title: CPH, ADM, sample 2195 [reference set]

value: CPH, ADM


title: GBM, RTK II, sample 2200 [reference set]

status: Public on Jan 14 2018

type: genomic

city: Heidelberg

first: Martin

last: Sill

address: Im Neuenheimer Feld 280

department: Division of Pediatric Neurooncology

country: Germany

institute: DKFZ

description: Methylation data from brain tumor sample.

hyb_protocol: Illumina protocol.

scan_protocol: Illumina iScan System according to the manufacturer's protocol

data_processing:
Bioconductor (Version 3.3) package minifi (Version 1.18) using function 'preprocessIllumina'
Average beta

label: biotin/DNP

molecule: genomic DNA

organism: Homo sapiens

source_name: brain tumor

label_protocol: Illumina protocol.

extract_protocol: Illumina protocol.

treatment_protocol: Extraction of high molecular weight DNA from frozen tumor samples was carried out by use of a salting-out method or by ultracentrifugation over cesium chloride.

tag: methylation class

value: GBM, RTK II

tag: material

value: FFPE


title: CPH, ADM, sample 2193 [reference set]

value: Frozen


title: GBM, MID, sample 2199 [reference set]

value: GBM, MID


title: O IDH, sample 2201 [reference set]

value: O IDH


title: CPH, ADM, sample 2194 [reference set]


title: CPH, PAP, sample 2196 [reference set]

value: CPH, PAP


title: CPH, PAP, sample 2192 [reference set]


title: CPH, ADM, sample 2190 [reference set]


title: CPH, PAP, sample 2197 [reference set]


title: A IDH, sample 2210 [reference set]

value: A IDH


title: CPH, ADM, sample 2188 [reference set]


title: CPH, ADM, sample 2189 [reference set]


title: O IDH, sample 2184 [reference set]


title: MELAN, sample 2214 [reference set]

value: MELAN


title: PIN T, PPT, sample 2182 [reference set]

value: PIN T, PPT


title: A IDH, sample 2185 [reference set]


title: ATRT, SHH, sample 2187 [reference set]

value: ATRT, SHH


title: A IDH, HG, sample 2179 [reference set]

value: A IDH, HG


title: GBM, MID, sample 2171 [reference set]


title: CPH, ADM, sample 2191 [reference set]


title: GBM, MES, sample 2181 [reference set]

value: GBM, MES


title: GBM, RTK II, sample 2172 [reference set]


title: GBM, MES, sample 2175 [reference set]


title: GBM, RTK II, sample 2174 [reference set]


title: O IDH, sample 2173 [reference set]


title: GBM, RTK I, sample 2180 [reference set]

value: GBM, RTK I


title: GBM, MES, sample 2169 [reference set]


title: GBM, G34, sample 2170 [reference set]

value: GBM, G34


title: PITUI, sample 2166 [reference set]

value: PITUI


title: ATRT, TYR, sample 2161 [reference set]

value: ATRT, TYR


title: ATRT, MYC, sample 2157 [reference set]

value: ATRT, MYC


title: CNS NB, FOXR2, sample 2186 [reference set]

value: CNS NB, FOXR2


title: ATRT, TYR, sample 2158 [reference set]


title: GBM, MYCN, sample 2151 [reference set]

value: GBM, MYCN

value: FFPE


title: ATRT, SHH, sample 2154 [reference set]

value: Frozen


title: ATRT, MYC, sample 2160 [reference set]


title: ATRT, TYR, sample 2156 [reference set]


title: GBM, RTK III, sample 2153 [reference set]

value: GBM, RTK III


title: GBM, MID, sample 2152 [reference set]

value: GBM, MID


title: GBM, MYCN, sample 2150 [reference set]


title: DLGNT, sample 2148 [reference set]

value: DLGNT


title: ATRT, SHH, sample 2155 [reference set]


title: A IDH, sample 2146 [reference set]

value: A IDH


title: GBM, RTK III, sample 2149 [reference set]


title: GBM, MES, sample 2147 [reference set]


title: GBM, RTK I, sample 2144 [reference set]


title: GBM, RTK II, sample 2142 [reference set]

value: GBM, RTK II


title: PLEX, PED B, sample 2137 [reference set]

value: PLEX, PED B


title: PLEX, PED B, sample 2138 [reference set]


title: GBM, RTK I, sample 2139 [reference set]


title: MB, G3, sample 2141 [reference set]

value: MB, G3


title: PLEX, PED B, sample 2135 [reference set]


title: GBM, RTK I, sample 2143 [reference set]


title: ATRT, SHH, sample 2159 [reference set]

value: ATRT, SHH


title: PLEX, AD, sample 2134 [reference set]

value: PLEX, AD


title: PLEX, PED B, sample 2133 [reference set]


title: PLEX, PED B, sample 2132 [reference set]


title: PLEX, PED B, sample 2131 [reference set]


title: PLEX, AD, sample 2129 [reference set]


title: GBM, RTK II, sample 2145 [reference set]


title: PLEX, PED B, sample 2128 [reference set]


title: PLEX, PED B, sample 2124 [reference set]


title: PLEX, PED A , sample 2120 [reference set]

value: PLEX, PED A


title: PLEX, AD, sample 2126 [reference set]


title: PLEX, PED B, sample 2125 [reference set]


title: PLEX, AD, sample 2127 [reference set]


title: PLEX, AD, sample 2123 [reference set]


title: PLEX, PED B, sample 2121 [reference set]


title: PLEX, PED B, sample 2122 [reference set]


title: PLEX, PED B, sample 2118 [reference set]


title: PLEX, PED A , sample 2119 [reference set]


title: PLEX, PED B, sample 2116 [reference set]


title: PLEX, PED B, sample 2113 [reference set]


title: PLEX, PED B, sample 2130 [reference set]


title: PLEX, PED B, sample 2108 [reference set]


title: PLEX, PED A , sample 2107 [reference set]


title: PLEX, PED A , sample 2106 [reference set]


title: PLEX, PED B, sample 2112 [reference set]


title: PLEX, PED B, sample 2104 [reference set]


title: PLEX, PED A , sample 2136 [reference set]


title: PLEX, PED B, sample 2111 [reference set]


title: PLEX, PED B, sample 2103 [reference set]


title: PLEX, PED B, sample 2115 [reference set]


title: PLEX, PED B, sample 2101 [reference set]


title: PLEX, PED A , sample 2105 [reference set]


title: PLEX, PED B, sample 2102 [reference set]


title: PLEX, PED B, sample 2117 [reference set]


title: PLEX, PED B, sample 2100 [reference set]


title: PLEX, PED B, sample 2109 [reference set]


title: PLEX, PED B, sample 2099 [reference set]


title: PLEX, PED B, sample 2114 [reference set]


title: PLEX, PED B, sample 2097 [reference set]


title: PLEX, AD, sample 2098 [reference set]


title: PLEX, PED A , sample 2094 [reference set]


title: PLEX, PED A , sample 2096 [reference set]


title: PLEX, PED B, sample 2092 [reference set]


title: PLEX, PED B, sample 2095 [reference set]


title: PLEX, PED B, sample 2090 [reference set]


title: PLEX, AD, sample 2110 [reference set]


title: PLEX, PED B, sample 2091 [reference set]


title: PLEX, PED A , sample 2089 [reference set]


title: PLEX, PED B, sample 2088 [reference set]


title: PLEX, PED B, sample 2086 [reference set]


title: PLEX, PED A , sample 2085 [reference set]


title: PLEX, PED B, sample 2087 [reference set]


title: PLEX, PED A , sample 2084 [reference set]


title: PLEX, PED B, sample 2079 [reference set]


title: PLEX, AD, sample 2082 [reference set]


title: PLEX, PED B, sample 2080 [reference set]


title: PLEX, PED B, sample 2078 [reference set]


title: ATRT, SHH, sample 2071 [reference set]


title: PLEX, PED B, sample 2077 [reference set]


title: GBM, RTK I, sample 2067 [reference set]

value: GBM, RTK I


title: ATRT, TYR, sample 2070 [reference set]

value: ATRT, TYR


title: PLEX, PED B, sample 2081 [reference set]


title: PLEX, AD, sample 2093 [reference set]


title: SFT HMPC, sample 2069 [reference set]

value: SFT HMPC


title: O IDH, sample 2064 [reference set]

value: O IDH


title: DMG, K27, sample 2065 [reference set]

value: DMG, K27


title: MB, WNT, sample 2061 [reference set]

value: MB, WNT

value: FFPE


title: EWS, sample 2058 [reference set]

value: EWS


title: O IDH, sample 2059 [reference set]


title: GBM, RTK II, sample 2055 [reference set]


title: O IDH, sample 2054 [reference set]


title: GBM, MES, sample 2056 [reference set]

value: GBM, MES


title: O IDH, sample 2052 [reference set]


title: HGNET, BCOR, sample 2063 [reference set]

value: HGNET, BCOR


title: LGG, PA PF, sample 2060 [reference set]

value: LGG, PA PF


title: PLEX, PED B, sample 2083 [reference set]


title: O IDH, sample 2053 [reference set]


title: HGNET, BCOR, sample 2051 [reference set]


title: GBM, MES, sample 2050 [reference set]


title: O IDH, sample 2066 [reference set]


title: LGG, SEGA, sample 2049 [reference set]

value: LGG, SEGA


title: HGNET, BCOR, sample 2041 [reference set]

value: Frozen


title: GBM, RTK II, sample 2038 [reference set]

value: GBM, RTK II


title: A IDH, sample 2036 [reference set]

value: A IDH


title: DMG, K27, sample 2037 [reference set]


title: A IDH, sample 2035 [reference set]


title: A IDH, sample 2032 [reference set]


title: O IDH, sample 2033 [reference set]


title: ATRT, MYC, sample 2029 [reference set]

value: ATRT, MYC


title: LGG, SEGA, sample 2030 [reference set]


title: O IDH, sample 2031 [reference set]


title: ATRT, MYC, sample 2027 [reference set]


title: O IDH, sample 2026 [reference set]


title: ATRT, SHH, sample 2028 [reference set]

value: ATRT, SHH


title: LGG, PA PF, sample 2024 [reference set]


title: GBM, G34, sample 2023 [reference set]

value: GBM, G34


title: LGG, DNT, sample 2018 [reference set]

