth_protocol: All protocols were carried out under Indiana University Institutional Animal Care and Use Committee (IACUC), and UK Home Office approved protocols and regulations. 107 U87 cells were implanted into 6- to 8-week-old female BALB/c SCID mice (Harlan Sprague Dawley, Inc.) subcutaneously (s.c.), as 100μL cell suspensions with an equal volume of Matrigel (BD Bioscience). Tumors were measured twice a week with a caliper, and volumes were calculated using the formula length x width2 x 0.5.

treatment_protocol: Once the tumor volume reached 150-200 mm3, mice were randomized into two groups with starting cohort sizes of 5 mice per group and treatment of Bevacizumab injected intraperitoneally (i.p.) every 3 days at a dose of 10 mg/kg or saline control begun. Treatment was continued until tumors grew to approximately 15-30 mm diameter.

tag: cell line

tag: condition

value: Bevacizumab treated


title: Wild type, control (not supplemented). Rep3

description: Wild type plants control (not supplemented). Replicate 3

source_name: Wild type, control (not supplemented)

value: not supplemented


title: Microglia_Abeta_AE1_rep2

description:
Abeta_AE1_B
Affymetrix GeneChip Mouse Gene 1.0 ST Array

value: postnatal day 7

value: microglia


title: Wild type, control (not supplemented). Rep2

description: Wild type plants control (not supplemented). Replicate 2


title: U87-EV human glioblastoma xenograft - Bevacizumab treated  - 3


title: U87-EV human glioblastoma xenograft - Bevacizumab treated  - 2


title: Keratinocytes grown in suspension

city: New York

first: Miroslav

last: Blumenberg

state: NY

address: 455 First Ave #874

department: Dermatology

institute: NYU School of Medicine

description:
Suspended keratinocytes
Tomo SUSP.48 U95Av2.CEL

hyb_protocol: Standard Affymetrix protocol

scan_protocol: Standard Affymetrix protocol

data_processing: MAS5 GCOS, and RMAExpress summarized using PLM and log2 transformed

label: Biotin

source_name: Epidermal keratinocytes

label_protocol: Standard Affymetrix protocol

growth_protocol: Standard e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642.

treatment_protocol: ~70% confluent keratinocytes attached and suspended cultures grown for the same amount of time.

value: primary epidermal keratinocytes

tag: growth condition

value: suspended in bacteriological plates


title: Microglia_Abeta_Con_rep1

description:
Abeta_Con_A
Affymetrix GeneChip Mouse Gene 1.0 ST Array


title: Keratinocytes

description:
Attached keratinocytes
Tomo SUSP. cont 48 U95Av2.CEL

extract_protocol: Standard e.g. as in Banno et al., J Biol Chem 279(31): 32633-32642.

value: attached in tissue culture plates


title: Diabetic WT mouse rep3

city: Roma

first: Ivan

last: Arisi

address: viale Regina Elena 295

department: Bioinformatics Facility

country: Italy

institute: European Brain Research Institute

description: gene expression data from diabetic WT kidney

hyb_protocol: Labeled cRNA were hybridized was on GeneChip Mouse Genome 430 2.0 Array. FS450_0001 protocol is used for staining and washing the GeneChips.

scan_protocol: Hybridized chips were read on a model M10 scanner.

data_processing: Data were analyzed using Expression Console and normalized by the RMA algorithm.

source_name: mouse kidney_diabetic

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol for gene expression.

extract_protocol: Kidneys were removed from anesthetized mice. Trizol extraction of total RNA was performed according to the manufacturer's instructions.

treatment_protocol: Mice were starved for five hours and then injected intraperitoneally with 50 mg/kg of STZ (SIGMA, St.Louis, MO) for five consecutive days. Blood glucose levels were monitored at baseline and then once a week for 12 weeks to follow the development of hyperglycemia. Mice were considered diabetic with a blood glucose level above 250 mg/dl.

value: kidney

tag: gender

value: male


title: U87-EV human glioblastoma xenograft - Control  - 2

value: Control


title: Diabetic Timp3-/- mouse rep1

description: gene expression data from diabetic T3-/- kidney


title: U87-EV human glioblastoma xenograft - Control  - 3


title: Diabetic Timp3-/- mouse rep2


title: Diabetic WT mouse rep2


title: U87-EV human glioblastoma xenograft - Control  - 1


title: Diabetic WT mouse rep 1


title: Diabetic Timp3-/- mouse rep3


title: Microglia_Abeta_AE1_rep1

description:
Abeta_AE1_A
Affymetrix GeneChip Mouse Gene 1.0 ST Array


title: Wild type, control (not supplemented). Rep1

description: Wild type plants control (not supplemented). Replicate 1

tag: ecotype


title: Animal 6; p54 [Day 28]

status: Public on Apr 24 2014

city: Boston

first: Hsun-Hsien

last: Chang

state: MA

address: 300 Longwood Ave

department: Children's Hospital Informatics Department

institute: Harvard Medical School

description:
Animal 6 p54
plasma viral RNA
Sample 85

hyb_protocol: Standard Illumina hybridization protocol

data_processing: The data were normalized using qualtile normalization with Bioinformatics Toolbox in Matlab

organism: Macaca mulatta

source_name: peripheral blood

label_protocol: RNA was labeled following standard Illumina protocol

extract_protocol: RNA was extracted following standard Illumina protocol

tag: animal id

value: Day 28


title: Animal 6; p54 [Day 35]

description:
Animal 6 p54
plasma viral RNA
Sample 86

scan_protocol: Standard Illumina hybridization protocol

value: Day 35


title: Animal 6; p54 [Day 56]

description:
Animal 6 p54
plasma viral RNA
Sample 88

value: Day 56


title: Animal 6; p54 [Day 210]

description:
Animal 6 p54
plasma viral RNA
Sample 90

value: Day 210


title: Animal 6; p11c [Day 56]

description:
Animal 6 p11c
plasma viral RNA
Sample 80


title: Animal 6; p11c [Day 210]

description:
Animal 6 p11c
plasma viral RNA
Sample 82


title: Animal 6; p54 [Day 42]

description:
Animal 6 p54
plasma viral RNA
Sample 87

value: Day 42


title: Animal 6; p11c [Day 70]

description:
Animal 6 p11c
plasma viral RNA
Sample 81

value: Day 70


title: Animal 5; p54 [Day 28]

description:
Animal 5 p54
plasma viral RNA
Sample 69


title: Animal 6; p11c [Day 35]

description:
Animal 6 p11c
plasma viral RNA
Sample 78


title: Animal 6; p11c [Day 21]

description:
Animal 6 p11c
plasma viral RNA
Sample 76

value: Day 21


title: Animal 5; p11c [Day 56]

description:
Animal 5 p11c
plasma viral RNA
Sample 64


title: Animal 6; p54 [Day 70]

description:
Animal 6 p54
plasma viral RNA
Sample 89


title: Animal 5; p54 [Day 21]

description:
Animal 5 p54
plasma viral RNA
Sample 68


title: Animal 6; p54 [Day 14]

description:
Animal 6 p54
plasma viral RNA
Sample 83

value: Day 14


title: Animal 6; p54 [Day 21]

description:
Animal 6 p54
plasma viral RNA
Sample 84


title: Animal 6; p11c [Day 14]

description:
Animal 6 p11c
plasma viral RNA
Sample 75


title: Animal 5; p11c [Day 70]

description:
Animal 5 p11c
plasma viral RNA
Sample 65


title: Animal 5; p54 [Day 42]

description:
Animal 5 p54
plasma viral RNA
Sample 71


title: Animal 5; p54 [Day 210]

description:
Animal 5 p54
plasma viral RNA
Sample 74


title: Animal 5; p54 [Day 14]

description:
Animal 5 p54
plasma viral RNA
Sample 67


title: Animal 6; p11c [Day 42]

description:
Animal 6 p11c
plasma viral RNA
Sample 79


title: Animal 5; p11c [Day 28]

description:
Animal 5 p11c
plasma viral RNA
Sample 61


title: Animal 6; p11c [Day 28]

description:
Animal 6 p11c
plasma viral RNA
Sample 77


title: Animal 5; p11c [Day 210]

description:
Animal 5 p11c
plasma viral RNA
Sample 66


title: Animal 5; p54 [Day 56]

description:
Animal 5 p54
plasma viral RNA
Sample 72


title: Animal 5; p54 [Day 70]

description:
Animal 5 p54
plasma viral RNA
Sample 73


title: Animal 5; p11c [Day 42]

description:
Animal 5 p11c
plasma viral RNA
Sample 63


title: Animal 5; p54 [Day 35]

description:
Animal 5 p54
plasma viral RNA
Sample 70


title: Animal 5; p11c [Day 35]

description:
Animal 5 p11c
plasma viral RNA
Sample 62


title: Animal 4; p54 [Day 28]

description:
Animal 4 p54
plasma viral RNA
Sample 53


title: Animal 4; p54 [Day 42]

description:
Animal 4 p54
plasma viral RNA
Sample 55


title: Animal 4; p11c [Day 21]

description:
Animal 4 p11c
plasma viral RNA
Sample 45


title: Animal 3; p54 [Day 70]

description:
Animal 3 p54
plasma viral RNA
Sample 42


title: Animal 3; p11c [Day 56]

description:
Animal 3 p11c
plasma viral RNA
Sample 35


title: Animal 4; p54 [Day 56]

description:
Animal 4 p54
plasma viral RNA
Sample 56


title: Animal 4; p54 [Day 210]

description:
Animal 4 p54
plasma viral RNA
Sample 58


title: Animal 4; p11c [Day 56]

description:
Animal 4 p11c
plasma viral RNA
Sample 49


title: Animal 5; p11c [Day 21]

description:
Animal 5 p11c
plasma viral RNA
Sample 60


title: Animal 3; p54 [Day 14]

description:
Animal 3 p54
plasma viral RNA
Sample 38


title: Animal 4; p54 [Day 70]

description:
Animal 4 p54
plasma viral RNA
Sample 57


title: Animal 4; p11c [Day 35]

description:
Animal 4 p11c
plasma viral RNA
Sample 47


title: Animal 3; p54 [Day 21]

description:
Animal 3 p54
plasma viral RNA
Sample 39


title: Animal 4; p11c [Day 42]

description:
Animal 4 p11c
plasma viral RNA
Sample 48


title: Animal 5; p11c [Day 14]

description:
Animal 5 p11c
plasma viral RNA
Sample 59


title: Animal 4; p54 [Day 14]

description:
Animal 4 p54
plasma viral RNA
Sample 51


title: Animal 3; p11c [Day 210]

description:
Animal 3 p11c
plasma viral RNA
Sample 37


title: Animal 3; p54 [Day 210]

description:
Animal 3 p54
plasma viral RNA
Sample 43


title: Animal 3; p54 [Day 28]

description:
Animal 3 p54
plasma viral RNA
Sample 40


title: Animal 4; p11c [Day 14]

description:
Animal 4 p11c
plasma viral RNA
Sample 44


title: Animal 4; p11c [Day 28]

description:
Animal 4 p11c
plasma viral RNA
Sample 46


title: Animal 4; p11c [Day 70]

description:
Animal 4 p11c
plasma viral RNA
Sample 50


title: Animal 4; p54 [Day 21]

description:
Animal 4 p54
plasma viral RNA
Sample 52


title: Animal 3; p11c [Day 28]

description:
Animal 3 p11c
plasma viral RNA
Sample 32


title: Animal 3; p54 [Day 56]

description:
Animal 3 p54
plasma viral RNA
Sample 41


title: Animal 3; p11c [Day 42]

description:
Animal 3 p11c
plasma viral RNA
Sample 34


title: Animal 3; p11c [Day 70]

description:
Animal 3 p11c
plasma viral RNA
Sample 36


title: Animal 3; p11c [Day 35]

description:
Animal 3 p11c
plasma viral RNA
Sample 33


title: Animal 4; p54 [Day 35]

description:
Animal 4 p54
plasma viral RNA
Sample 54


title: Animal 3; p11c [Day 21]

description:
Animal 3 p11c
plasma viral RNA
Sample 31


title: Animal 2; p54 [Day 56]

description:
Animal 2 p54
plasma viral RNA
Sample 27


title: Animal 2; p54 [Day 70]

description:
Animal 2 p54
plasma viral RNA
Sample 28


title: Animal 3; p11c [Day 14]

description:
Animal 3 p11c
plasma viral RNA
Sample 30


title: Animal 1; p54 [Day 210]

description:
Animal 1 p54
plasma viral RNA
Sample 16


title: Animal 1; p11c [Day 42]

description:
Animal 1 p11c
plasma viral RNA
Sample 5


title: Animal 2; p11c [Day 35]

description:
Animal 2 p11c
plasma viral RNA
Sample 19


title: Animal 1; p54 [Day 14]

description:
Animal 1 p54
plasma viral RNA
Sample 9


title: Animal 2; p54 [Day 210]

description:
Animal 2 p54
plasma viral RNA
Sample 29


title: Animal 1; p54 [Day 35]

description:
Animal 1 p54
plasma viral RNA
Sample 12


title: Animal 1; p54 [Day 70]

description:
Animal 1 p54
plasma viral RNA
Sample 15


title: Animal 2; p11c [Day 210]

description:
Animal 2 p11c
plasma viral RNA
Sample 23


title: Animal 2; p54 [Day 14]

description:
Animal 2 p54
plasma viral RNA
Sample 24


title: Animal 1; p11c [Day 28]

description:
Animal 1 p11c
plasma viral RNA
Sample 3


title: Animal 2; p11c [Day 70]

description:
Animal 2 p11c
plasma viral RNA
Sample 22


title: Animal 1; p54 [Day 21]

description:
Animal 1 p54
plasma viral RNA
Sample 10


title: Animal 2; p54 [Day 21]

description:
Animal 2 p54
plasma viral RNA
Sample 25


title: Animal 1; p54 [Day 42]

description:
Animal 1 p54
plasma viral RNA
Sample 13


title: Animal 1; p54 [Day 28]

description:
Animal 1 p54
plasma viral RNA
Sample 11


title: Animal 1; p11c [Day 56]

description:
Animal 1 p11c
plasma viral RNA
Sample 6


title: Animal 2; p11c [Day 56]

description:
Animal 2 p11c
plasma viral RNA
Sample 21


title: Animal 2; p11c [Day 14]

description:
Animal 2 p11c
plasma viral RNA
Sample 17


title: Animal 1; p11c [Day 210]

description:
Animal 1 p11c
plasma viral RNA
Sample 8


title: Animal 2; p11c [Day 42]

description:
Animal 2 p11c
plasma viral RNA
Sample 20


title: Animal 1; p54 [Day 56]

description:
Animal 1 p54
plasma viral RNA
Sample 14


title: Animal 2; p54 [Day 28]

description:
Animal 2 p54
plasma viral RNA
Sample 26


title: Animal 1; p11c [Day 14]

description:
Animal 1 p11c
plasma viral RNA
Sample 1


title: Animal 2; p11c [Day 21]

description:
Animal 2 p11c
plasma viral RNA
Sample 18


title: Animal 1; p11c [Day 70]

description:
Animal 1 p11c
plasma viral RNA
Sample 7


title: Animal 1; p11c [Day 21]

description:
Animal 1 p11c
plasma viral RNA
Sample 2


title: ARDS lung Techincal Replicate 5

city: Stillwater

first: CHAOQUN

last: HUANG

state: OK

address: 264 McElroy Hall

department: Physiological Sciences

institute: Oklahoma State University

description:
Replicate 5 of 7. ARDS-CON.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively

hyb_protocol: The two-step microarray hybridization was carried out with the 3DNA 50 Expression kit (Genisphere Inc., Hatfield, PA)

scan_protocol: The hybridized slides were scanned with ScanArray Express

data_processing: Raw data were extracted from the DNA microarray hybridization images with GenePix Pro 5. Spot image visualization, spot quality evaluation, data normalization, and SAM test for the identification of the differentially expressed genes were performed using the RealSpot software.

