title: GBM, G34, sample 782 [validation set]

description:
SAMPLE 782
Methylation data from brain tumor sample.

value: GBM, G34


title: SCHW, MEL, sample 805 [validation set]

status: Public on Jan 18 2018

type: genomic

city: Heidelberg

first: Martin

last: Sill

address: Im Neuenheimer Feld 280

department: Division of Pediatric Neurooncology

country: Germany

institute: DKFZ

description:
SAMPLE 805
Methylation data from brain tumor sample.

hyb_protocol: Illumina protocol.

scan_protocol: Illumina iScan System according to the manufacturer's protocol.

data_processing: Bioconductor (Version 3.3) package minifi (Version 1.18) using function 'preprocessIllumina'.

label: biotin/DNP

molecule: genomic DNA

organism: Homo sapiens

source_name: brain tumor

label_protocol: Illumina protocol.

extract_protocol: Illumina protocol.

treatment_protocol: Extraction of high molecular weight DNA from frozen tumor samples was carried out by use of a salting-out method or by ultracentrifugation over cesium chloride.

tag: tissue

value: brain tumor

tag: methylation class

value: SCHW, MEL

tag: material


title: MB, G4, sample 790 [validation set]

description:
SAMPLE 790
Methylation data from brain tumor sample.

value: MB, G4


title: MB, WNT, sample 778 [validation set]

description:
SAMPLE 778
Methylation data from brain tumor sample.

value: MB, WNT


title: LGG, PA MID, sample 781 [validation set]

description:
SAMPLE 781
Methylation data from brain tumor sample.

value: LGG, PA MID


title: MB, SHH CHL AD, sample 785 [validation set]

description:
SAMPLE 785
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: LGG, GG, sample 773 [validation set]

description:
SAMPLE 773
Methylation data from brain tumor sample.

value: LGG, GG


title: PXA, sample 768 [validation set]

description:
SAMPLE 768
Methylation data from brain tumor sample.

value: PXA


title: GBM, MYCN, sample 772 [validation set]

description:
SAMPLE 772
Methylation data from brain tumor sample.

value: GBM, MYCN


title: O IDH, sample 777 [validation set]

description:
SAMPLE 777
Methylation data from brain tumor sample.

value: O IDH


title: SCHW, sample 775 [validation set]

description:
SAMPLE 775
Methylation data from brain tumor sample.

value: SCHW


title: GBM, RTK II, sample 776 [validation set]

description:
SAMPLE 776
Methylation data from brain tumor sample.

value: GBM, RTK II


title: MB, SHH CHL AD, sample 771 [validation set]

description:
SAMPLE 771
Methylation data from brain tumor sample.


title: A IDH, sample 770 [validation set]

description:
SAMPLE 770
Methylation data from brain tumor sample.

value: A IDH


title: GBM, MES, sample 769 [validation set]

description:
SAMPLE 769
Methylation data from brain tumor sample.

value: GBM, MES


title: LGG, PA PF, sample 792 [validation set]

description:
SAMPLE 792
Methylation data from brain tumor sample.

value: LGG, PA PF


title: GBM, MES, sample 764 [validation set]

description:
SAMPLE 764
Methylation data from brain tumor sample.


title: GBM, MID, sample 767 [validation set]

description:
SAMPLE 767
Methylation data from brain tumor sample.

value: GBM, MID


title: O IDH, sample 784 [validation set]

description:
SAMPLE 784
Methylation data from brain tumor sample.


title: A IDH, sample 766 [validation set]

description:
SAMPLE 766
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 765 [validation set]

description:
SAMPLE 765
Methylation data from brain tumor sample.


title: PXA, sample 762 [validation set]

description:
SAMPLE 762
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 761 [validation set]

description:
SAMPLE 761
Methylation data from brain tumor sample.


title: GBM, G34, sample 760 [validation set]

description:
SAMPLE 760
Methylation data from brain tumor sample.

value: GBM, G34


title: GBM, RTK II, sample 757 [validation set]

description:
SAMPLE 757
Methylation data from brain tumor sample.

value: brain tumor


title: ANA PA, sample 758 [validation set]

description:
SAMPLE 758
Methylation data from brain tumor sample.

value: ANA PA


title: GBM, RTK II, sample 756 [validation set]

description:
SAMPLE 756
Methylation data from brain tumor sample.


title: EPN, PF A, sample 759 [validation set]

description:
SAMPLE 759
Methylation data from brain tumor sample.

value: EPN, PF A


title: MNG, sample 755 [validation set]

description:
SAMPLE 755
Methylation data from brain tumor sample.

value: MNG


title: GBM, RTK I, sample 751 [validation set]

description:
SAMPLE 751
Methylation data from brain tumor sample.

value: GBM, RTK I


title: MB, G3, sample 774 [validation set]

description:
SAMPLE 774
Methylation data from brain tumor sample.

value: MB, G3


title: LGG, PA PF, sample 753 [validation set]

description:
SAMPLE 753
Methylation data from brain tumor sample.


title: LGG, SEGA, sample 752 [validation set]

description:
SAMPLE 752
Methylation data from brain tumor sample.

value: LGG, SEGA


title: GBM, MYCN, sample 754 [validation set]

description:
SAMPLE 754
Methylation data from brain tumor sample.


title: A IDH, sample 750 [validation set]

description:
SAMPLE 750
Methylation data from brain tumor sample.


title: GBM, G34, sample 749 [validation set]

description:
SAMPLE 749
Methylation data from brain tumor sample.


title: A IDH, sample 746 [validation set]

description:
SAMPLE 746
Methylation data from brain tumor sample.


title: A IDH, sample 747 [validation set]

description:
SAMPLE 747
Methylation data from brain tumor sample.


title: GBM, G34, sample 745 [validation set]

description:
SAMPLE 745
Methylation data from brain tumor sample.


title: MB, SHH INF, sample 742 [validation set]

description:
SAMPLE 742
Methylation data from brain tumor sample.

value: MB, SHH INF


title: GBM, MES, sample 744 [validation set]

description:
SAMPLE 744
Methylation data from brain tumor sample.


title: PXA, sample 743 [validation set]

description:
SAMPLE 743
Methylation data from brain tumor sample.

value: PXA


title: LGG, DNT, sample 741 [validation set]

description:
SAMPLE 741
Methylation data from brain tumor sample.

value: LGG, DNT


title: GBM, MID, sample 739 [validation set]

description:
SAMPLE 739
Methylation data from brain tumor sample.


title: GBM, MID, sample 763 [validation set]

description:
SAMPLE 763
Methylation data from brain tumor sample.


title: A IDH, sample 740 [validation set]

description:
SAMPLE 740
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 736 [validation set]

description:
SAMPLE 736
Methylation data from brain tumor sample.


title: GBM, RTK III, sample 738 [validation set]

description:
SAMPLE 738
Methylation data from brain tumor sample.

value: GBM, RTK III


title: O IDH, sample 737 [validation set]

description:
SAMPLE 737
Methylation data from brain tumor sample.

value: O IDH


title: GBM, MES, sample 735 [validation set]

description:
SAMPLE 735
Methylation data from brain tumor sample.


title: MNG, sample 734 [validation set]

description:
SAMPLE 734
Methylation data from brain tumor sample.


title: GBM, MYCN, sample 733 [validation set]

description:
SAMPLE 733
Methylation data from brain tumor sample.

value: GBM, MYCN


title: MNG, sample 732 [validation set]

description:
SAMPLE 732
Methylation data from brain tumor sample.


title: EPN, PF A, sample 731 [validation set]

description:
SAMPLE 731
Methylation data from brain tumor sample.


title: PLEX, PED B, sample 729 [validation set]

description:
SAMPLE 729
Methylation data from brain tumor sample.

value: PLEX, PED B


title: A IDH, HG, sample 748 [validation set]

description:
SAMPLE 748
Methylation data from brain tumor sample.

value: A IDH, HG


title: DMG, K27, sample 730 [validation set]

description:
SAMPLE 730
Methylation data from brain tumor sample.

value: DMG, K27


title: GBM, MES, sample 726 [validation set]

description:
SAMPLE 726
Methylation data from brain tumor sample.

value: GBM, MES


title: A IDH, sample 728 [validation set]

description:
SAMPLE 728
Methylation data from brain tumor sample.

value: brain tumor

value: A IDH


title: EPN, SPINE, sample 725 [validation set]

description:
SAMPLE 725
Methylation data from brain tumor sample.

value: EPN, SPINE


title: ETMR, sample 722 [validation set]

description:
SAMPLE 722
Methylation data from brain tumor sample.

value: ETMR


title: ATRT, MYC, sample 724 [validation set]

description:
SAMPLE 724
Methylation data from brain tumor sample.

value: ATRT, MYC


title: GBM, RTK II, sample 723 [validation set]

description:
SAMPLE 723
Methylation data from brain tumor sample.

value: GBM, RTK II


title: LGG, DNT, sample 720 [validation set]

description:
SAMPLE 720
Methylation data from brain tumor sample.


title: MNG, sample 721 [validation set]

description:
SAMPLE 721
Methylation data from brain tumor sample.

value: MNG


title: DMG, K27, sample 719 [validation set]

description:
SAMPLE 719
Methylation data from brain tumor sample.


title: A IDH, sample 717 [validation set]

description:
SAMPLE 717
Methylation data from brain tumor sample.


title: LGG, PA/GG ST, sample 718 [validation set]

description:
SAMPLE 718
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: GBM, MES, sample 715 [validation set]

description:
SAMPLE 715
Methylation data from brain tumor sample.


title: A IDH, sample 716 [validation set]

description:
SAMPLE 716
Methylation data from brain tumor sample.


title: A IDH, sample 713 [validation set]

description:
SAMPLE 713
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 709 [validation set]

description:
SAMPLE 709
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: LGG, PA PF, sample 710 [validation set]

description:
SAMPLE 710
Methylation data from brain tumor sample.

value: LGG, PA PF


title: MB, WNT, sample 707 [validation set]

description:
SAMPLE 707
Methylation data from brain tumor sample.

value: MB, WNT


title: GBM, G34, sample 706 [validation set]

description:
SAMPLE 706
Methylation data from brain tumor sample.

value: GBM, G34


title: O IDH, sample 727 [validation set]

description:
SAMPLE 727
Methylation data from brain tumor sample.

value: O IDH


title: MNG, sample 701 [validation set]

description:
SAMPLE 701
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 703 [validation set]

description:
SAMPLE 703
Methylation data from brain tumor sample.

value: GBM, RTK I


title: MB, SHH INF, sample 705 [validation set]

description:
SAMPLE 705
Methylation data from brain tumor sample.

value: MB, SHH INF


title: LGG, PA PF, sample 702 [validation set]

description:
SAMPLE 702
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 704 [validation set]

description:
SAMPLE 704
Methylation data from brain tumor sample.


title: GBM, MYCN, sample 700 [validation set]

description:
SAMPLE 700
Methylation data from brain tumor sample.

value: GBM, MYCN


title: A IDH, sample 697 [validation set]

description:
SAMPLE 697
Methylation data from brain tumor sample.


title: SFT HMPC, sample 699 [validation set]

description:
SAMPLE 699
Methylation data from brain tumor sample.

value: SFT HMPC


title: DMG, K27, sample 696 [validation set]

description:
SAMPLE 696
Methylation data from brain tumor sample.

value: brain tumor

value: DMG, K27


title: GBM, MES, sample 698 [validation set]

description:
SAMPLE 698
Methylation data from brain tumor sample.

value: GBM, MES


title: MB, WNT, sample 692 [validation set]

description:
SAMPLE 692
Methylation data from brain tumor sample.


title: GBM, MES, sample 694 [validation set]

description:
SAMPLE 694
Methylation data from brain tumor sample.


title: MB, G3, sample 695 [validation set]

description:
SAMPLE 695
Methylation data from brain tumor sample.

value: MB, G3


title: LGG, PA/GG ST, sample 689 [validation set]

description:
SAMPLE 689
Methylation data from brain tumor sample.


title: MB, G3, sample 688 [validation set]

description:
SAMPLE 688
Methylation data from brain tumor sample.