value: LGG, DNT


title: A IDH, sample 2025 [reference set]


title: GBM, MES, sample 2017 [reference set]


title: GBM, RTK II, sample 2021 [reference set]


title: GBM, RTK I, sample 2016 [reference set]

value: GBM, RTK I


title: GBM, RTK II, sample 2019 [reference set]


title: ATRT, SHH, sample 2001 [reference set]


title: GBM, RTK II, sample 2015 [reference set]


title: A IDH, sample 2014 [reference set]


title: A IDH, sample 2034 [reference set]


title: SUBEPN, SPINE, sample 1996 [reference set]

value: SUBEPN, SPINE


title: GBM, MID, sample 1995 [reference set]

value: GBM, MID


title: LGG, DNT, sample 1997 [reference set]


title: SFT HMPC, sample 1999 [reference set]

value: SFT HMPC


title: GBM, RTK I, sample 1993 [reference set]

value: FFPE


title: ATRT, SHH, sample 1990 [reference set]


title: ATRT, SHH, sample 1991 [reference set]


title: LGG, PA PF, sample 2020 [reference set]


title: ATRT, TYR, sample 1988 [reference set]

value: ATRT, TYR


title: ATRT, SHH, sample 1987 [reference set]


title: ATRT, MYC, sample 1989 [reference set]


title: ATRT, SHH, sample 1986 [reference set]


title: ATRT, TYR, sample 1985 [reference set]


title: ATRT, SHH, sample 1984 [reference set]


title: ATRT, TYR, sample 1982 [reference set]


title: ATRT, MYC, sample 1983 [reference set]


title: ATRT, SHH, sample 1981 [reference set]


title: GBM, MES, sample 1976 [reference set]

value: GBM, MES


title: LGG, PA PF, sample 1978 [reference set]


title: ATRT, SHH, sample 1980 [reference set]


title: MB, SHH INF, sample 2000 [reference set]

value: MB, SHH INF


title: MB, G3, sample 1973 [reference set]

value: MB, G3


title: GBM, RTK II, sample 1974 [reference set]


title: GBM, MES, sample 1977 [reference set]


title: DMG, K27, sample 1972 [reference set]

value: DMG, K27


title: MB, G3, sample 1969 [reference set]


title: A IDH, sample 1992 [reference set]


title: EWS, sample 1968 [reference set]

value: EWS


title: DMG, K27, sample 1971 [reference set]


title: MELCYT, sample 1967 [reference set]

value: MELCYT


title: DMG, K27, sample 1963 [reference set]


title: GBM, MYCN, sample 1962 [reference set]

value: GBM, MYCN


title: ENB, B, sample 1966 [reference set]

value: ENB, B


title: DMG, K27, sample 1959 [reference set]


title: DMG, K27, sample 1960 [reference set]


title: EWS, sample 1958 [reference set]

value: Frozen


title: CNS NB, FOXR2, sample 1957 [reference set]

value: CNS NB, FOXR2


title: DMG, K27, sample 1935 [reference set]


title: SUBEPN, PF, sample 1942 [reference set]

value: SUBEPN, PF


title: CN, sample 1931 [reference set]

value: CN


title: LGG, PA PF, sample 1938 [reference set]

value: LGG, PA PF


title: MB, G4, sample 1932 [reference set]

value: MB, G4


title: A IDH, sample 1937 [reference set]

value: A IDH


title: LGG, PA PF, sample 1933 [reference set]

value: FFPE


title: PIN T, PPT, sample 1930 [reference set]

value: PIN T, PPT


title: A IDH, sample 1926 [reference set]


title: EFT, CIC, sample 1924 [reference set]

value: EFT, CIC


title: MB, G3, sample 1921 [reference set]


title: ATRT, TYR, sample 1922 [reference set]

value: ATRT, TYR


title: CN, sample 1920 [reference set]


title: ATRT, MYC, sample 1923 [reference set]

value: ATRT, MYC


title: CN, sample 1929 [reference set]


title: DMG, K27, sample 1961 [reference set]

value: DMG, K27


title: LGG, DNT, sample 1915 [reference set]

value: LGG, DNT


title: DMG, K27, sample 1914 [reference set]


title: LGG, PA MID, sample 1917 [reference set]

value: LGG, PA MID


title: LGG, SEGA, sample 1919 [reference set]

value: LGG, SEGA


title: DMG, K27, sample 1913 [reference set]


title: EWS, sample 1912 [reference set]

value: EWS


title: O IDH, sample 1910 [reference set]

value: O IDH


title: A IDH, sample 1911 [reference set]


title: O IDH, sample 1903 [reference set]

value: Frozen


title: A IDH, sample 1904 [reference set]


title: A IDH, sample 1902 [reference set]


title: A IDH, sample 1901 [reference set]


title: O IDH, sample 1928 [reference set]


title: A IDH, sample 1897 [reference set]


title: A IDH, sample 1899 [reference set]


title: A IDH, sample 1898 [reference set]


title: MB, SHH INF, sample 1894 [reference set]

value: MB, SHH INF


title: A IDH, sample 1895 [reference set]


title: A IDH, sample 1900 [reference set]


title: MB, SHH INF, sample 1890 [reference set]


title: MELCYT, sample 1927 [reference set]

value: MELCYT


title: MB, SHH CHL AD, sample 1892 [reference set]

value: MB, SHH CHL AD


title: MB, SHH INF, sample 1891 [reference set]


title: HGNET, BCOR, sample 1888 [reference set]

value: HGNET, BCOR


title: MB, SHH CHL AD, sample 1893 [reference set]


title: ETMR, sample 1887 [reference set]

value: ETMR


title: ETMR, sample 1886 [reference set]

value: FFPE


title: MB, G3, sample 1908 [reference set]

value: MB, G3


title: GBM, RTK II, sample 1883 [reference set]

value: GBM, RTK II


title: A IDH, HG, sample 1884 [reference set]

value: A IDH, HG


title: MB, SHH INF, sample 1889 [reference set]


title: CHORDM, sample 1879 [reference set]

value: CHORDM


title: EWS, sample 1905 [reference set]


title: LGG, SEGA, sample 1881 [reference set]


title: LGG, DIG/DIA, sample 1880 [reference set]

value: LGG, DIG/DIA


title: ENB, B, sample 1878 [reference set]

value: ENB, B


title: GBM, RTK I, sample 1885 [reference set]

value: GBM, RTK I


title: ENB, B, sample 1874 [reference set]


title: ENB, A, sample 1877 [reference set]

value: ENB, A


title: ENB, A, sample 1875 [reference set]


title: A IDH, sample 1896 [reference set]

value: A IDH


title: ENB, B, sample 1876 [reference set]


title: ENB, B, sample 1872 [reference set]


title: LIPN, sample 1871 [reference set]

value: LIPN


title: LGG, MYB, sample 1868 [reference set]

value: LGG, MYB


title: ENB, B, sample 1873 [reference set]


title: ENB, A, sample 1870 [reference set]


title: ENB, A, sample 1869 [reference set]


title: MB, WNT, sample 1846 [reference set]

value: MB, WNT


title: DMG, K27, sample 1850 [reference set]

value: DMG, K27


title: IHG, sample 1858 [reference set]

value: IHG


title: GBM, RTK II, sample 1861 [reference set]


title: ENB, A, sample 1859 [reference set]


title: MB, G3, sample 1865 [reference set]


title: A IDH, HG, sample 1845 [reference set]


title: A IDH, HG, sample 1847 [reference set]


title: ENB, B, sample 1866 [reference set]


title: GBM, RTK I, sample 1862 [reference set]


title: CONTR, WM, sample 1839 [reference set]

value: CONTR, WM


title: EWS, sample 1867 [reference set]

value: EWS

value: Frozen


title: DMG, K27, sample 1855 [reference set]

value: FFPE


title: CNS NB, FOXR2, sample 1864 [reference set]

value: CNS NB, FOXR2


title: DMG, K27, sample 1844 [reference set]


title: GBM, RTK II, sample 1863 [reference set]

value: GBM, RTK II


title: CHGL, sample 1854 [reference set]

value: CHGL


title: EFT, CIC, sample 1841 [reference set]

value: EFT, CIC


title: MELAN, sample 1840 [reference set]

value: MELAN


title: CNS NB, FOXR2, sample 1842 [reference set]


title: CNS NB, FOXR2, sample 1843 [reference set]


title: GBM, RTK II, sample 1849 [reference set]


title: A IDH, sample 1831 [reference set]


title: O IDH, sample 1835 [reference set]

value: O IDH


title: GBM, RTK I, sample 1832 [reference set]

value: GBM, RTK I


title: MELCYT, sample 1836 [reference set]

value: MELCYT


title: A IDH, sample 1830 [reference set]

value: A IDH


title: DMG, K27, sample 1824 [reference set]


title: DMG, K27, sample 1825 [reference set]


title: DMG, K27, sample 1826 [reference set]


title: GBM, MES, sample 1848 [reference set]

value: GBM, MES


title: PIN T, PPT, sample 1829 [reference set]

value: PIN T, PPT


title: GBM, MID, sample 1819 [reference set]

value: GBM, MID


title: DMG, K27, sample 1823 [reference set]

value: DMG, K27


title: GBM, RTK II, sample 1833 [reference set]


title: GBM, RTK II, sample 1834 [reference set]


title: GBM, RTK III, sample 1814 [reference set]

value: GBM, RTK III


title: DMG, K27, sample 1822 [reference set]


title: O IDH, sample 1827 [reference set]


title: GBM, MYCN, sample 1813 [reference set]

value: GBM, MYCN


title: O IDH, sample 1828 [reference set]


title: DMG, K27, sample 1815 [reference set]


title: GBM, G34, sample 1818 [reference set]

value: GBM, G34


title: DMG, K27, sample 1820 [reference set]

value: FFPE


title: GBM, MYCN, sample 1817 [reference set]


title: CONTR, PINEAL, sample 1838 [reference set]

value: CONTR, PINEAL


title: DMG, K27, sample 1805 [reference set]


title: GBM, RTK III, sample 1821 [reference set]


title: GBM, RTK III, sample 1806 [reference set]


title: DMG, K27, sample 1800 [reference set]


title: A IDH, HG, sample 1797 [reference set]

value: A IDH, HG


title: GBM, G34, sample 1795 [reference set]