organism: Rattus norvegicus

source_name: Control lung tissues

label_protocol: 3DNA 50 labeling kit

extract_protocol: Total RNA extracted using Tri reagent following manufacturer's instructions

value: Whole lung

tag: strain

value: Sprague Dawley

source_name: ARDS lung tissues


title: ARDS lung Techincal Replicate 6

description:
Replicate 6 of 7. ARDS-CON.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: ARDS lung Biological Replicate 2

description:
Replicate 2 of 7. ARDS-CON.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: CON lung Biological Replicate 4

description:
Replicate 4 of 5. CON-ARDS.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: CON lung Techincal Replicate 5

description:
Replicate 5 of 5. CON-ARDS.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: ARDS lung Biological Replicate 4

description:
Replicate 4 of 7. ARDS-CON.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: ARDS lung Techincal Replicate 7

description:
Replicate 7 of 7. ARDS-CON.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: ARDS lung Biological Replicate 3

description:
Replicate 3 of 7. ARDS-CON.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: CON lung Biological Replicate 2

description:
Replicate 2 of 5. CON-ARDS.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: CON lung Biological Replicate 3

description:
Replicate 3 of 5. CON-ARDS.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: OB_Veh_rep1

city: Madison

first: Mark

middle: B

last: Meyer

state: WI

address: 1415 Linden Dr.

department: Nutritional Sciences

institute: University of Wisconsin-Madison

hyb_protocol: Hybridization was performed by NimbleGen Systems Inc., Madison, WI, USA following their standard operating protocol. See www.nimblegen.com.

scan_protocol: Scanning was performed by NimbleGen Systems Inc., Madison, WI USA, following their standard operating protocol. See www.nimblegen.com.

data_processing: The raw data (.pair file) was subjected to RMA (Robust Multi-Array Analysis; Irizarry et al. Biostatistics 4(2):249), quantile normalization (Bolstad et al. Bioinformatics 19(2):185), and background correction as implemented in the NimbleScan software package, version 2.4.27 (Roche NimbleGen, Inc.).

source_name: MC3T3-E1 cells differentiated for 15 days

label_protocol: Labeling was performed using the NimbleGen Systems Inc., Madison, WI USA, standard operating protocol. See www.nimblegen.com.

growth_protocol: MC3T3-E1 cells were cultured in alpha MEM with 10% heat-inactivated fetal bovine serum from Hyclone (Logan, UT) and 1% penicillin-streptomycin.  Differentiated cells were cultured in complete media plus 10mM glycerol-2-phosphate and 50ug/mL ascorbic acid for 15 days, changing media every 2-3 days.

extract_protocol: RNA was isolated using the TRI-Reagent protocol (MRC, Cincinnati, OH) and amplification methods according Roche NimbleGen protocols.

treatment_protocol: Cells were treated with 100nM 1,25(OH)2D3 or ethanol vehicle for 24 hours.

tag: passage

value: ethanol vehicle


title: POB_Veh_rep1

source_name: MC3T3-E1 cells

value: MC3T3-E1 cells


title: CON lung Biological Replicate 1

description:
Replicate 1 of 5. CON-ARDS.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: ARDS lung Biological Replicate 1

description:
Replicate 1 of 7. ARDS-CON.
F5 and F3 correspond to Cy5 and Cy3 channels, respectively


title: POB_Veh_rep3


title: OB_Veh_rep3

value: MC3T3-E1 cells differentiated for 15 days


title: OB_Veh_rep2


title: 23 h

first: Nikolai

last: Slavov

address: 360 Huntington Avenue

institute: Northeastern University

hyb_protocol: Oligoarray control targets and hybridization buffer (Agilent In Situ Hybridization Kit Plus) were added, and samples were applied to microarrays enclosed in Agilent SureHyb-enabled hybridization chambers. After hybridization, slides were washed sequential

scan_protocol: Scanned on an Agilent G2565AA scanner. Images were quantified using Agilent Feature Extraction Software

data_processing: Agilent Feature Extraction Software was used for background subtraction and LOWESS normalization.

organism: Saccharomyces cerevisiae

source_name: exponentially growing yeast cells

label_protocol: 10 µg of total RNA were primed with 2 µl of 100 µM T16N2 DNA primer at 70°C for 10 min, then reversed transcribed at 42°C for 1 h in the presence of 400 U SuperScript II RTase (Invitrogen), and 100 µM each dATP, dTTP, dGTP, with 25 µM dCTP, 25 µM Cy3-label

growth_protocol: Yeast cells were grown in minimal medium in batch culture

extract_protocol: Total RNA extracted using phenol chlorofrom extraction

tag: time

source_name: yeast cells_aged64h

tag: age

value: yeast cells


title: 22 h


title: 17 h


title: 19 h


title: 20 h


title: 21 h


title: POB_Veh_rep2


title: 24 h


title: [hs1991] zwf1-del-1-a

city: Utrecht

first: Patrick

last: Kemmeren

state: Utrecht

address: Universiteitsweg 100

department: Department of Molecular Cancer Research

country: Netherlands

institute: UMC Utrecht

hyb_protocol: Tecan HS4800 hybridization

scan_protocol: scanning of slides using Agilent G256BA Imagene feature extraction

data_processing:
genes, no bg corr, dye corr
limma

source_name: refpool

label_protocol: robot amplification and labeling v1.0

growth_protocol: yeast-deleteome[grow]

extract_protocol: yeast RNA isolation for robotic amplification v1.0

tag: genotype/variation

value: refpool

growth_protocol: Yeast growth for expression profiling in Tecan platereader v1.0

extract_protocol: yeast HTP RNA isolation for robot v2.0


title: 16 h


title: [hs1991] zap1-del-3-b


title: [hs1991] zwf1-del-1-b


title: [hs1991] zap1-del-3-a


title: [hs1991] ypr153w-del-1-b


title: [hs1991] yta7-del-1-a


title: [hs1991] ypt7-del-2-b


title: [hs1991] ypt6-del-1-b


title: [hs1991] yor338w-del-1-b


title: [hs1991] ypr153w-del-1-a


title: [hs1991] yta7-del-1-b


title: [hs1991] ypt6-del-2-a


title: [hs1991] yol138c-del-2-b


title: [hs1991] ypl199c-del-1-a


title: [hs1991] ynl213c-del-1-b


title: [hs1991] ynr004w-del-1-d


title: [hs1991] ymr293c-del-2-b


title: [hs1991] ynl213c-del-1-a


title: [hs1991] ypt7-del-1-a


title: [hs1991] ylr352w-del-1-b


title: [hs1991] ynr004w-del-1-a


title: [hs1991] yol138c-del-2-a


title: [hs1991] ylr278c-del-1-b


title: [hs1991] ylh47-del-1-b


title: [hs1991] ykr023w-del-1-b


title: [hs1991] ylh47-del-1-a


title: Animal 1; p11c [Day 35]