title: GBM, MES, sample 712 [validation set]

description:
SAMPLE 712
Methylation data from brain tumor sample.


title: GBM, G34, sample 687 [validation set]

description:
SAMPLE 687
Methylation data from brain tumor sample.


title: LGG, DNT, sample 691 [validation set]

description:
SAMPLE 691
Methylation data from brain tumor sample.

value: LGG, DNT


title: MB, G4, sample 686 [validation set]

description:
SAMPLE 686
Methylation data from brain tumor sample.

value: MB, G4


title: GBM, RTK III, sample 690 [validation set]

description:
SAMPLE 690
Methylation data from brain tumor sample.

value: GBM, RTK III


title: GBM, RTK I, sample 683 [validation set]

description:
SAMPLE 683
Methylation data from brain tumor sample.


title: MB, G4, sample 685 [validation set]

description:
SAMPLE 685
Methylation data from brain tumor sample.


title: DMG, K27, sample 693 [validation set]

description:
SAMPLE 693
Methylation data from brain tumor sample.


title: MB, G4, sample 711 [validation set]

description:
SAMPLE 711
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 682 [validation set]

description:
SAMPLE 682
Methylation data from brain tumor sample.

value: GBM, RTK II


title: MB, G4, sample 708 [validation set]

description:
SAMPLE 708
Methylation data from brain tumor sample.


title: MB, G4, sample 671 [validation set]

description:
SAMPLE 671
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 678 [validation set]

description:
SAMPLE 678
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 680 [validation set]

description:
SAMPLE 680
Methylation data from brain tumor sample.


title: GBM, MES, sample 677 [validation set]

description:
SAMPLE 677
Methylation data from brain tumor sample.


title: A IDH, sample 681 [validation set]

description:
SAMPLE 681
Methylation data from brain tumor sample.

value: A IDH


title: GBM, RTK III, sample 674 [validation set]

description:
SAMPLE 674
Methylation data from brain tumor sample.


title: MB, G4, sample 670 [validation set]

description:
SAMPLE 670
Methylation data from brain tumor sample.


title: MB, WNT, sample 668 [validation set]

description:
SAMPLE 668
Methylation data from brain tumor sample.


title: ATRT, TYR, sample 676 [validation set]

description:
SAMPLE 676
Methylation data from brain tumor sample.

value: ATRT, TYR


title: LGG, PA PF, sample 673 [validation set]

description:
SAMPLE 673
Methylation data from brain tumor sample.

value: LGG, PA PF


title: PXA, sample 669 [validation set]

description:
SAMPLE 669
Methylation data from brain tumor sample.

value: PXA


title: EPN, PF A, sample 675 [validation set]

description:
SAMPLE 675
Methylation data from brain tumor sample.

value: EPN, PF A


title: EPN, RELA, sample 664 [validation set]

description:
SAMPLE 664
Methylation data from brain tumor sample.

value: EPN, RELA


title: LGG, GG, sample 666 [validation set]

description:
SAMPLE 666
Methylation data from brain tumor sample.

value: LGG, GG


title: MB, G3, sample 658 [validation set]

description:
SAMPLE 658
Methylation data from brain tumor sample.


title: O IDH, sample 663 [validation set]

description:
SAMPLE 663
Methylation data from brain tumor sample.

value: O IDH


title: GBM, MES, sample 661 [validation set]

description:
SAMPLE 661
Methylation data from brain tumor sample.


title: A IDH, sample 660 [validation set]

description:
SAMPLE 660
Methylation data from brain tumor sample.


title: DMG, K27, sample 667 [validation set]

description:
SAMPLE 667
Methylation data from brain tumor sample.


title: O IDH, sample 665 [validation set]

description:
SAMPLE 665
Methylation data from brain tumor sample.


title: A IDH, sample 657 [validation set]

description:
SAMPLE 657
Methylation data from brain tumor sample.


title: DLGNT, sample 659 [validation set]

description:
SAMPLE 659
Methylation data from brain tumor sample.

value: DLGNT


title: LGG, PA/GG ST, sample 653 [validation set]

description:
SAMPLE 653
Methylation data from brain tumor sample.

value: brain tumor

value: LGG, PA/GG ST


title: LGG, MYB, sample 652 [validation set]

description:
SAMPLE 652
Methylation data from brain tumor sample.

value: LGG, MYB


title: MB, G4, sample 651 [validation set]

description:
SAMPLE 651
Methylation data from brain tumor sample.


title: A IDH, sample 650 [validation set]

description:
SAMPLE 650
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 649 [validation set]

description:
SAMPLE 649
Methylation data from brain tumor sample.


title: GBM, MES, sample 648 [validation set]

description:
SAMPLE 648
Methylation data from brain tumor sample.

value: GBM, MES


title: CNS NB, FOXR2, sample 646 [validation set]

description:
SAMPLE 646
Methylation data from brain tumor sample.

value: CNS NB, FOXR2


title: GBM, MES, sample 662 [validation set]

description:
SAMPLE 662
Methylation data from brain tumor sample.


title: MB, G4, sample 643 [validation set]

description:
SAMPLE 643
Methylation data from brain tumor sample.

value: MB, G4


title: GBM, MYCN, sample 644 [validation set]

description:
SAMPLE 644
Methylation data from brain tumor sample.

value: GBM, MYCN


title: GBM, RTK II, sample 647 [validation set]

description:
SAMPLE 647
Methylation data from brain tumor sample.

value: GBM, RTK II


title: HGNET, MN1, sample 645 [validation set]

description:
SAMPLE 645
Methylation data from brain tumor sample.

value: HGNET, MN1


title: HGNET, MN1, sample 640 [validation set]

description:
SAMPLE 640
Methylation data from brain tumor sample.


title: LGG, DNT, sample 637 [validation set]

description:
SAMPLE 637
Methylation data from brain tumor sample.

value: LGG, DNT


title: GBM, RTK II, sample 639 [validation set]

description:
SAMPLE 639
Methylation data from brain tumor sample.


title: MNG, sample 638 [validation set]

description:
SAMPLE 638
Methylation data from brain tumor sample.

value: MNG


title: MB, SHH CHL AD, sample 635 [validation set]

description:
SAMPLE 635
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: PIN T, PB B, sample 656 [validation set]

description:
SAMPLE 656
Methylation data from brain tumor sample.

value: PIN T, PB B


title: EPN, RELA, sample 631 [validation set]

description:
SAMPLE 631
Methylation data from brain tumor sample.

value: EPN, RELA


title: MB, G4, sample 632 [validation set]

description:
SAMPLE 632
Methylation data from brain tumor sample.


title: LGG, PA MID, sample 634 [validation set]

description:
SAMPLE 634
Methylation data from brain tumor sample.

value: LGG, PA MID


title: DMG, K27, sample 633 [validation set]

description:
SAMPLE 633
Methylation data from brain tumor sample.

value: DMG, K27


title: MB, SHH CHL AD, sample 627 [validation set]

description:
SAMPLE 627
Methylation data from brain tumor sample.


title: LGG, RGNT, sample 629 [validation set]

description:
SAMPLE 629
Methylation data from brain tumor sample.

value: LGG, RGNT


title: EPN, PF A, sample 630 [validation set]

description:
SAMPLE 630
Methylation data from brain tumor sample.

value: brain tumor

value: EPN, PF A


title: EPN, PF A, sample 628 [validation set]

description:
SAMPLE 628
Methylation data from brain tumor sample.


title: A IDH, sample 625 [validation set]

description:
SAMPLE 625
Methylation data from brain tumor sample.

value: A IDH


title: A IDH, sample 626 [validation set]

description:
SAMPLE 626
Methylation data from brain tumor sample.


title: DMG, K27, sample 642 [validation set]

description:
SAMPLE 642
Methylation data from brain tumor sample.


title: A IDH, HG, sample 636 [validation set]

description:
SAMPLE 636
Methylation data from brain tumor sample.

value: A IDH, HG


title: GBM, RTK I, sample 641 [validation set]

description:
SAMPLE 641
Methylation data from brain tumor sample.

value: GBM, RTK I


title: GBM, RTK II, sample 621 [validation set]

description:
SAMPLE 621
Methylation data from brain tumor sample.


title: MB, G3, sample 622 [validation set]

description:
SAMPLE 622
Methylation data from brain tumor sample.

value: MB, G3


title: MB, SHH CHL AD, sample 623 [validation set]

description:
SAMPLE 623
Methylation data from brain tumor sample.


title: GBM, MES, sample 620 [validation set]

description:
SAMPLE 620
Methylation data from brain tumor sample.

value: GBM, MES


title: A IDH, sample 619 [validation set]

description:
SAMPLE 619
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 617 [validation set]

description:
SAMPLE 617
Methylation data from brain tumor sample.

value: LGG, PA PF


title: LGG, PA PF, sample 618 [validation set]

description:
SAMPLE 618
Methylation data from brain tumor sample.


title: EPN, PF A, sample 616 [validation set]

description:
SAMPLE 616
Methylation data from brain tumor sample.


title: GBM, MES, sample 614 [validation set]

description:
SAMPLE 614
Methylation data from brain tumor sample.


title: CN, sample 613 [validation set]

description:
SAMPLE 613
Methylation data from brain tumor sample.

value: CN


title: MB, SHH CHL AD, sample 609 [validation set]

description:
SAMPLE 609
Methylation data from brain tumor sample.


title: MB, G3, sample 607 [validation set]

description:
SAMPLE 607
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 611 [validation set]

description:
SAMPLE 611
Methylation data from brain tumor sample.

value: GBM, RTK II


title: GBM, RTK II, sample 612 [validation set]

description:
SAMPLE 612
Methylation data from brain tumor sample.


title: EPN, PF A, sample 608 [validation set]

description:
SAMPLE 608
Methylation data from brain tumor sample.


title: HGNET, BCOR, sample 624 [validation set]

description:
SAMPLE 624
Methylation data from brain tumor sample.

value: HGNET, BCOR


title: MB, SHH INF, sample 606 [validation set]

description:
SAMPLE 606
Methylation data from brain tumor sample.

value: MB, SHH INF


title: MB, G4, sample 599 [validation set]

description:
SAMPLE 599
Methylation data from brain tumor sample.

value: MB, G4


title: GBM, RTK III, sample 597 [validation set]

description:
SAMPLE 597
Methylation data from brain tumor sample.

value: GBM, RTK III


title: ATRT, SHH, sample 600 [validation set]

description:
SAMPLE 600
Methylation data from brain tumor sample.

value: ATRT, SHH


title: ANA PA, sample 602 [validation set]

description:
SAMPLE 602
Methylation data from brain tumor sample.

value: ANA PA


title: GBM, MES, sample 601 [validation set]

description:
SAMPLE 601
Methylation data from brain tumor sample.


title: MB, G3, sample 604 [validation set]

description:
SAMPLE 604
Methylation data from brain tumor sample.


title: MB, G4, sample 605 [validation set]

description:
SAMPLE 605
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 596 [validation set]

description:
SAMPLE 596
Methylation data from brain tumor sample.


title: MB, G3, sample 595 [validation set]

description:
SAMPLE 595
Methylation data from brain tumor sample.


title: LGG, PA/GG ST, sample 615 [validation set]

description:
SAMPLE 615
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: HMB, sample 589 [validation set]

description:
SAMPLE 589
Methylation data from brain tumor sample.

value: brain tumor

value: HMB


title: A IDH, sample 594 [validation set]

description:
SAMPLE 594
Methylation data from brain tumor sample.

value: A IDH


title: LGG, DNT, sample 592 [validation set]

description:
SAMPLE 592
Methylation data from brain tumor sample.

value: LGG, DNT


title: MB, G4, sample 593 [validation set]

description:
SAMPLE 593
Methylation data from brain tumor sample.


title: MNG, sample 588 [validation set]

description:
SAMPLE 588
Methylation data from brain tumor sample.

value: MNG


title: GBM, G34, sample 586 [validation set]

description:
SAMPLE 586
Methylation data from brain tumor sample.

