title: Patient #187, Day 0

description: gene expression data at Day 0


title: Patient #191, Day 0

status: Public on May 26 2016

type: RNA

city: Singapore

first: Allen Eng Juh

last: Yeoh

address: 14 Medical Drive, MD6 #09-02

department: Paediatrics

country: Singapore

institute: National University of Singapore

description: gene expression data at Day 0

hyb_protocol: Hybridization step was performed according to the Affymetrix 3' IVT PLUS Reagent Kit User Manual. Following fragmentation, 11 ug of cRNA were hybridized for 16 hr at 45C on GeneChip HG-U133A or -U133 Plus 2.0 array.

scan_protocol: Arrays were washed and stained using the Affymetrix Fluidics Station 450, and scanned using the GeneChip Scanner 3000 7G accroding to the manufacturer's instruction.

data_processing: Gene expression signal intensities were interrogated using the Affymetrix Expression Console software. Expression values were scaled to the target of 500 within the 22,277 probe sets that are common to both platforms. To reduce noise, a probe set was only retained if it is present in >30% of the samples. The remaining probe sets were then log transformed and quantile normalized.

label: biotin

molecule: total RNA

organism: Homo sapiens

source_name: bone marrow sample from child with acute lymphoblastic leukemia

label_protocol: Labeling step was performed according to the Affymetrix 3' IVT PLUS Reagent Kit User Manual.

extract_protocol: Total RNA was isolated using TRIzol reagent and purified using RNeasy Mini Kit according to respective manufacturer's instruction.

tag: diagnosis

value: acute lymphoblastic leukemia

tag: tissue

value: bone marrow

tag: time point

value: Day 0

tag: patient id

tag: dataset

value: Test set


title: Patient #188, Day 0

description: gene expression data at Day 0


title: Patient #187, Day 8

description: gene expression data at Day 8

value: Day 8


title: Patient #183, Day 0

description: gene expression data at Day 0


title: Patient #191, Day 8

description: gene expression data at Day 8


title: Vector replicate 2

status: Public on Jan 13 2017

city: Barcelona

first: William

middle: M

last: Keyes

address: Carrer del Dr. Aiguader, 88

department: Gene Regulation, Stem Cells and Cancer

country: Spain

institute: Centre for Genomic Regulation (CRG)

hyb_protocol: After fragmentation, 600 ng of labeled cRNA from each sample was hybridized in in situ hybridization oven (Agilent) for 17 h at 65ºC and washed during 1 min at rt in Gene Expression Wash Buffer 1 (Agilent) and 1 min at 37 ºC with Gene Expression Wahs buffer 2 (Agilent).

scan_protocol: Scanned on an Agilent G2539A scanner at 3um resolution and 100%PMT. The intensity data of each individual hybridization were extracted and the quality was assessed with the Feature Extraction software 10.7 (Agilent). The intensity data of each individual hybridization were extracted and the quality was assessed with the Feature Extraction software 10.7 (Agilent).

data_processing: Raw data was corrected for background noise using the normexp method. Quantile normalization was applied to assure comparability across samples.

organism: Mus musculus

source_name: primary mouse keratinocytes

label_protocol: Cyanine-3 (Cy3) labeled cRNA was prepared from 100ng of total RNA using the LowInputQuick Amp Labeling kit – Agilent 5190-2305 according to the manufacturer's instructions, followed by RNAeasy column purification (QIAGEN, Valencia, CA).  Dye incorporation and cRNA yield were checked with the NanoDrop ND-1000 Spectrophotometer.

extract_protocol: Total RNA was isolated 6 days post infection using an RNA-easy mini RNA extraction kit (Qiagen).

tag: agent

value: empty vector (MSCV)

tag: cell type

value: primary mouse keratinocytes


title: Patient #186, Day 8

description: gene expression data at Day 8


title: Patient #189, Day 8

description: gene expression data at Day 8


title: meningioma sample Jed88_MN

status: Public on Nov 01 2016

city: Jeddah

first: Hans-Juergen

last: Schulten

department: Center of Excellence in Genomic Medicine Research

country: Saudi Arabia

institute: King Abdulaziz University

description: Gene expression data from primary brain tumor

hyb_protocol: Following fragmentation, 6 ug of cDNA were hybridized for 17 hr at 45C on GeneChip HuGene-1.0-st arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G.

data_processing: Data were generated using the Affymetrix Expression Console Software using Affymetrix default analysis settings.

source_name: meningioma, secretory histology histology

label_protocol: Biotinylated cRNAs were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

extract_protocol: Total RNA from biospecimens was extracted using the Quagen RNeasy mini kit according to the manufacturer's instructions and integrity of RNA was checked using the Agilent Bioanalyzer.

tag: grade

value: I

tag: gender

value: M


title: Patient #184, Day 8

description: gene expression data at Day 8


title: Patient #184, Day 0

description: gene expression data at Day 0


title: Patient #190, Day 0

description: gene expression data at Day 0


title: meningioma sample Jed04_MN

description: GSE77259_GSM2046757; Gene expression data from primary brain tumor

source_name: meningioma, transitional histology

value: F


title: Patient #186, Day 0

description: gene expression data at Day 0


title: Patient #183, Day 8

description: gene expression data at Day 8


title: Patient #185, Day 0

description: gene expression data at Day 0


title: Patient #185, Day 8

description: gene expression data at Day 8


title: meningioma sample Jed92_MN

source_name: meningioma, meningothelial histology


title: Patient #182, Day 0

description: gene expression data at Day 0


title: Patient #180, Day 8

description: gene expression data at Day 8


title: UPF7U-SC

status: Public on Feb 24 2017

city: Prague 2

first: Vojtěch

last: Kulvait

address: U Nemocnice 5

department: Institute of Pathological Physiology

country: Czech Republic

institute: Charles University in Prague - 1st Faculty of Medicine

hyb_protocol: Standard Illumina protocol

scan_protocol: Standard Illumina protocol

data_processing: Image data was read by beadarray package (there are no detection p-values). Further data processing was performed using blima Bioconductor package. Averaged foreground values GrnF after background correction was used for Matrix non-normalized data.

source_name: Cells established by xenotransplantation of UPF7U cell line isolated ex vivo from subcutaneously growing lymphoma.