description:
Animal 1 p11c
plasma viral RNA
Sample 4


title: [hs1991] yjl206c-del-1-a


title: [hs1991] ymr031c-del-1-b


title: [hs1991] ymr293c-del-1-a


title: [hs1991] yil001w-del-1-b


title: [hs1991] ylr352w-del-1-a


title: [hs1991] ylr278c-del-1-a


title: [hs1991] yjl206c-del-1-b


title: [hs1991] yil014c-a-del-1-b


title: [hs1991] yil014c-a-del-1-a


title: [hs1991] yhr033w-del-2-b


title: [hs1991] yhr033w-del-2-a


title: [hs1991] yhr003c-del-2-b


title: [hs1991] yhr003c-del-2-a


title: [hs1991] yhl010c-del-1-b

hyb_protocol: Hybridization protocol v2.2

label_protocol: aminoallyl labeling v2.1.1

extract_protocol: yeast mRNA extraction v1.3


title: [hs1991] ygr122w-del-2-b


title: [hs1991] ygr071c-del-1-b


title: [hs1991] ydr306c-del-1-b


title: [hs1991] yer064c-del-1-a


title: [hs1991] ydr266c-del-2-b


title: [hs1991] ygr071c-del-1-a


title: [hs1991] yer064c-del-1-b


title: [hs1991] ydr306c-del-1-a


title: [hs1991] ybr028c-del-3-a


title: [hs1991] ybr285w-del-2-a


title: [hs1991] yhl010c-del-1-a


title: [hs1991] ybr285w-del-1-b


title: [hs1991] ybp2-del-2-a


title: [hs1991] vps9-del-1-b


title: [hs1991] vps8-del-3-b


title: [hs1991] ygr122w-del-2-a


title: [hs1991] ydr266c-del-2-a


title: [hs1991] ybr028c-del-3-b


title: [hs1991] vps9-del-1-a


title: [hs1991] wss1-del-1-a


title: [hs1991] ybp2-del-1-b


title: [hs1991] yap1-del-2-b


title: [hs1991] wss1-del-1-b


title: [hs1991] yap1-del-2-a


title: [hs1991] vps41-del-1-a


title: [hs1991] vps41-del-1-b


title: [hs1991] vps28-del-1-b


title: [hs1991] vps4-del-1-a


title: [hs1991] vps4-del-1-b


title: [hs1991] vps28-del-1-a


title: [hs1991] vps27-del-1-a


title: [hs1991] vps36-del-1-a


title: [hs1991] vps25-del-2-b


title: [hs1991] vps3-del-1-b


title: [hs1991] vps16-del-1-b


title: [hs1991] vps3-del-1-a


title: [hs1991] vid28-del-1-b


title: [hs1991] vps36-del-1-b


title: [hs1991] vps24-del-1-a


title: [hs1991] vps16-del-1-a


title: [hs1991] vid28-del-1-a


title: [hs1991] vps1-del-2-a


title: [hs1991] vps25-del-1-a


title: [hs1991] vps8-del-3-a


title: [hs1991] vhr1-del-2-b


title: [hs1991] vps24-del-1-b


title: [hs1991] vps27-del-1-b


title: [hs1991] vhr1-del-1-a


title: [hs1991] vam6-del-1-a


title: [hs1991] vam6-del-1-b


title: [hs1991] vps1-del-2-b


title: [hs1991] vam3-del-1-b


title: [hs1991] vac8-del-1-b


title: [hs1991] vam3-del-1-a


title: [hs1991] utp30-del-2-a


title: [hs1991] usa1-del-1-b


title: [hs1991] urn1-del-1-d


title: [hs1991] utp30-del-2-b


title: [hs1991] ure2-del-2-b


title: [hs1991] ykr023w-del-1-a


title: [hs1991] ure2-del-2-a


title: [hs1991] urc2-del-3-a


title: [hs1991] usa1-del-1-a


title: [hs1991] ura7-del-1-b


title: [hs1991] urn1-del-1-c


title: [hs1991] urm1-del-2-b


title: [hs1991] ubx2-del-1-b


title: [hs1991] upf3-del-1-b


title: [hs1991] ubx3-del-1-b


title: [hs1991] ufd2-del-1-a


title: [hs1991] urc2-del-3-b


title: [hs1991] ufd4-del-1-a


title: [hs1991] ura7-del-1-a


title: [hs1991] urm1-del-2-a


title: [hs1991] ubx2-del-1-a


title: [hs1991] upf3-del-1-a


title: [hs1991] ubr1-del-1-b


title: [hs1991] ufd4-del-1-b


title: [hs1991] ubr2-del-3-b


title: [hs1991] ubr2-del-3-a


title: [hs1991] ufd2-del-1-b


title: [hs1991] ubp6-del-2-b


title: [hs1991] ubp3-del-1-b


title: [hs1991] ubr1-del-1-a


title: [hs1991] ubp6-del-2-a


title: [hs1991] ubx3-del-1-a


title: [hs1991] ubp14-del-2-b


title: [hs1991] ubp15-del-1-b


title: [hs1991] ubp16-del-1-b


title: [hs1991] ubp3-del-1-a


title: [hs1991] ubp1-del-1-b


title: [hs1991] ubp10-del-1-b


title: [hs1991] ubp14-del-2-a


title: [hs1991] ubp13-del-2-a


title: [hs1991] ubp10-del-1-a


title: [hs1991] ubc8-del-1-b


title: [hs1991] ubc7-del-5-a


title: [hs1991] uba4-del-2-a


title: [hs1991] ubp13-del-2-b


title: [hs1991] tub3-del-1-b


title: [hs1991] ubp15-del-1-a


title: [hs1991] ubc6-del-1-a


title: [hs1991] ubc8-del-1-a


title: [hs1991] ubp16-del-1-a


title: [hs1991] ubc7-del-4-b


title: [hs1991] uba3-del-3-a


title: [hs1991] uba4-del-2-b


title: [hs1991] uaf30-del-1-d


title: [hs1991] ubp1-del-1-a


title: [hs1991] uaf30-del-1-a


title: [hs1991] ubc4-del-3-b


title: [hs1991] uba3-del-3-b


title: [hs1991] ubc4-del-3-a


title: [hs1991] tsr2-del-1-a


title: [hs1991] trm10-del-1-a


title: [hs1991] trm1-del-1-b


title: [hs1991] trm10-del-2-b


title: [hs1991] trx2-del-1-a


title: [hs1991] vac8-del-1-a


title: [hs1991] tub3-del-1-a


title: [hs1991] tsr2-del-1-b


title: [hs1991] tlc1-del-1-b


title: [hs1991] trx2-del-1-b


title: [hs1991] tma22-del-1-b


title: [hs1991] tom1-del-1-a


title: [hs1991] tif4631-del-1-b


title: [hs1991] trm1-del-1-a


title: [hs1991] top3-del-1-b


title: [hs1991] ubc6-del-1-b


title: [hs1991] tip41-del-1-a


title: [hs1991] thr4-del-1-a


title: [hs1991] tma23-del-1-b


title: [hs1991] tma23-del-1-a


title: [hs1991] tif2-del-1-a


title: [hs1991] tif4631-del-1-a


title: [hs1991] thr4-del-1-b


title: [hs1991] tom1-del-1-b


title: [hs1991] tlc1-del-1-a


title: [hs1991] thp2-del-1-b


title: [hs1991] thr1-del-1-b


title: [hs1991] thr1-del-1-a


title: [hs1991] tgs1-del-1-a


title: [hs1991] thp1-del-2-a


title: [hs1991] thp1-del-2-b


title: [hs1991] tec1-del-1-a


title: [hs1991] thp2-del-1-a


title: [hs1991] swt21-del-1-b


title: [hs1991] sxm1-del-1-a


title: [hs1991] tgs1-del-1-b


title: [hs1991] sxm1-del-1-b


title: [hs1991] tfb5-del-3-a


title: [hs1991] tfb5-del-3-b


title: [hs1991] swi5-del-1-c


title: [hs1991] syc1-del-1-b


title: [hs1991] swi6-del-3-b


title: [hs1991] tec1-del-1-b


title: [hs1991] swt21-del-1-a


title: [hs1991] swm1-del-1-a


title: [hs1991] swi6-del-3-a


title: [hs1991] swi5-del-2-b


title: [hs1991] syc1-del-1-a


title: [hs1991] swa2-del-4-b


title: [hs1991] swi4-del-1-b


title: [hs1991] swm1-del-1-b


title: [hs1991] swa2-del-4-a


title: [hs1991] sub1-del-1-b


title: [hs1991] stp1-del-2-a


title: [hs1991] stp3-del-1-b


title: [hs1991] stm1-del-1-b


title: [hs1991] stp2-del-2-a


title: [hs1991] stp2-del-2-b


title: [hs1991] sub1-del-1-a


title: [hs1991] ste12-del-2-a


title: [hs1991] stb5-del-1-b


title: [hs1991] stm1-del-1-a


title: [hs1991] swi4-del-1-a


title: [hs1991] ste50-del-1-b


title: [hs1991] stb4-del-1-b


title: [hs1991] stp1-del-2-b


title: [hs1991] stb5-del-1-a


title: [hs1991] stp3-del-1-a


title: [hs1991] ste5-del-2-b


title: [hs1991] ste50-del-2-a


title: [hs1991] ste5-del-2-a


title: [hs1991] ssf1-del-3-b


title: [hs1991] ssk1-del-1-b


title: [hs1991] ste12-del-1-b


title: [hs1991] top3-del-2-a


title: [hs1991] ssm4-del-2-b


title: [hs1991] ssk1-del-1-a


title: [hs1991] ssm4-del-2-a


title: [hs1991] ssf1-del-3-a


title: [hs1991] srp40-del-1-b


title: [hs1991] srp40-del-1-a


title: [hs1991] tma22-del-1-a


title: [hs1991] spt4-del-1-a


title: [hs1991] spt4-del-1-b


title: [hs1991] sro9-del-1-b


title: [hs1991] srn2-del-1-b


title: [hs1991] spt23-del-1-b


title: [hs1991] slx8-del-2-b


title: [hs1991] srn2-del-1-a


title: [hs1991] stb4-del-1-a


title: [hs1991] spt21-del-1-b


title: [hs1991] spt21-del-1-a


title: [hs1991] smi1-del-1-b


title: [hs1991] spo7-del-2-b


title: [hs1991] spt2-del-3-b


title: [hs1991] tip41-del-2-b


title: [hs1991] snf7-del-1-a


title: [hs1991] spt2-del-3-a


title: [hs1991] spo7-del-2-a


title: [hs1991] snf8-del-1-a


title: [hs1991] snt309-del-2-a


title: [hs1991] smi1-del-1-a


title: [hs1991] snf8-del-1-b


title: [hs1991] snf7-del-1-b


title: [hs1991] slx9-del-3-a


title: [hs1991] spt23-del-1-a


title: [hs1991] snt309-del-1-b


title: [hs1991] slx9-del-3-b


title: [hs1991] slx8-del-2-a


title: [hs1991] slx5-del-1-b


title: [hs1991] sla1-del-1-b


title: [hs1991] skn7-del-1-b


title: [hs1991] sla1-del-1-a


title: [hs1991] sro9-del-2-a


title: [hs1991] sko1-del-1-b


title: [hs1991] sko1-del-1-a


title: [hs1991] skn7-del-1-a


title: [hs1991] slx5-del-1-a


title: [hs1991] ski3-del-1-b


title: [hs1991] ski3-del-1-a


title: [hs1991] sis2-del-1-b


title: [hs1991] sfp1-del-1-a


title: [hs1991] sgs1-del-1-a


title: [hs1991] sgs1-del-1-b


title: [hs1991] set5-del-1-a


title: [hs1991] ser2-del-1-b


title: [hs1991] sfp1-del-1-b


title: [hs1991] ser2-del-1-a


title: [hs1991] seh1-del-2-b


title: [hs1991] sem1-del-1-b


title: [hs1991] set4-del-1-b


title: [hs1991] set4-del-2-a


title: [hs1991] seh1-del-2-a


title: [hs1991] scs2-del-1-b


title: [hs1991] sbp1-del-1-b


title: [hs1991] sap190-del-1-a


title: [hs1991] sem1-del-1-a


title: [hs1991] sbp1-del-1-a


title: [hs1991] scp160-del-3-a


title: [hs1991] sap155-del-2-b


title: [hs1991] sap190-del-1-b


title: [hs1991] san1-del-1-b


title: [hs1991] sam4-del-1-a


title: [hs1991] scs2-del-1-a


title: [hs1991] sap155-del-2-a


title: [hs1991] san1-del-1-a


title: [hs1991] sam3-del-1-d


title: [hs1991] sam1-del-3-a


title: [hs1991] rtt107-del-2-a


title: [hs1991] sam1-del-3-b


title: [hs1991] sae2-del-1-a


title: [hs1991] sam4-del-1-b


title: [hs1991] sac1-del-2-a


title: [hs1991] sac3-del-1-a


title: [hs1991] rtt103-del-1-b


title: [hs1991] sac3-del-1-b


title: [hs1991] rtt107-del-1-b


title: [hs1991] sam3-del-1-e


title: [hs1991] rtt103-del-1-a


title: [hs1991] rtr1-del-1-a


title: [hs1991] sac1-del-2-b


title: [hs1991] rts1-del-2-b


title: [hs1991] rts1-del-2-a


title: [hs1991] rtg3-del-1-a


title: [hs1991] rtg1-del-1-b


title: [hs1991] rtg1-del-1-a


title: [hs1991] rrp8-del-1-b


title: [hs1991] rrp6-del-1-b


title: [hs1991] rsa1-del-1-b


title: [hs1991] rtr1-del-2-b


title: [hs1991] rtg3-del-1-b


title: [hs1991] rsa1-del-1-a


title: [hs1991] rrp6-del-1-a


title: [hs1991] rrd1-del-1-a


title: [hs1991] rrm3-del-2-a


title: [hs1991] rrd1-del-1-d


title: [hs1991] rps0b-del-1-a


title: [hs1991] rrp8-del-1-a


title: [hs1991] rps0b-del-1-b


title: [hs1991] rpn4-del-3-b


title: [hs1991] rpn10-del-1-b


title: [hs1991] rpn13-del-4-a


title: [hs1991] rpn4-del-4-a


title: [hs1991] rrm3-del-1-b


title: [hs1991] rps21a-del-1-a


title: [hs1991] rpl16a-del-1-b


title: [hs1991] rps21a-del-1-b


title: [hs1991] rpn13-del-4-b


title: [hs1991] rpb9-del-2-b


title: [hs1991] rpl16a-del-1-a


title: [hs1991] rpa49-del-1-b


title: [hs1991] rpn10-del-1-a


title: [hs1991] rpa14-del-1-d


title: [hs1991] rpa14-del-1-a


title: [hs1991] rpa12-del-1-a


title: [hs1991] rox1-del-1-b


title: [hs1991] rny1-del-2-b


title: [hs1991] rpa12-del-1-b


title: [hs1991] rpa49-del-2-a


title: [hs1991] rnr4-del-1-b


title: [hs1991] rpb9-del-2-a


title: [hs1991] rme1-del-1-b


title: [hs1991] ris1-del-2-b


title: [hs1991] rmi1-del-2-a


title: [hs1991] rim101-del-2-b


title: [hs1991] rnr4-del-1-a


title: [hs1991] sis2-del-1-a


title: [hs1991] rme1-del-1-a


title: [hs1991] rny1-del-1-a