value: GBM, G34


title: DMG, K27, sample 587 [validation set]

description:
SAMPLE 587
Methylation data from brain tumor sample.

value: DMG, K27


title: MB, G4, sample 585 [validation set]

description:
SAMPLE 585
Methylation data from brain tumor sample.


title: MB, G4, sample 603 [validation set]

description:
SAMPLE 603
Methylation data from brain tumor sample.


title: A IDH, sample 584 [validation set]

description:
SAMPLE 584
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 598 [validation set]

description:
SAMPLE 598
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: A IDH, HG, sample 583 [validation set]

description:
SAMPLE 583
Methylation data from brain tumor sample.

value: A IDH, HG


title: MB, G3, sample 581 [validation set]

description:
SAMPLE 581
Methylation data from brain tumor sample.

value: MB, G3


title: LGG, PA/GG ST, sample 582 [validation set]

description:
SAMPLE 582
Methylation data from brain tumor sample.


title: MNG, sample 579 [validation set]

description:
SAMPLE 579
Methylation data from brain tumor sample.


title: GBM, MES, sample 578 [validation set]

description:
SAMPLE 578
Methylation data from brain tumor sample.

value: GBM, MES


title: A IDH, sample 577 [validation set]

description:
SAMPLE 577
Methylation data from brain tumor sample.


title: MNG, sample 575 [validation set]

description:
SAMPLE 575
Methylation data from brain tumor sample.


title: GBM, MES, sample 574 [validation set]

description:
SAMPLE 574
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 576 [validation set]

description:
SAMPLE 576
Methylation data from brain tumor sample.

value: GBM, RTK I


title: DMG, K27, sample 573 [validation set]

description:
SAMPLE 573
Methylation data from brain tumor sample.


title: MB, SHH INF, sample 590 [validation set]

description:
SAMPLE 590
Methylation data from brain tumor sample.

value: MB, SHH INF


title: GBM, MES, sample 572 [validation set]

description:
SAMPLE 572
Methylation data from brain tumor sample.


title: GBM, MES, sample 569 [validation set]

description:
SAMPLE 569
Methylation data from brain tumor sample.


title: O IDH, sample 570 [validation set]

description:
SAMPLE 570
Methylation data from brain tumor sample.

value: O IDH


title: GBM, RTK II, sample 568 [validation set]

description:
SAMPLE 568
Methylation data from brain tumor sample.

value: GBM, RTK II


title: O IDH, sample 571 [validation set]

description:
SAMPLE 571
Methylation data from brain tumor sample.


title: A IDH, sample 565 [validation set]

description:
SAMPLE 565
Methylation data from brain tumor sample.


title: GBM, MES, sample 564 [validation set]

description:
SAMPLE 564
Methylation data from brain tumor sample.


title: LGG, PA MID, sample 562 [validation set]

description:
SAMPLE 562
Methylation data from brain tumor sample.

value: LGG, PA MID


title: GBM, RTK I, sample 566 [validation set]

description:
SAMPLE 566
Methylation data from brain tumor sample.


title: A IDH, sample 559 [validation set]

description:
SAMPLE 559
Methylation data from brain tumor sample.


title: GBM, MES, sample 560 [validation set]

description:
SAMPLE 560
Methylation data from brain tumor sample.


title: A IDH, HG, sample 561 [validation set]

description:
SAMPLE 561
Methylation data from brain tumor sample.


title: ANA PA, sample 558 [validation set]

description:
SAMPLE 558
Methylation data from brain tumor sample.

value: ANA PA


title: GBM, RTK II, sample 563 [validation set]

description:
SAMPLE 563
Methylation data from brain tumor sample.

value: brain tumor


title: O IDH, sample 580 [validation set]

description:
SAMPLE 580
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 557 [validation set]

description:
SAMPLE 557
Methylation data from brain tumor sample.


title: EPN, RELA, sample 556 [validation set]

description:
SAMPLE 556
Methylation data from brain tumor sample.

value: EPN, RELA


title: MB, WNT, sample 555 [validation set]

description:
SAMPLE 555
Methylation data from brain tumor sample.

value: MB, WNT


title: LGG, PA/GG ST, sample 554 [validation set]

description:
SAMPLE 554
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: MB, SHH CHL AD, sample 552 [validation set]

description:
SAMPLE 552
Methylation data from brain tumor sample.


title: MNG, sample 553 [validation set]

description:
SAMPLE 553
Methylation data from brain tumor sample.

value: MNG


title: O IDH, sample 550 [validation set]

description:
SAMPLE 550
Methylation data from brain tumor sample.


title: PXA, sample 549 [validation set]

description:
SAMPLE 549
Methylation data from brain tumor sample.

value: PXA


title: MB, G4, sample 548 [validation set]

description:
SAMPLE 548
Methylation data from brain tumor sample.

value: MB, G4


title: A IDH, sample 567 [validation set]

description:
SAMPLE 567
Methylation data from brain tumor sample.

value: A IDH


title: GBM, MES, sample 544 [validation set]

description:
SAMPLE 544
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 546 [validation set]

description:
SAMPLE 546
Methylation data from brain tumor sample.


title: A IDH, sample 545 [validation set]

description:
SAMPLE 545
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 542 [validation set]

description:
SAMPLE 542
Methylation data from brain tumor sample.


title: PXA, sample 541 [validation set]

description:
SAMPLE 541
Methylation data from brain tumor sample.


title: MNG, sample 540 [validation set]

description:
SAMPLE 540
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 536 [validation set]

description:
SAMPLE 536
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 538 [validation set]

description:
SAMPLE 538
Methylation data from brain tumor sample.


title: MNG, sample 539 [validation set]

description:
SAMPLE 539
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 537 [validation set]

description:
SAMPLE 537
Methylation data from brain tumor sample.


title: GBM, MES, sample 534 [validation set]

description:
SAMPLE 534
Methylation data from brain tumor sample.


title: SCHW, sample 531 [validation set]

description:
SAMPLE 531
Methylation data from brain tumor sample.

value: SCHW


title: A IDH, sample 535 [validation set]

description:
SAMPLE 535
Methylation data from brain tumor sample.


title: IHG, sample 532 [validation set]

description:
SAMPLE 532
Methylation data from brain tumor sample.

value: IHG


title: GBM, MYCN, sample 533 [validation set]

description:
SAMPLE 533
Methylation data from brain tumor sample.

value: GBM, MYCN


title: O IDH, sample 529 [validation set]

description:
SAMPLE 529
Methylation data from brain tumor sample.


title: ATRT, SHH, sample 530 [validation set]

description:
SAMPLE 530
Methylation data from brain tumor sample.

value: ATRT, SHH


title: MB, G4, sample 528 [validation set]

description:
SAMPLE 528
Methylation data from brain tumor sample.


title: MB, G3, sample 527 [validation set]

description:
SAMPLE 527
Methylation data from brain tumor sample.

value: MB, G3


title: A IDH, HG, sample 523 [validation set]

description:
SAMPLE 523
Methylation data from brain tumor sample.

value: A IDH, HG


title: DMG, K27, sample 522 [validation set]

description:
SAMPLE 522
Methylation data from brain tumor sample.

value: DMG, K27


title: IHG, sample 525 [validation set]

description:
SAMPLE 525
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 526 [validation set]

description:
SAMPLE 526
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: GBM, RTK II, sample 543 [validation set]

description:
SAMPLE 543
Methylation data from brain tumor sample.

value: GBM, RTK II


title: LGG, PA/GG ST, sample 519 [validation set]

description:
SAMPLE 519
Methylation data from brain tumor sample.

value: brain tumor


title: GBM, MES, sample 515 [validation set]

description:
SAMPLE 515
Methylation data from brain tumor sample.

value: GBM, MES


title: GBM, MES, sample 551 [validation set]

description:
SAMPLE 551
Methylation data from brain tumor sample.


title: A IDH, sample 547 [validation set]

description:
SAMPLE 547
Methylation data from brain tumor sample.


title: MNG, sample 516 [validation set]

description:
SAMPLE 516
Methylation data from brain tumor sample.


title: O IDH, sample 514 [validation set]

description:
SAMPLE 514
Methylation data from brain tumor sample.

value: O IDH


title: A IDH, sample 521 [validation set]

description:
SAMPLE 521
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 518 [validation set]

description:
SAMPLE 518
Methylation data from brain tumor sample.

value: LGG, PA PF


title: EPN, PF B, sample 513 [validation set]

description:
SAMPLE 513
Methylation data from brain tumor sample.

value: EPN, PF B


title: GBM, MYCN, sample 509 [validation set]

description:
SAMPLE 509
Methylation data from brain tumor sample.


title: ATRT, MYC, sample 508 [validation set]

description:
SAMPLE 508
Methylation data from brain tumor sample.

value: ATRT, MYC


title: A IDH, HG, sample 500 [validation set]

description:
SAMPLE 500
Methylation data from brain tumor sample.


title: A IDH, sample 502 [validation set]

description:
SAMPLE 502
Methylation data from brain tumor sample.


title: MB, G4, sample 507 [validation set]

description:
SAMPLE 507
Methylation data from brain tumor sample.

value: MB, G4


title: DMG, K27, sample 511 [validation set]

description:
SAMPLE 511
Methylation data from brain tumor sample.


title: O IDH, sample 524 [validation set]

description:
SAMPLE 524
Methylation data from brain tumor sample.


title: MNG, sample 517 [validation set]

description:
SAMPLE 517
Methylation data from brain tumor sample.

value: MNG


title: GBM, RTK II, sample 510 [validation set]

description:
SAMPLE 510
Methylation data from brain tumor sample.


title: MELAN, sample 505 [validation set]

description:
SAMPLE 505
Methylation data from brain tumor sample.

value: MELAN


title: ATRT, SHH, sample 493 [validation set]

description:
SAMPLE 493
Methylation data from brain tumor sample.


title: O IDH, sample 495 [validation set]

description:
SAMPLE 495
Methylation data from brain tumor sample.


title: MB, G4, sample 503 [validation set]

description:
SAMPLE 503
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 492 [validation set]

description:
SAMPLE 492
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 491 [validation set]

description:
SAMPLE 491
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 501 [validation set]

description:
SAMPLE 501
Methylation data from brain tumor sample.


title: MNG, sample 504 [validation set]

description:
SAMPLE 504
Methylation data from brain tumor sample.


title: SFT HMPC, sample 489 [validation set]

description:
SAMPLE 489
Methylation data from brain tumor sample.

value: SFT HMPC


title: MB, G3, sample 490 [validation set]

description:
SAMPLE 490
Methylation data from brain tumor sample.


title: MB, G4, sample 487 [validation set]

description:
SAMPLE 487
Methylation data from brain tumor sample.


title: LGG, PA MID, sample 484 [validation set]

description:
SAMPLE 484
Methylation data from brain tumor sample.

value: LGG, PA MID


title: GBM, MES, sample 520 [validation set]

description:
SAMPLE 520
Methylation data from brain tumor sample.


title: MNG, sample 498 [validation set]

description:
SAMPLE 498
Methylation data from brain tumor sample.


title: LGG, PA/GG ST, sample 496 [validation set]

description:
SAMPLE 496
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: GBM, RTK I, sample 494 [validation set]

description:
SAMPLE 494
Methylation data from brain tumor sample.

value: GBM, RTK I


title: LGG, MYB, sample 482 [validation set]

description:
SAMPLE 482
Methylation data from brain tumor sample.

value: LGG, MYB


title: A IDH, HG, sample 479 [validation set]

description:
SAMPLE 479
Methylation data from brain tumor sample.

value: A IDH, HG


title: LGG, PA/GG ST, sample 476 [validation set]

description:
SAMPLE 476
Methylation data from brain tumor sample.


title: HMB, sample 478 [validation set]

description:
SAMPLE 478
Methylation data from brain tumor sample.

value: HMB


title: LGG, PA MID, sample 497 [validation set]

description:
SAMPLE 497
Methylation data from brain tumor sample.


title: A IDH, sample 473 [validation set]

description:
SAMPLE 473
Methylation data from brain tumor sample.