label_protocol: Standard Illumina protocol

extract_protocol: RNA extraction using Trizol, as per manufacturer's protocol


title: Patient #177, Day 8

description: gene expression data at Day 8


title: Patient #177, Day 0

description: gene expression data at Day 0


title: Patient #181, Day 8

description: gene expression data at Day 8


title: Patient #182, Day 8

description: gene expression data at Day 8


title: Patient #178, Day 8

description: gene expression data at Day 8


title: Patient #176, Day 8

description: gene expression data at Day 8


title: Patient #176, Day 0

description: gene expression data at Day 0


title: Patient #178, Day 0

description: gene expression data at Day 0


title: Patient #173, Day 0

description: gene expression data at Day 0


title: Patient #179, Day 0

description: gene expression data at Day 0


title: Patient #181, Day 0

description: gene expression data at Day 0


title: Patient #179, Day 8

description: gene expression data at Day 8


title: Patient #172, Day 8

description: gene expression data at Day 8


title: Patient #174, Day 8

description: gene expression data at Day 8


title: Patient #171, Day 8

description: gene expression data at Day 8


title: Patient #172, Day 0

description: gene expression data at Day 0


title: Patient #173, Day 8

description: gene expression data at Day 8


title: Patient #171, Day 0

description: gene expression data at Day 0


title: Patient #180, Day 0

description: gene expression data at Day 0


title: Patient #175, Day 8

description: gene expression data at Day 8


title: Patient #170, Day 0

description: gene expression data at Day 0


title: Patient #169, Day 0

description: gene expression data at Day 0


title: Patient #168, Day 8

description: gene expression data at Day 8


title: Patient #169, Day 8

description: gene expression data at Day 8


title: Patient #174, Day 0

description: gene expression data at Day 0


title: Patient #168, Day 0

description: gene expression data at Day 0


title: Patient #170, Day 8

description: gene expression data at Day 8


title: Patient #167, Day 8

description: gene expression data at Day 8


title: Patient #167, Day 0

description: gene expression data at Day 0


title: Patient #165, Day 0

description: gene expression data at Day 0


title: Patient #165, Day 8

description: gene expression data at Day 8


title: Patient #164, Day 8

description: gene expression data at Day 8


title: Patient #166, Day 0

description: gene expression data at Day 0


title: Patient #161, Day 8

description: gene expression data at Day 8


title: Patient #159, Day 8

description: gene expression data at Day 8


title: Patient #162, Day 8

description: gene expression data at Day 8


title: Patient #156, Day 0

description: gene expression data at Day 0


title: Patient #157, Day 0

description: gene expression data at Day 0

value: Training set


title: Patient #160, Day 8

description: gene expression data at Day 8


title: Patient #166, Day 8

description: gene expression data at Day 8


title: Patient #162, Day 0

description: gene expression data at Day 0


title: Patient #157, Day 8

description: gene expression data at Day 8


title: Patient #161, Day 0

description: gene expression data at Day 0


title: Patient #158, Day 8

description: gene expression data at Day 8


title: Patient #156, Day 8

description: gene expression data at Day 8


title: Patient #153, Day 8

description: gene expression data at Day 8


title: Patient #160, Day 0

description: gene expression data at Day 0


title: Patient #163, Day 8

description: gene expression data at Day 8


title: Patient #159, Day 0

description: gene expression data at Day 0


title: Patient #153, Day 0

description: gene expression data at Day 0


title: Patient #154, Day 8

description: gene expression data at Day 8


title: Patient #155, Day 8

description: gene expression data at Day 8


title: Patient #154, Day 0

description: gene expression data at Day 0


title: Patient #163, Day 0

description: gene expression data at Day 0


title: Patient #155, Day 0

description: gene expression data at Day 0


title: Patient #164, Day 0

description: gene expression data at Day 0


title: Patient #148, Day 8

description: gene expression data at Day 8


title: Patient #149, Day 0

description: gene expression data at Day 0


title: Patient #150, Day 8

description: gene expression data at Day 8


title: Patient #151, Day 8

description: gene expression data at Day 8


title: Patient #146, Day 0

description: gene expression data at Day 0


title: Patient #151, Day 0

description: gene expression data at Day 0


title: Patient #152, Day 0

description: gene expression data at Day 0


title: Patient #150, Day 0

description: gene expression data at Day 0


title: Patient #147, Day 0

description: gene expression data at Day 0


title: Patient #145, Day 8

description: gene expression data at Day 8


title: Patient #147, Day 8

description: gene expression data at Day 8


title: Patient #152, Day 8

description: gene expression data at Day 8


title: Patient #149, Day 8

description: gene expression data at Day 8


title: Patient #148, Day 0

description: gene expression data at Day 0


title: Patient #145, Day 0

description: gene expression data at Day 0


title: Patient #143, Day 0

description: gene expression data at Day 0


title: Patient #139, Day 8

description: gene expression data at Day 8


title: Patient #146, Day 8

description: gene expression data at Day 8


title: Patient #144, Day 0

description: gene expression data at Day 0


title: Patient #141, Day 8

description: gene expression data at Day 8


title: Patient #144, Day 8

description: gene expression data at Day 8


title: Patient #142, Day 0

description: gene expression data at Day 0


title: Patient #139, Day 0

description: gene expression data at Day 0


title: Patient #141, Day 0

description: gene expression data at Day 0


title: Patient #140, Day 0

description: gene expression data at Day 0


title: Patient #138, Day 8

description: gene expression data at Day 8


title: Patient #142, Day 8

description: gene expression data at Day 8


title: Patient #140, Day 8

description: gene expression data at Day 8


title: Patient #136, Day 8

description: gene expression data at Day 8


title: Patient #143, Day 8

description: gene expression data at Day 8


title: Patient #137, Day 8

description: gene expression data at Day 8


title: Patient #135, Day 8

description: gene expression data at Day 8


title: Patient #134, Day 8

description: gene expression data at Day 8


title: Patient #137, Day 0

description: gene expression data at Day 0


title: Patient #136, Day 0

description: gene expression data at Day 0


title: Patient #138, Day 0

description: gene expression data at Day 0


title: Patient #131, Day 8

description: gene expression data at Day 8


title: Patient #130, Day 0

description: gene expression data at Day 0


title: Patient #134, Day 0

description: gene expression data at Day 0

source_name: peripheral blood sample from child with acute lymphoblastic leukemia