title: [hs1991] rim1-del-1-b


title: [hs1991] rox1-del-1-a


title: [hs1991] rim101-del-2-a


title: [hs1991] rim1-del-1-a


title: [hs1991] ric1-del-1-b


title: [hs1991] rif1-del-1-b


title: [hs1991] rif1-del-1-a


title: [hs1991] rfx1-del-1-b


title: [hs1991] rev3-del-1-b


title: [hs1991] rcy1-del-2-b


title: [hs1991] rmi1-del-2-b


title: [hs1991] rgp1-del-1-b


title: [hs1991] ric1-del-1-a


title: [hs1991] rgp1-del-1-a


title: [hs1991] rcm1-del-1-b


title: [hs1991] rcm1-del-1-a


title: [hs1991] rev3-del-1-a


title: [hs1991] rcy1-del-2-a


title: [hs1991] rai1-del-2-b


title: [hs1991] rai1-del-2-a


title: [hs1991] rfx1-del-1-a


title: [hs1991] rad54-del-1-b


title: [hs1991] rad57-del-1-b


title: [hs1991] ris1-del-2-a


title: [hs1991] rad54-del-1-a


title: [hs1991] rad50-del-2-a


title: [hs1991] rad55-del-1-a


title: [hs1991] rad52-del-1-a


title: [hs1991] rad55-del-1-b


title: [hs1991] rad5-del-2-b


title: [hs1991] rad50-del-1-b


title: [hs1991] rad57-del-1-a


title: [hs1991] rad52-del-1-b


title: [hs1991] rad27-del-1-b


title: [hs1991] rad27-del-1-a


title: [hs1991] rad28-del-1-a


title: [hs1991] rad5-del-2-a


title: [hs1991] rad18-del-3-a


title: [hs1991] rad1-del-1-b


title: [hs1991] rad23-del-1-a


title: [hs1991] rad23-del-1-b


title: [hs1991] rad18-del-4-b


title: [hs1991] pus1-del-1-b


title: [hs1991] pus9-del-1-a


title: [hs1991] puf4-del-2-b


title: [hs1991] pus1-del-1-a


title: [hs1991] puf4-del-1-a


title: [hs1991] rad26-del-1-b


title: [hs1991] puf3-del-1-b


title: [hs1991] puf6-del-2-b


title: [hs1991] rad26-del-1-a


title: [hs1991] rad1-del-1-a


title: [hs1991] pus7-del-1-a


title: [hs1991] puf6-del-2-a


title: [hs1991] puf3-del-1-a


title: [hs1991] pth2-del-1-a


title: [hs1991] pus7-del-2-b


title: [hs1991] pth2-del-1-b


title: [hs1991] psy2-del-1-b


title: [hs1991] pre9-del-1-b


title: [hs1991] ppr1-del-1-b


title: [hs1991] pol32-del-1-b


title: [hs1991] pol32-del-1-a


title: [hs1991] pre9-del-1-a


title: [hs1991] pog1-del-1-b


title: [hs1991] psy2-del-1-a


title: [hs1991] ppr1-del-1-a


title: [hs1991] pms1-del-1-b


title: [hs1991] poc4-del-1-a


title: [hs1991] poc4-del-1-b


title: [hs1991] pms1-del-1-a


title: [hs1991] pml39-del-1-a


title: [hs1991] pin4-del-2-a


title: [hs1991] pif1-del-1-b


title: [hs1991] pih1-del-2-b


title: [hs1991] plc1-del-3-b


title: [hs1991] pih1-del-1-a


title: [hs1991] pif1-del-1-a


title: [hs1991] pog1-del-1-a


title: [hs1991] pho80-del-1-b


title: [hs1991] plc1-del-3-a


title: [hs1991] pml39-del-1-b


title: [hs1991] pin4-del-1-b


title: [hs1991] pib2-del-1-b


title: [hs1991] pex4-del-1-a


title: [hs1991] pho13-del-1-a


title: [hs1991] pex22-del-1-a


title: [hs1991] pho80-del-1-a


title: [hs1991] pho13-del-2-b


title: [hs1991] pet112-del-1-b


title: [hs1991] pex5-del-1-a


title: [hs1991] pex4-del-1-b


title: [hs1991] pex12-del-1-a-erlenmeyer


title: [hs1991] pex10-del-2-b


title: [hs1991] pep7-del-1-a


title: [hs1991] pex22-del-1-b


title: [hs1991] pet112-del-1-a


title: [hs1991] pex5-del-1-b


title: [hs1991] pep7-del-1-b


title: [hs1991] pex12-del-1-b-erlenmeyer


title: [hs1991] pdr3-del-1-a


title: [hs1991] pep5-del-1-b


title: [hs1991] pcl8-del-1-a


title: [hs1991] pib2-del-1-a


title: [hs1991] pcl6-del-1-b


title: [hs1991] pep3-del-1-a


title: [hs1991] pep3-del-1-b


title: [hs1991] pcl8-del-1-b


title: [hs1991] pex10-del-2-a


title: [hs1991] pep5-del-1-a


title: [hs1991] pex2-del-2-b


title: [hs1991] pcl6-del-1-a


title: [hs1991] pex2-del-2-a


title: [hs1991] pbp1-del-1-a


title: [hs1991] pdr3-del-1-b


title: [hs1991] pbp1-del-1-b


title: [hs1991] opi3-del-rep-112C5-b


title: [hs1991] pat1-del-1-a


title: [hs1991] oca6-del-1-a


title: [hs1991] pap2-del-1-a


title: [hs1991] oca5-del-1-a


title: [hs1991] oca5-del-1-b


title: [hs1991] pap2-del-3-b


title: [hs1991] nup60-del-1-b


title: [hs1991] nup133-del-matA-2-b


title: [hs1991] opi3-del-1-a


title: [hs1991] oca4-del-1-a


title: [hs1991] nup188-del-2-a


title: [hs1991] nup170-del-1-b


title: [hs1991] nup188-del-2-b


title: [hs1991] opi1-del-1-b


title: [hs1991] oca6-del-1-b


title: [hs1991] pba1-del-1-b


title: [hs1991] pba1-del-1-a


title: [hs1991] nrp1-del-2-b


title: [hs1991] nup120-del-3-b


title: [hs1991] opi1-del-1-a


title: [hs1991] nup133-del-matA-2-a


title: [hs1991] oca4-del-1-b


title: [hs1991] nrp1-del-1-a


title: [hs1991] nup170-del-1-a


title: [hs1991] npr2-del-1-a


title: [hs1991] npt1-del-2-b


title: [hs1991] npr2-del-2-b


title: [hs1991] npt1-del-2-a


title: [hs1991] nup120-del-3-a


title: [hs1991] npl3-del-2-a


title: [hs1991] npl3-del-2-b


title: [hs1991] nup60-del-1-a


title: [hs1991] nmd2-del-2-b


title: [hs1991] nop6-del-1-a


title: [hs1991] nop6-del-1-b


title: [hs1991] nmd2-del-1-a


title: [hs1991] nop12-del-1-b


title: [hs1991] new1-del-1-b


title: [hs1991] nfi1-del-2-a


title: [hs1991] ncs6-del-2-b


title: [hs1991] ncs6-del-2-a


title: [hs1991] nkp2-del-1-b


title: [hs1991] nop12-del-1-a


title: [hs1991] ncs2-del-1-b


title: [hs1991] nce102-del-2-b


title: [hs1991] nfi1-del-2-b


title: [hs1991] new1-del-1-a


title: [hs1991] nkp2-del-1-a


title: [hs1991] nce102-del-1-a


title: [hs1991] ncs2-del-1-a


title: [hs1991] nbp2-del-1-b


title: [hs1991] nam7-del-2-b


title: [hs1991] nbp2-del-1-a


title: [hs1991] nam7-del-1-a


title: [hs1991] mum2-del-1-b


title: [hs1991] mud2-del-3-a


title: [hs1991] mud2-del-3-b


title: [hs1991] msh1-del-1-a


title: [hs1991] mrt4-del-1-a


title: [hs1991] msn5-del-1-b


title: [hs1991] mum2-del-1-a


title: [hs1991] msh2-del-1-a


title: [hs1991] mub1-del-1-b


title: [hs1991] mub1-del-1-a


title: [hs1991] msn5-del-1-a


title: [hs1991] mrc1-del-2-b


title: [hs1991] mrn1-del-1-b


title: [hs1991] mre11-del-1-b


title: [hs1991] msh1-del-1-b


title: [hs1991] msc1-del-1-b


title: [hs1991] pat1-del-1-b


title: [hs1991] mrn1-del-1-a


title: [hs1991] mus81-del-1-b


title: [hs1991] msc1-del-1-a


title: [hs1991] mus81-del-1-a


title: [hs1991] mrc1-del-1-a


title: [hs1991] mrt4-del-2-b


title: [hs1991] mot3-del-2-a


title: [hs1991] mga2-del-1-b


title: [hs1991] mms22-del-1-b


title: [hs1991] mot3-del-2-b


title: [hs1991] mks1-del-1-a


title: [hs1991] met13-del-2-b


title: [hs1991] mks1-del-1-b


title: [hs1991] mfb1-del-1-b


title: [hs1991] mms22-del-1-a


title: [hs1991] met18-del-1-b


title: [hs1991] mms4-del-1-b


title: [hs1991] mei5-del-2-b


title: [hs1991] med13-del-2-b


title: [hs1991] mre11-del-1-a


title: [hs1991] mfb1-del-1-a


title: [hs1991] med13-del-2-a


title: [hs1991] mft1-del-1-a


title: [hs1991] met13-del-2-a


title: [hs1991] mig1-del-3-a


title: [hs1991] med12-del-1-b


title: [hs1991] mig1-del-3-b


title: [hs1991] mms1-del-1-b


title: [hs1991] met18-del-1-a


title: [hs1991] mft1-del-1-b


title: [hs1991] mei5-del-1-a


title: [hs1991] msh2-del-1-b


title: [hs1991] mga2-del-1-c


title: [hs1991] mms4-del-1-a


title: [hs1991] mdm30-del-1-b


title: [hs1991] mds3-del-1-a


title: [hs1991] mac1-del-2-b


title: [hs1991] med12-del-1-a


title: [hs1991] mak31-del-1-b


title: [hs1991] mak31-del-1-a


title: [hs1991] lsm6-del-3-a


title: [hs1991] mcm21-del-1-b


title: [hs1991] mbp1-del-1-a


title: [hs1991] ltv1-del-1-b


title: [hs1991] mcm21-del-1-a


title: [hs1991] mdm30-del-1-a


title: [hs1991] mbp1-del-1-b


title: [hs1991] lsm7-del-2-b


title: [hs1991] lrp1-del-1-b


title: [hs1991] lsm6-del-3-b


title: [hs1991] lsm12-del-3-e


title: [hs1991] mac1-del-4-a


title: [hs1991] lsm1-del-3-b


title: [hs1991] lsm7-del-1-a


title: [hs1991] lrp1-del-1-a


title: [hs1991] lsm1-del-3-a


title: [hs1991] loc1-del-1-b


title: [hs1991] los1-del-1-b


title: [hs1991] ltv1-del-1-a


title: [hs1991] loc1-del-1-a


title: [hs1991] lsm12-del-3-d


title: [hs1991] los1-del-1-a


title: [hs1991] lem3-del-1-b


title: [hs1991] lea1-del-1-b


title: [hs1991] mms1-del-1-a


title: [hs1991] kti12-del-1-b


title: [hs1991] leu3-del-1-b


title: [hs1991] kem1-del-1-b


title: [hs1991] kap122-del-1-b


title: [hs1991] kar3-del-1-b


title: [hs1991] lem3-del-2-a


title: [hs1991] kap120-del-2-b


title: [hs1991] kem1-del-1-a


title: [hs1991] leu3-del-1-a


title: [hs1991] kar3-del-1-a


title: [hs1991] kap123-del-1-c


title: [hs1991] itt1-del-2-a


title: [hs1991] jjj1-del-1-b


title: [hs1991] ist3-del-1-a


title: [hs1991] kti12-del-1-a


title: [hs1991] ixr1-del-1-b


title: [hs1991] lea1-del-1-a


title: [hs1991] kap120-del-2-a


title: [hs1991] kap123-del-1-d


title: [hs1991] irc3-del-1-b


title: [hs1991] irs4-del-1-b


title: [hs1991] ipk1-del-1-a


title: [hs1991] iki3-del-2-a


title: [hs1991] ist3-del-2-b


title: [hs1991] jjj1-del-1-a


title: [hs1991] itt1-del-2-b


title: [hs1991] mds3-del-1-b


title: [hs1991] jnm1-del-1-b


title: [hs1991] irs4-del-1-a


title: [hs1991] ipk1-del-1-b


title: [hs1991] ino2-del-1-b


title: [hs1991] inp52-del-1-b


title: [hs1991] ino4-del-1-b


title: [hs1991] ino2-del-1-a


title: [hs1991] iki1-del-1-a


title: [hs1991] irc3-del-1-a


title: [hs1991] irc25-del-1-a


title: [hs1991] kap122-del-1-a


title: [hs1991] ino4-del-1-a


title: [hs1991] hur1-del-2-b


title: [hs1991] jnm1-del-1-a


title: [hs1991] inp52-del-1-a


title: [hs1991] iki1-del-1-b


title: [hs1991] ixr1-del-1-a


title: [hs1991] iki3-del-2-b


title: [hs1991] irc25-del-1-b


title: [hs1991] hur1-del-1-a


title: [hs1991] hse1-del-1-b


title: [hs1991] hse1-del-1-a


title: [hs1991] hsc82-del-1-a


title: [hs1991] hpa1-del-matA-1-a


title: [hs1991] hpa1-del-matA-1-b


title: [hs1991] hom2-del-1-b


title: [hs1991] hos3-del-2-b


title: [hs1991] hom2-del-1-a


title: [hs1991] hos3-del-1-a


title: [hs1991] hnt3-del-1-a


title: [hs1991] hsc82-del-1-b


title: [hs1991] hnt3-del-1-b


title: [hs1991] hht1-del-2-b


title: [hs1991] hhf1-del-1-b


title: [hs1991] hfm1-del-1-b


title: [hs1991] hmo1-del-2-b


title: [hs1991] hmo1-del-2-a


title: [hs1991] hfm1-del-1-a


title: [hs1991] heh2-del-1-a


title: [hs1991] hap5-del-2-b


title: [hs1991] hhf1-del-1-a


title: [hs1991] hap5-del-1-a


title: [hs1991] heh2-del-1-b


title: [hs1991] hap1-del-1-b


title: [hs1991] hcr1-del-1-a


title: [hs1991] hht1-del-1-a


title: [hs1991] gzf3-del-1-a


title: [hs1991] hap1-del-1-a


title: [hs1991] hal9-del-1-b


title: [hs1991] hcr1-del-2-b


title: [hs1991] gtr1-del-3-a


title: [hs1991] gtr1-del-3-b


title: [hs1991] gzf3-del-1-b


title: [hs1991] gln3-del-1-a


title: [hs1991] gis4-del-1-b


title: [hs1991] gga2-del-1-a


title: [hs1991] hal9-del-1-a


title: [hs1991] gln3-del-1-b


title: [hs1991] gcn4-del-1-a


title: [hs1991] gat2-del-1-a


title: [hs1991] gal80-del-1-b


title: [hs1991] gat2-del-1-b


title: [hs1991] gcn4-del-1-b