value: A IDH


title: A IDH, HG, sample 472 [validation set]

description:
SAMPLE 472
Methylation data from brain tumor sample.

value: brain tumor


title: LGG, PA PF, sample 471 [validation set]

description:
SAMPLE 471
Methylation data from brain tumor sample.


title: ANA PA, sample 488 [validation set]

description:
SAMPLE 488
Methylation data from brain tumor sample.

value: ANA PA


title: GBM, MYCN, sample 469 [validation set]

description:
SAMPLE 469
Methylation data from brain tumor sample.

value: GBM, MYCN


title: MB, G4, sample 485 [validation set]

description:
SAMPLE 485
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 475 [validation set]

description:
SAMPLE 475
Methylation data from brain tumor sample.

value: LGG, PA PF


title: GBM, RTK I, sample 477 [validation set]

description:
SAMPLE 477
Methylation data from brain tumor sample.


title: O IDH, sample 483 [validation set]

description:
SAMPLE 483
Methylation data from brain tumor sample.

value: O IDH


title: GBM, RTK II, sample 486 [validation set]

description:
SAMPLE 486
Methylation data from brain tumor sample.

value: GBM, RTK II


title: MB, G4, sample 466 [validation set]

description:
SAMPLE 466
Methylation data from brain tumor sample.

value: MB, G4


title: ETMR, sample 464 [validation set]

description:
SAMPLE 464
Methylation data from brain tumor sample.

value: ETMR


title: A IDH, sample 460 [validation set]

description:
SAMPLE 460
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 463 [validation set]

description:
SAMPLE 463
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 468 [validation set]

description:
SAMPLE 468
Methylation data from brain tumor sample.


title: DMG, K27, sample 457 [validation set]

description:
SAMPLE 457
Methylation data from brain tumor sample.

value: DMG, K27


title: MB, G4, sample 465 [validation set]

description:
SAMPLE 465
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 456 [validation set]

description:
SAMPLE 456
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 461 [validation set]

description:
SAMPLE 461
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: EPN, RELA, sample 458 [validation set]

description:
SAMPLE 458
Methylation data from brain tumor sample.

value: EPN, RELA


title: LGG, PA MID, sample 462 [validation set]

description:
SAMPLE 462
Methylation data from brain tumor sample.

value: LGG, PA MID


title: LGG, PA PF, sample 459 [validation set]

description:
SAMPLE 459
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 451 [validation set]

description:
SAMPLE 451
Methylation data from brain tumor sample.


title: GBM, RTK III, sample 450 [validation set]

description:
SAMPLE 450
Methylation data from brain tumor sample.

value: GBM, RTK III


title: ATRT, SHH, sample 444 [validation set]

description:
SAMPLE 444
Methylation data from brain tumor sample.

value: ATRT, SHH


title: O IDH, sample 442 [validation set]

description:
SAMPLE 442
Methylation data from brain tumor sample.


title: GBM, MES, sample 452 [validation set]

description:
SAMPLE 452
Methylation data from brain tumor sample.

value: GBM, MES


title: MB, G3, sample 455 [validation set]

description:
SAMPLE 455
Methylation data from brain tumor sample.

value: MB, G3


title: GBM, G34, sample 454 [validation set]

description:
SAMPLE 454
Methylation data from brain tumor sample.

value: GBM, G34


title: GBM, RTK II, sample 448 [validation set]

description:
SAMPLE 448
Methylation data from brain tumor sample.

value: brain tumor


title: PITAD, TSH, sample 467 [validation set]

description:
SAMPLE 467
Methylation data from brain tumor sample.

value: PITAD, TSH


title: GBM, RTK II, sample 447 [validation set]

description:
SAMPLE 447
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 440 [validation set]

description:
SAMPLE 440
Methylation data from brain tumor sample.

value: GBM, RTK I


title: MB, WNT, sample 446 [validation set]

description:
SAMPLE 446
Methylation data from brain tumor sample.

value: MB, WNT


title: MNG, sample 436 [validation set]

description:
SAMPLE 436
Methylation data from brain tumor sample.

value: MNG


title: A IDH, sample 439 [validation set]

description:
SAMPLE 439
Methylation data from brain tumor sample.

value: A IDH


title: GBM, RTK II, sample 443 [validation set]

description:
SAMPLE 443
Methylation data from brain tumor sample.

value: GBM, RTK II


title: GBM, RTK II, sample 434 [validation set]

description:
SAMPLE 434
Methylation data from brain tumor sample.


title: MNG, sample 433 [validation set]

description:
SAMPLE 433
Methylation data from brain tumor sample.


title: LGG, GG, sample 431 [validation set]

description:
SAMPLE 431
Methylation data from brain tumor sample.

value: LGG, GG


title: A IDH, sample 453 [validation set]

description:
SAMPLE 453
Methylation data from brain tumor sample.


title: GBM, MES, sample 432 [validation set]

description:
SAMPLE 432
Methylation data from brain tumor sample.


title: O IDH, sample 430 [validation set]

description:
SAMPLE 430
Methylation data from brain tumor sample.

value: O IDH


title: ANA PA, sample 429 [validation set]

description:
SAMPLE 429
Methylation data from brain tumor sample.

value: ANA PA


title: HGNET, BCOR, sample 449 [validation set]

description:
SAMPLE 449
Methylation data from brain tumor sample.

value: HGNET, BCOR


title: MB, SHH CHL AD, sample 427 [validation set]

description:
SAMPLE 427
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: GBM, MES, sample 426 [validation set]

description:
SAMPLE 426
Methylation data from brain tumor sample.


title: LGG, PA/GG ST, sample 424 [validation set]

description:
SAMPLE 424
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: MNG, sample 437 [validation set]

description:
SAMPLE 437
Methylation data from brain tumor sample.


title: O IDH, sample 413 [validation set]

description:
SAMPLE 413
Methylation data from brain tumor sample.


title: MNG, sample 423 [validation set]

description:
SAMPLE 423
Methylation data from brain tumor sample.


title: EPN, MPE, sample 422 [validation set]

description:
SAMPLE 422
Methylation data from brain tumor sample.

value: EPN, MPE


title: GBM, RTK II, sample 416 [validation set]

description:
SAMPLE 416
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 441 [validation set]

description:
SAMPLE 441
Methylation data from brain tumor sample.


title: A IDH, HG, sample 428 [validation set]

description:
SAMPLE 428
Methylation data from brain tumor sample.

value: A IDH, HG


title: A IDH, sample 414 [validation set]

description:
SAMPLE 414
Methylation data from brain tumor sample.


title: MNG, sample 435 [validation set]

description:
SAMPLE 435
Methylation data from brain tumor sample.


title: A IDH, sample 415 [validation set]

description:
SAMPLE 415
Methylation data from brain tumor sample.


title: A IDH, sample 412 [validation set]

description:
SAMPLE 412
Methylation data from brain tumor sample.


title: GBM, RTK III, sample 419 [validation set]

description:
SAMPLE 419
Methylation data from brain tumor sample.

value: GBM, RTK III


title: EPN, PF A, sample 420 [validation set]

description:
SAMPLE 420
Methylation data from brain tumor sample.

value: EPN, PF A


title: PXA, sample 410 [validation set]

description:
SAMPLE 410
Methylation data from brain tumor sample.

value: brain tumor

value: PXA


title: MNG, sample 438 [validation set]

description:
SAMPLE 438
Methylation data from brain tumor sample.


title: PXA, sample 409 [validation set]

description:
SAMPLE 409
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 407 [validation set]

description:
SAMPLE 407
Methylation data from brain tumor sample.


title: PXA, sample 411 [validation set]

description:
SAMPLE 411
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 408 [validation set]

description:
SAMPLE 408
Methylation data from brain tumor sample.

value: GBM, RTK I


title: A IDH, sample 400 [validation set]

description:
SAMPLE 400
Methylation data from brain tumor sample.


title: MB, WNT, sample 406 [validation set]

description:
SAMPLE 406
Methylation data from brain tumor sample.

value: MB, WNT


title: MB, WNT, sample 405 [validation set]

description:
SAMPLE 405
Methylation data from brain tumor sample.


title: A IDH, HG, sample 403 [validation set]

description:
SAMPLE 403
Methylation data from brain tumor sample.


title: GBM, MYCN, sample 404 [validation set]

description:
SAMPLE 404
Methylation data from brain tumor sample.

value: GBM, MYCN


title: A IDH, HG, sample 397 [validation set]

description:
SAMPLE 397
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 402 [validation set]

description:
SAMPLE 402
Methylation data from brain tumor sample.


title: MNG, sample 425 [validation set]

description:
SAMPLE 425
Methylation data from brain tumor sample.

value: MNG


title: LGG, DNT, sample 401 [validation set]

description:
SAMPLE 401
Methylation data from brain tumor sample.

value: LGG, DNT


title: O IDH, sample 398 [validation set]

description:
SAMPLE 398
Methylation data from brain tumor sample.


title: O IDH, sample 390 [validation set]

description:
SAMPLE 390
Methylation data from brain tumor sample.


title: A IDH, HG, sample 389 [validation set]

description:
SAMPLE 389
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 384 [validation set]

description:
SAMPLE 384
Methylation data from brain tumor sample.

value: GBM, RTK II


title: A IDH, sample 394 [validation set]

description:
SAMPLE 394
Methylation data from brain tumor sample.

value: A IDH


title: GBM, RTK II, sample 396 [validation set]

description:
SAMPLE 396
Methylation data from brain tumor sample.


title: MB, G3, sample 395 [validation set]

description:
SAMPLE 395
Methylation data from brain tumor sample.

value: MB, G3


title: LGG, PA/GG ST, sample 387 [validation set]

description:
SAMPLE 387
Methylation data from brain tumor sample.


title: GBM, MES, sample 382 [validation set]

description:
SAMPLE 382
Methylation data from brain tumor sample.

value: GBM, MES


title: A IDH, sample 399 [validation set]

description:
SAMPLE 399
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 391 [validation set]

description:
SAMPLE 391
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 386 [validation set]

description:
SAMPLE 386
Methylation data from brain tumor sample.


title: HGNET, MN1, sample 379 [validation set]

description:
SAMPLE 379
Methylation data from brain tumor sample.

value: HGNET, MN1


title: DLGNT, sample 385 [validation set]

description:
SAMPLE 385
Methylation data from brain tumor sample.

value: DLGNT


title: GBM, RTK II, sample 393 [validation set]

description:
SAMPLE 393
Methylation data from brain tumor sample.


title: A IDH, sample 388 [validation set]

description:
SAMPLE 388
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 383 [validation set]

description:
SAMPLE 383
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: GBM, MID, sample 381 [validation set]

description:
SAMPLE 381
Methylation data from brain tumor sample.

value: GBM, MID


title: GBM, MES, sample 375 [validation set]

description:
SAMPLE 375
Methylation data from brain tumor sample.


title: DLGNT, sample 380 [validation set]

description:
SAMPLE 380
Methylation data from brain tumor sample.


title: ETMR, sample 372 [validation set]

description:
SAMPLE 372
Methylation data from brain tumor sample.

value: ETMR


title: GBM, RTK II, sample 392 [validation set]

description:
SAMPLE 392
Methylation data from brain tumor sample.


title: A IDH, HG, sample 374 [validation set]

description:
SAMPLE 374
Methylation data from brain tumor sample.

value: A IDH, HG


title: A IDH, sample 369 [validation set]

description:
SAMPLE 369
Methylation data from brain tumor sample.

value: brain tumor


title: ANA PA, sample 376 [validation set]

description:
SAMPLE 376
Methylation data from brain tumor sample.

value: ANA PA


title: LGG, PA/GG ST, sample 373 [validation set]

description:
SAMPLE 373
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: DMG, K27, sample 358 [validation set]

description:
SAMPLE 358
Methylation data from brain tumor sample.

value: DMG, K27


title: GBM, RTK II, sample 370 [validation set]

description:
SAMPLE 370
Methylation data from brain tumor sample.


title: A IDH, HG, sample 357 [validation set]

description:
SAMPLE 357
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 354 [validation set]

description:
SAMPLE 354
Methylation data from brain tumor sample.