value: peripheral blood


title: Patient #125, Day 8

description: gene expression data at Day 8


title: Patient #132, Day 0

description: gene expression data at Day 0


title: Patient #129, Day 8

description: gene expression data at Day 8


title: Patient #132, Day 8

description: gene expression data at Day 8


title: Patient #133, Day 0

description: gene expression data at Day 0


title: Patient #135, Day 0

description: gene expression data at Day 0


title: Patient #126, Day 0

description: gene expression data at Day 0


title: Patient #130, Day 8

description: gene expression data at Day 8


title: Patient #133, Day 8

description: gene expression data at Day 8


title: Patient #129, Day 0

description: gene expression data at Day 0


title: Patient #131, Day 0

description: gene expression data at Day 0


title: Patient #127, Day 0

description: gene expression data at Day 0


title: Patient #126, Day 8

description: gene expression data at Day 8


title: Patient #128, Day 8

description: gene expression data at Day 8


title: Patient #125, Day 0

description: gene expression data at Day 0


title: Patient #124, Day 0

description: gene expression data at Day 0


title: Patient #124, Day 8

description: gene expression data at Day 8


title: Patient #127, Day 8

description: gene expression data at Day 8


title: Patient #175, Day 0

description: gene expression data at Day 0


title: Patient #128, Day 0

description: gene expression data at Day 0


title: Patient #123, Day 8

description: gene expression data at Day 8


title: Patient #123, Day 0

description: gene expression data at Day 0


title: Patient #122, Day 0

description: gene expression data at Day 0


title: Patient #121, Day 8

description: gene expression data at Day 8


title: Patient #122, Day 8

description: gene expression data at Day 8


title: Patient #121, Day 0

description: gene expression data at Day 0


title: Patient #119, Day 0

description: gene expression data at Day 0


title: Patient #115, Day 8

description: gene expression data at Day 8


title: Patient #117, Day 0

description: gene expression data at Day 0


title: Patient #119, Day 8

description: gene expression data at Day 8


title: Patient #118, Day 0

description: gene expression data at Day 0


title: Patient #120, Day 0

description: gene expression data at Day 0


title: Patient #115, Day 0

description: gene expression data at Day 0


title: Patient #120, Day 8

description: gene expression data at Day 8


title: Patient #114, Day 8

description: gene expression data at Day 8


title: Patient #113, Day 8

description: gene expression data at Day 8


title: Patient #111, Day 8

description: gene expression data at Day 8


title: Patient #118, Day 8

description: gene expression data at Day 8


title: Patient #116, Day 8

description: gene expression data at Day 8


title: Patient #113, Day 0

description: gene expression data at Day 0


title: Patient #112, Day 8

description: gene expression data at Day 8


title: Patient #158, Day 0

description: gene expression data at Day 0


title: Patient #112, Day 0

description: gene expression data at Day 0


title: Patient #117, Day 8

description: gene expression data at Day 8


title: Patient #109, Day 8

description: gene expression data at Day 8


title: Patient #111, Day 0

description: gene expression data at Day 0


title: Patient #109, Day 0

description: gene expression data at Day 0


title: Patient #110, Day 0

description: gene expression data at Day 0


title: Patient #116, Day 0

description: gene expression data at Day 0


title: Patient #108, Day 8

description: gene expression data at Day 8


title: Patient #114, Day 0

description: gene expression data at Day 0


title: Patient #107, Day 8

description: gene expression data at Day 8


title: Patient #108, Day 0

description: gene expression data at Day 0


title: Patient #107, Day 0

description: gene expression data at Day 0


title: Patient #103, Day 8

description: gene expression data at Day 8


title: Patient #101, Day 0

description: gene expression data at Day 0


title: Patient #106, Day 0

description: gene expression data at Day 0


title: Patient #104, Day 8

description: gene expression data at Day 8


title: Patient #105, Day 8

description: gene expression data at Day 8


title: Patient #97, Day 8

description: gene expression data at Day 8


title: Patient #97, Day 0

description: gene expression data at Day 0


title: Patient #102, Day 0

description: gene expression data at Day 0


title: Patient #103, Day 0

description: gene expression data at Day 0


title: Patient #100, Day 0

description: gene expression data at Day 0


title: Patient #99, Day 8

description: gene expression data at Day 8


title: Patient #95, Day 8

description: gene expression data at Day 8


title: Patient #101, Day 8

description: gene expression data at Day 8


title: Patient #105, Day 0

description: gene expression data at Day 0


title: Patient #98, Day 0

description: gene expression data at Day 0


title: Patient #102, Day 8

description: gene expression data at Day 8


title: Patient #96, Day 0

description: gene expression data at Day 0


title: Patient #104, Day 0

description: gene expression data at Day 0


title: Patient #100, Day 8

description: gene expression data at Day 8


title: Patient #99, Day 0

description: gene expression data at Day 0


title: Patient #96, Day 8

description: gene expression data at Day 8


title: Patient #95, Day 0

description: gene expression data at Day 0


title: Patient #106, Day 8

description: gene expression data at Day 8


title: Patient #98, Day 8

description: gene expression data at Day 8


title: Patient #93, Day 0

description: gene expression data at Day 0


title: Patient #92, Day 8

description: gene expression data at Day 8


title: Patient #93, Day 8

description: gene expression data at Day 8


title: Patient #92, Day 0

description: gene expression data at Day 0


title: Patient #91, Day 0

description: gene expression data at Day 0


title: Patient #81, Day 0

description: gene expression data at Day 0


title: Patient #89, Day 0

description: gene expression data at Day 0


title: Patient #91, Day 8

description: gene expression data at Day 8


title: Patient #84, Day 0

description: gene expression data at Day 0


title: Patient #80, Day 8

description: gene expression data at Day 8


title: Patient #83, Day 0

description: gene expression data at Day 0


title: Patient #85, Day 8

description: gene expression data at Day 8


title: Patient #78, Day 0

description: gene expression data at Day 0


title: Patient #77, Day 0

description: gene expression data at Day 0


title: Patient #82, Day 0

description: gene expression data at Day 0


title: Patient #85, Day 0

description: gene expression data at Day 0


title: Patient #86, Day 0

description: gene expression data at Day 0


title: Patient #89, Day 8

description: gene expression data at Day 8


title: Patient #81, Day 8

description: gene expression data at Day 8


title: Patient #86, Day 8

description: gene expression data at Day 8


title: Patient #78, Day 8

description: gene expression data at Day 8


title: Patient #84, Day 8

description: gene expression data at Day 8


title: Patient #90, Day 0

description: gene expression data at Day 0


title: Patient #76, Day 0

description: gene expression data at Day 0


title: Patient #76, Day 8

description: gene expression data at Day 8


title: Patient #83, Day 8

description: gene expression data at Day 8


title: Patient #82, Day 8

description: gene expression data at Day 8


title: Patient #77, Day 8

description: gene expression data at Day 8