title: [hs1991] gis4-del-1-a


title: [hs1991] fzf1-del-1-b


title: [hs1991] fks1-del-2-a


title: [hs1991] gal80-del-1-a


title: [hs1991] fmp38-del-3-b


title: [hs1991] fkh1-del-1-b


title: [hs1991] fzf1-del-1-a


title: [hs1991] fra2-del-1-a


title: [hs1991] fks1-del-1-b


title: [hs1991] fin1-del-1-a


title: [hs1991] fra2-del-1-b


title: [hs1991] exo1-del-1-a


title: [hs1991] eug1-del-1-b


title: [hs1991] est3-del-2-b


title: [hs1991] fkh1-del-1-a


title: [hs1991] est3-del-2-a


title: [hs1991] fmp38-del-3-a


title: [hs1991] exo1-del-1-b


title: [hs1991] est1-del-1-b


title: [hs1991] fin1-del-1-b


title: [hs1991] gga2-del-1-b


title: [hs1991] est1-del-1-a


title: [hs1991] eug1-del-1-a


title: [hs1991] elp6-del-1-a


title: [hs1991] erg2-del-1-b


title: [hs1991] esc2-del-2-b


title: [hs1991] erg2-del-1-a


title: [hs1991] elp6-del-1-b


title: [hs1991] elp4-del-1-a


title: [hs1991] elp4-del-1-b


title: [hs1991] elp2-del-1-b


title: [hs1991] esc2-del-2-a


title: [hs1991] elg1-del-2-a


title: [hs1991] elp2-del-1-a


title: [hs1991] elc1-del-1-b


title: [hs1991] elf1-del-2-b


title: [hs1991] ela1-del-1-b


title: [hs1991] efg1-del-1-b


title: [hs1991] elf1-del-1-a


title: [hs1991] elc1-del-1-a


title: [hs1991] ede1-del-1-b


title: [hs1991] ela1-del-1-a


title: [hs1991] ede1-del-1-a


title: [hs1991] ecm30-del-1-b


title: [hs1991] edc1-del-1-a


title: [hs1991] ebs1-del-1-a


title: [hs1991] elg1-del-1-b


title: [hs1991] dst1-del-1-a


title: [hs1991] dst1-del-1-b


title: [hs1991] ecm30-del-1-a


title: [hs1991] edc1-del-1-b


title: [hs1991] dpb3-del-1-b


title: [hs1991] doc1-del-1-b


title: [hs1991] dss1-del-1-a


title: [hs1991] dss1-del-1-b


title: [hs1991] ebs1-del-1-b


title: [hs1991] doc1-del-1-a


title: [hs1991] efg1-del-1-a


title: [hs1991] doa4-del-2-c


title: [hs1991] doa4-del-2-b


title: [hs1991] doa1-del-1-a


title: [hs1991] dig1-del-1-b


title: [hs1991] did4-del-1-b


title: [hs1991] dpb3-del-1-a


title: [hs1991] doa1-del-1-b


title: [hs1991] deg1-del-2-b


title: [hs1991] deg1-del-1-a


title: [hs1991] dig2-del-1-b


title: [hs1991] did4-del-1-a


title: [hs1991] dhh1-del-1-b


title: [hs1991] dcc1-del-2-a


title: [hs1991] def1-del-2-b


title: [hs1991] ddr48-del-1-b


title: [hs1991] dhh1-del-1-a


title: [hs1991] dcs1-del-1-b


title: [hs1991] dig1-del-1-a


title: [hs1991] dbr1-del-2-b


title: [hs1991] dcs1-del-1-a


title: [hs1991] dcc1-del-2-b


title: [hs1991] def1-del-2-a


title: [hs1991] ddr48-del-1-a


title: [hs1991] dig2-del-1-a


title: [hs1991] dbp3-del


title: [hs1991] dat1-del-1-a


title: [hs1991] cue1-del-1-a


title: [hs1991] dal81-del-rep-100A3-b


title: [hs1991] cup9-del-1-a


title: [hs1991] dal81-del-1-c


title: [hs1991] dat1-del-1-b


title: [hs1991] ctf8-del-3-g


title: [hs1991] dbp3-del-1-a


title: [hs1991] dbr1-del-2-a


title: [hs1991] cycC-del-2-a

source_name: cycC-del

value: cycC-del


title: [hs1991] cue1-del-1-b


title: [hs1991] cycC-del-2-b


title: [hs1991] ctf8-del-1-a


title: [hs1991] ctf19-del-1-a


title: [hs1991] ctf4-del-1-d


title: [hs1991] ctf19-del-1-b


title: [hs1991] ctf4-del-2-a


title: [hs1991] ctf18-del-1-b


title: [hs1991] cst6-del-3-b


title: [hs1991] cpr6-del-1-b


title: [hs1991] cst6-del-3-a


title: [hs1991] csm1-del-1-a


title: [hs1991] ctf18-del-1-a


title: [hs1991] csm3-del-1-a


title: [hs1991] cln3-del-2-a


title: [hs1991] cln2-del-1-a


title: [hs1991] clb5-del-1-b


title: [hs1991] cpr6-del-1-a


title: [hs1991] csm3-del-1-b


title: [hs1991] cup9-del-1-b


title: [hs1991] cln2-del-1-b


title: [hs1991] clb2-del-1-b


title: [hs1991] cln3-del-1-b


title: [hs1991] ckb2-del-1-b


title: [hs1991] clb5-del-1-a


title: [hs1991] clb1-del-2-a


title: [hs1991] ckb1-del-1-a


title: [hs1991] clb2-del-1-a


title: [hs1991] cin8-del-2-b


title: [hs1991] ckb2-del-1-a


title: [hs1991] cin5-del-2-a


title: [hs1991] ckb1-del-1-b


title: [hs1991] clb1-del-2-b


title: [hs1991] cho2-del-2-b


title: [hs1991] cho2-del-1-b


title: [hs1991] cin8-del-2-a


title: [hs1991] cin5-del-2-b


title: [hs1991] chl1-del-1-b


title: [hs1991] csm1-del-1-b


title: [hs1991] chf1-del-1-b


title: [hs1991] chl1-del-2-a


title: [hs1991] cha4-del-1-b


title: [hs1991] cgr1-del-1-a


title: [hs1991] cgi121-del-1-d


title: [hs1991] cha4-del-2-a


title: [hs1991] cgi121-del-1-a


title: [hs1991] chf1-del-1-a


title: [hs1991] cgr1-del-1-b


title: [hs1991] cdh1-del-1-a


title: [hs1991] cdc40-del-1-a


title: [hs1991] cbf1-del-1-b


title: [hs1991] cce1-del-1-b


title: [hs1991] cdc40-del-2-b


title: [hs1991] cbf1-del-1-a


title: [hs1991] car2-del-1-a


title: [hs1991] cce1-del-2-a


title: [hs1991] caf17-del-1-b


title: [hs1991] car2-del-1-b


title: [hs1991] bul1-del-1-a


title: [hs1991] bud21-del-1-b


title: [hs1991] caf17-del-1-c


title: [hs1991] bud21-del-1-a


title: [hs1991] bul1-del-1-b


title: [hs1991] cdh1-del-1-b


title: [hs1991] bud22-del-1-b


title: [hs1991] cdc26-del-1-a


title: [hs1991] bud22-del-1-a


title: [hs1991] bud20-del-1-b


title: [hs1991] bud13-del-1-b


title: [hs1991] bud13-del-1-a


title: [hs1991] bim1-del-1-b


title: [hs1991] bro1-del-1-b


title: [hs1991] bas1-del-1-b


title: [hs1991] bmh1-del-1-a


title: [hs1991] brr1-del-1-a


title: [hs1991] bas1-del-1-a


title: [hs1991] bmh1-del-1-b


title: [hs1991] azf1-del-1-a


title: [hs1991] brr1-del-1-b


title: [hs1991] bre5-del-1-a


title: [hs1991] bud20-del-1-a


title: [hs1991] atg32-del-1-a


title: [hs1991] cdc26-del-1-b


title: [hs1991] bcs1-del-1-b


title: [hs1991] atg23-del-1-a


title: [hs1991] azf1-del-1-b


title: [hs1991] bim1-del-1-a


title: [hs1991] bre5-del-1-b


title: [hs1991] atg23-del-1-b


title: [hs1991] bro1-del-1-a


title: [hs1991] atg21-del-1-b


title: [hs1991] bik1-del-1-a


title: [hs1991] atg32-del-1-b


title: [hs1991] atg10-del-1-b


title: [hs1991] atg24-del-1-a


title: [hs1991] ask10-del-1-b


title: [hs1991] atg21-del-1-a


title: [hs1991] ask10-del-1-a


title: [hs1991] asi2-del-1-b


title: [hs1991] atg10-del-1-a


title: [hs1991] ase1-del-1-b


title: [hs1991] arg81-del-1-b


title: [hs1991] arg80-del-2-a


title: [hs1991] arx1-del-1-a


title: [hs1991] arg82-del-1-b


title: [hs1991] apq12-del-2-b


title: [hs1991] arg80-del-1-b


title: [hs1991] ase1-del-1-a


title: [hs1991] arx1-del-1-b


title: [hs1991] asi2-del-1-a


title: [hs1991] apn2-del-1-d


title: [hs1991] arg81-del-1-a


title: [hs1991] apq12-del-2-a


title: [hs1991] aim1-del-1-a


title: [hs1991] aim1-del-1-b


title: [hs1991] apn2-del-1-a


title: [hs1991] apc9-del-1-b


title: [hs1991] arg82-del-1-a


title: [hs1991] add66-del-1-b


title: [hs1991] aft1-del-2-a


title: [hs1991] apc9-del-1-a


title: [hs1991] ace2-del-1-b


title: [hs1991] add66-del-1-a


title: [hs1991] aco1-del-2-a


title: [hs1991] aco1-del-2-b


title: [hs1991] aft1-del-2-b


title: [hs1991] ace2-del-1-a


title: [hs1991] abf2-del-1-d


title: [hs1991] abf2-del-2-a


title: [hs1990] zds2-del-1-b


title: [hs1990] zds1-del-1-b


title: [hs1990] zip1-del-1-a


title: [hs1990] yrr1-del-1-d


title: [hs1990] zip1-del-1-b


title: [hs1990] yra2-del-1-b


title: [hs1990] yrm1-del-1-a


title: [hs1990] yrr1-del-1-b


title: [hs1990] ypt31-del-3-a


title: [hs1990] yuh1-del-1-b


title: [hs1990] yps1-del-1-a


title: [hs1990] ypr196w-del-1-b


title: [hs1990] ypr078c-del-1-a


title: [hs1990] yra2-del-1-a


title: [hs1990] ypr174c-del-1-a


title: [hs1990] ypl066w-del-1-b


title: [hs1990] zds1-del-1-a


title: [hs1990] ypl260w-del-1-a


title: [hs1990] ypl260w-del-1-b


title: [hs1990] ypl066w-del-1-a


title: [hs1990] yrm1-del-1-b


title: [hs1990] ypt31-del-3-b


title: [hs1990] yuh1-del-1-a


title: [hs1990] ypr174c-del-1-b


title: [hs1990] ypl247c-del-1-b


title: [hs1990] ypr022c-del-1-a


title: [hs1990] ypr196w-del-1-a


title: [hs1990] ypr015c-del-1-a


title: [hs1990] ypr013c-del-1-b


title: [hs1990] yox1-del-1-b


title: [hs1990] yos9-del-2-b


title: [hs1990] yos9-del-2-a


title: [hs1990] yox1-del-1-a


title: [hs1990] yor251c-del-1-b


title: [hs1990] ypl216w-del-1-a


title: [hs1990] ynl155w-del-1-b


title: [hs1990] yor052c-del-1-a


title: [hs1990] ynr063w-del-1-a


title: [hs1990] yor251c-del-1-a


title: [hs1990] yor052c-del-1-b


title: [hs1990] ymr310c-del-1-b


title: [hs1990] yor051c-del-1-a


title: [hs1990] yor051c-del-1-b


title: [hs1990] yol053w-del-1-a


title: [hs1990] ymr315w-del-1-b


title: [hs1990] ynl155w-del-1-a


title: [hs1990] ymr074c-del-1-b


title: [hs1990] ymr258c-del-1-b


title: [hs1990] yol086w-a-del-1-a


title: [hs1990] yol159c-del-1-b


title: [hs1990] ymr310c-del-1-a


title: [hs1990] yml119w-del-1-b


title: [hs1990] yml082w-del-2-a


title: [hs1990] ymr003w-del-1-a


title: [hs1990] ymr258c-del-1-a


title: [hs1990] yml119w-del-1-a


title: [hs1990] yme2-del-1-a


title: [hs1990] ynk1-del-1-b


title: [hs1990] ymr209c-del-1-b


title: [hs1990] yml081w-del-2-b


title: [hs1990] ymr1-del-1-b


title: [hs1990] yml081w-del-1-a


title: [hs1990] ylr455w-del-2-a


title: [hs1990] ylr445w-del-2-a


title: [hs1990] yml082w-del-1-d


title: [hs1990] ylr419w-del-1-a


title: [hs1990] ylr455w-del-2-c


title: [hs1990] ylr224w-del-1-a


title: [hs1990] ylr419w-del-1-b


title: [hs1990] ylr224w-del-1-b


title: [hs1990] ylr143w-del-2-a


title: [hs1990] ykr017c-del-1-a


title: [hs1990] ykl222c-del-1-b


title: [hs1990] yll032c-del-1-a


title: [hs1990] ylr364w-del-1-b


title: [hs1990] yll054c-del-1-b


title: [hs1990] ylr271w-del-1-a


title: [hs1990] ylr364w-del-1-a


title: [hs1990] ykr059w-del-1-b


title: [hs1990] ykl107w-del-2-a


title: [hs1990] yjr096w-del-2-a


title: [hs1990] yll032c-del-1-b


title: [hs1990] ykl027w-del-1-b


title: [hs1990] ykr017c-del-1-b


title: [hs1990] ykl091c-del-1-a


title: [hs1990] ylr143w-del-1-b


title: [hs1990] ykl027w-del-1-a


title: [hs1990] yjr096w-del-1-b


title: [hs1990] yim1-del-1-a


title: [hs1990] yjr030c-del-1-a


title: [hs1990] yjl043w-del-1-a


title: [hs1990] yhr202w-del-1-a


title: [hs1990] yhr087w-del-1-b


title: [hs1990] yhr032w-del-1-b


title: [hs1990] yjl049w-del-1-b


title: [hs1990] ygr283c-del-1-b


title: [hs1990] yhr192w-del-1-a


title: [hs1990] ygr283c-del-1-a


title: [hs1990] ygr250c-del-1-a


title: [hs1990] yhr202w-del-1-b


title: [hs1990] ygr067c-del-1-a


title: [hs1990] ygl082w-del-1-a


title: [hs1990] yhp1-del-1-b


title: [hs1990] ygr021w-del-1-b


title: [hs1990] yfl052w-del-1-a


title: [hs1990] yhb1-del-1-b


title: [hs1990] yfl052w-del-1-b


title: [hs1990] yfr032c-del-1-a


title: [hs1990] ydr131c-del-1-a


title: [hs1990] yhr032w-del-1-a


title: [hs1990] yer184c-del-1-b


title: [hs1990] yer137c-del-1-b


title: [hs1990] yer130c-del-1-b


title: [hs1990] yel043w-del-2-a