title: DMG, K27, sample 1811 [reference set]


title: GBM, RTK II, sample 1792 [reference set]

value: GBM, RTK II

value: Frozen


title: CONTR, INFLAM, sample 1793 [reference set]

value: CONTR, INFLAM


title: DMG, K27, sample 1802 [reference set]


title: GBM, RTK III, sample 1808 [reference set]


title: DMG, K27, sample 1807 [reference set]


title: GBM, G34, sample 1799 [reference set]


title: GBM, RTK II, sample 1788 [reference set]


title: GBM, MID, sample 1801 [reference set]


title: GBM, RTK I, sample 1794 [reference set]


title: GBM, G34, sample 1809 [reference set]


title: GBM, MES, sample 1783 [reference set]


title: DMG, K27, sample 1804 [reference set]


title: GBM, RTK II, sample 1789 [reference set]


title: DMG, K27, sample 1803 [reference set]


title: SFT HMPC, sample 1798 [reference set]

value: SFT HMPC


title: DMG, K27, sample 1810 [reference set]


title: GBM, RTK II, sample 1787 [reference set]


title: CONTR, INFLAM, sample 1790 [reference set]


title: GBM, RTK II, sample 1782 [reference set]


title: CONTR, INFLAM, sample 1786 [reference set]


title: GBM, RTK I, sample 1784 [reference set]

value: GBM, RTK I


title: GBM, RTK I, sample 1779 [reference set]


title: CONTR, INFLAM, sample 1791 [reference set]


title: CONTR, INFLAM, sample 1777 [reference set]


title: CONTR, INFLAM, sample 1785 [reference set]


title: PLEX, AD, sample 1773 [reference set]

value: PLEX, AD


title: PLEX, AD, sample 1769 [reference set]


title: GBM, RTK II, sample 1780 [reference set]


title: LGG, SEGA, sample 1766 [reference set]

value: LGG, SEGA


title: PLEX, AD, sample 1768 [reference set]


title: PLEX, AD, sample 1767 [reference set]


title: GBM, RTK I, sample 1778 [reference set]


title: DMG, K27, sample 1765 [reference set]


title: PLEX, AD, sample 1772 [reference set]


title: IHG, sample 1763 [reference set]

value: IHG


title: DMG, K27, sample 1812 [reference set]


title: PLEX, PED B, sample 1771 [reference set]

value: PLEX, PED B


title: GBM, MYCN, sample 1760 [reference set]


title: GBM, RTK III, sample 1764 [reference set]


title: GBM, G34, sample 1761 [reference set]


title: CONTR, PINEAL, sample 1758 [reference set]


title: DMG, K27, sample 1762 [reference set]


title: GBM, RTK II, sample 1775 [reference set]


title: CONTR, WM, sample 1756 [reference set]

value: CONTR, WM


title: PLEX, AD, sample 1770 [reference set]


title: CONTR, WM, sample 1755 [reference set]


title: GBM, MES, sample 1781 [reference set]

value: GBM, MES


title: ANA PA, sample 1754 [reference set]

value: ANA PA


title: CHORDM, sample 1757 [reference set]

value: CHORDM


title: GBM, RTK II, sample 1749 [reference set]


title: CPH, ADM, sample 1753 [reference set]

value: CPH, ADM


title: MELCYT, sample 1759 [reference set]

value: MELCYT

value: FFPE


title: GBM, RTK II, sample 1750 [reference set]


title: CPH, PAP, sample 1752 [reference set]

value: CPH, PAP


title: GBM, RTK I, sample 1747 [reference set]


title: CONTR, INFLAM, sample 1748 [reference set]


title: CONTR, INFLAM, sample 1746 [reference set]


title: GBM, MES, sample 1751 [reference set]


title: GBM, MES, sample 1745 [reference set]


title: CONTR, INFLAM, sample 1741 [reference set]


title: CONTR, INFLAM, sample 1743 [reference set]


title: CONTR, INFLAM, sample 1742 [reference set]


title: GBM, RTK II, sample 1740 [reference set]

value: GBM, RTK II


title: PIN T,  PB A, sample 1736 [reference set]

value: PIN T,  PB A


title: GBM, RTK II, sample 1739 [reference set]

value: Frozen


title: A IDH, sample 1733 [reference set]

value: A IDH


title: GBM, MES, sample 1729 [reference set]


title: CNS NB, FOXR2, sample 1732 [reference set]

value: CNS NB, FOXR2


title: GBM, RTK I, sample 1727 [reference set]

value: GBM, RTK I


title: LGG, SEGA, sample 1734 [reference set]

value: LGG, SEGA


title: GBM, RTK II, sample 1726 [reference set]


title: CONTR, INFLAM, sample 1725 [reference set]

value: CONTR, INFLAM


title: CONTR, INFLAM, sample 1722 [reference set]


title: GBM, RTK II, sample 1744 [reference set]


title: CONTR, INFLAM, sample 1719 [reference set]


title: GBM, RTK II, sample 1720 [reference set]


title: CONTR, INFLAM, sample 1715 [reference set]


title: GBM, RTK I, sample 1718 [reference set]


title: GBM, RTK II, sample 1721 [reference set]


title: CONTR, INFLAM, sample 1723 [reference set]


title: GBM, MES, sample 1717 [reference set]


title: LGG, PA PF, sample 1714 [reference set]

value: LGG, PA PF


title: GBM, RTK II, sample 1716 [reference set]


title: MB, G4, sample 1735 [reference set]

value: MB, G4


title: CHGL, sample 1711 [reference set]

value: CHGL


title: LIPN, sample 1712 [reference set]

value: LIPN


title: LGG, SEGA, sample 1707 [reference set]


title: O IDH, sample 1709 [reference set]

value: O IDH


title: CONTR, INFLAM, sample 1728 [reference set]


title: LGG, SEGA, sample 1705 [reference set]


title: LGG, SEGA, sample 1704 [reference set]


title: IHG, sample 1703 [reference set]

value: IHG


title: LIPN, sample 1701 [reference set]


title: PIN T,  PB A, sample 1698 [reference set]


title: CONTR, PINEAL, sample 1708 [reference set]

value: CONTR, PINEAL


title: PIN T, PPT, sample 1700 [reference set]

value: PIN T, PPT

value: FFPE


title: CONTR, ADENOPIT, sample 1702 [reference set]

value: CONTR, ADENOPIT


title: GBM, RTK II, sample 1724 [reference set]

value: GBM, RTK II


title: LGG, PA MID, sample 1697 [reference set]

value: LGG, PA MID


title: LGG, RGNT, sample 1699 [reference set]

value: LGG, RGNT


title: EWS, sample 1713 [reference set]

value: EWS


title: GBM, RTK II, sample 1686 [reference set]

value: Frozen


title: PLEX, PED A , sample 1695 [reference set]

value: PLEX, PED A


title: CHORDM, sample 1684 [reference set]

value: CHORDM


title: PIN T, PPT, sample 1694 [reference set]


title: MELCYT, sample 1691 [reference set]

value: MELCYT


title: GBM, MES, sample 1693 [reference set]

value: GBM, MES


title: LGG, PA PF, sample 1696 [reference set]

value: LGG, PA PF


title: SCHW, MEL, sample 1692 [reference set]

value: SCHW, MEL


title: A IDH, sample 1682 [reference set]

value: A IDH


title: LGG, DNT, sample 1678 [reference set]

value: LGG, DNT


title: LGG, SEGA, sample 1706 [reference set]

value: LGG, SEGA


title: SCHW, MEL, sample 1690 [reference set]


title: MELCYT, sample 1688 [reference set]


title: CHORDM, sample 1685 [reference set]


title: MELCYT, sample 1689 [reference set]


title: GBM, RTK II, sample 1675 [reference set]


title: ANA PA, sample 1676 [reference set]

value: ANA PA


title: PIN T,  PB B, sample 1677 [reference set]

value: PIN T,  PB B

value: FFPE


title: LGG, DNT, sample 1672 [reference set]


title: GBM, RTK II, sample 1674 [reference set]

value: GBM, RTK II


title: MB, SHH INF, sample 1667 [reference set]

value: MB, SHH INF


title: ATRT, SHH, sample 1666 [reference set]

value: ATRT, SHH


title: GBM, G34, sample 1665 [reference set]

value: GBM, G34


title: MB, G4, sample 1673 [reference set]

value: MB, G4


title: O IDH, sample 1664 [reference set]

value: O IDH


title: DMG, K27, sample 1681 [reference set]

value: DMG, K27


title: LGG, MYB, sample 1668 [reference set]

value: LGG, MYB


title: LGG, DNT, sample 1663 [reference set]


title: LGG, DNT, sample 1662 [reference set]


title: LGG, DNT, sample 1670 [reference set]


title: DMG, K27, sample 1655 [reference set]


title: DMG, K27, sample 1654 [reference set]


title: PLEX, AD, sample 1660 [reference set]

value: PLEX, AD


title: CONTR, PINEAL, sample 1679 [reference set]

value: CONTR, PINEAL


title: LGG, DNT, sample 1661 [reference set]


title: ENB, A, sample 1658 [reference set]

value: ENB, A


title: ENB, A, sample 1657 [reference set]


title: DMG, K27, sample 1653 [reference set]


title: DMG, K27, sample 1656 [reference set]


title: DMG, K27, sample 1649 [reference set]


title: GBM, RTK III, sample 1646 [reference set]

value: GBM, RTK III


title: GBM, MYCN, sample 1640 [reference set]

value: GBM, MYCN


title: DMG, K27, sample 1641 [reference set]


title: DMG, K27, sample 1644 [reference set]


title: GBM, G34, sample 1636 [reference set]


title: GBM, G34, sample 1635 [reference set]


title: GBM, G34, sample 1638 [reference set]


title: PLEX, PED A , sample 1631 [reference set]

value: PLEX, PED A


title: GBM, MYCN, sample 1634 [reference set]


title: DMG, K27, sample 1648 [reference set]


title: LGG, DNT, sample 1629 [reference set]

value: LGG, DNT


title: GBM, G34, sample 1647 [reference set]


title: DMG, K27, sample 1652 [reference set]


title: DMG, K27, sample 1642 [reference set]


title: DMG, K27, sample 1628 [reference set]


title: DMG, K27, sample 1643 [reference set]


title: GBM, G34, sample 1627 [reference set]