title: Patient #75, Day 0

description: gene expression data at Day 0


title: Patient #80, Day 0

description: gene expression data at Day 0


title: Patient #73, Day 8

description: gene expression data at Day 8


title: Patient #75, Day 8

description: gene expression data at Day 8


title: Patient #73, Day 0

description: gene expression data at Day 0


title: Patient #70, Day 8

description: gene expression data at Day 8


title: Patient #68, Day 8

description: gene expression data at Day 8


title: Patient #68, Day 0

description: gene expression data at Day 0


title: Patient #67, Day 8

description: gene expression data at Day 8


title: Patient #71, Day 8

description: gene expression data at Day 8


title: Patient #72, Day 0

description: gene expression data at Day 0


title: Patient #67, Day 0

description: gene expression data at Day 0


title: Patient #66, Day 8

description: gene expression data at Day 8


title: Patient #71, Day 0

description: gene expression data at Day 0


title: Patient #70, Day 0

description: gene expression data at Day 0


title: Patient #62, Day 0

description: gene expression data at Day 0


title: Patient #60, Day 8

description: gene expression data at Day 8


title: Patient #60, Day 0

description: gene expression data at Day 0


title: Patient #59, Day 8

description: gene expression data at Day 8


title: Patient #66, Day 0

description: gene expression data at Day 0


title: Patient #62, Day 8

description: gene expression data at Day 8


title: Patient #54, Day 8

description: gene expression data at Day 8


title: Patient #61, Day 8

description: gene expression data at Day 8


title: Patient #54, Day 0

description: gene expression data at Day 0


title: Patient #58, Day 0

description: gene expression data at Day 0


title: Patient #58, Day 8

description: gene expression data at Day 8


title: Patient #72, Day 8

description: gene expression data at Day 8


title: Patient #55, Day 8

description: gene expression data at Day 8


title: Patient #55, Day 0

description: gene expression data at Day 0


title: Patient #61, Day 0

description: gene expression data at Day 0


title: Patient #59, Day 0

description: gene expression data at Day 0


title: Patient #56, Day 0

description: gene expression data at Day 0


title: Patient #53, Day 8

description: gene expression data at Day 8


title: Patient #56, Day 8

description: gene expression data at Day 8


title: Patient #47, Day 0

description: gene expression data at Day 0


title: Patient #50, Day 8

description: gene expression data at Day 8


title: Patient #48, Day 8

description: gene expression data at Day 8


title: Patient #46, Day 8

description: gene expression data at Day 8


title: Patient #50, Day 0

description: gene expression data at Day 0


title: Patient #48, Day 0

description: gene expression data at Day 0


title: Patient #49, Day 0

description: gene expression data at Day 0


title: Patient #49, Day 8

description: gene expression data at Day 8


title: Patient #43, Day 8

description: gene expression data at Day 8


title: Patient #43, Day 0

description: gene expression data at Day 0


title: Patient #46, Day 0

description: gene expression data at Day 0


title: Patient #40, Day 0

description: gene expression data at Day 0


title: Patient #42, Day 0

description: gene expression data at Day 0


title: Patient #42, Day 8

description: gene expression data at Day 8


title: Patient #40, Day 8

description: gene expression data at Day 8


title: Patient #39, Day 0

description: gene expression data at Day 0


title: Patient #53, Day 0

description: gene expression data at Day 0


title: Patient #39, Day 8

description: gene expression data at Day 8


title: Patient #41, Day 8

description: gene expression data at Day 8


title: Patient #38, Day 0

description: gene expression data at Day 0


title: Patient #36, Day 8

description: gene expression data at Day 8


title: Patient #38, Day 8

description: gene expression data at Day 8


title: Patient #34, Day 8

description: gene expression data at Day 8


title: Patient #36, Day 0

description: gene expression data at Day 0


title: Patient #47, Day 8

description: gene expression data at Day 8


title: Patient #35, Day 8

description: gene expression data at Day 8


title: Patient #34, Day 0

description: gene expression data at Day 0


title: Patient #35, Day 0

description: gene expression data at Day 0


title: Patient #27, Day 0

description: gene expression data at Day 0


title: Patient #29, Day 0

description: gene expression data at Day 0


title: Patient #29, Day 8

description: gene expression data at Day 8


title: Patient #26, Day 0

description: gene expression data at Day 0


title: Patient #24, Day 0

description: gene expression data at Day 0


title: Patient #26, Day 8

description: gene expression data at Day 8


title: Patient #25, Day 0

description: gene expression data at Day 0


title: Patient #24, Day 8

description: gene expression data at Day 8


title: Patient #27, Day 8

description: gene expression data at Day 8


title: Patient #28, Day 0

description: gene expression data at Day 0


title: Patient #25, Day 8

description: gene expression data at Day 8


title: Patient #23, Day 0

description: gene expression data at Day 0


title: Patient #22, Day 8

description: gene expression data at Day 8


title: Patient #22, Day 0

description: gene expression data at Day 0


title: Patient #17, Day 0

description: gene expression data at Day 0


title: Patient #28, Day 8

description: gene expression data at Day 8


title: Patient #17, Day 8

description: gene expression data at Day 8


title: Patient #90, Day 8

description: gene expression data at Day 8


title: Patient #23, Day 8

description: gene expression data at Day 8


title: Patient #15, Day 0

description: gene expression data at Day 0


title: Patient #16, Day 0

description: gene expression data at Day 0


title: Patient #15, Day 8

description: gene expression data at Day 8


title: Patient #14, Day 8

description: gene expression data at Day 8


title: Patient #14, Day 0

description: gene expression data at Day 0


title: Patient #16, Day 8

description: gene expression data at Day 8


title: Patient #12, Day 0

description: gene expression data at Day 0


title: Patient #13, Day 0

description: gene expression data at Day 0


title: Patient #13, Day 8

description: gene expression data at Day 8


title: Patient #4, Day 0

description: gene expression data at Day 0


title: Patient #12, Day 8

description: gene expression data at Day 8


title: Patient #1, Day 8

description: gene expression data at Day 8


title: Patient #5, Day 0

description: gene expression data at Day 0


title: Patient #4, Day 8

description: gene expression data at Day 8


title: Patient #8, Day 8

description: gene expression data at Day 8


title: Patient #5, Day 8

description: gene expression data at Day 8


title: Patient #8, Day 0

description: gene expression data at Day 0


title: Patient #7, Day 8

description: gene expression data at Day 8


title: Patient #7, Day 0

description: gene expression data at Day 0


title: Patient #41, Day 0

description: gene expression data at Day 0


title: Patient #1, Day 0

description: gene expression data at Day 0


title: dkfz_ATRT_147

status: Public on Mar 02 2016

type: genomic

city: Heidelberg

first: Pascal

middle: David

last: Johann

address: Im Neuenheimer Feld 580

department: Pediatric Neurooncology

country: Germany

institute: German Cancer Research Center

hyb_protocol: bisulfite converted DNA was amplified, fragmented and hybridized according to Illumina's standard protocol