title: GBM, MYCN, sample 352 [validation set]

description:
SAMPLE 352
Methylation data from brain tumor sample.

value: GBM, MYCN


title: EPN, PF A, sample 356 [validation set]

description:
SAMPLE 356
Methylation data from brain tumor sample.

value: EPN, PF A


title: MELAN, sample 365 [validation set]

description:
SAMPLE 365
Methylation data from brain tumor sample.

value: MELAN


title: GBM, MID, sample 361 [validation set]

description:
SAMPLE 361
Methylation data from brain tumor sample.


title: GBM, MES, sample 353 [validation set]

description:
SAMPLE 353
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 362 [validation set]

description:
SAMPLE 362
Methylation data from brain tumor sample.

value: GBM, RTK II


title: PXA, sample 363 [validation set]

description:
SAMPLE 363
Methylation data from brain tumor sample.

value: PXA


title: MNG, sample 377 [validation set]

description:
SAMPLE 377
Methylation data from brain tumor sample.

value: MNG


title: EPN, RELA, sample 360 [validation set]

description:
SAMPLE 360
Methylation data from brain tumor sample.

value: EPN, RELA


title: O IDH, sample 349 [validation set]

description:
SAMPLE 349
Methylation data from brain tumor sample.

value: O IDH


title: MB, SHH CHL AD, sample 359 [validation set]

description:
SAMPLE 359
Methylation data from brain tumor sample.


title: A IDH, sample 351 [validation set]

description:
SAMPLE 351
Methylation data from brain tumor sample.

value: A IDH


title: PXA, sample 364 [validation set]

description:
SAMPLE 364
Methylation data from brain tumor sample.


title: IHG, sample 366 [validation set]

description:
SAMPLE 366
Methylation data from brain tumor sample.

value: IHG


title: O IDH, sample 346 [validation set]

description:
SAMPLE 346
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 350 [validation set]

description:
SAMPLE 350
Methylation data from brain tumor sample.

value: GBM, RTK I


title: O IDH, sample 343 [validation set]

description:
SAMPLE 343
Methylation data from brain tumor sample.


title: O IDH, sample 367 [validation set]

description:
SAMPLE 367
Methylation data from brain tumor sample.


title: A IDH, sample 342 [validation set]

description:
SAMPLE 342
Methylation data from brain tumor sample.


title: O IDH, sample 368 [validation set]

description:
SAMPLE 368
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 341 [validation set]

description:
SAMPLE 341
Methylation data from brain tumor sample.


title: LGG, PA MID, sample 355 [validation set]

description:
SAMPLE 355
Methylation data from brain tumor sample.

value: LGG, PA MID


title: MB, SHH INF, sample 371 [validation set]

description:
SAMPLE 371
Methylation data from brain tumor sample.

value: MB, SHH INF


title: O IDH, sample 340 [validation set]

description:
SAMPLE 340
Methylation data from brain tumor sample.

value: brain tumor


title: O IDH, sample 345 [validation set]

description:
SAMPLE 345
Methylation data from brain tumor sample.


title: PXA, sample 339 [validation set]

description:
SAMPLE 339
Methylation data from brain tumor sample.


title: IHG, sample 333 [validation set]

description:
SAMPLE 333
Methylation data from brain tumor sample.


title: HGNET, BCOR, sample 337 [validation set]

description:
SAMPLE 337
Methylation data from brain tumor sample.

value: HGNET, BCOR


title: MNG, sample 332 [validation set]

description:
SAMPLE 332
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 335 [validation set]

description:
SAMPLE 335
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: GBM, RTK II, sample 347 [validation set]

description:
SAMPLE 347
Methylation data from brain tumor sample.


title: GBM, G34, sample 329 [validation set]

description:
SAMPLE 329
Methylation data from brain tumor sample.

value: GBM, G34


title: O IDH, sample 325 [validation set]

description:
SAMPLE 325
Methylation data from brain tumor sample.


title: DMG, K27, sample 331 [validation set]

description:
SAMPLE 331
Methylation data from brain tumor sample.

value: DMG, K27


title: LGG, GG, sample 323 [validation set]

description:
SAMPLE 323
Methylation data from brain tumor sample.

value: LGG, GG


title: GBM, MES, sample 321 [validation set]

description:
SAMPLE 321
Methylation data from brain tumor sample.

value: GBM, MES


title: MB, SHH CHL AD, sample 328 [validation set]

description:
SAMPLE 328
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 322 [validation set]

description:
SAMPLE 322
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 330 [validation set]

description:
SAMPLE 330
Methylation data from brain tumor sample.

value: LGG, PA PF


title: GBM, MES, sample 336 [validation set]

description:
SAMPLE 336
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 320 [validation set]

description:
SAMPLE 320
Methylation data from brain tumor sample.


title: SCHW, MEL, sample 316 [validation set]

description:
SAMPLE 316
Methylation data from brain tumor sample.

value: SCHW, MEL


title: DMG, K27, sample 318 [validation set]

description:
SAMPLE 318
Methylation data from brain tumor sample.


title: LGG, MYB, sample 324 [validation set]

description:
SAMPLE 324
Methylation data from brain tumor sample.

value: LGG, MYB


title: A IDH, sample 327 [validation set]

description:
SAMPLE 327
Methylation data from brain tumor sample.


title: MB, G4, sample 315 [validation set]

description:
SAMPLE 315
Methylation data from brain tumor sample.

value: MB, G4


title: MNG, sample 313 [validation set]

description:
SAMPLE 313
Methylation data from brain tumor sample.

value: MNG


title: MB, G4, sample 319 [validation set]

description:
SAMPLE 319
Methylation data from brain tumor sample.


title: O IDH, sample 317 [validation set]

description:
SAMPLE 317
Methylation data from brain tumor sample.

value: O IDH


title: ANA PA, sample 326 [validation set]

description:
SAMPLE 326
Methylation data from brain tumor sample.

value: ANA PA


title: GBM, RTK II, sample 309 [validation set]

description:
SAMPLE 309
Methylation data from brain tumor sample.

value: GBM, RTK II


title: PXA, sample 307 [validation set]

description:
SAMPLE 307
Methylation data from brain tumor sample.

value: PXA


title: GBM, MES, sample 348 [validation set]

description:
SAMPLE 348
Methylation data from brain tumor sample.


title: O IDH, sample 314 [validation set]

description:
SAMPLE 314
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 312 [validation set]

description:
SAMPLE 312
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 334 [validation set]

description:
SAMPLE 334
Methylation data from brain tumor sample.


title: EWS, sample 306 [validation set]

description:
SAMPLE 306
Methylation data from brain tumor sample.

value: EWS


title: PXA, sample 308 [validation set]

description:
SAMPLE 308
Methylation data from brain tumor sample.

value: brain tumor


title: GBM, MES, sample 303 [validation set]

description:
SAMPLE 303
Methylation data from brain tumor sample.


title: O IDH, sample 305 [validation set]

description:
SAMPLE 305
Methylation data from brain tumor sample.


title: A IDH, sample 302 [validation set]

description:
SAMPLE 302
Methylation data from brain tumor sample.

value: A IDH


title: LGG, PA PF, sample 301 [validation set]

description:
SAMPLE 301
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 310 [validation set]

description:
SAMPLE 310
Methylation data from brain tumor sample.


title: GBM, MES, sample 292 [validation set]

description:
SAMPLE 292
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 298 [validation set]

description:
SAMPLE 298
Methylation data from brain tumor sample.


title: GBM, MES, sample 296 [validation set]

description:
SAMPLE 296
Methylation data from brain tumor sample.


title: O IDH, sample 299 [validation set]

description:
SAMPLE 299
Methylation data from brain tumor sample.


title: GBM, MES, sample 291 [validation set]

description:
SAMPLE 291
Methylation data from brain tumor sample.


title: A IDH, sample 290 [validation set]

description:
SAMPLE 290
Methylation data from brain tumor sample.


title: DMG, K27, sample 304 [validation set]

description:
SAMPLE 304
Methylation data from brain tumor sample.


title: LGG, PA MID, sample 289 [validation set]

description:
SAMPLE 289
Methylation data from brain tumor sample.

value: LGG, PA MID


title: MNG, sample 286 [validation set]

description:
SAMPLE 286
Methylation data from brain tumor sample.


title: O IDH, sample 288 [validation set]

description:
SAMPLE 288
Methylation data from brain tumor sample.


title: HGNET, MN1, sample 287 [validation set]

description:
SAMPLE 287
Methylation data from brain tumor sample.

value: HGNET, MN1


title: LGG, PA PF, sample 295 [validation set]

description:
SAMPLE 295
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 284 [validation set]

description:
SAMPLE 284
Methylation data from brain tumor sample.

value: GBM, RTK I


title: GBM, MES, sample 285 [validation set]

description:
SAMPLE 285
Methylation data from brain tumor sample.


title: GBM, MES, sample 283 [validation set]

description:
SAMPLE 283
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 282 [validation set]

description:
SAMPLE 282
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: A IDH, sample 281 [validation set]

description:
SAMPLE 281
Methylation data from brain tumor sample.


title: A IDH, HG, sample 280 [validation set]

description:
SAMPLE 280
Methylation data from brain tumor sample.

value: A IDH, HG


title: MB, SHH INF, sample 279 [validation set]

description:
SAMPLE 279
Methylation data from brain tumor sample.

value: MB, SHH INF


title: GBM, MES, sample 294 [validation set]

description:
SAMPLE 294
Methylation data from brain tumor sample.

value: GBM, MES


title: MB, G4, sample 300 [validation set]

description:
SAMPLE 300
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 278 [validation set]

description:
SAMPLE 278
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 293 [validation set]

description:
SAMPLE 293
Methylation data from brain tumor sample.


title: GBM, MES, sample 277 [validation set]

description:
SAMPLE 277
Methylation data from brain tumor sample.


title: LGG, MYB, sample 275 [validation set]

description:
SAMPLE 275
Methylation data from brain tumor sample.

value: LGG, MYB


title: PXA, sample 274 [validation set]

description:
SAMPLE 274
Methylation data from brain tumor sample.


title: A IDH, HG, sample 276 [validation set]

description:
SAMPLE 276
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 273 [validation set]

description:
SAMPLE 273
Methylation data from brain tumor sample.


title: GBM, MES, sample 271 [validation set]

description:
SAMPLE 271
Methylation data from brain tumor sample.


title: MNG, sample 265 [validation set]

description:
SAMPLE 265
Methylation data from brain tumor sample.


title: GBM, MES, sample 267 [validation set]

description:
SAMPLE 267
Methylation data from brain tumor sample.


title: LGG, PA MID, sample 268 [validation set]

description:
SAMPLE 268
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 270 [validation set]

description:
SAMPLE 270
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 261 [validation set]

description:
SAMPLE 261
Methylation data from brain tumor sample.


title: GBM, MYCN, sample 262 [validation set]

description:
SAMPLE 262
Methylation data from brain tumor sample.

value: GBM, MYCN


title: A IDH, HG, sample 263 [validation set]

description:
SAMPLE 263
Methylation data from brain tumor sample.


title: GBM, MID, sample 264 [validation set]

description:
SAMPLE 264
Methylation data from brain tumor sample.

value: GBM, MID


title: GBM, RTK II, sample 266 [validation set]

description:
SAMPLE 266
Methylation data from brain tumor sample.


title: O IDH, sample 257 [validation set]

description:
SAMPLE 257
Methylation data from brain tumor sample.

value: O IDH


title: GBM, MES, sample 255 [validation set]

description:
SAMPLE 255
Methylation data from brain tumor sample.


title: MB, G3, sample 260 [validation set]

description:
SAMPLE 260
Methylation data from brain tumor sample.

value: MB, G3


title: GBM, RTK II, sample 259 [validation set]

description:
SAMPLE 259
Methylation data from brain tumor sample.

value: GBM, RTK II


title: GBM, MES, sample 247 [validation set]

description:
SAMPLE 247
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 248 [validation set]

description:
SAMPLE 248
Methylation data from brain tumor sample.


