title: EL780

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

value: c in pg/ml):NA

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL784

status: Public on Oct 10 2012

type: genomic

city: Vancouver

first: Michael

middle: S.

last: Kobor

state: BC

address: 950 West 28th Avenue

department: Medical Genetics

country: Canada

institute: Centre for Molecular Medicine and Therapeutics / University of British Columbia

description: PBMC sample

hyb_protocol: Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol

scan_protocol: BeadChips were imaged using iScan with standard recommended Illumina scanner setting

data_processing: Raw intensities extracted using GenomeStudio v2010.1. Color correction, background normalization and quantile normalization were done using the standard protocol suggested in the Bioconductor lumi package.

label: Cy3 and Cy5

molecule: genomic DNA

organism: Homo sapiens

source_name: PBMC

label_protocol: Standard Illumina Protocol

extract_protocol: Genomic DNA was isolated using Qiagen AllPrep DNA/RNA mini kit according to manufacturer's instructions

tag: age (y)

tag: gender

value: Male

tag: smoker

value: no

tag: early (low vs. high ses in early life)

value: High

tag: current (low vs. high ses at present)

value: Low

tag: alcohol (drinks per week)

tag: bmi

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

value: European

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL778

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL767

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL779

description: PBMC sample

tag: age (y)

tag: gender

value: Female

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

value: yes

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL777

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

value: Others

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL761.Rep

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL784.Rep

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL770

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: PBMC_nonagenarian 28165

status: Public on Jan 10 2013

type: RNA

city: Tampere

first: Saara

last: Marttila

address: Biokatu 6

department: School of Medicine

country: Finland

institute: University of Tampere

hyb_protocol: 1,500 ng of labeled cRNA was hybridized overnight according to the Illumina protocol

scan_protocol: Beadscan

data_processing: The preprocessing, filtering and analysis of the data were performed with the Chipster v2.0 program (Kallio, M.A., et al. MBC Genomics 12, 507 (2011)).The lumi pipeline was used for data preprocessing and normalization. Array_Address_ID was used as a probe identifier, background correction was performed with the bgAdjust.affy package, and the data were vst transformed and normalized with the rsn method.

label: biotin

molecule: total RNA

source_name: Human PBMC

label_protocol: Labeled cRNA was prepared from 330 ng of total RNA using an Illumina TotalPrep RNA Amplification Kit (Ambion Inc., TX, USA) with overnight incubation according to the manufacturer’s protocol.

growth_protocol: Study subjects did not have any infections or received any vaccinations in the 30 (nonagenarians) or 14 (young controls) days prior to blood sample collection

extract_protocol: RNA was purified using an miRNeasy mini kit (Qiagen, CA, USA) according to the manufacturer`s protocol using on-column DNase digestion (AppliChem GmbH, Darmstadt, Germany)

treatment_protocol: Blood was collected to EDTA-containing tubes between 8 and 12 am. Leucocytes were separated with a density gradient and stored in RNAlater.

tag: tissue

value: PBMC

tag: age

tag: Sex

tag: cmv serostatus

value: pos.

tag: cf-dna (ug/ml)

tag: cmv titer


title: EL775

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL765

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

value: c in pg/ml):38

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL764

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL781

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL773

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL782

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL762.Rep

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL771

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL776

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL761

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL768

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL762

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL769

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL759

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL774

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL763

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL757

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL758

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

value: c in pg/ml):578

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL755

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL760

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL754.Rep

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL755.Rep

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL754

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL752

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL744

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL749

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL742

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL747

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

value: c in pg/ml):586

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL751

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL737

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL735

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL743

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL733

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL753

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL732

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

value: c in pg/ml):620

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL736

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL734

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL727

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL730

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

value: c in pg/ml):53.8

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL801

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL783

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL729

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL724

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL726

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

value: c in pg/ml):125

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL731

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL725

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL741

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL728

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL721

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL750

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

value: c in pg/ml):163

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL702

description: PBMC sample

tag: age (y)