scan_protocol: Arrays were imaged using BeadArray reader

data_processing: R library minfi

molecule: genomic DNA

source_name: Tumor resection

extract_protocol: DNA isolation using Dneasy blood and tissue isolation kit (Qiagen)

value: Primary

tag: localization within the brain

value: supratentorial


title: dkfz_ATRT_144


title: dkfz_ATRT_138

tag: age at diagnosis

value: infratentorial


title: dkfz_ATRT_140


title: dkfz_ATRT_141


title: dkfz_ATRT_142


title: dkfz_ATRT_132


title: dkfz_ATRT_146


title: dkfz_ATRT_128


title: dkfz_ATRT_135


title: dkfz_ATRT_137


title: dkfz_ATRT_143


title: dkfz_ATRT_130


title: dkfz_ATRT_131


title: dkfz_ATRT_125


title: dkfz_ATRT_150


title: dkfz_ATRT_133


title: dkfz_ATRT_127


title: dkfz_ATRT_129


title: dkfz_ATRT_145


title: dkfz_ATRT_121


title: dkfz_ATRT_134


title: dkfz_ATRT_124


title: dkfz_ATRT_139


title: dkfz_ATRT_148


title: dkfz_ATRT_123


title: dkfz_ATRT_136


title: dkfz_ATRT_149


title: dkfz_ATRT_74


title: dkfz_ATRT_119

data_processing:
R library minfi
raw data: Unmethylated and methylated signal intensities

growth_protocol: Not cultured

treatment_protocol: No treatment

value: male


title: dkfz_ATRT_126


title: dkfz_ATRT_117


title: dkfz_ATRT_122


title: dkfz_ATRT_120


title: dkfz_ATRT_103


title: dkfz_ATRT_115

value: female


title: dkfz_ATRT_111


title: dkfz_ATRT_118


title: dkfz_ATRT_105


title: dkfz_ATRT_108


title: dkfz_ATRT_102


title: dkfz_ATRT_104


title: dkfz_ATRT_97


title: dkfz_ATRT_101


title: dkfz_ATRT_116


title: dkfz_ATRT_109


title: dkfz_ATRT_100


title: dkfz_ATRT_95


title: dkfz_ATRT_112


title: dkfz_ATRT_110


title: dkfz_ATRT_98


title: dkfz_ATRT_99


title: dkfz_ATRT_107


title: dkfz_ATRT_106


title: dkfz_ATRT_114


title: dkfz_ATRT_113


title: dkfz_ATRT_94


title: dkfz_ATRT_96


title: dkfz_ATRT_92


title: dkfz_ATRT_90


title: dkfz_ATRT_93


title: dkfz_ATRT_89


title: dkfz_ATRT_87


title: dkfz_ATRT_85


title: dkfz_ATRT_83


title: dkfz_ATRT_84


title: dkfz_ATRT_91


title: dkfz_ATRT_80


title: dkfz_ATRT_82


title: dkfz_ATRT_79


title: dkfz_ATRT_77


title: dkfz_ATRT_86


title: dkfz_ATRT_67


title: dkfz_ATRT_78


title: dkfz_ATRT_66


title: dkfz_ATRT_88


title: dkfz_ATRT_72


title: dkfz_ATRT_70


title: dkfz_ATRT_76


title: dkfz_ATRT_81


title: dkfz_ATRT_75


title: dkfz_ATRT_62


title: dkfz_ATRT_73


title: dkfz_ATRT_69


title: dkfz_ATRT_68


title: dkfz_ATRT_60


title: dkfz_ATRT_71


title: dkfz_ATRT_65


title: dkfz_ATRT_57


title: dkfz_ATRT_64


title: dkfz_ATRT_63


title: dkfz_ATRT_59


title: dkfz_ATRT_53


title: dkfz_ATRT_61


title: dkfz_ATRT_56


title: dkfz_ATRT_52


title: dkfz_ATRT_58


title: dkfz_ATRT_55


title: dkfz_ATRT_51


title: dkfz_ATRT_54


title: dkfz_ATRT_42


title: dkfz_ATRT_43


title: dkfz_ATRT_49


title: dkfz_ATRT_50


title: dkfz_ATRT_40


title: dkfz_ATRT_47


title: dkfz_ATRT_45


title: dkfz_ATRT_34


title: dkfz_ATRT_44


title: dkfz_ATRT_39


title: dkfz_ATRT_37


title: dkfz_ATRT_48


title: dkfz_ATRT_35


title: dkfz_ATRT_36


title: dkfz_ATRT_38


title: dkfz_ATRT_46


title: dkfz_ATRT_41


title: dkfz_ATRT_33


title: dkfz_ATRT_31


title: dkfz_ATRT_13


title: dkfz_ATRT_32


title: dkfz_ATRT_30


title: dkfz_ATRT_23


title: dkfz_ATRT_28


title: dkfz_ATRT_20


title: dkfz_ATRT_29


title: dkfz_ATRT_26


title: dkfz_ATRT_19


title: dkfz_ATRT_21


title: dkfz_ATRT_7


title: dkfz_ATRT_24


title: dkfz_ATRT_17


title: dkfz_ATRT_14


title: dkfz_ATRT_16


title: dkfz_ATRT_15


title: dkfz_ATRT_12


title: dkfz_ATRT_8


title: dkfz_ATRT_9


title: dkfz_ATRT_4


title: dkfz_ATRT_5


title: dkfz_ATRT_11


title: dkfz_ATRT_27


title: dkfz_ATRT_25


title: dkfz_ATRT_6


title: dkfz_ATRT_10


title: VC0315_GEP

status: Public on Aug 30 2013

city: MILAN

first: Luca

last: Agnelli

address: Venezian 1

department: Department of Advanced Diagnostics

country: Italy

institute: IRCCS Istituto Nazionale dei Tumori

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VC0315

hyb_protocol: The fragmented labeled single-stranded DNA target was hybridized for 16 hours and 30 minutes at 45?C on GeneChip« Gene 1.0 ST array according to the standard Affymetrix protocol.