title: [hs1990] ydr063w-del-2-b


title: [hs1990] yel043w-del-1-b


title: [hs1990] ydr370c-del-1-a


title: [hs1990] ydr034w-b-del-1-b


title: [hs1990] ydr049w-del-1-b


title: [hs1990] ydr131c-del-1-b


title: [hs1990] ydr063w-del-1-b


title: [hs1990] ydr049w-del-1-a


title: [hs1990] ydr514c-del-1-b


title: [hs1990] ydl089w-del-1-b


title: [hs1990] ydr034w-b-del-1-a


title: [hs1990] ydr026c-del-1-a


title: [hs1990] ydl089w-del-1-a


title: [hs1990] ycr016w-del-1-a


title: [hs1990] ybt1-del-1-a


title: [hs1990] ybr141c-del-1-b


title: [hs1990] yap7-del-1-a


title: [hs1990] ybr030w-del-1-a


title: [hs1990] yap6-del-1-a


title: [hs1990] ybr225w-del-1-a


title: [hs1990] ybr225w-del-1-b


title: [hs1990] ybl055c-del-1-b


title: [hs1990] yap5-del-1-b


title: [hs1990] yap5-del-1-a


title: [hs1990] ybr062c-del-1-a


title: [hs1990] ybr271w-del-1-b


title: [hs1990] yap7-del-1-b


title: [hs1990] ybr062c-del-1-b


title: [hs1990] yap6-del-1-d


title: [hs1990] yap3-del-1-a


title: [hs1990] ybl010c-del-1-a


title: [hs1990] yat1-del-1-a


title: [hs1990] ybl028c-del-1-a


title: [hs1990] wtm1-del-1-b


title: [hs1990] yal027w-del-1-b


title: [hs1990] xbp1-del-1-a


title: [hs1990] wtm2-del-1-b


title: [hs1990] war1-del-1-a


title: [hs1990] wtm2-del-1-a


title: [hs1990] yal044w-a-del-1-a


title: [hs1990] wtm1-del-1-a


title: [hs1990] vid30-del-1-a


title: [hs1990] war1-del-1-b


title: [hs1990] ylr296w-del-1-b


title: [hs1990] vid24-del-1-b


title: [hs1990] vps13-del-1-a


title: [hs1990] vid24-del-1-a


title: [hs1990] vid30-del-1-b


title: [hs1990] ubx7-del-2-a


title: [hs1990] usv1-del-1-b


title: [hs1990] ula1-del-1-a


title: [hs1990] ufo1-del-1-a


title: [hs1990] uga3-del-1-a


title: [hs1990] uip4-del-1-a


title: [hs1990] uga1-del-1-a


title: [hs1990] vik1-del-1-a


title: [hs1990] upc2-del-3-b


title: [hs1990] upc2-del-3-a


title: [hs1990] uip4-del-1-b


title: [hs1990] ubx5-del-1-b


title: [hs1990] ubx4-del-1-a


title: [hs1990] ubx5-del-1-a


title: [hs1990] vps13-del-1-b


title: [hs1990] ubx7-del-2-b


title: [hs1990] ubx6-del-1-a


title: [hs1990] ula1-del-1-b


title: [hs1990] ubx6-del-1-b


title: [hs1990] ubs1-del-1-b


title: [hs1990] ubp9-del-1-b


title: [hs1990] ubp7-del-1-b


title: [hs1990] ubs1-del-1-a


title: [hs1990] ubp5-del-1-b


title: [hs1990] ubp9-del-1-a


title: [hs1990] ubp5-del-1-a


title: [hs1990] ufo1-del-1-b


title: [hs1990] ubp12-del-2-b


title: [hs1990] ubi4-del-1-b


title: [hs1990] ubi4-del-1-a


title: [hs1990] ubp11-del-1-b


title: [hs1990] ubc12-del-1-a


title: [hs1990] ubc5-del-1-b


title: [hs1990] ubp2-del-1-b


title: [hs1990] ubc5-del-1-a


title: [hs1990] ubc12-del-1-b


title: [hs1990] ubc11-del-1-a


title: [hs1990] ubp2-del-1-a


title: [hs1990] ubp12-del-2-a


title: [hs1990] ubc11-del-1-b


title: [hs1990] tye7-del-1-a


title: [hs1990] tye7-del-1-b


title: [hs1990] tri1-del-1-a


title: [hs1990] tus1-del-1-a


title: [hs1990] tul1-del-1-b


title: [hs1990] tul1-del-1-a


title: [hs1990] trf5-del-2-b


title: [hs1990] tus1-del-1-b


title: [hs1990] trx1-del-1-a


title: [hs1990] tre1-del-1-b


title: [hs1990] tre1-del-1-a


title: [hs1990] tpp1-del-1-a


title: [hs1990] tpa1-del-1-b


title: [hs1990] tos8-del-1-b


title: [hs1990] top1-del-1-b


title: [hs1990] top1-del-1-a


title: [hs1990] tof2-del-1-b


title: [hs1990] tma46-del-2-b


title: [hs1990] tof1-del-2-a


title: [hs1990] tof1-del-2-b


title: [hs1990] tma20-del-2-a


title: [hs1990] tma64-del-1-a


title: [hs1990] tma20-del-1-b


title: [hs1990] tho1-del-1-b


title: [hs1990] tho1-del-1-a


title: [hs1990] tif4632-del-1-b


title: [hs1990] tea1-del-1-b


title: [hs1990] tep1-del-1-b


title: [hs1990] tep1-del-1-a


title: [hs1990] thi3-del-1-a


title: [hs1990] tcb3-del-1-b


title: [hs1990] tex1-del-1-a


title: [hs1990] tbs1-del-1-b


title: [hs1990] tdp1-del-1-b


title: [hs1990] tax4-del-1-b


title: [hs1990] tex1-del-1-b


title: [hs1990] tbs1-del-2-a


title: [hs1990] tan1-del-1-a


title: [hs1990] thi2-del-1-a


title: [hs1990] tax4-del-1-a


title: [hs1990] sut1-del-1-b


title: [hs1990] tcb3-del-1-a


title: [hs1990] swh1-del-1-b


title: [hs1990] sut2-del-2-b


title: [hs1990] syf2-del-1-a


title: [hs1990] sut2-del-2-a


title: [hs1990] swh1-del-1-d


title: [hs1990] sti1-del-2-b


title: [hs1990] ubx4-del-1-b


title: [hs1990] sti1-del-2-a


title: [hs1990] tad1-del-1-a


title: [hs1990] ste23-del-1-a


title: [hs1990] stb3-del-1-b


title: [hs1990] stb6-del-1-b


title: [hs1990] srx1-del-1-a


title: [hs1990] ssd1-del-2-a


title: [hs1990] stp4-del-1-a


title: [hs1990] src1-del-1-a


title: [hs1990] ubp11-del-1-a


title: [hs1990] sps4-del-2-a


title: [hs1990] src1-del-1-b


title: [hs1990] sqs1-del-1-a


title: [hs1990] srl3-del-1-a


title: [hs1990] spg5-del-1-b


title: [hs1990] sps4-del-1-b


title: [hs1990] spo22-del-1-b


title: [hs1990] srx1-del-1-b


title: [hs1990] sps18-del-1-b


title: [hs1990] spo13-del-1-b


title: [hs1990] srl4-del-1-a


title: [hs1990] spo22-del-1-d


title: [hs1990] ssb2-del-1-a


title: [hs1990] spo11-del-1-b


title: [hs1990] spo13-del-1-a


title: [hs1990] snt2-del-1-b


title: [hs1990] spg5-del-1-a


title: [hs1990] sol1-del-1-a


title: [hs1990] sok1-del-2-a


title: [hs1990] sol1-del-1-b


title: [hs1990] sok1-del-2-b


title: [hs1990] snt2-del-1-a


title: [hs1990] spo12-del-1-a


title: [hs1990] snl1-del-2-a


title: [hs1990] slx4-del-1-b


title: [hs1990] smm1-del-1-b


title: [hs1990] slx1-del-1-a


title: [hs1990] sip3-del-1-b


title: [hs1990] slf1-del-1-b


title: [hs1990] ski7-del-1-b


title: [hs1990] ski8-del-1-b


title: [hs1990] skp2-del-1-a


title: [hs1990] smm1-del-1-a


title: [hs1990] ski2-del-1-b


title: [hs1990] ski8-del-1-a


title: [hs1990] ski7-del-1-a


title: [hs1990] siz1-del-1-b


title: [hs1990] sli1-del-1-b


title: [hs1990] shu1-del-1-a


title: [hs1990] sgn1-del-1-b


title: [hs1990] ski2-del-1-a


title: [hs1990] siz1-del-1-a


title: [hs1990] sgt2-del-1-a


title: [hs1990] slk19-del-1-a


title: [hs1990] sim1-del-1-b


title: [hs1990] sip3-del-1-a


title: [hs1990] snl1-del-2-b


title: [hs1990] she2-del-1-a


title: [hs1990] smp1-del-1-a


title: [hs1990] sml1-del-1-a


title: [hs1990] skp2-del-1-b


title: [hs1990] sfg1-del-1-b


title: [hs1990] sfb2-del-1-a


title: [hs1990] ssf2-del-1-a


title: [hs1990] sef1-del-1-b


title: [hs1990] set7-del-1-a


title: [hs1990] rsr1-del-1-a


title: [hs1990] rsf2-del-1-b


title: [hs1990] rri2-del-2-b


title: [hs1990] set6-del-1-c


title: [hs1990] rub1-del-4-a


title: [hs1990] rup1-del-1-b


title: [hs1990] rsf1-del-1-a


title: [hs1990] rrt14-del-1-b


title: [hs1990] sef1-del-1-a


title: [hs1990] saf1-del-1-a


title: [hs1990] rts3-del-2-b


title: [hs1990] saf1-del-1-b


title: [hs1990] sap185-del-1-a


title: [hs1990] rts3-del-2-a


title: [hs1990] rri1-del-1-b


title: [hs1990] ubp7-del-1-a


title: [hs1990] rup1-del-1-a


title: [hs1990] rsa3-del-1-b


title: [hs1990] rtr2-del-1-b


title: [hs1990] sfb2-del-1-b


title: [hs1990] rri2-del-2-a


title: [hs1990] sap4-del-1-b


title: [hs1990] rsf2-del-1-a


title: [hs1990] rpo41-del-1-c


title: [hs1990] rri1-del-1-a


title: [hs1990] sap4-del-1-a


title: [hs1990] sap185-del-1-b


title: [hs1990] rpo41-del-1-a


title: [hs1990] rom1-del-1-a


title: [hs1990] rkr1-del-1-a


title: [hs1990] rlm1-del-1-a


title: [hs1990] rnh70-del-1-b


title: [hs1990] rnh1-del-1-d


title: [hs1990] rpi1-del-2-b


title: [hs1990] rnh202-del-1-b


title: [hs1990] rif2-del-1-b


title: [hs1990] rpn14-del-1-a


title: [hs1990] rnh1-del-1-a


title: [hs1990] rpi1-del-2-a


title: [hs1990] rpl38-del-del-1-b


title: [hs1990] rlm1-del-2-b


title: [hs1990] rkr1-del-1-b


title: [hs1990] rnh203-del-2-b


title: [hs1990] rom1-del-1-b


title: [hs1990] rim4-del-1-a


title: [hs1990] rex4-del-1-a


title: [hs1990] rnh201-del-1-b


title: [hs1990] rex3-del-1-a


title: [hs1990] rnh203-del-1-b


title: [hs1990] rnp1-del-1-b


title: [hs1990] rmd5-del-1-b


title: [hs1990] rpn14-del-1-b


title: [hs1990] rgm1-del-1-a


title: [hs1990] rpl38-del-1-a


title: [hs1990] rmd5-del-1-a


title: [hs1990] rex2-del-1-b


title: [hs1990] reh1-del-2-b


title: [hs1990] rev1-del-1-b


title: [hs1990] rds2-del-1-a


title: [hs1990] rec114-del-1-b


title: [hs1990] rec104-del-1-b


title: [hs1990] rec107-del-1-b


title: [hs1990] red1-del-1-b


title: [hs1990] rdr1-del-1-b


title: [hs1990] rec102-del-1-b


title: [hs1990] rds1-del-1-a


title: [hs1990] reh1-del-1-a


title: [hs1990] rec8-del-1-a


title: [hs1990] rad7-del-1-b


title: [hs1990] rad7-del-1-a


title: [hs1990] rad34-del-1-b


title: [hs1990] rdr1-del-2-a


title: [hs1990] rad59-del-1-b


title: [hs1990] rad4-del-1-a


title: [hs1990] rbg2-del-1-b


title: [hs1990] rad9-del-1-a


title: [hs1990] rad33-del-1-a


title: [hs1990] rad30-del-1-a


title: [hs1990] rad17-del-1-a


title: [hs1990] rdh54-del-1-a


title: [hs1990] rad14-del-1-a


title: [hs1990] put3-del-1-b


title: [hs1990] rad17-del-1-b


title: [hs1990] rad24-del-1-b


title: [hs1990] rad10-del-1-b


title: [hs1990] pyc2-del-1-a


title: [hs1990] ptr2-del-1-b


title: [hs1990] qri7-del-1-b


title: [hs1990] put1-del-1-a


title: [hs1990] puf2-del-2-b


title: [hs1990] pub1-del-1-b


title: [hs1990] qri7-del-1-a


title: [hs1990] puf2-del-1-a


title: [hs1990] psy3-del-1-b


title: [hs1990] pub1-del-2-a


title: [hs1990] prm5-del-1-a


title: [hs1990] pyc1-del-1-b


title: [hs1990] prm3-del-1-b


title: [hs1990] rad30-del-1-b


title: [hs1990] ptr2-del-1-a


title: [hs1990] rad16-del-1-a


title: [hs1990] pso2-del-1-b


title: [hs1990] psh1-del-2-b


title: [hs1990] prm3-del-1-a


title: [hs1990] pom34-del-2-b


title: [hs1990] pom152-del-1-b


title: [hs1990] pol4-del-1-a


title: [hs1990] pom152-del-1-a


title: [hs1990] psh1-del-2-a


title: [hs1990] pom34-del-2-a


title: [hs1990] pmd1-del-1-a


title: [hs1990] plm2-del-1-b


title: [hs1990] pnc1-del-1-b


title: [hs1990] pmd1-del-2-b


title: [hs1990] pig1-del-1-a


title: [hs1990] pip2-del-1-b


title: [hs1990] pig1-del-1-b


title: [hs1990] pml1-del-1-a


title: [hs1990] pml1-del-1-b


title: [hs1990] pil1-del-1-b


title: [hs1990] pib1-del-1-b


title: [hs1990] pip2-del-1-a


title: [hs1990] pil1-del-1-a


title: [hs1990] phr1-del-1-b


title: [hs1990] pib1-del-1-a


title: [hs1990] phd1-del-1-b


title: [hs1990] pho84-del-1-b


title: [hs1990] pho2-del-2-b


title: [hs1990] pes4-del-2-a


title: [hs1990] rdi1-del-2-a


title: [hs1990] pdr1-del-1-a


title: [hs1990] rds1-del-1-b


title: [hs1990] pho2-del-1-a


title: [hs1990] pho84-del-1-a


title: [hs1990] pep4-del-1-b


title: [hs1990] pho4-del-1-a


title: [hs1990] pdr8-del-1-b


title: [hs1990] pes4-del-2-b


title: [hs1990] pct1-del-1-a