title: EPN, PF A, sample 272 [validation set]

description:
SAMPLE 272
Methylation data from brain tumor sample.

value: EPN, PF A


title: LGG, PA/GG ST, sample 253 [validation set]

description:
SAMPLE 253
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: MB, G4, sample 252 [validation set]

description:
SAMPLE 252
Methylation data from brain tumor sample.

value: brain tumor

value: MB, G4


title: MB, SHH INF, sample 245 [validation set]

description:
SAMPLE 245
Methylation data from brain tumor sample.


title: MNG, sample 251 [validation set]

description:
SAMPLE 251
Methylation data from brain tumor sample.

value: MNG


title: GBM, RTK I, sample 243 [validation set]

description:
SAMPLE 243
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 244 [validation set]

description:
SAMPLE 244
Methylation data from brain tumor sample.


title: A IDH, HG, sample 242 [validation set]

description:
SAMPLE 242
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 240 [validation set]

description:
SAMPLE 240
Methylation data from brain tumor sample.

value: LGG, PA PF


title: MB, G4, sample 236 [validation set]

description:
SAMPLE 236
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 241 [validation set]

description:
SAMPLE 241
Methylation data from brain tumor sample.


title: MB, G4, sample 237 [validation set]

description:
SAMPLE 237
Methylation data from brain tumor sample.


title: MELCYT, sample 256 [validation set]

description:
SAMPLE 256
Methylation data from brain tumor sample.

value: MELCYT


title: MB, SHH CHL AD, sample 234 [validation set]

description:
SAMPLE 234
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: A IDH, sample 254 [validation set]

description:
SAMPLE 254
Methylation data from brain tumor sample.

value: A IDH


title: A IDH, HG, sample 232 [validation set]

description:
SAMPLE 232
Methylation data from brain tumor sample.

value: A IDH, HG


title: PIN T, PPT, sample 231 [validation set]

description:
SAMPLE 231
Methylation data from brain tumor sample.

value: PIN T, PPT


title: A IDH, HG, sample 230 [validation set]

description:
SAMPLE 230
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 250 [validation set]

description:
SAMPLE 250
Methylation data from brain tumor sample.

value: GBM, RTK I


title: MB, G3, sample 233 [validation set]

description:
SAMPLE 233
Methylation data from brain tumor sample.


title: DMG, K27, sample 226 [validation set]

description:
SAMPLE 226
Methylation data from brain tumor sample.

value: DMG, K27


title: DMG, K27, sample 227 [validation set]

description:
SAMPLE 227
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 225 [validation set]

description:
SAMPLE 225
Methylation data from brain tumor sample.


title: A IDH, sample 228 [validation set]

description:
SAMPLE 228
Methylation data from brain tumor sample.


title: DMG, K27, sample 224 [validation set]

description:
SAMPLE 224
Methylation data from brain tumor sample.


title: A IDH, sample 223 [validation set]

description:
SAMPLE 223
Methylation data from brain tumor sample.


title: A IDH, HG, sample 219 [validation set]

description:
SAMPLE 219
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 222 [validation set]

description:
SAMPLE 222
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 217 [validation set]

description:
SAMPLE 217
Methylation data from brain tumor sample.


title: EPN, MPE, sample 221 [validation set]

description:
SAMPLE 221
Methylation data from brain tumor sample.

value: EPN, MPE


title: O IDH, sample 218 [validation set]

description:
SAMPLE 218
Methylation data from brain tumor sample.

value: O IDH


title: A IDH, HG, sample 216 [validation set]

description:
SAMPLE 216
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 214 [validation set]

description:
SAMPLE 214
Methylation data from brain tumor sample.


title: A IDH, HG, sample 246 [validation set]

description:
SAMPLE 246
Methylation data from brain tumor sample.


title: O IDH, sample 213 [validation set]

description:
SAMPLE 213
Methylation data from brain tumor sample.


title: O IDH, sample 215 [validation set]

description:
SAMPLE 215
Methylation data from brain tumor sample.


title: O IDH, sample 212 [validation set]

description:
SAMPLE 212
Methylation data from brain tumor sample.


title: A IDH, HG, sample 235 [validation set]

description:
SAMPLE 235
Methylation data from brain tumor sample.


title: LGG, PA MID, sample 210 [validation set]

description:
SAMPLE 210
Methylation data from brain tumor sample.

value: LGG, PA MID


title: PXA, sample 229 [validation set]

description:
SAMPLE 229
Methylation data from brain tumor sample.

value: PXA


title: A IDH, sample 207 [validation set]

description:
SAMPLE 207
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 209 [validation set]

description:
SAMPLE 209
Methylation data from brain tumor sample.


title: GBM, MES, sample 208 [validation set]

description:
SAMPLE 208
Methylation data from brain tumor sample.

value: GBM, MES


title: PITAD, ACTH, sample 205 [validation set]

description:
SAMPLE 205
Methylation data from brain tumor sample.

value: PITAD, ACTH


title: O IDH, sample 206 [validation set]

description:
SAMPLE 206
Methylation data from brain tumor sample.

value: brain tumor


title: GBM, MES, sample 204 [validation set]

description:
SAMPLE 204
Methylation data from brain tumor sample.


title: O IDH, sample 203 [validation set]

description:
SAMPLE 203
Methylation data from brain tumor sample.


title: MB, G3, sample 200 [validation set]

description:
SAMPLE 200
Methylation data from brain tumor sample.

value: MB, G3


title: ANA PA, sample 202 [validation set]

description:
SAMPLE 202
Methylation data from brain tumor sample.

value: ANA PA


title: MB, SHH INF, sample 201 [validation set]

description:
SAMPLE 201
Methylation data from brain tumor sample.

value: MB, SHH INF


title: GBM, RTK I, sample 198 [validation set]

description:
SAMPLE 198
Methylation data from brain tumor sample.


title: A IDH, sample 197 [validation set]

description:
SAMPLE 197
Methylation data from brain tumor sample.


title: PGG, nC, sample 196 [validation set]

description:
SAMPLE 196
Methylation data from brain tumor sample.

value: PGG, nC


title: MELCYT, sample 195 [validation set]

description:
SAMPLE 195
Methylation data from brain tumor sample.

value: MELCYT


title: O IDH, sample 194 [validation set]

description:
SAMPLE 194
Methylation data from brain tumor sample.


title: GBM, MES, sample 193 [validation set]

description:
SAMPLE 193
Methylation data from brain tumor sample.


title: MB, G4, sample 192 [validation set]

description:
SAMPLE 192
Methylation data from brain tumor sample.

value: MB, G4


title: GBM, RTK II, sample 189 [validation set]

description:
SAMPLE 189
Methylation data from brain tumor sample.

value: GBM, RTK II


title: SCHW, sample 191 [validation set]

description:
SAMPLE 191
Methylation data from brain tumor sample.

value: SCHW


title: LIPN, sample 190 [validation set]

description:
SAMPLE 190
Methylation data from brain tumor sample.

value: LIPN


title: DMG, K27, sample 187 [validation set]

description:
SAMPLE 187
Methylation data from brain tumor sample.

value: DMG, K27


title: LGG, RGNT, sample 184 [validation set]

description:
SAMPLE 184
Methylation data from brain tumor sample.

value: LGG, RGNT


title: LGG, DNT, sample 185 [validation set]

description:
SAMPLE 185
Methylation data from brain tumor sample.

value: LGG, DNT


title: MB, G4, sample 181 [validation set]

description:
SAMPLE 181
Methylation data from brain tumor sample.


title: A IDH, sample 178 [validation set]

description:
SAMPLE 178
Methylation data from brain tumor sample.

value: A IDH


title: LGG, DNT, sample 179 [validation set]

description:
SAMPLE 179
Methylation data from brain tumor sample.


title: ATRT, SHH, sample 177 [validation set]

description:
SAMPLE 177
Methylation data from brain tumor sample.

value: ATRT, SHH


title: DMG, K27, sample 176 [validation set]

description:
SAMPLE 176
Methylation data from brain tumor sample.


title: MB, G4, sample 175 [validation set]

description:
SAMPLE 175
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 172 [validation set]

description:
SAMPLE 172
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: ANA PA, sample 171 [validation set]

description:
SAMPLE 171
Methylation data from brain tumor sample.


title: GBM, MES, sample 173 [validation set]

description:
SAMPLE 173
Methylation data from brain tumor sample.

value: GBM, MES


title: LGG, PA PF, sample 166 [validation set]

description:
SAMPLE 166
Methylation data from brain tumor sample.

value: brain tumor

value: LGG, PA PF


title: A IDH, sample 167 [validation set]

description:
SAMPLE 167
Methylation data from brain tumor sample.


title: MNG, sample 168 [validation set]

description:
SAMPLE 168
Methylation data from brain tumor sample.

value: MNG


title: MB, SHH CHL AD, sample 162 [validation set]

description:
SAMPLE 162
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 182 [validation set]

description:
SAMPLE 182
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 164 [validation set]

description:
SAMPLE 164
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 159 [validation set]

description:
SAMPLE 159
Methylation data from brain tumor sample.


title: MB, SHH INF, sample 155 [validation set]

description:
SAMPLE 155
Methylation data from brain tumor sample.

value: MB, SHH INF


title: MB, G4, sample 186 [validation set]

description:
SAMPLE 186
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 158 [validation set]

description:
SAMPLE 158
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 160 [validation set]

description:
SAMPLE 160
Methylation data from brain tumor sample.


title: A IDH, HG, sample 161 [validation set]

description:
SAMPLE 161
Methylation data from brain tumor sample.

value: A IDH, HG


title: A IDH, sample 188 [validation set]

description:
SAMPLE 188
Methylation data from brain tumor sample.


title: ANA PA, sample 154 [validation set]

description:
SAMPLE 154
Methylation data from brain tumor sample.

value: ANA PA


title: GBM, MES, sample 174 [validation set]

description:
SAMPLE 174
Methylation data from brain tumor sample.


title: ENB, A, sample 156 [validation set]

description:
SAMPLE 156
Methylation data from brain tumor sample.

value: ENB, A


title: GBM, MYCN, sample 152 [validation set]

description:
SAMPLE 152
Methylation data from brain tumor sample.

value: GBM, MYCN


title: PLEX, PED B, sample 147 [validation set]

description:
SAMPLE 147
Methylation data from brain tumor sample.

value: PLEX, PED B


title: PXA, sample 151 [validation set]

description:
SAMPLE 151
Methylation data from brain tumor sample.

value: PXA


title: LGG, PA PF, sample 163 [validation set]

description:
SAMPLE 163
Methylation data from brain tumor sample.


title: GBM, MID, sample 148 [validation set]

description:
SAMPLE 148
Methylation data from brain tumor sample.

value: GBM, MID


title: PITAD, STH DNS B, sample 150 [validation set]

description:
SAMPLE 150
Methylation data from brain tumor sample.

value: PITAD, STH DNS B


title: LGG, PA MID, sample 169 [validation set]

description:
SAMPLE 169
Methylation data from brain tumor sample.

value: LGG, PA MID


title: EPN, PF A, sample 153 [validation set]

description:
SAMPLE 153
Methylation data from brain tumor sample.

value: EPN, PF A


title: EPN, PF A, sample 170 [validation set]

description:
SAMPLE 170
Methylation data from brain tumor sample.


title: MB, G3, sample 146 [validation set]

description:
SAMPLE 146
Methylation data from brain tumor sample.

value: MB, G3


title: MELAN, sample 143 [validation set]

description:
SAMPLE 143
Methylation data from brain tumor sample.

value: MELAN


title: SCHW, sample 144 [validation set]

description:
SAMPLE 144
Methylation data from brain tumor sample.

value: SCHW


title: LGG, RGNT, sample 142 [validation set]

description:
SAMPLE 142
Methylation data from brain tumor sample.

value: brain tumor

value: LGG, RGNT


title: LGG, PA PF, sample 149 [validation set]

description:
SAMPLE 149
Methylation data from brain tumor sample.

value: LGG, PA PF


title: LGG, PA PF, sample 140 [validation set]

description:
SAMPLE 140
Methylation data from brain tumor sample.