scan_protocol: Washing and scanning were performed using GeneChip System of Affymetrix (GeneChip Hybridization Oven 640, GeneChip Fluidics Station 450 and GeneChip Scanner 7G).

data_processing: Log2-transformed expression values were extracted from CEL files and normalized using NetAffx Transcript Cluster Annotations, Release 31 and robust multi-array average (RMA) procedure in Expression Console software (Affymetrix Inc.). The expression values of transcript cluster ID specific for loci representing naturally occurring read-through transcriptions were summarized as median value for each sample.

source_name: Human chronic lymphocytic leukemia patient VC0315

label_protocol: 5.5 micrograms of single-stranded DNA target obtained from 100 ng of purified total RNA was fragmented and then labeled using the WT Terminal Labeling Kit according to the standard Affymetrix protocol (GeneChip« Whole Transcript (WT) Sense Target Labeling Assay Manual).

extract_protocol: Trizol extraction of total RNA was performed according to the manufacturer's instructions (Gibco BRL). RNA was purified using the Rneasy Mini Kit according to the manufacturer's instruction (Qiagen).

treatment_protocol: Peripheral blood mononuclear cells from B-CLL patients were isolated by Ficoll-Hypaque (Seromed, Biochrom KG, Berlin, Germany) density-gradient centrifugation and the proportion of CD5/CD19/CD23 triple positive B cells in the suspension was determined by direct immunofluorescence performed using a FACS-sort flow cytometer (Becton Dickinson & Co, Sunnyvale, CA) with antibodies to: CD19 FITC/PE, CD23 PE and CD5 Cy-Chrome (Becton Dickinson). If B-CLL cells were less than 90%, T cells, NK cells and monocytes were removed by negative selection using CD3, CD56, CD16, and CD14 monoclonal antibody (mAb) treatment (Becton Dickinson) followed by magnetic beads (Goat Anti-Mouse IgG Dynabeads, Dynal Biotech ASA, Oslo, Norway).

tag: vh status [igvh mutational status (fais et al. j clin invest, 1998)]

value: unmut


title: VS0016_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VS0016

source_name: Human chronic lymphocytic leukemia patient VS0016

value: mut


title: VP0089_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VP0089

source_name: Human chronic lymphocytic leukemia patient VP0089


title: VG0442_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VG0442

source_name: Human chronic lymphocytic leukemia patient VG0442


title: VS0140_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VS0140

source_name: Human chronic lymphocytic leukemia patient VS0140


title: VD0026_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VD0026

source_name: Human chronic lymphocytic leukemia patient VD0026


title: VC0142_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VC0142

source_name: Human chronic lymphocytic leukemia patient VC0142


title: VD0354_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VD0354

source_name: Human chronic lymphocytic leukemia patient VD0354


title: WB0269_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient WB0269

source_name: Human chronic lymphocytic leukemia patient WB0269


title: dkfz_ATRT_18


title: VB0013_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient VB0013

source_name: Human chronic lymphocytic leukemia patient VB0013


title: UL0266_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient UL0266

source_name: Human chronic lymphocytic leukemia patient UL0266


title: SS0299_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SS0299

source_name: Human chronic lymphocytic leukemia patient SS0299


title: SG0168_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SG0168

source_name: Human chronic lymphocytic leukemia patient SG0168


title: genomic DNA from PM155 control maternal blood

status: Public on Dec 22 2015

city: Vancouver

first: Wendy

last: Robinson

state: BC

address: 950 W 28th Ave

department: Medical Genetics

country: Canada

institute: University of British Columbia

hyb_protocol: bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol

scan_protocol: Arrays were imaged using BeadArray Reader (HiScan) using standard recommended Illumina scanner setting

data_processing: GenomeStudio software v2011.1

label: Cy5 and Cy3

label_protocol: Standard Illumina Protocol

extract_protocol: genomic DNA was extracted by standard salt method and purified using Qiagen DNeasy Kit according to standard instructions

tag: status/group

value: control

tag: fetal sex/sex

tag: sample tissue

value: whole maternal blood

tag: fetal gestational age (weeks)/trimester

tag: age (years)