tag: gender

value: Male

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL718

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

value: no

tag: ethnicity (caucasian or other ethnicity)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: Bisulfite-Seq analysis of RRBS_Lib 118 and 122 derived from human chondrogenic dif cells; RRBS_Lib 118 and RRBS_Lib 122

status: Public on Oct 03 2012

type: SRA

city: Cambridge

first: BROAD

last: INSTITUTE

state: MA

country: USA

institute: Broad Institute

description:
sample_term_id: CL_0000138
assay_term_id: OBI_0001862
nucleic_acid_term_id: SO_0000352
Design description: RRBS REMC Sequencing on Illumina
Library name: RRBS_Lib 118 and RRBS_Lib 122
EDACC Genboree Experiment Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FEXPERIMENT%2FEDACC.11787
EDACC Genboree Sample Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FSAMPLE%2FEDACC.5935
****************
For data usage terms and conditions, please refer to:
http://www.drugabuse.gov/funding/funding-opportunities/nih-common-fund/epigenomics-data-access-policies
****************

library_source: genomic

data_processing:
**********************************************************************

ANALYSIS FILE NAME: GSM916092_BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.RRBS.59.wig
ANALYSIS CENTER: EDACC
ANALYSIS ALIAS: RRBS_Lib 118-RRBS_Lib 122.hg19.level.2.release.8
ANALYSIS TITLE: Methylation Proportion Graphs of Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Data
ANALYSIS DESCRIPTION: Illumina RRBS read mappings from Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells, Donor 59 were processed into graphs of methylation proportions. Methylation proportions were calculated as (methylated calls / (methylated calls + unmethylated calls)) for all CpGs covered by at least 4 reads.
ANALYSIS TYPE: ABUNDANCE_MEASUREMENT
EDACC Genboree Analysis Page: http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FEDACC%2FANALYSIS%2FEDACC.13902
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Reduced Representation Bisulfite-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 MspI restriction fragments 40-220bp
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
GENOMIC_WINDOW: 2bp containing CpGs
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: CfBMDMSC RRBS 59 18
BROWSER_TRACK_DESCRIPTION: BI Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Donor 59 Library RRBS_Lib 118 and RRBS_Lib 122 EA Release 8

QUALITY SCORES:
NUMBER_OF_MAPPED_READS: 71,872,171
NUMBER_OF_RRBS_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 13
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS: 99.85
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS_PERCENTILE: 100
MAXIMUM_REPLICATE_CORRELATION: 0.92

**********************************************************************

source_name: chondrocytes derived via in vitro culture from mesenchymal stem cells; RRBS_Lib 118 and RRBS_Lib 122

extract_protocol: Library construction protocol: Smith et al., Methods 48, 226-232

tag: sample alias

tag: sample common name

value: healthy

tag: molecule

value: genomic DNA

tag: disease

tag: markers

value: Medium:NA; Differentiation Method:alginate hydrogel scaffold (SR Herlofsen et al, Tissue Eng Part A. 2011)

value: chondrogenic dif cells

value: Unknown

value: Primary Cell Culture

value: Rikshospitalet University Hospital

value: 2x5hrs Epitect Kit

value: T4 Ligase (2,000U/ul) 16C o/n

value: Illumina TruSeq adapter

value: Illumina TruSeq primer

value: Standard Protocol (Smith et al., Methods 48, 226-232)

value: DNA Methylation

value: Smith et al., Methods 48, 226-232

value: SPRI Beads

value: Illumina TruSeq primer pair

value: Pfu Turbo Cx hot start


title: Bisulfite-Seq analysis of RRBS_Lib 117 and 121 derived from human chondrogenic dif cells; RRBS_Lib 117 and RRBS_Lib 121

description:
sample_term_id: CL_0000138
assay_term_id: OBI_0001862
nucleic_acid_term_id: SO_0000352
Design description: RRBS REMC Sequencing on Illumina
Library name: RRBS_Lib 117 and RRBS_Lib 121
EDACC Genboree Experiment Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FEXPERIMENT%2FEDACC.11783
EDACC Genboree Sample Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FSAMPLE%2FEDACC.5951
****************
For data usage terms and conditions, please refer to:
http://www.drugabuse.gov/funding/funding-opportunities/nih-common-fund/epigenomics-data-access-policies
****************

data_processing:
**********************************************************************