title: LGG, PA MID, sample 145 [validation set]

description:
SAMPLE 145
Methylation data from brain tumor sample.


title: MB, SHH CHL AD, sample 141 [validation set]

description:
SAMPLE 141
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: A IDH, HG, sample 137 [validation set]

description:
SAMPLE 137
Methylation data from brain tumor sample.

value: A IDH, HG


title: GBM, RTK II, sample 139 [validation set]

description:
SAMPLE 139
Methylation data from brain tumor sample.

value: GBM, RTK II


title: DMG, K27, sample 136 [validation set]

description:
SAMPLE 136
Methylation data from brain tumor sample.

value: DMG, K27


title: O IDH, sample 133 [validation set]

description:
SAMPLE 133
Methylation data from brain tumor sample.

value: O IDH


title: A IDH, sample 135 [validation set]

description:
SAMPLE 135
Methylation data from brain tumor sample.

value: A IDH


title: MNG, sample 128 [validation set]

description:
SAMPLE 128
Methylation data from brain tumor sample.

value: MNG


title: GBM, RTK II, sample 131 [validation set]

description:
SAMPLE 131
Methylation data from brain tumor sample.


title: LGG, GG, sample 129 [validation set]

description:
SAMPLE 129
Methylation data from brain tumor sample.

value: LGG, GG


title: GBM, RTK II, sample 134 [validation set]

description:
SAMPLE 134
Methylation data from brain tumor sample.


title: GBM, MID, sample 132 [validation set]

description:
SAMPLE 132
Methylation data from brain tumor sample.

value: GBM, MID


title: ANA PA, sample 120 [validation set]

description:
SAMPLE 120
Methylation data from brain tumor sample.

value: ANA PA


title: O IDH, sample 122 [validation set]

description:
SAMPLE 122
Methylation data from brain tumor sample.


title: DMG, K27, sample 119 [validation set]

description:
SAMPLE 119
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 118 [validation set]

description:
SAMPLE 118
Methylation data from brain tumor sample.


title: LGG, PA/GG ST, sample 125 [validation set]

description:
SAMPLE 125
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: GBM, MES, sample 114 [validation set]

description:
SAMPLE 114
Methylation data from brain tumor sample.

value: GBM, MES


title: GBM, RTK I, sample 126 [validation set]

description:
SAMPLE 126
Methylation data from brain tumor sample.

value: GBM, RTK I


title: SUBEPN, SPINE, sample 121 [validation set]

description:
SAMPLE 121
Methylation data from brain tumor sample.

value: SUBEPN, SPINE


title: ANA PA, sample 124 [validation set]

description:
SAMPLE 124
Methylation data from brain tumor sample.

value: brain tumor


title: A IDH, HG, sample 116 [validation set]

description:
SAMPLE 116
Methylation data from brain tumor sample.


title: LGG, DNT, sample 110 [validation set]

description:
SAMPLE 110
Methylation data from brain tumor sample.

value: LGG, DNT


title: O IDH, sample 109 [validation set]

description:
SAMPLE 109
Methylation data from brain tumor sample.


title: ANA PA, sample 111 [validation set]

description:
SAMPLE 111
Methylation data from brain tumor sample.


title: MB, SHH INF, sample 117 [validation set]

description:
SAMPLE 117
Methylation data from brain tumor sample.

value: MB, SHH INF


title: PXA, sample 115 [validation set]

description:
SAMPLE 115
Methylation data from brain tumor sample.

value: PXA


title: ANA PA, sample 112 [validation set]

description:
SAMPLE 112
Methylation data from brain tumor sample.


title: O IDH, sample 108 [validation set]

description:
SAMPLE 108
Methylation data from brain tumor sample.


title: MNG, sample 104 [validation set]

description:
SAMPLE 104
Methylation data from brain tumor sample.


title: O IDH, sample 105 [validation set]

description:
SAMPLE 105
Methylation data from brain tumor sample.


title: MB, G4, sample 113 [validation set]

description:
SAMPLE 113
Methylation data from brain tumor sample.

value: MB, G4


title: MB, G4, sample 102 [validation set]

description:
SAMPLE 102
Methylation data from brain tumor sample.


title: A IDH, HG, sample 107 [validation set]

description:
SAMPLE 107
Methylation data from brain tumor sample.

value: A IDH, HG


title: LGG, PA PF, sample 97 [validation set]

description:
SAMPLE 97
Methylation data from brain tumor sample.

value: LGG, PA PF


title: membrane_Control24_rep4

type: RNA

city: Ann Arbor

first: Richard

middle: C

last: McEachin

state: United States

address: 2800 Plymouth Road

department: DCM&B

country: USA

institute: University of Michigan

description: Gene expression data from cultured fetal membranes

hyb_protocol: {er manufacturer's instructions for Affymetrix Human Gene ST 2.1 hybridization kit

scan_protocol: Affymetrix Scanner 3000 7G, operated with AGCC software per manufacturer's instructions

data_processing: Data from 24 raw .CEL files were normalized using RMA with default parameters in R version 3.1.2.

label: biotin

molecule: total RNA

source_name: Fetal membrane obtained from consenting patient and cultured before GBS treatment or control

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

extract_protocol: Membrane punches were homogenized in RIPA buffer with Lysing matrix D beads using 2–40 s pulses with a 5 min rest on ice on a FastPrep instrument (MP Biosciences).

treatment_protocol: GBS treatment or vehicle control

value: Fetal membrane


title: membrane_GBS8_rep4


title: membrane_GBS4_rep4


title: membrane_Control8_rep4


title: membrane_Control4_rep4


title: GBM, MES, sample 98 [validation set]

description:
SAMPLE 98
Methylation data from brain tumor sample.


title: CN, sample 100 [validation set]

description:
SAMPLE 100
Methylation data from brain tumor sample.

value: CN


title: EWS, sample 99 [validation set]

description:
SAMPLE 99
Methylation data from brain tumor sample.

value: EWS


title: IHG, sample 106 [validation set]

description:
SAMPLE 106
Methylation data from brain tumor sample.

value: IHG


title: MB, G3, sample 95 [validation set]

description:
SAMPLE 95
Methylation data from brain tumor sample.

value: MB, G3


title: LGG, PA PF, sample 103 [validation set]

description:
SAMPLE 103
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 96 [validation set]

description:
SAMPLE 96
Methylation data from brain tumor sample.


title: membrane_Control24_rep3


title: membrane_GBS24hr_rep4


title: MB, SHH CHL AD, sample 93 [validation set]

description:
SAMPLE 93
Methylation data from brain tumor sample.

value: MB, SHH CHL AD


title: membrane_GBS8_rep2


title: membrane_Control8_rep3


title: membrane_GBS8_rep3


title: membrane_GBS24hr_rep3


title: membrane_GBS4_rep2


title: GBM, MYCN, sample 94 [validation set]

description:
SAMPLE 94
Methylation data from brain tumor sample.

value: GBM, MYCN


title: membrane_GBS4_rep3


title: membrane_Control24_rep2


title: GBM, MES, sample 89 [validation set]

description:
SAMPLE 89
Methylation data from brain tumor sample.

value: GBM, MES


title: membrane_Control4_rep2


title: ANA PA, sample 90 [validation set]

description:
SAMPLE 90
Methylation data from brain tumor sample.

value: ANA PA


title: membrane_Control8_rep2


title: A IDH, sample 87 [validation set]

description:
SAMPLE 87
Methylation data from brain tumor sample.

value: A IDH


title: membrane_Control24_rep1


title: GBM, G34, sample 88 [validation set]

description:
SAMPLE 88
Methylation data from brain tumor sample.

value: brain tumor

value: GBM, G34


title: membrane_GBS24_rep2


title: GBM, RTK II, sample 86 [validation set]

description:
SAMPLE 86
Methylation data from brain tumor sample.

value: GBM, RTK II


title: membrane_GBS24hr_rep1


title: LGG, PA MID, sample 92 [validation set]

description:
SAMPLE 92
Methylation data from brain tumor sample.

value: LGG, PA MID


title: GBM, MES, sample 83 [validation set]

description:
SAMPLE 83
Methylation data from brain tumor sample.


title: O IDH, sample 85 [validation set]

description:
SAMPLE 85
Methylation data from brain tumor sample.

value: O IDH


title: GBM, RTK I, sample 84 [validation set]

description:
SAMPLE 84
Methylation data from brain tumor sample.

value: GBM, RTK I


title: GBM, RTK II, sample 82 [validation set]

description:
SAMPLE 82
Methylation data from brain tumor sample.


title: membrane_Control8_rep1

description: Gene expression data from cultured fetal membranes


title: A IDH, sample 91 [validation set]

description:
SAMPLE 91
Methylation data from brain tumor sample.


title: membrane_Control4_rep3


title: membrane_Control4_rep1


title: GBM, MES, sample 81 [validation set]

description:
SAMPLE 81
Methylation data from brain tumor sample.


title: membrane_GBS8_rep1


title: knockout 4b

city: Coventry

first: Mark

last: Christian

address: Gibbet Hill Road

department: Division of Biomedical Sciences

country: United Kingdom

institute: University of Warwick

description:
KO-4b
replicate 4

hyb_protocol: The microarray (Illumina MouseWG-6 v2.0 Expression BeadChips) was performed by Source Bioscience (Nottingham, UK).

data_processing: The data were processed using lumi 2.10.0 in R and quantile normalized and unexpressed genes were removed.

organism: Mus musculus

source_name: knockout, interscapular brown adipose tissue

extract_protocol: Total RNA was extracted from mouse interscapular brown adipose tissues (wild type and Gpr120 knockout) using Trizol, following manufacturer's instructions

tag: strain

tag: genotype/variation

value: Gpr120 knockout

tag: age

value: 12 weeks

tag: Sex

value: male

value: brown adipose tissue


title: knockout 5b

description:
KO-5b
replicate 5

scan_protocol: The microarray (Illumina MouseWG-6 v2.0 Expression BeadChips) was performed by Source Bioscience (Nottingham, UK).


title: knockout 3b

description:
KO-3b
replicate 3

label_protocol: The microarray (Illumina MouseWG-6 v2.0 Expression BeadChips) was performed by Source Bioscience (Nottingham, UK).


title: knockout 1b

description:
KO-1b
replicate 1


title: membrane_GBS4_rep1

value: Fetal membrane


title: LGG, DNT, sample 78 [validation set]

description:
SAMPLE 78
Methylation data from brain tumor sample.

value: LGG, DNT


title: MELAN, sample 80 [validation set]

description:
SAMPLE 80
Methylation data from brain tumor sample.

value: MELAN


title: A IDH, sample 79 [validation set]

description:
SAMPLE 79
Methylation data from brain tumor sample.


title: MB, G4, sample 76 [validation set]

description:
SAMPLE 76
Methylation data from brain tumor sample.

value: MB, G4


title: PXA, sample 77 [validation set]

description:
SAMPLE 77
Methylation data from brain tumor sample.

value: PXA


title: LGG, PA/GG ST, sample 75 [validation set]

description:
SAMPLE 75
Methylation data from brain tumor sample.

value: LGG, PA/GG ST


title: wild type 6b

description:
WT-6b
replicate 6

source_name: wild type, interscapular brown adipose tissue

value: wild type


title: knockout 2b

description:
KO-2b
replicate 2


title: MB, G4, sample 73 [validation set]

description:
SAMPLE 73
Methylation data from brain tumor sample.

value: brain tumor


title: CHORDM, sample 71 [validation set]

description:
SAMPLE 71
Methylation data from brain tumor sample.

value: CHORDM


title: DMG, K27, sample 69 [validation set]

description:
SAMPLE 69
Methylation data from brain tumor sample.

value: DMG, K27


title: wild type 5b

description:
WT-5b
replicate 5


title: ANA PA, sample 68 [validation set]

description:
SAMPLE 68
Methylation data from brain tumor sample.

value: ANA PA


title: MNG, sample 70 [validation set]

description:
SAMPLE 70
Methylation data from brain tumor sample.