title: [hs1990] pho4-del-1-b


title: [hs1990] rec114-del-1-c


title: [hs1990] pdr1-del-1-b


title: [hs1990] pcl2-del-1-b


title: [hs1990] pct1-del-1-b


title: [hs1990] rub1-del-4-b


title: [hs1990] pcl9-del-1-b


title: [hs1990] pcl5-del-2-a


title: [hs1990] pcl2-del-2-a


title: [hs1990] pcl1-del-1-a


title: [hs1990] pcl5-del-1-b


title: [hs1990] pho81-del-1-b


title: [hs1990] pcl10-del-1-a


title: [hs1990] pdr5-del-1-b


title: [hs1990] pci8-del-1-b


title: [hs1990] rad16-del-1-b


title: [hs1990] pci8-del-1-a


title: [hs1990] pbp2-del-1-a


title: [hs1990] otu1-del-1-b


title: [hs1990] pan3-del-1-a


title: [hs1990] pac11-del-1-a


title: [hs1990] pan3-del-1-b


title: [hs1990] nup53-del-1-b


title: [hs1990] pac1-del-1-a


title: [hs1990] pau11-del-1-a


title: [hs1990] nvj1-del-1-b


title: [hs1990] pch2-del-1-a


title: [hs1990] nup157-del-1-b


title: [hs1990] nup42-del-1-b


title: [hs1990] otu1-del-1-a


title: [hs1990] oaf3-del-1-a


title: [hs1990] oaf1-del-1-b


title: [hs1990] ntg2-del-1-b


title: [hs1990] nup53-del-1-a


title: [hs1990] osh2-del-1-a


title: [hs1990] nup100-del-1-b


title: [hs1990] pan2-del-1-b


title: [hs1990] pan2-del-1-a


title: [hs1990] nup2-del-1-b


title: [hs1990] opy2-del-2-b


title: [hs1990] nvj1-del-1-a


title: [hs1990] nup42-del-1-a


title: [hs1990] opy2-del-2-a


title: [hs1990] nup2-del-1-a


title: [hs1990] nup157-del-1-a


title: [hs1990] ntg1-del-1-b


title: [hs1990] nup100-del-1-a


title: [hs1990] nop16-del-1-b


title: [hs1990] nop13-del-1-b


title: [hs1990] ntc20-del-1-b


title: [hs1990] ntg2-del-1-a


title: [hs1990] nnf2-del-1-b


title: [hs1990] ngr1-del-1-b


title: [hs1990] ngl2-del-1-b


title: [hs1990] ngl1-del-1-a


title: [hs1990] ndt80-del-1-b


title: [hs1990] ngl3-del-1-a


title: [hs1990] nab6-del-1-b


title: [hs1990] mvb12-del-1-b


title: [hs1990] nca2-del-1-a


title: [hs1990] nas6-del-1-a


title: [hs1990] nas6-del-1-b


title: [hs1990] nat4-del-1-b


title: [hs1990] ncl1-del-1-b


title: [hs1990] nde1-del-1-b


title: [hs1990] nnf2-del-2-a


title: [hs1990] msl1-del-1-b


title: [hs1990] msn1-del-1-b


title: [hs1990] msh3-del-1-a


title: [hs1990] nab6-del-2-a


title: [hs1990] nej1-del-1-a


title: [hs1990] msn1-del-1-a


title: [hs1990] nmd4-del-1-b


title: [hs1990] nrm1-del-1-b


title: [hs1990] msc6-del-1-b


title: [hs1990] msh6-del-1-d


title: [hs1990] msh5-del-1-b


title: [hs1990] msh6-del-1-b


title: [hs1990] nkp1-del-1-a


title: [hs1990] mss11-del-1-a


title: [hs1990] mrh1-del-1-a


title: [hs1990] mss11-del-1-b


title: [hs1990] mpp6-del-1-a


title: [hs1990] ndj1-del-1-a


title: [hs1990] msc6-del-1-a


title: [hs1990] mvb12-del-1-a


title: [hs1990] msc3-del-1-b


title: [hs1990] mpp6-del-1-b


title: [hs1990] mph1-del-1-c


title: [hs1990] mpt5-del-1-b


title: [hs1990] mnd2-del-1-b


title: [hs1990] mrh1-del-1-b


title: [hs1990] mmt1-del-1-b


title: [hs1990] mms2-del-1-a


title: [hs1990] mnd2-del-1-a


title: [hs1990] mms2-del-1-b


title: [hs1990] mlp2-del-1-a


title: [hs1990] mlp2-del-1-b


title: [hs1990] mlp1-del-1-a


title: [hs1990] mlp1-del-1-b


title: [hs1990] mpt5-del-1-a


title: [hs1990] mlh2-del-1-a


title: [hs1990] mmt1-del-1-a


title: [hs1990] mip6-del-1-b


title: [hs1990] mip1-del-1-b


title: [hs1990] mlh1-del-2-a


title: [hs1990] mig3-del-2-b


title: [hs1990] mlh1-del-1-b


title: [hs1990] mig2-del-4-b


title: [hs1990] mig3-del-2-a


title: [hs1990] mig2-del-4-a


title: [hs1990] mlh3-del-1-b


title: [hs1990] mga1-del-1-a


title: [hs1990] mga1-del-1-b


title: [hs1990] mht1-del-1-b


title: [hs1990] met32-del-1-b


title: [hs1990] met31-del-2-b


title: [hs1990] mip1-del-1-a


title: [hs1990] met10-del-1-b


title: [hs1990] met28-del-1-b


title: [hs1990] mgs1-del-1-a


title: [hs1990] mf(alpha)2-del-1-a


title: [hs1990] mgt1-del-1-b


title: [hs1990] met10-del-1-a


title: [hs1990] mer1-del-1-b


title: [hs1990] mer1-del-2-a


title: [hs1990] mep2-del-1-a


title: [hs1990] met31-del-1-a


title: [hs1990] mht1-del-1-a


title: [hs1990] mgs1-del-1-b


title: [hs1990] mf(alpha)1-del-1-b


title: [hs1990] met28-del-1-a


title: [hs1990] mep2-del-1-b


title: [hs1990] mei4-del-1-a


title: [hs1990] mcm22-del-1-a


title: [hs1990] mei4-del-1-c


title: [hs1990] mdy2-del-1-b


title: [hs1990] mec3-del-1-a


title: [hs1990] mip6-del-1-a


title: [hs1990] mdy2-del-1-a


title: [hs1990] mca1-del-1-b


title: [hs1990] mcm16-del-1-a


title: [hs1990] mcm16-del-1-b


title: [hs1990] mal33-del-2-b


title: [hs1990] mec3-del-1-b


title: [hs1990] mam1-del-1-a


title: [hs1990] mbf1-del-1-a


title: [hs1990] mal13-del-1-a


title: [hs1990] mad1-del-1-b


title: [hs1990] mad2-del-1-b


title: [hs1990] mag2-del-1-b


title: [hs1990] lug1-del-3-b


title: [hs1990] mad3-del-1-b


title: [hs1990] lif1-del-1-b


title: [hs1990] mal13-del-1-b


title: [hs1990] mag1-del-1-b


title: [hs1990] lys14-del-1-a


title: [hs1990] lin1-del-2-b


title: [hs1990] lys14-del-1-b


title: [hs1990] lug1-del-3-a


title: [hs1990] lin1-del-1-a


title: [hs1990] mag2-del-1-a


title: [hs1990] mae1-del-1-b


title: [hs1990] lap3-del-1-b


title: [hs1990] kip2-del-1-a


title: [hs1990] lee1-del-1-c


title: [hs1990] kip1-del-1-a


title: [hs1990] lcl3-del-1-a


title: [hs1990] kip3-del-1-a


title: [hs1990] kar5-del-1-a


title: [hs1990] kar4-del-1-a


title: [hs1990] lte1-del-1-b


title: [hs1990] kar4-del-1-b


title: [hs1990] lhp1-del-1-a


title: [hs1990] kar5-del-1-b


title: [hs1990] kap114-del-1-d


title: [hs1990] jsn1-del-1-a


title: [hs1990] jem1-del-1-a


title: [hs1990] isy1-del-1-a


title: [hs1990] imh1-del-1-b


title: [hs1990] iml3-del-1-b


title: [hs1990] imh1-del-1-a


title: [hs1990] ime1-del-1-b


title: [hs1990] hul5-del-2-a


title: [hs1990] irc20-del-1-b


title: [hs1990] hub1-del-1-b


title: [hs1990] ino1-del-1-b


title: [hs1990] hul5-del-2-b


title: [hs1990] hug1-del-1-a


title: [hs1990] irc20-del-1-a


title: [hs1990] idp2-del-1-a


title: [hs1990] ime4-del-2-b


title: [hs1990] hul4-del-1-a


title: [hs1990] idp3-del-1-a


title: [hs1990] ime4-del-1-a


title: [hs1990] hul4-del-1-b


title: [hs1990] hub1-del-1-a


title: [hs1990] idp3-del-1-b


title: [hs1990] hta2-del-1-a


title: [hs1990] jem1-del-1-b


title: [hs1990] htb2-del-1-a


title: [hs1990] hta2-del-1-b


title: [hs1990] hst4-del-1-b


title: [hs1990] hst4-del-1-a


title: [hs1990] hrd3-del-1-b


title: [hs1990] hst2-del-2-a


title: [hs1990] hsm3-del-1-a


title: [hs1990] hst3-del-1-b


title: [hs1990] hrt3-del-1-b


title: [hs1990] hst3-del-1-a


title: [hs1990] hsn1-del-1-a


title: [hs1990] hrb1-del-1-a


title: [hs1990] hrd3-del-1-a


title: [hs1990] hrd1-del-1-a


title: [hs1990] hrd1-del-1-b


title: [hs1990] hrq1-del-1-b


title: [hs1990] hot1-del-1-b


title: [hs1990] hrt3-del-1-a


title: [hs1990] hrb1-del-1-b


title: [hs1990] hpa2-del-1-b


title: [hs1990] hop1-del-1-b


title: [hs1990] hsn1-del-1-b


title: [hs1990] hpr5-del-1-a


title: [hs1990] hst2-del-1-b


title: [hs1990] hop2-del-2-b


title: [hs1990] hpa3-del-1-a


title: [hs1990] hms1-del-2-b


title: [hs1990] hms1-del-1-b


title: [hs1990] hop2-del-2-a


title: [hs1990] hmg1-del-2-b


title: [hs1990] kap114-del-1-c


title: [hs1990] hpa2-del-1-a


title: [hs1990] hcm1-del-1-b


title: [hs1990] hcs1-del-1-b


title: [hs1990] ham1-del-1-b


title: [hs1990] hho1-del-1-c


title: [hs1990] hac1-del-1-b


title: [hs1990] hht2-del-1-b


title: [hs1990] hcm1-del-1-a


title: [hs1990] gts1-del-1-a


title: [hs1990] grx4-del-1-b


title: [hs1990] grx4-del-1-a


title: [hs1990] gsm1-del-1-a


title: [hs1990] grx3-del-1-b


title: [hs1990] gts1-del-1-b


title: [hs1990] gpt2-del-1-a


title: [hs1990] grx2-del-1-b


title: [hs1990] gis2-del-1-a


title: [hs1990] gga1-del-1-a


title: [hs1990] gis3-del-1-b


title: [hs1990] glt1-del-1-a


title: [hs1990] grx3-del-1-a


title: [hs1990] gga1-del-1-b


title: [hs1990] gis3-del-1-a


title: [hs1990] gis2-del-1-b


title: [hs1990] grx2-del-1-a


title: [hs1990] gsp2-del-1-b


title: [hs1990] haa1-del-1-b


title: [hs1990] haa1-del-1-a


title: [hs1990] gfd1-del-1-a


title: [hs1990] gea1-del-1-b


title: [hs1990] grh1-del-1-b


title: [hs1990] gcn2-del-3-b


title: [hs1990] gfd1-del-1-b


title: [hs1990] gcn20-del-1-b


title: [hs1990] gbp2-del-1-a


title: [hs1990] gcn2-del-3-a


title: [hs1990] gat1-del-1-b


title: [hs1990] gbp2-del-1-b


title: [hs1990] gat4-del-1-d


title: [hs1990] gat3-del-1-a


title: [hs1990] gat3-del-1-b


title: [hs1990] gat1-del-1-a


title: [hs1990] fyv6-del-1-a


title: [hs1990] gap1-del-1-a


title: [hs1990] gcn1-del-1-a


title: [hs1990] gal4-del-1-b


title: [hs1990] fks3-del-1-a


title: [hs1990] gal3-del-1-d


title: [hs1990] fun30-del-1-a


title: [hs1990] gap1-del-1-b


title: [hs1990] fpr4-del-1-a


title: [hs1990] fob1-del-1-a


title: [hs1990] fpr3-del-1-b


title: [hs1990] fkh2-del-2-b


title: [hs1990] fap1-del-1-b


title: [hs1990] fir1-del-1-a


title: [hs1990] fkh2-del-1-a


title: [hs1990] far1-del-1-b


title: [hs1990] faa4-del-1-b


title: [hs1990] est2-del-2-b


title: [hs1990] flc2-del-1-a


title: [hs1990] far1-del-1-a


title: [hs1990] ert1-del-1-b


title: [hs1990] irc5-del-1-b


title: [hs1990] est2-del-1-a


title: [hs1990] esc1-del-1-a


title: [hs1990] ert1-del-1-a


title: [hs1990] fap1-del-1-a


title: [hs1990] eri1-del-2-a


title: [hs1990] egd2-del-1-a


title: [hs1990] egd1-del-2-a


title: [hs1990] egd1-del-1-b


title: [hs1990] edc2-del-1-b


title: [hs1990] eds1-del-1-a


title: [hs1990] eri1-del-2-b


title: [hs1990] dus3-del-2-a


title: [hs1990] edc3-del-1-b


title: [hs1990] edc2-del-1-a


title: [hs1990] duf1-del-1-b


title: [hs1990] dyn1-del-1-a


title: [hs1990] ecm32-del-1-b


title: [hs1990] ecm23-del-3-b


title: [hs1990] ecm32-del-1-a


title: [hs1990] duf1-del-1-a


title: [hs1990] ecm2-del-1-b


title: [hs1990] ecm22-del-1-b


title: [hs1990] ecm1-del-1-b


title: [hs1990] esc1-del-1-b


title: [hs1990] dsk2-del-1-b


title: [hs1990] ecm23-del-3-a


title: [hs1990] dsk2-del-1-a


title: [hs1990] edc3-del-1-a


title: [hs1990] dse2-del-1-a


title: [hs1990] dse2-del-1-b


title: [hs1990] dot1-del-2-a


title: [hs1990] dot5-del-1-b


title: [hs1990] dus3-del-2-b


title: [hs1990] dnl4-del-1-a


title: [hs1990] don1-del-1-b


title: [hs1990] dmc1-del-1-b


title: [hs1990] ddi1-del-2-b


title: [hs1990] ddc1-del-1-a


title: [hs1990] der1-del-1-b


title: [hs1990] din7-del-1-a


title: [hs1990] dcr2-del-1-a


title: [hs1990] don1-del-1-a


title: [hs1990] der1-del-1-a


title: [hs1990] dcs2-del-1-a


title: [hs1990] dia1-del-1-a


title: [hs1990] dcn1-del-1-b


title: [hs1990] das1-del-2-b


title: [hs1990] dal82-del-1-b


title: [hs1990] dcr2-del-1-b


title: [hs1990] dia1-del-1-b


title: [hs1990] dcn1-del-1-a