ANALYSIS FILE NAME: GSM916088_BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.RRBS.58.wig
ANALYSIS CENTER: EDACC
ANALYSIS ALIAS: RRBS_Lib 117-RRBS_Lib 121.hg19.level.2.release.8
ANALYSIS TITLE: Methylation Proportion Graphs of Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Data
ANALYSIS DESCRIPTION: Illumina RRBS read mappings from Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells, Donor 58 were processed into graphs of methylation proportions. Methylation proportions were calculated as (methylated calls / (methylated calls + unmethylated calls)) for all CpGs covered by at least 4 reads.
ANALYSIS TYPE: ABUNDANCE_MEASUREMENT
EDACC Genboree Analysis Page: http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FEDACC%2FANALYSIS%2FEDACC.13901
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Reduced Representation Bisulfite-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 MspI restriction fragments 40-220bp
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
GENOMIC_WINDOW: 2bp containing CpGs
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: CfBMDMSC RRBS 58 17
BROWSER_TRACK_DESCRIPTION: BI Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Donor 58 Library RRBS_Lib 117 and RRBS_Lib 121 EA Release 8

QUALITY SCORES:
NUMBER_OF_MAPPED_READS: 57,987,200
NUMBER_OF_RRBS_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 13
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS: 99.83
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS_PERCENTILE: 92
MAXIMUM_REPLICATE_CORRELATION: 0.9

**********************************************************************

source_name: chondrocytes derived via in vitro culture from mesenchymal stem cells; RRBS_Lib 117 and RRBS_Lib 121

value: healthy


title: Bisulfite-Seq analysis of RRBS_Lib 116 and 120 derived from human chondrogenic dif cells; RRBS_Lib 116 and RRBS_Lib 120

description:
sample_term_id: CL_0000138
assay_term_id: OBI_0001862
nucleic_acid_term_id: SO_0000352
Design description: RRBS REMC Sequencing on Illumina
Library name: RRBS_Lib 116 and RRBS_Lib 120
EDACC Genboree Experiment Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FEXPERIMENT%2FEDACC.11778
EDACC Genboree Sample Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FSAMPLE%2FEDACC.5949
****************
For data usage terms and conditions, please refer to:
http://www.drugabuse.gov/funding/funding-opportunities/nih-common-fund/epigenomics-data-access-policies
****************

data_processing:
**********************************************************************

ANALYSIS FILE NAME: GSM916083_BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.RRBS.57.wig
ANALYSIS CENTER: EDACC
ANALYSIS ALIAS: RRBS_Lib 116-RRBS_Lib 120.hg19.level.2.release.8
ANALYSIS TITLE: Methylation Proportion Graphs of Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Data
ANALYSIS DESCRIPTION: Illumina RRBS read mappings from Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells, Donor 57 were processed into graphs of methylation proportions. Methylation proportions were calculated as (methylated calls / (methylated calls + unmethylated calls)) for all CpGs covered by at least 4 reads.
ANALYSIS TYPE: ABUNDANCE_MEASUREMENT
EDACC Genboree Analysis Page: http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FEDACC%2FANALYSIS%2FEDACC.13900
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Reduced Representation Bisulfite-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 MspI restriction fragments 40-220bp
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
GENOMIC_WINDOW: 2bp containing CpGs
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: CfBMDMSC RRBS 57 16
BROWSER_TRACK_DESCRIPTION: BI Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Donor 57 Library RRBS_Lib 116 and RRBS_Lib 120 EA Release 8

QUALITY SCORES:
NUMBER_OF_MAPPED_READS: 36,445,038
NUMBER_OF_RRBS_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 13
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS: 99.83
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS_PERCENTILE: 92
MAXIMUM_REPLICATE_CORRELATION: 0.89