title: A IDH, sample 1626 [reference set]

value: A IDH


title: PITAD, PRL, sample 1625 [reference set]

value: PITAD, PRL

value: FFPE


title: HGNET, BCOR, sample 1637 [reference set]

value: HGNET, BCOR


title: SCHW, sample 1622 [reference set]

value: SCHW


title: SCHW, sample 1621 [reference set]


title: ATRT, TYR, sample 1630 [reference set]

value: ATRT, TYR


title: GBM, MYCN, sample 1633 [reference set]


title: SCHW, sample 1620 [reference set]


title: MNG, sample 1615 [reference set]

value: MNG


title: MNG, sample 1613 [reference set]


title: MNG, sample 1618 [reference set]


title: SCHW, sample 1619 [reference set]


title: MNG, sample 1612 [reference set]


title: PIN T,  PB B, sample 1607 [reference set]

value: PIN T,  PB B


title: LGG, GG, sample 1624 [reference set]

value: LGG, GG


title: MNG, sample 1617 [reference set]


title: PIN T, PPT, sample 1603 [reference set]

value: PIN T, PPT


title: DMG, K27, sample 1604 [reference set]

value: DMG, K27


title: PIN T, PPT, sample 1605 [reference set]


title: CONTR, PINEAL, sample 1598 [reference set]

value: CONTR, PINEAL


title: MNG, sample 1616 [reference set]


title: PIN T,  PB B, sample 1606 [reference set]


title: CONTR, ADENOPIT, sample 1601 [reference set]

value: CONTR, ADENOPIT


title: CONTR, WM, sample 1594 [reference set]

value: CONTR, WM


title: PITUI, sample 1591 [reference set]

value: PITUI


title: PITUI, sample 1589 [reference set]


title: CONTR, ADENOPIT, sample 1600 [reference set]


title: CONTR, WM, sample 1592 [reference set]


title: CONTR, ADENOPIT, sample 1599 [reference set]


title: SCHW, sample 1596 [reference set]


title: MNG, sample 1614 [reference set]


title: MELAN, sample 1580 [reference set]

value: MELAN


title: LGG, DNT, sample 1585 [reference set]

value: LGG, DNT


title: PITUI, sample 1584 [reference set]


title: MELAN, sample 1581 [reference set]


title: MELCYT, sample 1583 [reference set]

value: MELCYT


title: EWS, sample 1577 [reference set]

value: EWS


title: PITAD, PRL, sample 1573 [reference set]

value: PITAD, PRL

value: FFPE


title: PITAD, ACTH, sample 1574 [reference set]

value: PITAD, ACTH


title: PITAD, STH SPA, sample 1572 [reference set]

value: PITAD, STH SPA


title: PITUI, sample 1590 [reference set]


title: PITAD, STH DNS B, sample 1569 [reference set]

value: PITAD, STH DNS B


title: CONTR, WM, sample 1593 [reference set]


title: LGG, PA PF, sample 1586 [reference set]

value: LGG, PA PF


title: PITAD, PRL, sample 1568 [reference set]


title: PITAD, FSH LH, sample 1565 [reference set]

value: PITAD, FSH LH


title: O IDH, sample 1582 [reference set]

value: O IDH

value: Frozen


title: PITAD, FSH LH, sample 1564 [reference set]


title: PITAD, FSH LH, sample 1562 [reference set]


title: PITAD, PRL, sample 1576 [reference set]


title: PITUI, sample 1588 [reference set]


title: PITAD, ACTH, sample 1575 [reference set]


title: PITAD, FSH LH, sample 1554 [reference set]


title: PITAD, STH DNS B, sample 1553 [reference set]


title: PITAD, PRL, sample 1571 [reference set]


title: MB, WNT, sample 1523 [reference set]

value: MB, WNT


title: LGG, PA PF, sample 1524 [reference set]


title: O IDH, sample 1579 [reference set]


title: PITAD, FSH LH, sample 1560 [reference set]


title: PITAD, STH SPA, sample 1570 [reference set]


title: PITAD, STH DNS B, sample 1518 [reference set]


title: PITAD, FSH LH, sample 1566 [reference set]


title: GBM, RTK I, sample 1515 [reference set]

value: GBM, RTK I


title: PITAD, STH DNS A, sample 1517 [reference set]

value: PITAD, STH DNS A


title: PITAD, STH DNS B, sample 1516 [reference set]


title: PITAD, FSH LH, sample 1559 [reference set]


title: PITAD, FSH LH, sample 1563 [reference set]


title: PITAD, FSH LH, sample 1557 [reference set]


title: LGG, DIG/DIA, sample 1514 [reference set]

value: LGG, DIG/DIA


title: PITAD, FSH LH, sample 1561 [reference set]


title: PITAD, ACTH, sample 1567 [reference set]


title: PITAD, STH DNS A, sample 1511 [reference set]


title: CONTR, PINEAL, sample 1512 [reference set]

value: CONTR, PINEAL


title: PITAD, FSH LH, sample 1555 [reference set]


title: PITAD, FSH LH, sample 1556 [reference set]


title: PITAD, STH DNS B, sample 1519 [reference set]


title: LGG, GG, sample 1552 [reference set]

value: LGG, GG


title: PITAD, STH DNS A, sample 1507 [reference set]


title: PITAD, STH SPA, sample 1506 [reference set]


title: ATRT, MYC, sample 1526 [reference set]

value: ATRT, MYC


title: PITAD, STH SPA, sample 1502 [reference set]


title: MB, SHH CHL AD, sample 1525 [reference set]

value: MB, SHH CHL AD


title: PITAD, STH SPA, sample 1500 [reference set]


title: PITAD, STH DNS B, sample 1520 [reference set]


title: GBM, G34, sample 1513 [reference set]

value: GBM, G34


title: PITAD, FSH LH, sample 1558 [reference set]

value: FFPE


title: PITAD, STH SPA, sample 1494 [reference set]


title: PITAD, STH SPA, sample 1493 [reference set]


title: PITAD, STH DNS A, sample 1510 [reference set]


title: PITAD, STH DNS A, sample 1521 [reference set]


title: A IDH, HG, sample 1490 [reference set]

value: A IDH, HG


title: PITAD, STH DNS A, sample 1509 [reference set]


title: GBM, MES, sample 1491 [reference set]

value: GBM, MES


title: PITAD, STH DNS A, sample 1508 [reference set]


title: PITAD, STH SPA, sample 1505 [reference set]

value: PITAD, STH SPA


title: LGG, GG, sample 1487 [reference set]


title: PITAD, STH SPA, sample 1504 [reference set]


title: LGG, GG, sample 1486 [reference set]


title: PITAD, STH SPA, sample 1501 [reference set]


title: LGG, GG, sample 1484 [reference set]


title: LGG, GG, sample 1483 [reference set]


title: LGG, GG, sample 1481 [reference set]


title: PITAD, STH SPA, sample 1499 [reference set]


title: LGG, GG, sample 1479 [reference set]


title: PITAD, STH SPA, sample 1498 [reference set]


title: LGG, GG, sample 1478 [reference set]


title: LGG, GG, sample 1488 [reference set]


title: A IDH, sample 1489 [reference set]

value: A IDH


title: LGG, GG, sample 1471 [reference set]


title: LGG, GG, sample 1485 [reference set]


title: LGG, GG, sample 1470 [reference set]


title: PITAD, STH SPA, sample 1496 [reference set]


title: PITAD, STH SPA, sample 1497 [reference set]


title: PITAD, STH DNS B, sample 1503 [reference set]

value: PITAD, STH DNS B


title: PITAD, FSH LH, sample 1522 [reference set]

value: PITAD, FSH LH


title: PITAD, STH SPA, sample 1495 [reference set]


title: LGG, DNT, sample 1480 [reference set]

value: LGG, DNT


title: LGG, DIG/DIA, sample 1453 [reference set]


title: LGG, SEGA, sample 1450 [reference set]

value: LGG, SEGA


title: PITAD, STH SPA, sample 1492 [reference set]


title: LGG, SEGA, sample 1451 [reference set]


title: LGG, MYB, sample 1476 [reference set]

value: LGG, MYB


title: LGG, DNT, sample 1446 [reference set]


title: MB, G3, sample 1447 [reference set]

value: MB, G3


title: CONTR, ADENOPIT, sample 1443 [reference set]

value: CONTR, ADENOPIT


title: LGG, MYB, sample 1469 [reference set]


title: LGG, DNT, sample 1477 [reference set]


title: LGG, DNT, sample 1468 [reference set]


title: LGG, GG, sample 1474 [reference set]


title: CONTR, ADENOPIT, sample 1442 [reference set]


title: LGG, DNT, sample 1475 [reference set]


title: LGG, GG, sample 1472 [reference set]


title: LGG, DNT, sample 1465 [reference set]


title: LGG, DNT, sample 1454 [reference set]


title: LGG, MYB, sample 1464 [reference set]


title: PGG, nC, sample 1431 [reference set]

value: PGG, nC


title: LGG, SEGA, sample 1452 [reference set]


title: LIPN, sample 1440 [reference set]

value: LIPN


title: CONTR, ADENOPIT, sample 1444 [reference set]


title: MB, G3, sample 1448 [reference set]


title: LGG, SEGA, sample 1449 [reference set]


title: MB, SHH CHL AD, sample 1417 [reference set]

value: Frozen


title: GBM, MES, sample 1434 [reference set]


title: MB, SHH CHL AD, sample 1414 [reference set]

value: MB, SHH CHL AD


title: LGG, PA PF, sample 1411 [reference set]

value: LGG, PA PF


title: MB, SHH INF, sample 1416 [reference set]

value: MB, SHH INF


title: SCHW, MEL, sample 1432 [reference set]

value: SCHW, MEL


title: O IDH, sample 1433 [reference set]

value: O IDH

value: FFPE


title: ENB, B, sample 1429 [reference set]

value: ENB, B


title: ENB, A, sample 1427 [reference set]

value: ENB, A


title: PGG, nC, sample 1420 [reference set]


title: MB, SHH CHL AD, sample 1418 [reference set]


title: CNS NB, FOXR2, sample 1412 [reference set]

value: CNS NB, FOXR2


title: ENB, B, sample 1426 [reference set]


title: PGG, nC, sample 1419 [reference set]