tag: 450k plate id

tag: 450k sentrix_id

tag: 450k sentrix_position


title: SG0114_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SG0114

source_name: Human chronic lymphocytic leukemia patient SG0114


title: SL0083_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SL0083

source_name: Human chronic lymphocytic leukemia patient SL0083


title: TG0139_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient TG0139

source_name: Human chronic lymphocytic leukemia patient TG0139


title: genomic DNA from PM139 IUGR placental decidua

value: IUGR

value: placental decidua


title: SA0219_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SA0219

source_name: Human chronic lymphocytic leukemia patient SA0219


title: SA0205_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SA0205

source_name: Human chronic lymphocytic leukemia patient SA0205


title: genomic DNA from PM158 control placental chorionic villi

value: placental chorionic villi


title: RD0296_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RD0296

source_name: Human chronic lymphocytic leukemia patient RD0296


title: SA0021_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SA0021

source_name: Human chronic lymphocytic leukemia patient SA0021


title: dkfz_ATRT_22

source_name: Tumor resection

tag: tissue


title: SA0093_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SA0093

source_name: Human chronic lymphocytic leukemia patient SA0093


title: RS0325_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RS0325

source_name: Human chronic lymphocytic leukemia patient RS0325


title: dkfz_ATRT_3


title: dkfz_ATRT_2


title: TM0259_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient TM0259

source_name: Human chronic lymphocytic leukemia patient TM0259


title: RG0077_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RG0077

source_name: Human chronic lymphocytic leukemia patient RG0077


title: RR0157_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RR0157

source_name: Human chronic lymphocytic leukemia patient RR0157


title: genomic DNA from PM263 control placental chorionic villi


title: genomic DNA from PM72 IUGR placental chorionic villi


title: genomic DNA from PM205 control maternal blood


title: RB0040_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RB0040

source_name: Human chronic lymphocytic leukemia patient RB0040


title: dkfz_ATRT_1


title: RA0211_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RA0211

source_name: Human chronic lymphocytic leukemia patient RA0211


title: RA0023_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RA0023

source_name: Human chronic lymphocytic leukemia patient RA0023


title: RA0288_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RA0288

source_name: Human chronic lymphocytic leukemia patient RA0288


title: PV0322_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PV0322

source_name: Human chronic lymphocytic leukemia patient PV0322


title: PM0117_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PM0117

source_name: Human chronic lymphocytic leukemia patient PM0117


title: PV0286_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PV0286

source_name: Human chronic lymphocytic leukemia patient PV0286


title: PP0195_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PP0195

source_name: Human chronic lymphocytic leukemia patient PP0195


title: PS0212_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PS0212

source_name: Human chronic lymphocytic leukemia patient PS0212


title: SF0098_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient SF0098

source_name: Human chronic lymphocytic leukemia patient SF0098


title: PM0340_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PM0340

source_name: Human chronic lymphocytic leukemia patient PM0340


title: PF0177_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PF0177

source_name: Human chronic lymphocytic leukemia patient PF0177


title: PG0216_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PG0216

source_name: Human chronic lymphocytic leukemia patient PG0216

value: nd


title: RG0443_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RG0443

source_name: Human chronic lymphocytic leukemia patient RG0443


title: PC0304_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PC0304

source_name: Human chronic lymphocytic leukemia patient PC0304


title: PG0028_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PG0028

source_name: Human chronic lymphocytic leukemia patient PG0028


title: PA0351_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PA0351

source_name: Human chronic lymphocytic leukemia patient PA0351


title: PD0164_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PD0164

source_name: Human chronic lymphocytic leukemia patient PD0164


title: PA0271_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PA0271

source_name: Human chronic lymphocytic leukemia patient PA0271


title: PA0234_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PA0234

source_name: Human chronic lymphocytic leukemia patient PA0234


title: OM0201_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient OM0201

source_name: Human chronic lymphocytic leukemia patient OM0201


title: OV0127_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient OV0127

source_name: Human chronic lymphocytic leukemia patient OV0127


title: PA0146_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PA0146

source_name: Human chronic lymphocytic leukemia patient PA0146


title: OI0282_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient OI0282

source_name: Human chronic lymphocytic leukemia patient OI0282


title: NM0156_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient NM0156

source_name: Human chronic lymphocytic leukemia patient NM0156


title: PA0145_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient PA0145

source_name: Human chronic lymphocytic leukemia patient PA0145


title: NS0060_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient NS0060

source_name: Human chronic lymphocytic leukemia patient NS0060


title: MV0334_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MV0334

source_name: Human chronic lymphocytic leukemia patient MV0334


title: NG0068_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient NG0068

source_name: Human chronic lymphocytic leukemia patient NG0068


title: NB0333_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient NB0333

source_name: Human chronic lymphocytic leukemia patient NB0333


title: RS0260_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RS0260

source_name: Human chronic lymphocytic leukemia patient RS0260


title: MS0115_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MS0115

source_name: Human chronic lymphocytic leukemia patient MS0115


title: TL0397_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient TL0397

source_name: Human chronic lymphocytic leukemia patient TL0397


title: MO0323_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MO0323

source_name: Human chronic lymphocytic leukemia patient MO0323


title: MS0321_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MS0321

source_name: Human chronic lymphocytic leukemia patient MS0321


title: MO0174_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MO0174

source_name: Human chronic lymphocytic leukemia patient MO0174


title: MS0357_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MS0357

source_name: Human chronic lymphocytic leukemia patient MS0357


title: MS0189_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MS0189

source_name: Human chronic lymphocytic leukemia patient MS0189


title: MG0449_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MG0449

source_name: Human chronic lymphocytic leukemia patient MG0449


title: MN0167_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MN0167

source_name: Human chronic lymphocytic leukemia patient MN0167


title: MM0097_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MM0097

source_name: Human chronic lymphocytic leukemia patient MM0097


title: MC0105_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MC0105

source_name: Human chronic lymphocytic leukemia patient MC0105


title: MF0274_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MF0274

source_name: Human chronic lymphocytic leukemia patient MF0274


title: MG0248_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MG0248

source_name: Human chronic lymphocytic leukemia patient MG0248


title: MA0088_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MA0088

source_name: Human chronic lymphocytic leukemia patient MA0088


title: MG0110_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MG0110

source_name: Human chronic lymphocytic leukemia patient MG0110


title: LR0247_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient LR0247

source_name: Human chronic lymphocytic leukemia patient LR0247


title: IL0066_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient IL0066

source_name: Human chronic lymphocytic leukemia patient IL0066


title: IA0025_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient IA0025

source_name: Human chronic lymphocytic leukemia patient IA0025


title: MF0048_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MF0048

source_name: Human chronic lymphocytic leukemia patient MF0048


title: LV0118_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient LV0118

source_name: Human chronic lymphocytic leukemia patient LV0118


title: LI0133_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient LI0133

source_name: Human chronic lymphocytic leukemia patient LI0133


title: RM0400_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient RM0400

source_name: Human chronic lymphocytic leukemia patient RM0400


title: LF0102_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient LF0102

source_name: Human chronic lymphocytic leukemia patient LF0102


title: MC0055_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MC0055

source_name: Human chronic lymphocytic leukemia patient MC0055


title: MM0330_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MM0330

source_name: Human chronic lymphocytic leukemia patient MM0330


title: MF0379_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MF0379

source_name: Human chronic lymphocytic leukemia patient MF0379


title: HG0135_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient HG0135

source_name: Human chronic lymphocytic leukemia patient HG0135


title: GR0169_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GR0169

source_name: Human chronic lymphocytic leukemia patient GR0169


title: GS0343_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GS0343

source_name: Human chronic lymphocytic leukemia patient GS0343


title: MA0151_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient MA0151