value: MNG


title: CNS NB, FOXR2, sample 72 [validation set]

description:
SAMPLE 72
Methylation data from brain tumor sample.

value: CNS NB, FOXR2


title: PLEX, PED B, sample 66 [validation set]

description:
SAMPLE 66
Methylation data from brain tumor sample.

value: PLEX, PED B


title: A IDH, sample 67 [validation set]

description:
SAMPLE 67
Methylation data from brain tumor sample.

value: A IDH


title: LGG, PA PF, sample 65 [validation set]

description:
SAMPLE 65
Methylation data from brain tumor sample.

value: LGG, PA PF


title: wild type 4b

description:
WT-4b
replicate 4

value: 12 weeks

value: male

value: brown adipose tissue


title: O IDH, sample 64 [validation set]

description:
SAMPLE 64
Methylation data from brain tumor sample.

value: O IDH


title: wild type 3b

description:
WT-3b
replicate 3


title: wild type 1b

description:
WT-1b
replicate 1


title: PXA, sample 58 [validation set]

description:
SAMPLE 58
Methylation data from brain tumor sample.


title: LGG, PA/GG ST, sample 59 [validation set]

description:
SAMPLE 59
Methylation data from brain tumor sample.


title: O IDH, sample 61 [validation set]

description:
SAMPLE 61
Methylation data from brain tumor sample.


title: wild type 2b

description:
WT-2b
replicate 2


title: CNS NB, FOXR2, sample 74 [validation set]

description:
SAMPLE 74
Methylation data from brain tumor sample.


title: MELCYT, sample 57 [validation set]

description:
SAMPLE 57
Methylation data from brain tumor sample.

value: MELCYT


title: GBM, MES, sample 51 [validation set]

description:
SAMPLE 51
Methylation data from brain tumor sample.

value: GBM, MES


title: GBM, RTK I, sample 54 [validation set]

description:
SAMPLE 54
Methylation data from brain tumor sample.

value: GBM, RTK I


title: O IDH, sample 50 [validation set]

description:
SAMPLE 50
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 55 [validation set]

description:
SAMPLE 55
Methylation data from brain tumor sample.

value: GBM, RTK II


title: MB, SHH CHL AD, sample 53 [validation set]

description:
SAMPLE 53
Methylation data from brain tumor sample.

value: brain tumor

value: MB, SHH CHL AD


title: GBM, MES, sample 48 [validation set]

description:
SAMPLE 48
Methylation data from brain tumor sample.


title: MNG, sample 46 [validation set]

description:
SAMPLE 46
Methylation data from brain tumor sample.


title: EPN, PF A, sample 49 [validation set]

description:
SAMPLE 49
Methylation data from brain tumor sample.

value: EPN, PF A


title: O IDH, sample 47 [validation set]

description:
SAMPLE 47
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 43 [validation set]

description:
SAMPLE 43
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 44 [validation set]

description:
SAMPLE 44
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 62 [validation set]

description:
SAMPLE 62
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 63 [validation set]

description:
SAMPLE 63
Methylation data from brain tumor sample.


title: GBM, MES, sample 41 [validation set]

description:
SAMPLE 41
Methylation data from brain tumor sample.


title: MNG, sample 42 [validation set]

description:
SAMPLE 42
Methylation data from brain tumor sample.


title: A IDH, sample 39 [validation set]

description:
SAMPLE 39
Methylation data from brain tumor sample.


title: DMG, K27, sample 37 [validation set]

description:
SAMPLE 37
Methylation data from brain tumor sample.

value: DMG, K27


title: GBM, MES, sample 40 [validation set]

description:
SAMPLE 40
Methylation data from brain tumor sample.


title: A IDH, HG, sample 36 [validation set]

description:
SAMPLE 36
Methylation data from brain tumor sample.

value: A IDH, HG


title: SCHW, MEL, sample 38 [validation set]

description:
SAMPLE 38
Methylation data from brain tumor sample.

value: SCHW, MEL


title: O IDH, sample 34 [validation set]

description:
SAMPLE 34
Methylation data from brain tumor sample.


title: GBM, MES, sample 32 [validation set]

description:
SAMPLE 32
Methylation data from brain tumor sample.


title: DMG, K27, sample 28 [validation set]

description:
SAMPLE 28
Methylation data from brain tumor sample.


title: O IDH, sample 31 [validation set]

description:
SAMPLE 31
Methylation data from brain tumor sample.


title: EPN, PF A, sample 29 [validation set]

description:
SAMPLE 29
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 45 [validation set]

description:
SAMPLE 45
Methylation data from brain tumor sample.


title: O IDH, sample 27 [validation set]

description:
SAMPLE 27
Methylation data from brain tumor sample.


title: MNG, sample 35 [validation set]

description:
SAMPLE 35
Methylation data from brain tumor sample.

value: MNG


title: MB, SHH INF, sample 24 [validation set]

description:
SAMPLE 24
Methylation data from brain tumor sample.

value: MB, SHH INF


title: GBM, RTK II, sample 33 [validation set]

description:
SAMPLE 33
Methylation data from brain tumor sample.


title: DMG, K27, sample 23 [validation set]

description:
SAMPLE 23
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 22 [validation set]

description:
SAMPLE 22
Methylation data from brain tumor sample.

value: LGG, PA PF


title: MB, G4, sample 26 [validation set]

description:
SAMPLE 26
Methylation data from brain tumor sample.

value: MB, G4


title: MNG, sample 20 [validation set]

description:
SAMPLE 20
Methylation data from brain tumor sample.


title: GBM, MES, sample 25 [validation set]

description:
SAMPLE 25
Methylation data from brain tumor sample.


title: A IDH, sample 21 [validation set]

description:
SAMPLE 21
Methylation data from brain tumor sample.

value: A IDH


title: GBM, RTK II, sample 18 [validation set]

description:
SAMPLE 18
Methylation data from brain tumor sample.


title: A IDH, sample 17 [validation set]

description:
SAMPLE 17
Methylation data from brain tumor sample.


title: DMG, K27, sample 14 [validation set]

description:
SAMPLE 14
Methylation data from brain tumor sample.


title: MNG, sample 19 [validation set]

description:
SAMPLE 19
Methylation data from brain tumor sample.


title: GBM, RTK I, sample 16 [validation set]

description:
SAMPLE 16
Methylation data from brain tumor sample.


title: MB, G4, sample 15 [validation set]

description:
SAMPLE 15
Methylation data from brain tumor sample.


title: GBM, MES, sample 12 [validation set]

description:
SAMPLE 12
Methylation data from brain tumor sample.


title: GBM, MES, sample 13 [validation set]

description:
SAMPLE 13
Methylation data from brain tumor sample.


title: GBM, MES, sample 11 [validation set]

description:
SAMPLE 11
Methylation data from brain tumor sample.


title: MNG, sample 9 [validation set]

description:
SAMPLE 9
Methylation data from brain tumor sample.


title: GBM, RTK II, sample 8 [validation set]

description:
SAMPLE 8
Methylation data from brain tumor sample.


title: LGG, PA PF, sample 7 [validation set]

description:
SAMPLE 7
Methylation data from brain tumor sample.


title: PITAD, FSH LH, sample 6 [validation set]

description:
SAMPLE 6
Methylation data from brain tumor sample.

value: PITAD, FSH LH


title: GBM, MYCN, sample 5 [validation set]

description:
SAMPLE 5
Methylation data from brain tumor sample.

value: GBM, MYCN


title: A IDH, sample 4 [validation set]

description:
SAMPLE 4
Methylation data from brain tumor sample.


title: GBM, MES, sample 3 [validation set]

description:
SAMPLE 3
Methylation data from brain tumor sample.


title: GBM, MES, sample 1 [validation set]

description:
SAMPLE 1
Methylation data from brain tumor sample.


title: MPM primary cell line of P95B

city: Zurich

first: Kathrin

last: Oehl

address: Schmelzbergstrasse 12

country: Switzerland

institute: University Hospital Zurich

description: hybridized to complementary probes on array

hyb_protocol: DNA was restriction digested, PCR amplified, labeled and hybridized to each array according to the manufacturer's instructions.

scan_protocol: The Arrays were washed using Affymetrix GeneCHIP 3000 fluidics stations, and scanned using the Gene Chip Scanner 3000.

data_processing: The array image was acquired using AGCC Scan Control Software v4.0.0.1567 (Affymetrix). AGCC Viewer v4.1.2.1567 (Affymetrix) was used for quality control. CEL files were automatically generated from the image files and OncoScan Console v1.3.0.39 (Affymetrix) was used for merging the two separate A/T and G/C signal CEL files into one OSCHP file using the FFPE Analysis NA33 reference model. CNV and LOH event analysis was performed using Nexus Express for OncoScan v3.1 (Affymetrix).

label: Biotin

source_name: MPM primary cell line of P95B

label_protocol: As per manufacturer (Affymetrix)

growth_protocol: Primary cell lines were cultured as described by Thurneysen et al, 2009, Lung Cancer.

extract_protocol: Genomic DNA was extracted using the Maxwell 16 FFPE Plus LEV DNA Purification Kit (Promega, for FFPE tissue samples) or the Maxwell 16 LEV Blood DNA Kit (Promega, for cell lines) according to the manufacturer's instructions. DNA quantity was assessed using Qubit Fluorometric Quantitation (Thermo Fisher).

tag: disease state

value: Malignant Pleural Mesothelioma

tag: gender

value: male

tag: sample type

value: primary cell line


title: MPM original tumor of P95B

source_name: MPM original FFPE tumor of P95B

value: original FFPE tumor


title: MPM primary cell line of P236A

source_name: MPM primary cell line of P236A

value: female


title: GBM, MES, sample 10 [validation set]

description:
SAMPLE 10
Methylation data from brain tumor sample.

value: brain tumor

value: GBM, MES


title: MPM original tumor of P236A

source_name: MPM original FFPE tumor of P236A


title: Ca_CGY1_pH7.6_1

type: SRA

city: Grenoble Cedex 9

first: Cécile

last: Garnaud

country: France

institute: CHU Grenoble Alpes

description: RIM101 overexpression strain, pH 7.6, replicate 1

library_source: transcriptomic

data_processing:
Reads were quality-checked using FastQC before and after cleaning by Trimmomatic applying default parameters (Bolger et al., 2014).
Reads were then aligned to the C. albicans SC5314 Assembly22 genome (C_albicans_SC5314_A22-s05-m05-r18_haploid, Candida Genome Database, www.candidagenome.org) using Bowtie2 (Langmead and Salzberg, 2012).
Raw read counts for each gene were calculated using HTSeqCount (Anders et al., 2015).
Read count data were analyzed using standard differential analysis pipeline proposed by the DESeq2 R-package.
Genome_build: C_albicans_SC5314_A22-s05-m05-r18_haploid (Candida Genome Database, www.candidagenome.org)
Supplementary_files_format_and_content: Tab-delimited text files. Include raw read counts for each gene calculated using HTSeqCount

organism: Candida albicans

growth_protocol: Each strain (SC5314, DAY25 and CGY1) was precultured overnight in liquid YPD medium at 30°C with agitation and then diluted to an OD600 of 0.1 in SC medium buffered at pH 7.6 or pH 4 with HEPES or citrate buffer,respectively. Cells were incubated at 30°C with agitation until an OD600 of 0.6 to 0.8 was reached and then were collected by centrifugation

extract_protocol:
MasterPure Yeast RNA purification kit (Epicentre) according to the manufacturer’s instructions.
standard RNA-Seq methods and Illumina technology

value: overexpressing RIM101

tag: ph


title: Ca_CGY1_pH4_3

description: RIM101 overexpression strain, pH 4, replicate 3


title: Ca_CGY1_pH4_1

description: RIM101 overexpression strain, pH 4, replicate 1


title: Ca_CGY1_pH7.6_3

description: RIM101 overexpression strain, pH 7.6, replicate 3


title: Ca_CGY1_pH4_2

description: RIM101 overexpression strain, pH 4, replicate 2


title: Ca_DAY25_pH7.6_3

description: rim101-/- mutant, pH 7.6, replicate 3

value: rim101-/- disrupted