title: MELAN, sample 1401 [reference set]

value: MELAN


title: LGG, DNT, sample 1473 [reference set]

value: LGG, DNT


title: MB, SHH CHL AD, sample 1413 [reference set]


title: ENB, A, sample 1425 [reference set]


title: ENB, B, sample 1409 [reference set]


title: ENB, B, sample 1428 [reference set]


title: LYMPHO, sample 1404 [reference set]

value: LYMPHO


title: SCHW, MEL, sample 1400 [reference set]


title: MELAN, sample 1398 [reference set]


title: SCHW, MEL, sample 1399 [reference set]


title: MELAN, sample 1397 [reference set]


title: MELCYT, sample 1395 [reference set]

value: MELCYT


title: SCHW, MEL, sample 1396 [reference set]


title: MELCYT, sample 1393 [reference set]


title: SCHW, MEL, sample 1410 [reference set]


title: MELCYT, sample 1392 [reference set]


title: MELCYT, sample 1391 [reference set]


title: SCHW, MEL, sample 1390 [reference set]


title: MELCYT, sample 1394 [reference set]


title: MELAN, sample 1389 [reference set]


title: PITAD, PRL, sample 1403 [reference set]

value: PITAD, PRL


title: MELCYT, sample 1386 [reference set]


title: MELAN, sample 1387 [reference set]


title: MELAN, sample 1388 [reference set]


title: O IDH, sample 1384 [reference set]


title: O IDH, sample 1385 [reference set]


title: A IDH, HG, sample 1383 [reference set]

value: A IDH, HG


title: O IDH, sample 1382 [reference set]


title: A IDH, HG, sample 1380 [reference set]


title: O IDH, sample 1377 [reference set]


title: O IDH, sample 1378 [reference set]


title: O IDH, sample 1379 [reference set]


title: O IDH, sample 1376 [reference set]


title: A IDH, HG, sample 1374 [reference set]


title: O IDH, sample 1372 [reference set]


title: O IDH, sample 1370 [reference set]


title: A IDH, HG, sample 1371 [reference set]


title: A IDH, HG, sample 1369 [reference set]


title: A IDH, HG, sample 1366 [reference set]


title: O IDH, sample 1365 [reference set]


title: O IDH, sample 1361 [reference set]


title: O IDH, sample 1367 [reference set]


title: O IDH, sample 1362 [reference set]


title: A IDH, HG, sample 1368 [reference set]


title: O IDH, sample 1364 [reference set]


title: O IDH, sample 1358 [reference set]


title: O IDH, sample 1360 [reference set]


title: O IDH, sample 1381 [reference set]


title: O IDH, sample 1373 [reference set]


title: PLEX, PED B, sample 1350 [reference set]

value: PLEX, PED B


title: A IDH, sample 1357 [reference set]

value: A IDH


title: A IDH, HG, sample 1375 [reference set]


title: A IDH, sample 1353 [reference set]


title: O IDH, sample 1356 [reference set]


title: DMG, K27, sample 1352 [reference set]

value: DMG, K27


title: SFT HMPC, sample 1346 [reference set]

value: SFT HMPC


title: GBM, RTK II, sample 1347 [reference set]

value: GBM, RTK II


title: EWS, sample 1345 [reference set]

value: EWS


title: EWS, sample 1342 [reference set]


title: LGG, DNT, sample 1349 [reference set]


title: O IDH, sample 1363 [reference set]

value: O IDH


title: PITAD, STH DNS B, sample 1348 [reference set]

value: PITAD, STH DNS B

value: FFPE


title: GBM, RTK I, sample 1355 [reference set]

value: GBM, RTK I


title: PLEX, AD, sample 1341 [reference set]

value: PLEX, AD


title: PLEX, PED A , sample 1340 [reference set]

value: PLEX, PED A


title: A IDH, HG, sample 1359 [reference set]


title: PLEX, PED B, sample 1339 [reference set]


title: LIPN, sample 1336 [reference set]

value: LIPN


title: LGG, PA MID, sample 1337 [reference set]

value: LGG, PA MID


title: PLEX, PED B, sample 1338 [reference set]


title: CPH, ADM, sample 1323 [reference set]

value: CPH, ADM


title: CPH, ADM, sample 1321 [reference set]


title: CPH, PAP, sample 1322 [reference set]

value: CPH, PAP


title: CPH, ADM, sample 1324 [reference set]


title: CPH, PAP, sample 1320 [reference set]


title: CPH, ADM, sample 1318 [reference set]


title: CPH, PAP, sample 1319 [reference set]


title: CPH, ADM, sample 1316 [reference set]


title: ATRT, SHH, sample 1314 [reference set]

value: ATRT, SHH


title: CPH, ADM, sample 1317 [reference set]


title: ATRT, TYR, sample 1313 [reference set]

value: ATRT, TYR


title: ATRT, SHH, sample 1311 [reference set]


title: ATRT, MYC, sample 1309 [reference set]

value: ATRT, MYC


title: ATRT, TYR, sample 1310 [reference set]


title: ATRT, TYR, sample 1312 [reference set]


title: ATRT, SHH, sample 1305 [reference set]


title: ATRT, TYR, sample 1307 [reference set]


title: ATRT, SHH, sample 1306 [reference set]


title: ATRT, SHH, sample 1304 [reference set]


title: ATRT, SHH, sample 1308 [reference set]


title: ATRT, MYC, sample 1302 [reference set]


title: ATRT, TYR, sample 1301 [reference set]


title: ATRT, MYC, sample 1300 [reference set]


title: ATRT, TYR, sample 1297 [reference set]


title: ATRT, TYR, sample 1298 [reference set]


title: ATRT, MYC, sample 1296 [reference set]


title: CHGL, sample 1292 [reference set]

value: CHGL


title: PITAD, FSH LH, sample 1289 [reference set]

value: PITAD, FSH LH


title: ATRT, MYC, sample 1295 [reference set]


title: PGG, nC, sample 1288 [reference set]

value: PGG, nC


title: PITAD, FSH LH, sample 1290 [reference set]


title: O IDH, sample 1287 [reference set]


title: PITAD, PRL, sample 1286 [reference set]

value: PITAD, PRL


title: ATRT, MYC, sample 1315 [reference set]


title: GBM, G34, sample 1284 [reference set]

value: GBM, G34


title: PITAD, ACTH, sample 1285 [reference set]

value: PITAD, ACTH


title: ATRT, MYC, sample 1303 [reference set]

value: FFPE


title: GBM, G34, sample 1279 [reference set]


title: A IDH, sample 1281 [reference set]

value: A IDH


title: ATRT, SHH, sample 1299 [reference set]


title: ATRT, TYR, sample 1274 [reference set]

value: Frozen


title: ATRT, MYC, sample 1271 [reference set]


title: GBM, RTK III, sample 1278 [reference set]

value: GBM, RTK III


title: ATRT, SHH, sample 1272 [reference set]


title: ATRT, SHH, sample 1273 [reference set]


title: ATRT, MYC, sample 1275 [reference set]


title: CNS NB, FOXR2, sample 1276 [reference set]

value: CNS NB, FOXR2


title: ATRT, SHH, sample 1270 [reference set]


title: PITAD, ACTH, sample 1267 [reference set]


title: ATRT, MYC, sample 1266 [reference set]


title: SFT HMPC, sample 1265 [reference set]

value: SFT HMPC


title: PITAD, ACTH, sample 1260 [reference set]


title: ETMR, sample 1262 [reference set]

value: ETMR


title: PLEX, AD, sample 1280 [reference set]

value: PLEX, AD


title: A IDH, HG, sample 1264 [reference set]

value: A IDH, HG


title: PITAD, STH DNS B, sample 1261 [reference set]

value: PITAD, STH DNS B


title: ETMR, sample 1259 [reference set]


title: CNS NB, FOXR2, sample 1277 [reference set]


title: A IDH, sample 1254 [reference set]


title: PGG, nC, sample 1257 [reference set]


title: A IDH, sample 1252 [reference set]


title: ATRT, TYR, sample 1245 [reference set]

value: ATRT, TYR


title: O IDH, sample 1255 [reference set]

value: O IDH


title: A IDH, sample 1253 [reference set]


title: MNG, sample 1239 [reference set]

value: MNG


title: MB, WNT, sample 1242 [reference set]

value: MB, WNT


title: MNG, sample 1237 [reference set]


title: LGG, MYB, sample 1248 [reference set]

value: LGG, MYB


title: ATRT, SHH, sample 1247 [reference set]

value: ATRT, SHH


title: LIPN, sample 1268 [reference set]

value: LIPN


title: DMG, K27, sample 1251 [reference set]

value: DMG, K27

value: FFPE


title: ATRT, TYR, sample 1246 [reference set]

value: Frozen


title: MB, SHH INF, sample 1243 [reference set]

value: MB, SHH INF


title: MNG, sample 1236 [reference set]


title: ATRT, TYR, sample 1244 [reference set]


title: MNG, sample 1234 [reference set]


title: MNG, sample 1230 [reference set]


title: MNG, sample 1238 [reference set]


title: MB, SHH CHL AD, sample 1415 [reference set]

value: MB, SHH CHL AD


title: MB, SHH CHL AD, sample 1241 [reference set]


title: MNG, sample 1232 [reference set]


title: MNG, sample 1235 [reference set]


title: LGG, MYB, sample 1258 [reference set]


title: MNG, sample 1224 [reference set]


title: MNG, sample 1222 [reference set]


title: MNG, sample 1231 [reference set]


title: HGNET, BCOR, sample 1215 [reference set]

value: HGNET, BCOR


title: MNG, sample 1233 [reference set]


title: MNG, sample 1226 [reference set]


title: MNG, sample 1229 [reference set]


title: MNG, sample 1228 [reference set]


title: MNG, sample 1223 [reference set]


title: MNG, sample 1227 [reference set]


title: O IDH, sample 1206 [reference set]


title: O IDH, sample 1209 [reference set]


title: MNG, sample 1221 [reference set]


title: ETMR, sample 1217 [reference set]

value: ETMR


title: MNG, sample 1225 [reference set]


title: MB, SHH INF, sample 1213 [reference set]


title: MB, SHH INF, sample 1212 [reference set]


title: ETMR, sample 1216 [reference set]


title: CN, sample 1220 [reference set]

value: CN


title: MB, G4, sample 1192 [reference set]