source_name: Human chronic lymphocytic leukemia patient MA0151


title: GR0092_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GR0092

source_name: Human chronic lymphocytic leukemia patient GR0092


title: GP0171_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GP0171

source_name: Human chronic lymphocytic leukemia patient GP0171


title: GP0348_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GP0348

source_name: Human chronic lymphocytic leukemia patient GP0348


title: GF0281_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GF0281

source_name: Human chronic lymphocytic leukemia patient GF0281


title: GP0278_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GP0278

source_name: Human chronic lymphocytic leukemia patient GP0278


title: GL0368_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GL0368

source_name: Human chronic lymphocytic leukemia patient GL0368


title: GE0125_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GE0125

source_name: Human chronic lymphocytic leukemia patient GE0125


title: GG0027_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GG0027

source_name: Human chronic lymphocytic leukemia patient GG0027


title: GD0262_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GD0262

source_name: Human chronic lymphocytic leukemia patient GD0262


title: GN0095_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GN0095

source_name: Human chronic lymphocytic leukemia patient GN0095


title: GC0015_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GC0015

source_name: Human chronic lymphocytic leukemia patient GC0015


title: GD0158_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GD0158

source_name: Human chronic lymphocytic leukemia patient GD0158


title: GC0147_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GC0147

source_name: Human chronic lymphocytic leukemia patient GC0147


title: GA0141_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GA0141

source_name: Human chronic lymphocytic leukemia patient GA0141


title: FS0155_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FS0155

source_name: Human chronic lymphocytic leukemia patient FS0155


title: FR0283_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FR0283

source_name: Human chronic lymphocytic leukemia patient FR0283


title: GB0293_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GB0293

source_name: Human chronic lymphocytic leukemia patient GB0293


title: FP0153_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FP0153

source_name: Human chronic lymphocytic leukemia patient FP0153


title: GD0051_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GD0051

source_name: Human chronic lymphocytic leukemia patient GD0051


title: FC0075_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FC0075

source_name: Human chronic lymphocytic leukemia patient FC0075


title: GC0328_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GC0328

source_name: Human chronic lymphocytic leukemia patient GC0328


title: FM0309_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FM0309

source_name: Human chronic lymphocytic leukemia patient FM0309


title: FA0429_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FA0429

source_name: Human chronic lymphocytic leukemia patient FA0429


title: DR0312_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient DR0312

source_name: Human chronic lymphocytic leukemia patient DR0312


title: FD0404_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FD0404

source_name: Human chronic lymphocytic leukemia patient FD0404


title: FB0332_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FB0332

source_name: Human chronic lymphocytic leukemia patient FB0332


title: GA0398_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient GA0398

source_name: Human chronic lymphocytic leukemia patient GA0398


title: FA0294_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FA0294

source_name: Human chronic lymphocytic leukemia patient FA0294


title: FI0152_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient FI0152

source_name: Human chronic lymphocytic leukemia patient FI0152


title: CS0290_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CS0290

source_name: Human chronic lymphocytic leukemia patient CS0290


title: DD0280_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient DD0280

source_name: Human chronic lymphocytic leukemia patient DD0280


title: CR0297_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CR0297

source_name: Human chronic lymphocytic leukemia patient CR0297


title: CM0289_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CM0289

source_name: Human chronic lymphocytic leukemia patient CM0289


title: CP0104_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CP0104

source_name: Human chronic lymphocytic leukemia patient CP0104


title: CS0030_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CS0030

source_name: Human chronic lymphocytic leukemia patient CS0030


title: CM0246_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CM0246

source_name: Human chronic lymphocytic leukemia patient CM0246


title: DF0319_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient DF0319

source_name: Human chronic lymphocytic leukemia patient DF0319


title: CD0310_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CD0310

source_name: Human chronic lymphocytic leukemia patient CD0310


title: DN0063_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient DN0063

source_name: Human chronic lymphocytic leukemia patient DN0063


title: CG0166_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CG0166

source_name: Human chronic lymphocytic leukemia patient CG0166


title: CM0057_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CM0057

source_name: Human chronic lymphocytic leukemia patient CM0057


title: CR0203_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CR0203

source_name: Human chronic lymphocytic leukemia patient CR0203


title: CE0078_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CE0078

source_name: Human chronic lymphocytic leukemia patient CE0078


title: CE0399_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CE0399

source_name: Human chronic lymphocytic leukemia patient CE0399


title: CL0317_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CL0317

source_name: Human chronic lymphocytic leukemia patient CL0317


title: BS0214_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BS0214

source_name: Human chronic lymphocytic leukemia patient BS0214


title: CA0345_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CA0345

source_name: Human chronic lymphocytic leukemia patient CA0345


title: CC0311_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CC0311

source_name: Human chronic lymphocytic leukemia patient CC0311


title: CG0204_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CG0204

source_name: Human chronic lymphocytic leukemia patient CG0204


title: BP0326_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BP0326

source_name: Human chronic lymphocytic leukemia patient BP0326


title: CC0244_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CC0244

source_name: Human chronic lymphocytic leukemia patient CC0244


title: BV0176_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BV0176

source_name: Human chronic lymphocytic leukemia patient BV0176


title: CA0101_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CA0101

source_name: Human chronic lymphocytic leukemia patient CA0101


title: BR0218_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BR0218

source_name: Human chronic lymphocytic leukemia patient BR0218


title: CA0058_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CA0058

source_name: Human chronic lymphocytic leukemia patient CA0058


title: DT0300_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient DT0300

source_name: Human chronic lymphocytic leukemia patient DT0300


title: BV0229_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BV0229

source_name: Human chronic lymphocytic leukemia patient BV0229


title: BE0192_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BE0192

source_name: Human chronic lymphocytic leukemia patient BE0192


title: AR0242_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AR0242

source_name: Human chronic lymphocytic leukemia patient AR0242


title: BB0245_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BB0245

source_name: Human chronic lymphocytic leukemia patient BB0245


title: AM0270_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AM0270

source_name: Human chronic lymphocytic leukemia patient AM0270


title: AG0403_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AG0403

source_name: Human chronic lymphocytic leukemia patient AG0403


title: AM0220_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AM0220

source_name: Human chronic lymphocytic leukemia patient AM0220


title: AG0268_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AG0268

source_name: Human chronic lymphocytic leukemia patient AG0268


title: AM0067_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AM0067

source_name: Human chronic lymphocytic leukemia patient AM0067


title: BL0162_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BL0162

source_name: Human chronic lymphocytic leukemia patient BL0162


title: BF0316_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient BF0316

source_name: Human chronic lymphocytic leukemia patient BF0316


title: CA0160_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient CA0160

source_name: Human chronic lymphocytic leukemia patient CA0160


title: AS0012_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AS0012

source_name: Human chronic lymphocytic leukemia patient AS0012


title: AG0318_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AG0318

source_name: Human chronic lymphocytic leukemia patient AG0318


title: AM0034_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AM0034

source_name: Human chronic lymphocytic leukemia patient AM0034


title: AA0284_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AA0284

source_name: Human chronic lymphocytic leukemia patient AA0284


title: AB0350_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AB0350

source_name: Human chronic lymphocytic leukemia patient AB0350


title: AG0136_GEP

description: Gene expression profiling data from human chronic lymphocytic leukemia patient AG0136

source_name: Human chronic lymphocytic leukemia patient AG0136


title: Renal cell carcinoma: rccc-28, normal 2 (part 2 of 2)

status: Public on Jul 19 2001

first: Wolfgang

last: Huber

address: Im Neuenheimer Feld 280

department: Molecular Genome Analysis

description:
sex=m
age=44
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3626232 reuse=3 date=28-Apr-2000

source_name: normal kidney tissue (as reference)