title: [hs1990] ddi1-del-2-a


title: [hs1990] cwc27-del-1-a


title: [hs1990] dal82-del-1-a


title: [hs1990] fir1-del-1-b


title: [hs1990] dal80-del-1-d


title: [hs1990] dbp1-del-1-b


title: [hs1990] dal80-del-1-b


title: [hs1990] cul3-del-1-b


title: [hs1990] cus2-del-1-a


title: [hs1990] cwc21-del-1-b


title: [hs1990] dak1-del-1-a


title: [hs1990] cwc15-del-1-a


title: [hs1990] cul3-del-1-a


title: [hs1990] cwc15-del-2-b


title: [hs1990] cup2-del-1-a


title: [hs1990] cue5-del-1-b


title: [hs1990] cyc3-del-1-b


title: [hs1990] egd2-del-1-b


title: [hs1990] cue3-del-1-b


title: [hs1990] cue5-del-1-a


title: [hs1990] cus2-del-2-a


title: [hs1990] cue3-del-1-a


title: [hs1990] cue4-del-2-b


title: [hs1990] ctl1-del-1-b


title: [hs1990] cue4-del-2-a


title: [hs1990] cth1-del-1-b


title: [hs1990] cst9-del-2-b


title: [hs1990] cue2-del-2-b


title: [hs1990] cue2-del-2-a


title: [hs1990] cth2-del-1-b


title: [hs1990] cth2-del-1-a


title: [hs1990] cst9-del-2-a


title: [hs1990] crz1-del-1-b


title: [hs1990] csn12-del-1-b


title: [hs1990] ctf3-dell-1-a


title: [hs1990] csn12-del-1-a


title: [hs1990] crt10-del-1-b


title: [hs1990] csn9-del-1-b


title: [hs1990] csi1-del-1-b


title: [hs1990] cpd1-del-1-b


title: [hs1990] crp1-del-1-b


title: [hs1990] crn1-del-1-b


title: [hs1990] cos111-del-1-a


title: [hs1990] csn9-del-1-a


title: [hs1990] cnb1-del-1-a


title: [hs1990] csr2-del-1-b


title: [hs1990] csm2-del-1-b


title: [hs1990] crf1-del-1-d


title: [hs1990] cnn1-del-1-b


title: [hs1990] cnb1-del-1-b


title: [hs1990] clu1-del-1-b


title: [hs1990] crn1-del-1-a


title: [hs1990] cms1-del-1-a


title: [hs1990] cln1-del-1-a


title: [hs1990] clb4-del-1-a


title: [hs1990] clb4-del-1-b


title: [hs1990] csi1-del-1-a


title: [hs1990] crt10-del-1-a


title: [hs1990] cos111-del-1-b


title: [hs1990] cin4-del-1-b


title: [hs1990] cin2-del-1-b


title: [hs1990] clg1-del-1-b


title: [hs1990] cms1-del-1-b


title: [hs1990] cpt1-del-1-b


title: [hs1990] chz1-del-2-b


title: [hs1990] das1-del-2-a


title: [hs1990] cin4-del-1-a


title: [hs1990] clg1-del-2-a


title: [hs1990] clb3-del-1-a


title: [hs1990] bye1-del-2-b


title: [hs1990] cex1-del-1-b


title: [hs1990] bye1-del-2-a


title: [hs1990] cex1-del-1-a


title: [hs1990] chf2-del-1-a


title: [hs1990] chl4-del-1-b


title: [hs1990] cad1-del-1-b


title: [hs1990] bsd2-del-2-a


title: [hs1990] chf2-del-1-b


title: [hs1990] bsd2-del-2-b


title: [hs1990] clb6-del-1-b


title: [hs1990] bul2-del-2-a


title: [hs1990] bud6-del-1-b


title: [hs1990] caf120-del-1-a


title: [hs1990] bub2-del-1-b


title: [hs1990] bsp1-del-1-a


title: [hs1990] bul2-del-2-b


title: [hs1990] bna5-del-1-b


title: [hs1990] bmh2-del-3-b


title: [hs1990] bna5-del-1-a


title: [hs1990] bmh2-del-3-a


title: [hs1990] bck2-del-1-b


title: [hs1990] bck2-del-1-a


title: [hs1990] blm10-del-1-a


title: [hs1990] bit61-del-1-a


title: [hs1990] bfa1-del-1-a


title: [hs1990] atg9-del-1-a


title: [hs1990] atg9-del-1-b


title: [hs1990] atg8-del-1-b


title: [hs1990] bdf2-del-1-b


title: [hs1990] atg7-del-1-a


title: [hs1990] atg8-del-1-a


title: [hs1990] atg5-del-1-a


title: [hs1990] atg4-del-1-b


title: [hs1990] atg29-del-1-a


title: [hs1990] atg3-del-1-b


title: [hs1990] atg3-del-1-a


title: [hs1990] atg27-del-1-b


title: [hs1990] atg31-del-1-a


title: [hs1990] atg7-del-1-b


title: [hs1990] atg6-del-1-b


title: [hs1990] atg4-del-1-a


title: [hs1990] atg31-del-1-b


title: [hs1990] atg5-del-1-b


title: [hs1990] atg20-del-1-b


title: [hs1990] atg6-del-1-a


title: [hs1990] atg20-del-1-a


title: [hs1990] atg19-del-1-b


title: [hs1990] atg17-del-2-b


title: [hs1990] atg27-del-1-a


title: [hs1990] atg17-del-2-a


title: [hs1990] atg16-del-1-a


title: [hs1990] atg16-del-1-b


title: [hs1990] atg13-del-1-b


title: [hs1990] atg19-del-1-a


title: [hs1990] atg2-del-1-b


title: [hs1990] atg13-del-1-a


title: [hs1990] atg12-del-1-a


title: [hs1990] asr1-del-2-a


title: [hs1990] asm4-del-2-a


title: [hs1990] asr1-del-2-b


title: [hs1990] asg1-del-2-a


title: [hs1990] asi1-del-2-b


title: [hs1990] arg5,6-del-1-b


title: [hs1990] asi1-del-2-a


title: [hs1990] arr1-del-1-b


title: [hs1990] ama1-del-3-a


title: [hs1990] apn1-del-2-b


title: [hs1990] aly1-del-1-a


title: [hs1990] air1-del-1-a


title: [hs1990] asf2-del-1-b


title: [hs1990] aro3-del-1-b


title: [hs1990] air1-del-1-b


title: [hs1990] aro80-del-1-a


title: [hs1990] aly1-del-1-b


title: [hs1990] asi3-del-1-a


title: [hs1990] arr1-del-1-a


title: [hs1990] air2-del-1-a


title: [hs1990] ama1-del-3-b


title: [hs1990] asi3-del-1-b


title: [hs1990] apn1-del-1-a


title: [hs1990] air2-del-1-b


title: [hs1990] aft2-del-1-a


title: [hs1990] asg1-del-1-b


title: [hs1990] aif1-del-1-b


title: [hs1990] ahc1-del-2-b


title: [hs1990] acm1-del-1-b


title: [hs1990] ack1-del-1-b


title: [hs1990] acs1-del-1-b


title: wt-tm010-b

data_processing: genes, no bg corr, dye corr

source_name: wt

tag: strainorline

value: wt


title: [hs1990] ack1-del-1-a


title: wt-tls004-b_2


title: [hs1990] aca1-del-1-b


title: wt-tls042-a


title: wt-tl050-b


title: [hs1990] acm1-del-1-a


title: shE2A Replicate 3

city: Cambridge

first: Felicia

last: Ng

address: Wellcome Trust/MRC Building, Addenbrooke's Hospital, Hills Road

institute: Cambridge Institute for Medical Research

description: Replicate 3

scan_protocol: Standard Illumina scanning protocol

data_processing: Raw data was processed in R by applying a variance stabilizing transformation method from the lumi package.  Probes with detection call ≥ 0.01 in all samples were removed and then the data was quantile normalized.

source_name: bone marrow

label_protocol: RNA samples were amplified using TotalPrep 96-RNA amplification kit (Applied Biosystems/Ambion, Warrington, UK)

growth_protocol: Mast cells were derived from bone marrow cells collected from tibias and femurs of 3- to 5- month old adult mice. Cells were cultured in Iscove’s modified Dulbecco’s medium (IMDM) supplemented with 10% fetal bovine serum (Sigma), 1% penicillin/streptomycin (Sigma), 150 micromolar MTG (Sigma), 10% stem cell factor conditional media from BHK/MKL cells and 10ng/ml of recombinant mIL-3 (Peprotech). Cells were frequently transferred to new flasks to remove adherent cells and experiments were performed after 3 weeks, when cultures were homogenous. Homogeneity of culture was confirmed by presence of FcERI by FACS and toluidine blue staining of cytospins.

extract_protocol: Total RNA was isolated using Tri-Reagent (Sigma-Aldrich, Dorset, UK) according to the manufacturer's instructions. Contaminating genomic DNA was removed by DNAseI treatment with Turbo DNA free (Applied Biosystems/Ambion, Warrington, UK).

value: primary mast cell

tag: shRNA knock down


title: wt-tls009-b


title: wt-tls004-a


title: wt-tls014-a


title: wt-tl047-a


title: shFli1 Replicate 3

description: Replicate 3


title: wt-tm010-a


title: wt-tl043-a


title: wt-tl050-a


title: wt-tl046-b


title: shFli1 Replicate 1

description: Replicate 1


title: wt-tls004-a_2


title: shE2A Replicate 1

description: Replicate 1


title: wt-tl044-b


title: wt-tl039-b


title: shErg Replicate 3

description: Replicate 3

value: shErg


title: shE2A Replicate 2

description: Replicate 2


title: shFli1 Replicate 2

description: Replicate 2


title: wt-tl038-b


title: wt-tl039-a


title: wt-tl038-a


title: wt-tl036-b


title: wt-tl046-a


title: shErg Replicate 1

description: Replicate 1


title: shLmo2 Replicate 1

description: Replicate 1


title: shErg Replicate 2

description: Replicate 2


title: shLmo2 Replicate 2

description: Replicate 2


title: wt-tl034-b


title: wt-tl033-a


title: shGATA2 Replicate 3

description: Replicate 3


title: shLmo2 Replicate 3

description: Replicate 3


title: shPU1 Replicate 1

description: Replicate 1


title: wt-tl036-a


title: wt-tl032-b


title: wt-tl032-a


title: wt-tl037-a


title: shGATA2 Replicate 1

description: Replicate 1


title: shGATA2 Replicate 2

description: Replicate 2


title: shPU1 Replicate 2

description: Replicate 2


title: shPU1 Replicate 3

description: Replicate 3


title: wt-tl029-b


title: shErg rep3

description:
SAMPLE 9
Replicate 3
shRNA knock down

source_name: shErg_bone marrow


title: wt-tl031-a


title: wt-tl037-b


title: shErg rep2

description:
SAMPLE 8
Replicate 2
shRNA knock down


title: [hs1990] atg12-del-1-b


title: shErg rep1

description:
SAMPLE 7
Replicate 1
shRNA knock down


title: wt-tl028-b


title: control rep3

description:
SAMPLE 3
Replicate 3
shRNA knock down

source_name: control_bone marrow

value: control


title: shGata2 rep3

description:
SAMPLE 6
Replicate 3
shRNA knock down

source_name: shGata2_bone marrow


title: wt-tl008-a


title: wt-tl024-a


title: wt-tl023-a


title: wt-tl027-a


title: wt-tl013-b


title: wt-tl002-2-a


title: HDF_OSKM+p53 shRNA KT001_169

city: Kyoto

first: Kazutoshi

last: Takahashi

address: 53 Kawahara-cho, Shogoin, Sakyo-ku

department: Center for iPS Cell Research and Application

country: Japan

institute: Kyoto University

description: Nascent reprogrammed cells derived from human dermal fibroblast by OSKM + p53 shRNA on day 20

hyb_protocol: standard Agilent protocol

scan_protocol: Slides were scanned on the G2565CA Microarray Scanner System (Agilent).

data_processing: GeneSpring GX. Signals were normalized to percentile.

source_name: Nascent reprogrammed cells derived from HDF, day 20, by OSKM + p53 shRNA

label_protocol: standard Agilent protocol

growth_protocol: Primate ESC medium (ReproCELL) supplemented with 4 ng/ml bFGF at 37ºC in a humidified incubator with 5% CO2.

extract_protocol: RNA was prepared using the miRNeasy Purification kit (Qiagen) following the manufacturer's recommendations. RNA was quantified using a NanoDrop-1000 spectrophotometer and quality was monitored with the Agilent 2100 Bioanalyzer (Agilent Technologies).

treatment_protocol: Human somatic cells were transduced with OCT3/4, SOX2, KLF4, c-MYC and p53 shRNA using retrovirus. Then, we collected TRA-1-60 positive cells as nascent reprogrammed cells.

tag: sample group

value: Nascent reprogrammed cells


title: wt-tl005-b


title: HDF_OSKM+GLIS1 KT001_168

description: Nascent reprogrammed cells derived from human dermal fibroblast by OSKM + GLIS1 on day 20

source_name: Nascent reprogrammed cells derived from HDF, day 20, by OSKM + GLIS1

treatment_protocol: Human somatic cells were transduced with OCT3/4, SOX2, KLF4, c-MYC and GLIS1 using retrovirus. Then, we collected TRA-1-60 positive cells as nascent reprogrammed cells.


title: wt-tl026-a


title: shGata2 rep2

description:
SAMPLE 5
Replicate 2
shRNA knock down


title: wt-thm008-a