value: MB, G4


title: GBM, RTK I, sample 1203 [reference set]

value: GBM, RTK I


title: ETMR, sample 1218 [reference set]


title: GBM, MID, sample 1214 [reference set]

value: GBM, MID


title: CNS NB, FOXR2, sample 1207 [reference set]

value: CNS NB, FOXR2


title: SCHW, sample 1208 [reference set]

value: SCHW


title: MB, SHH INF, sample 1211 [reference set]


title: ATRT, SHH, sample 1193 [reference set]


title: CONTR, PINEAL, sample 1205 [reference set]

value: CONTR, PINEAL


title: MELCYT, sample 1181 [reference set]

value: MELCYT


title: LGG, PA MID, sample 1183 [reference set]

value: LGG, PA MID


title: PITUI, sample 1185 [reference set]

value: PITUI


title: LGG, DNT, sample 1180 [reference set]

value: LGG, DNT


title: PLEX, AD, sample 1178 [reference set]

value: PLEX, AD

value: FFPE


title: DLGNT, sample 1184 [reference set]

value: DLGNT


title: LGG, PA MID, sample 1194 [reference set]


title: GBM, RTK II, sample 1189 [reference set]

value: GBM, RTK II


title: SFT HMPC, sample 1177 [reference set]

value: SFT HMPC


title: GBM, RTK III, sample 1172 [reference set]

value: GBM, RTK III


title: GBM, RTK III, sample 1170 [reference set]


title: PITUI, sample 1186 [reference set]


title: GBM, MYCN, sample 1173 [reference set]

value: GBM, MYCN


title: IHG, sample 1176 [reference set]

value: IHG


title: PLEX, AD, sample 1179 [reference set]


title: DMG, K27, sample 1188 [reference set]

value: DMG, K27


title: DMG, K27, sample 1164 [reference set]


title: MB, G4, sample 1169 [reference set]

value: MB, G4


title: PLEX, PED A , sample 1166 [reference set]

value: PLEX, PED A


title: MB, G3, sample 1168 [reference set]

value: MB, G3


title: PIN T, PPT, sample 1160 [reference set]

value: PIN T, PPT


title: PIN T, PPT, sample 1159 [reference set]


title: LGG, PA PF, sample 1147 [reference set]

value: LGG, PA PF


title: PGG, nC, sample 1153 [reference set]

value: PGG, nC


title: SFT HMPC, sample 1163 [reference set]


title: PLEX, AD, sample 1162 [reference set]


title: PITUI, sample 1144 [reference set]

value: PITUI


title: CPH, ADM, sample 1148 [reference set]

value: CPH, ADM


title: PGG, nC, sample 1155 [reference set]


title: LGG, DNT, sample 1146 [reference set]

value: LGG, DNT


title: PGG, nC, sample 1142 [reference set]

value: FFPE


title: PGG, nC, sample 1154 [reference set]


title: PGG, nC, sample 1150 [reference set]


title: MB, SHH CHL AD, sample 1149 [reference set]

value: MB, SHH CHL AD


title: PGG, nC, sample 1139 [reference set]


title: PGG, nC, sample 1141 [reference set]


title: SFT HMPC, sample 1165 [reference set]


title: PGG, nC, sample 1137 [reference set]


title: PGG, nC, sample 1136 [reference set]


title: PGG, nC, sample 1138 [reference set]


title: MB, G4, sample 1116 [reference set]

value: Frozen


title: PIN T,  PB B, sample 1161 [reference set]

value: PIN T,  PB B


title: HMB, sample 1157 [reference set]

value: HMB


title: PGG, nC, sample 1152 [reference set]


title: HMB, sample 1113 [reference set]


title: SCHW, sample 1108 [reference set]

value: SCHW


title: MB, G3, sample 1111 [reference set]


title: SFT HMPC, sample 1156 [reference set]

value: SFT HMPC


title: SFT HMPC, sample 1112 [reference set]


title: SCHW, sample 1109 [reference set]


title: SCHW, sample 1105 [reference set]


title: SCHW, sample 1107 [reference set]


title: PGG, nC, sample 1140 [reference set]


title: SCHW, sample 1103 [reference set]


title: SCHW, sample 1102 [reference set]


title: SCHW, sample 1104 [reference set]


title: HMB, sample 1096 [reference set]


title: O IDH, sample 1099 [reference set]

value: O IDH


title: SFT HMPC, sample 1098 [reference set]


title: SCHW, sample 1101 [reference set]


title: SFT HMPC, sample 1097 [reference set]


title: HMB, sample 1093 [reference set]


title: SCHW, sample 1106 [reference set]


title: HMB, sample 1095 [reference set]


title: HMB, sample 1094 [reference set]


title: HMB, sample 1092 [reference set]


title: MNG, sample 1091 [reference set]

value: MNG


title: ETMR, sample 1088 [reference set]

value: ETMR


title: ETMR, sample 1089 [reference set]


title: HMB, sample 1085 [reference set]


title: SCHW, sample 1084 [reference set]


title: HMB, sample 1086 [reference set]


title: MNG, sample 1090 [reference set]


title: SCHW, sample 1100 [reference set]


title: HMB, sample 1083 [reference set]


title: HMB, sample 1082 [reference set]


title: MB, SHH CHL AD, sample 1066 [reference set]


title: HMB, sample 1058 [reference set]


title: CPH, PAP, sample 1063 [reference set]

value: CPH, PAP


title: MB, SHH CHL AD, sample 1064 [reference set]


title: MB, SHH INF, sample 1065 [reference set]

value: MB, SHH INF


title: HMB, sample 1060 [reference set]


title: HMB, sample 1062 [reference set]


title: CPH, PAP, sample 1050 [reference set]


title: HMB, sample 1059 [reference set]


title: HMB, sample 1054 [reference set]


title: CPH, PAP, sample 1047 [reference set]


title: HMB, sample 1056 [reference set]


title: HMB, sample 1057 [reference set]


title: HMB, sample 1055 [reference set]


title: SCHW, sample 1048 [reference set]


title: CPH, PAP, sample 1046 [reference set]


title: GBM, MYCN, sample 1043 [reference set]

value: GBM, MYCN


title: MB, SHH INF, sample 1038 [reference set]


title: ATRT, TYR, sample 1040 [reference set]

value: ATRT, TYR


title: MB, SHH CHL AD, sample 1039 [reference set]


title: CPH, PAP, sample 996 [reference set]


title: CNS NB, FOXR2, sample 1041 [reference set]

value: CNS NB, FOXR2


title: CNS NB, FOXR2, sample 1042 [reference set]


title: SCHW, sample 999 [reference set]


title: LGG, DNT, sample 989 [reference set]


title: MB, G4, sample 992 [reference set]

value: MB, G4


title: CPH, PAP, sample 995 [reference set]


title: ENB, A, sample 987 [reference set]

value: ENB, A


title: CPH, PAP, sample 993 [reference set]

value: FFPE


title: ENB, B, sample 986 [reference set]

value: ENB, B


title: MB, SHH INF, sample 985 [reference set]

value: Frozen


title: LIPN, sample 991 [reference set]

value: LIPN


title: MB, SHH CHL AD, sample 984 [reference set]

value: MB, SHH CHL AD


title: MNG, sample 981 [reference set]


title: MB, SHH CHL AD, sample 983 [reference set]


title: HMB, sample 1053 [reference set]

value: HMB


title: HMB, sample 1052 [reference set]


title: MB, SHH CHL AD, sample 979 [reference set]


title: HMB, sample 1061 [reference set]


title: HGNET, BCOR, sample 980 [reference set]

value: HGNET, BCOR


title: A IDH, HG, sample 988 [reference set]

value: A IDH, HG


title: MB, SHH CHL AD, sample 976 [reference set]


title: MB, SHH CHL AD, sample 977 [reference set]


title: MNG, sample 982 [reference set]

value: MNG


title: A IDH, HG, sample 974 [reference set]


title: PITUI, sample 998 [reference set]

value: PITUI


title: DMG, K27, sample 973 [reference set]

value: DMG, K27


title: CPH, PAP, sample 934 [reference set]

value: CPH, PAP


title: CPH, ADM, sample 937 [reference set]

value: CPH, ADM


title: CPH, ADM, sample 936 [reference set]


title: CPH, ADM, sample 933 [reference set]


title: LGG, GG, sample 962 [reference set]

value: LGG, GG


title: PLEX, AD, sample 926 [reference set]

value: PLEX, AD


title: MNG, sample 971 [reference set]


title: CPH, ADM, sample 931 [reference set]


title: LGG, DNT, sample 924 [reference set]

value: LGG, DNT


title: CPH, ADM, sample 932 [reference set]


title: CHGL, sample 923 [reference set]

value: CHGL


title: CN, sample 922 [reference set]

value: CN

value: FFPE


title: MB, SHH CHL AD, sample 978 [reference set]

value: Frozen


title: CN, sample 921 [reference set]


title: MELAN, sample 925 [reference set]

value: MELAN


title: CN, sample 915 [reference set]


title: CN, sample 919 [reference set]


title: CN, sample 917 [reference set]


title: CN, sample 920 [reference set]


title: CN, sample 916 [reference set]


title: DMG, K27, sample 910 [reference set]


title: CPH, ADM, sample 914 [reference set]


title: CNS NB, FOXR2, sample 911 [reference set]

value: CNS NB, FOXR2


title: CPH, ADM, sample 913 [reference set]


title: CN, sample 918 [reference set]


title: A IDH, sample 906 [reference set]

value: A IDH


title: HGNET, BCOR, sample 901 [reference set]

value: HGNET, BCOR


title: DMG, K27, sample 909 [reference set]


title: DMG, K27, sample 908 [reference set]


title: CPH, PAP, sample 935 [reference set]


title: A IDH, HG, sample 897 [reference set]

value: A IDH, HG


title: DMG, K27, sample 896 [reference set]


title: LGG, DNT, sample 907 [reference set]


title: PIN T, PPT, sample 893 [reference set]

value: PIN T, PPT


title: CNS NB, FOXR2, sample 912 [reference set]


title: LGG, DNT, sample 904 [reference set]


title: LGG, RGNT, sample 905 [reference set]

value: LGG, RGNT


title: GBM, G34, sample 887 [reference set]