**********************************************************************

source_name: chondrocytes derived via in vitro culture from mesenchymal stem cells; RRBS_Lib 116 and RRBS_Lib 120

value: genomic DNA


title: Bisulfite-Seq analysis of RRBS_Lib 140 and RRBS_Lib 136 derived from human BM-MSC cells; RRBS_Lib 140 and RRBS_Lib 136

description:
sample_term_id: EFO_0000586
assay_term_id: OBI_0001862
nucleic_acid_term_id: SO_0000352
Design description: RRBS REMC Sequencing on Illumina
Library name: RRBS_Lib 140 and RRBS_Lib 136
EDACC Genboree Experiment Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FEXPERIMENT%2FEDACC.11786
EDACC Genboree Sample Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FSAMPLE%2FEDACC.5948
****************
For data usage terms and conditions, please refer to:
http://www.drugabuse.gov/funding/funding-opportunities/nih-common-fund/epigenomics-data-access-policies
****************

data_processing:
**********************************************************************

ANALYSIS FILE NAME: GSM916091_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.RRBS.59.wig
ANALYSIS CENTER: EDACC
ANALYSIS ALIAS: RRBS_Lib 140-RRBS_Lib 136.hg19.level.2.release.8
ANALYSIS TITLE: Methylation Proportion Graphs of Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Data
ANALYSIS DESCRIPTION: Illumina RRBS read mappings from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells, Donor 59 were processed into graphs of methylation proportions. Methylation proportions were calculated as (methylated calls / (methylated calls + unmethylated calls)) for all CpGs covered by at least 4 reads.
ANALYSIS TYPE: ABUNDANCE_MEASUREMENT
EDACC Genboree Analysis Page: http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FEDACC%2FANALYSIS%2FEDACC.13908
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Reduced Representation Bisulfite-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 MspI restriction fragments 40-220bp
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
GENOMIC_WINDOW: 2bp containing CpGs
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: BMDMSC RRBS 59 36
BROWSER_TRACK_DESCRIPTION: BI Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Donor 59 Library RRBS_Lib 136 and RRBS_Lib 140 EA Release 8

QUALITY SCORES:
NUMBER_OF_MAPPED_READS: 128,444,247
NUMBER_OF_RRBS_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 13
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS: 99.78
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS_PERCENTILE: 69
MAXIMUM_REPLICATE_CORRELATION: 0.79

**********************************************************************

source_name: bone marrow was aspirated from the iliac crest, isolated by density gradient and adhesion to plastic, and expanded in monolayer culture, containing 10% FBS; RRBS_Lib 140 and RRBS_Lib 136

value: BM-MSC


title: EL715

description: PBMC sample

tag: age (y)

tag: gender

value: Female

tag: smoker

value: no

tag: early (low vs. high ses in early life)

value: Low

tag: current (low vs. high ses at present)

value: High

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

value: yes

value: Others

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: EL712

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

value: European

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

value: c in pg/ml):230

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)


title: EL723

description: PBMC sample

tag: age (y)

tag: gender

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)

tag: wbc count (total white blood cells per 10(9) liter/blood)

tag: neutrophils (neutrophils per 10(9) liter/blood)

tag: lymphocytes (lymphocytes per 10(9) liter/blood)

tag: monocytes (monocytes per 10(9) liter/blood)

tag: basophils (basophils per 10(9) liter/blood)

tag: eosinophils (eosinophils per 10(9) liter/blood)

tag: neutrophil% (percent of wbc that are neutrophils)

tag: lymphocyte% (percent of wbc that are lymphocytes)

tag: monocyte% (percent of wbc that are monocytes)

tag: basophil% (percent of wbc that are basophils)

tag: eosinophil% (percent of wbc that are eosinoophils)


title: Bisulfite-Seq analysis of RRBS_Lib 141 and RRBS_Lib 137 derived from human BM-MSC cells; RRBS_Lib 141 and RRBS_Lib 137

description:
sample_term_id: EFO_0000586
assay_term_id: OBI_0001862
nucleic_acid_term_id: SO_0000352
Design description: RRBS REMC Sequencing on Illumina
Library name: RRBS_Lib 141 and RRBS_Lib 137
EDACC Genboree Experiment Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FEXPERIMENT%2FEDACC.11776
EDACC Genboree Sample Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FSAMPLE%2FEDACC.5950
****************
For data usage terms and conditions, please refer to:
http://www.drugabuse.gov/funding/funding-opportunities/nih-common-fund/epigenomics-data-access-policies
****************

data_processing:
**********************************************************************