value: GBM, G34


title: PGG, nC, sample 886 [reference set]

value: PGG, nC


title: A IDH, HG, sample 882 [reference set]


title: A IDH, HG, sample 883 [reference set]


title: LGG, DNT, sample 903 [reference set]


title: LGG, DNT, sample 902 [reference set]


title: PGG, nC, sample 880 [reference set]


title: HGNET, BCOR, sample 898 [reference set]


title: LGG, DNT, sample 900 [reference set]


title: CONTR, PINEAL, sample 878 [reference set]

value: CONTR, PINEAL


title: HGNET, BCOR, sample 899 [reference set]


title: GBM, G34, sample 895 [reference set]


title: PIN T, PPT, sample 891 [reference set]


title: PIN T, PPT, sample 889 [reference set]


title: CONTR, PINEAL, sample 892 [reference set]


title: A IDH, sample 888 [reference set]


title: GBM, RTK II, sample 871 [reference set]

value: GBM, RTK II


title: GBM, MES, sample 885 [reference set]

value: GBM, MES


title: A IDH, sample 873 [reference set]


title: O IDH, sample 872 [reference set]

value: O IDH


title: ENB, A, sample 870 [reference set]

value: ENB, A


title: ETMR, sample 865 [reference set]

value: ETMR


title: A IDH, sample 881 [reference set]

value: FFPE


title: ATRT, MYC, sample 866 [reference set]

value: ATRT, MYC


title: A IDH, sample 877 [reference set]


title: A IDH, sample 875 [reference set]


title: GBM, RTK II, sample 876 [reference set]


title: PITUI, sample 874 [reference set]

value: PITUI


title: LGG, SEGA, sample 869 [reference set]

value: LGG, SEGA


title: EFT, CIC, sample 868 [reference set]

value: EFT, CIC


title: CPH, ADM, sample 859 [reference set]

value: CPH, ADM


title: CNS NB, FOXR2, sample 867 [reference set]

value: CNS NB, FOXR2


title: CPH, PAP, sample 861 [reference set]

value: CPH, PAP


title: CPH, ADM, sample 860 [reference set]


title: CPH, PAP, sample 862 [reference set]


title: EFT, CIC, sample 848 [reference set]

value: Frozen


title: CPH, ADM, sample 863 [reference set]


title: GBM, RTK I, sample 840 [reference set]

value: GBM, RTK I


title: MB, SHH INF, sample 845 [reference set]

value: MB, SHH INF


title: ETMR, sample 842 [reference set]


title: GBM, RTK I, sample 837 [reference set]


title: PIN T, PPT, sample 857 [reference set]

value: PIN T, PPT


title: LYMPHO, sample 852 [reference set]

value: LYMPHO


title: ETMR, sample 846 [reference set]


title: MB, SHH INF, sample 847 [reference set]


title: EFT, CIC, sample 833 [reference set]


title: GBM, RTK II, sample 844 [reference set]

value: GBM, RTK II


title: MB, SHH INF, sample 839 [reference set]


title: GBM, RTK II, sample 838 [reference set]


title: GBM, RTK II, sample 829 [reference set]


title: GBM, RTK II, sample 836 [reference set]


title: GBM, RTK I, sample 835 [reference set]


title: GBM, RTK II, sample 824 [reference set]


title: GBM, RTK II, sample 823 [reference set]


title: GBM, MES, sample 822 [reference set]

value: GBM, MES


title: GBM, RTK II, sample 821 [reference set]


title: PIN T, PPT, sample 858 [reference set]


title: GBM, RTK II, sample 820 [reference set]


title: EFT, CIC, sample 834 [reference set]


title: GBM, RTK II, sample 818 [reference set]


title: GBM, RTK II, sample 832 [reference set]


title: LYMPHO, sample 853 [reference set]


title: GBM, RTK II, sample 817 [reference set]


title: GBM, MES, sample 831 [reference set]


title: GBM, MES, sample 815 [reference set]


title: GBM, RTK II, sample 830 [reference set]


title: CONTR, INFLAM, sample 828 [reference set]

value: CONTR, INFLAM


title: HGNET, BCOR, sample 849 [reference set]

value: HGNET, BCOR


title: ETMR, sample 813 [reference set]

value: ETMR

value: FFPE


title: ETMR, sample 809 [reference set]


title: GBM, RTK II, sample 827 [reference set]


title: GBM, RTK II, sample 826 [reference set]


title: GBM, RTK II, sample 825 [reference set]


title: GBM, RTK II, sample 797 [reference set]


title: GBM, RTK I, sample 843 [reference set]


title: GBM, RTK II, sample 819 [reference set]


title: GBM, RTK II, sample 816 [reference set]


title: ETMR, sample 814 [reference set]


title: ETMR, sample 810 [reference set]


title: CN, sample 782 [reference set]

value: CN


title: ETMR, sample 808 [reference set]


title: ETMR, sample 812 [reference set]


title: LYMPHO, sample 807 [reference set]


title: ANA PA, sample 806 [reference set]

value: ANA PA


title: GBM, RTK I, sample 796 [reference set]


title: GBM, MES, sample 795 [reference set]


title: PIN T,  PB B, sample 793 [reference set]

value: PIN T,  PB B


title: LGG, SEGA, sample 790 [reference set]

value: LGG, SEGA


title: O IDH, sample 764 [reference set]

value: O IDH


title: LGG, SEGA, sample 789 [reference set]


title: LGG, PA PF, sample 758 [reference set]

value: LGG, PA PF


title: CN, sample 784 [reference set]


title: CN, sample 781 [reference set]


title: CN, sample 783 [reference set]


title: A IDH, sample 755 [reference set]

value: A IDH


title: GBM, RTK II, sample 751 [reference set]

value: Frozen


title: MB, SHH CHL AD, sample 769 [reference set]

value: MB, SHH CHL AD


title: CN, sample 780 [reference set]


title: CN, sample 779 [reference set]


title: LGG, SEGA, sample 777 [reference set]


title: LGG, SEGA, sample 778 [reference set]


title: CN, sample 776 [reference set]


title: MNG, sample 743 [reference set]

value: MNG


title: LGG, GG, sample 773 [reference set]

value: LGG, GG


title: MB, SHH CHL AD, sample 770 [reference set]


title: CN, sample 774 [reference set]


title: MB, G4, sample 750 [reference set]

value: MB, G4


title: ATRT, SHH, sample 766 [reference set]

value: ATRT, SHH


title: MNG, sample 740 [reference set]


title: MB, SHH CHL AD, sample 765 [reference set]


title: A IDH, HG, sample 737 [reference set]

value: A IDH, HG


title: A IDH, sample 738 [reference set]


title: A IDH, sample 734 [reference set]


title: A IDH, sample 735 [reference set]


title: O IDH, sample 763 [reference set]


title: A IDH, sample 733 [reference set]


title: A IDH, sample 756 [reference set]


title: A IDH, HG, sample 754 [reference set]


title: EFT, CIC, sample 753 [reference set]

value: EFT, CIC


title: CNS NB, FOXR2, sample 768 [reference set]

value: CNS NB, FOXR2


title: LGG, MYB, sample 729 [reference set]

value: LGG, MYB

value: FFPE


title: LGG, PA MID, sample 730 [reference set]

value: LGG, PA MID


title: ETMR, sample 767 [reference set]

value: ETMR


title: LGG, MYB, sample 728 [reference set]


title: LGG, MYB, sample 727 [reference set]


title: LGG, MYB, sample 724 [reference set]


title: MB, SHH CHL AD, sample 749 [reference set]


title: GBM, RTK I, sample 744 [reference set]

value: GBM, RTK I


title: GBM, RTK II, sample 745 [reference set]

value: GBM, RTK II


title: LGG, MYB, sample 726 [reference set]


title: LGG, MYB, sample 725 [reference set]


title: MNG, sample 742 [reference set]


title: LGG, MYB, sample 723 [reference set]


title: MNG, sample 741 [reference set]


title: MNG, sample 714 [reference set]


title: A IDH, sample 736 [reference set]


title: MNG, sample 710 [reference set]


title: MNG, sample 709 [reference set]


title: MNG, sample 708 [reference set]


title: MNG, sample 739 [reference set]


title: MNG, sample 705 [reference set]


title: MNG, sample 712 [reference set]


title: MB, SHH CHL AD, sample 731 [reference set]


title: MNG, sample 704 [reference set]


title: LGG, MYB, sample 722 [reference set]


title: LGG, MYB, sample 720 [reference set]


title: MNG, sample 697 [reference set]


title: MNG, sample 698 [reference set]


title: MNG, sample 696 [reference set]


title: O IDH, sample 719 [reference set]

value: O IDH


title: MNG, sample 695 [reference set]


title: O IDH, sample 718 [reference set]


title: MNG, sample 692 [reference set]


title: O IDH, sample 717 [reference set]


title: LGG, PA MID, sample 715 [reference set]


title: MNG, sample 687 [reference set]


title: MNG, sample 713 [reference set]


title: MNG, sample 686 [reference set]


title: MNG, sample 685 [reference set]


title: MNG, sample 707 [reference set]


title: O IDH, sample 721 [reference set]


title: MNG, sample 706 [reference set]


title: MNG, sample 703 [reference set]


title: MNG, sample 702 [reference set]


title: MNG, sample 701 [reference set]


title: MNG, sample 700 [reference set]


title: A IDH, HG, sample 716 [reference set]


title: MNG, sample 699 [reference set]


title: ETMR, sample 675 [reference set]


title: CNS NB, FOXR2, sample 672 [reference set]


title: MNG, sample 693 [reference set]


title: MNG, sample 694 [reference set]


title: MB, G4, sample 671 [reference set]


title: MNG, sample 691 [reference set]


title: MNG, sample 690 [reference set]


title: MNG, sample 688 [reference set]


title: MNG, sample 689 [reference set]


title: MNG, sample 683 [reference set]


title: DMG, K27, sample 676 [reference set]

value: DMG, K27


title: CNS NB, FOXR2, sample 674 [reference set]


title: A IDH, HG, sample 663 [reference set]


title: SCHW, sample 655 [reference set]

value: SCHW


title: LGG, PA PF, sample 657 [reference set]

value: LGG, PA PF


title: MB, SHH INF, sample 670 [reference set]

value: MB, SHH INF


title: CNS NB, FOXR2, sample 673 [reference set]