ANALYSIS FILE NAME: GSM916081_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.RRBS.60.wig
ANALYSIS CENTER: EDACC
ANALYSIS ALIAS: RRBS_Lib 141-RRBS_Lib 137.hg19.level.2.release.8
ANALYSIS TITLE: Methylation Proportion Graphs of Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Data
ANALYSIS DESCRIPTION: Illumina RRBS read mappings from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells, Donor 60 were processed into graphs of methylation proportions. Methylation proportions were calculated as (methylated calls / (methylated calls + unmethylated calls)) for all CpGs covered by at least 4 reads.
ANALYSIS TYPE: ABUNDANCE_MEASUREMENT
EDACC Genboree Analysis Page: http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FEDACC%2FANALYSIS%2FEDACC.13909
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Reduced Representation Bisulfite-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 MspI restriction fragments 40-220bp
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
GENOMIC_WINDOW: 2bp containing CpGs
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: BMDMSC RRBS 60 37
BROWSER_TRACK_DESCRIPTION: BI Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells RRBS Donor 60 Library RRBS_Lib 137 and RRBS_Lib 141 EA Release 8

QUALITY SCORES:
NUMBER_OF_MAPPED_READS: 90,036,012
NUMBER_OF_RRBS_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 13
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS: 99.79
BISULFITE_CONVERSION_PERCENTAGE_BASED_ON_MAPPINGS_PERCENTILE: 77
MAXIMUM_REPLICATE_CORRELATION: 0.79

**********************************************************************

source_name: bone marrow was aspirated from the iliac crest, isolated by density gradient and adhesion to plastic, and expanded in monolayer culture, containing 10% FBS; RRBS_Lib 141 and RRBS_Lib 137

tag: sample alias

tag: sample common name

tag: molecule

tag: disease

tag: markers

value: Unknown

value: Primary Cell Culture

value: Rikshospitalet University Hospital

value: 2x5hrs Epitect Kit

value: T4 Ligase (2,000U/ul) 16C o/n

value: Illumina TruSeq adapter

value: Illumina TruSeq primer

value: Standard Protocol (Smith et al., Methods 48, 226-232)


title: EL709

description: PBMC sample

tag: age (y)

tag: gender

value: Male

tag: smoker

tag: early (low vs. high ses in early life)

tag: current (low vs. high ses at present)

tag: alcohol (drinks per week)

tag: bmi

tag: exercise (minutes per week)

tag: stress (perceived stress scale questionnaire)

tag: depression (center for epidemiologic studies depression scale)

tag: sleep (perceived quality; pittsburgh sleep quality index)

tag: birth control (current use of oral contraceptives)

tag: ethnicity (caucasian or other ethnicity)

tag: pbimw (measures of recalled maternal warmth based on a questionnaire called the parental bonding inventory)

tag: pbifw (measures of recalled paternal warmth based on a questionnaire called the parental bonding inventory)

tag: total cortisol  (total cortisol release over 3 days in arbitrary units)

tag: dslope (diurnal rhythm of cortisol in arbitrary units)

tag: pam3csk4 (il-6 response to pam3csk4 in pg/ml)

tag: pgn (il6 response to peptidoglycan in pg/ml)

tag: pic (il6 response to ppoly i

value: c in pg/ml):79

tag: lps (il6 response to lipopolysaccharide in pg/ml)

tag: flagellin (il6 response to flagelin in pg/ml)

tag: zymosan (il6 response to zymosan in pg/ml)

tag: ssr (il6 response to single-stranded rna in pg/ml)

tag: imiquimod (il6 response to imiquimod in pg/ml)

tag: odn (il6 response to oligodeoxyribonucleotide in pg/ml)

tag: il1b (il6 response to interleukin-1b in pg/ml)

tag: pma (il6 response to phorbol-12-myristate-13-acetatein pg/ml)