title: SCHW, sample 651 [reference set]


title: ETMR, sample 669 [reference set]


title: MNG, sample 684 [reference set]

value: MNG

value: Frozen


title: ETMR, sample 667 [reference set]


title: ETMR, sample 668 [reference set]


title: CNS NB, FOXR2, sample 665 [reference set]


title: HGNET, BCOR, sample 647 [reference set]

value: HGNET, BCOR


title: ETMR, sample 664 [reference set]


title: ATRT, SHH, sample 643 [reference set]

value: ATRT, SHH


title: CNS NB, FOXR2, sample 648 [reference set]


title: ETMR, sample 645 [reference set]


title: CNS NB, FOXR2, sample 662 [reference set]


title: MB, SHH CHL AD, sample 642 [reference set]

value: MB, SHH CHL AD


title: CNS NB, FOXR2, sample 646 [reference set]

value: CNS NB, FOXR2


title: SCHW, sample 652 [reference set]


title: LGG, PA PF, sample 638 [reference set]


title: O IDH, sample 654 [reference set]


title: HMB, sample 649 [reference set]

value: HMB


title: LGG, PA PF, sample 640 [reference set]


title: LGG, PA MID, sample 641 [reference set]


title: GBM, RTK II, sample 633 [reference set]


title: LGG, PA PF, sample 639 [reference set]


title: DMG, K27, sample 637 [reference set]


title: GBM, MID, sample 636 [reference set]

value: GBM, MID


title: GBM, RTK II, sample 635 [reference set]


title: LGG, SEGA, sample 653 [reference set]

value: LGG, SEGA

value: FFPE


title: GBM, RTK II, sample 626 [reference set]


title: GBM, RTK I, sample 620 [reference set]

value: GBM, RTK I


title: GBM, RTK II, sample 621 [reference set]

value: GBM, RTK II


title: GBM, RTK I, sample 634 [reference set]


title: MB, G3, sample 617 [reference set]

value: MB, G3


title: GBM, RTK II, sample 632 [reference set]


title: MB, G3, sample 615 [reference set]


title: GBM, RTK I, sample 625 [reference set]


title: GBM, RTK I, sample 627 [reference set]


title: GBM, RTK II, sample 631 [reference set]


title: GBM, RTK I, sample 630 [reference set]


title: GBM, RTK II, sample 629 [reference set]


title: GBM, RTK I, sample 622 [reference set]


title: ETMR, sample 614 [reference set]

value: ETMR


title: GBM, RTK II, sample 624 [reference set]


title: GBM, RTK II, sample 619 [reference set]


title: EFT, CIC, sample 609 [reference set]

value: EFT, CIC


title: ATRT, MYC, sample 610 [reference set]

value: ATRT, MYC


title: ETMR, sample 811 [reference set]


title: MB, SHH CHL AD, sample 611 [reference set]


title: MB, G4, sample 616 [reference set]

value: MB, G4


title: GBM, RTK II, sample 618 [reference set]


title: GBM, RTK II, sample 623 [reference set]


title: GBM, RTK II, sample 628 [reference set]


title: LGG, PA PF, sample 608 [reference set]

value: LGG, PA PF


title: LGG, PA PF, sample 604 [reference set]

value: Frozen


title: LGG, PA PF, sample 606 [reference set]


title: LGG, PA PF, sample 605 [reference set]


title: LGG, PA MID, sample 600 [reference set]

value: LGG, PA MID


title: LGG, PA PF, sample 603 [reference set]


title: LGG, PA MID, sample 607 [reference set]


title: MB, SHH CHL AD, sample 613 [reference set]


title: MB, G4, sample 612 [reference set]


title: LGG, PA MID, sample 598 [reference set]


title: LGG, PA PF, sample 597 [reference set]


title: LGG, PA PF, sample 601 [reference set]


title: LGG, PA PF, sample 599 [reference set]


title: LGG, PA PF, sample 589 [reference set]


title: LGG, PA PF, sample 594 [reference set]


title: LGG, PA PF, sample 596 [reference set]


title: LGG, PA MID, sample 595 [reference set]


title: LGG, PA PF, sample 593 [reference set]


title: LGG, PA PF, sample 592 [reference set]


title: LGG, PA PF, sample 591 [reference set]


title: MB, G4, sample 588 [reference set]


title: MB, SHH INF, sample 587 [reference set]

value: MB, SHH INF


title: MB, SHH CHL AD, sample 584 [reference set]

value: MB, SHH CHL AD


title: MB, G3, sample 586 [reference set]


title: MB, G4, sample 582 [reference set]


title: MB, WNT, sample 579 [reference set]

value: MB, WNT


title: MB, G3, sample 577 [reference set]


title: MB, G3, sample 583 [reference set]


title: MB, SHH CHL AD, sample 576 [reference set]


title: LGG, PA PF, sample 590 [reference set]


title: MB, SHH INF, sample 581 [reference set]


title: MB, G4, sample 578 [reference set]


title: MB, G3, sample 580 [reference set]


title: MB, SHH CHL AD, sample 574 [reference set]


title: MB, SHH CHL AD, sample 573 [reference set]


title: LGG, PA MID, sample 568 [reference set]


title: GBM, G34, sample 572 [reference set]

value: GBM, G34


title: MB, SHH CHL AD, sample 575 [reference set]


title: MB, G4, sample 564 [reference set]


title: MB, SHH CHL AD, sample 562 [reference set]


title: MB, SHH CHL AD, sample 561 [reference set]


title: MB, G4, sample 585 [reference set]


title: MB, SHH CHL AD, sample 565 [reference set]


title: LGG, PA MID, sample 569 [reference set]


title: MB, SHH CHL AD, sample 563 [reference set]


title: ETMR, sample 571 [reference set]


title: MB, G4, sample 560 [reference set]


title: MB, SHH CHL AD, sample 567 [reference set]


title: MB, SHH CHL AD, sample 557 [reference set]


title: MB, G3, sample 558 [reference set]


title: MNG, sample 711 [reference set]

value: MNG


title: MB, SHH CHL AD, sample 556 [reference set]


title: MB, G4, sample 551 [reference set]


title: MB, G4, sample 559 [reference set]


title: MB, G3, sample 548 [reference set]


title: MB, G4, sample 549 [reference set]


title: MB, SHH CHL AD, sample 553 [reference set]


title: MB, G3, sample 546 [reference set]


title: LGG, PA MID, sample 570 [reference set]


title: MB, G4, sample 552 [reference set]


title: MB, G4, sample 547 [reference set]


title: MB, G4, sample 550 [reference set]


title: MB, G4, sample 543 [reference set]


title: MB, SHH CHL AD, sample 566 [reference set]


title: MB, G4, sample 535 [reference set]


title: MB, G3, sample 540 [reference set]


title: MB, SHH CHL AD, sample 541 [reference set]


title: MB, G4, sample 537 [reference set]


title: MB, G3, sample 542 [reference set]


title: MB, G3, sample 538 [reference set]


title: MB, G3, sample 555 [reference set]


title: MB, SHH CHL AD, sample 539 [reference set]


title: MB, G4, sample 534 [reference set]


title: MB, G4, sample 531 [reference set]


title: MB, G4, sample 533 [reference set]


title: MB, G3, sample 529 [reference set]


title: MB, G4, sample 544 [reference set]


title: MB, SHH CHL AD, sample 554 [reference set]


title: MB, G3, sample 532 [reference set]


title: MB, SHH INF, sample 536 [reference set]


title: MB, SHH INF, sample 530 [reference set]


title: MB, G3, sample 545 [reference set]


title: MB, G4, sample 527 [reference set]


title: MB, G4, sample 526 [reference set]


title: MB, G4, sample 524 [reference set]


title: MB, SHH CHL AD, sample 522 [reference set]


title: MB, G3, sample 525 [reference set]


title: MB, G4, sample 523 [reference set]


title: MB, SHH INF, sample 528 [reference set]


title: MB, WNT, sample 521 [reference set]


title: MB, G4, sample 518 [reference set]


title: MB, G3, sample 517 [reference set]


title: MB, G4, sample 519 [reference set]


title: MB, G3, sample 520 [reference set]


title: MB, G3, sample 514 [reference set]


title: MB, G3, sample 515 [reference set]


title: MB, G4, sample 516 [reference set]


title: MB, WNT, sample 512 [reference set]


title: MB, SHH INF, sample 509 [reference set]


title: MB, G3, sample 510 [reference set]


title: MB, G4, sample 511 [reference set]


title: MB, G4, sample 508 [reference set]


title: MB, SHH CHL AD, sample 505 [reference set]


title: MB, G4, sample 506 [reference set]


title: MB, WNT, sample 504 [reference set]


title: MB, SHH CHL AD, sample 503 [reference set]


title: MB, G4, sample 502 [reference set]


title: MB, G4, sample 500 [reference set]


title: MB, SHH INF, sample 501 [reference set]


title: MB, WNT, sample 498 [reference set]


title: MB, G4, sample 497 [reference set]


title: MB, G4, sample 493 [reference set]


title: MB, G4, sample 495 [reference set]


title: MB, G4, sample 494 [reference set]


title: MB, SHH CHL AD, sample 492 [reference set]


title: MB, WNT, sample 496 [reference set]


title: MB, G3, sample 491 [reference set]


title: MB, G4, sample 513 [reference set]


title: MB, G4, sample 490 [reference set]


title: MB, G4, sample 487 [reference set]


title: MB, G3, sample 485 [reference set]


title: MB, WNT, sample 483 [reference set]


title: MB, SHH INF, sample 484 [reference set]


title: MB, G4, sample 507 [reference set]


title: MB, SHH INF, sample 489 [reference set]


title: MB, SHH INF, sample 488 [reference set]


title: MB, WNT, sample 482 [reference set]


title: MB, SHH CHL AD, sample 486 [reference set]


title: MB, SHH CHL AD, sample 478 [reference set]


title: MB, G3, sample 499 [reference set]


title: MB, G3, sample 481 [reference set]


title: MB, G4, sample 474 [reference set]


title: MB, SHH INF, sample 473 [reference set]


title: MB, SHH INF, sample 475 [reference set]


title: MB, G3, sample 477 [reference set]


title: MB, G3, sample 480 [reference set]


title: MB, G3, sample 463 [reference set]


title: MB, SHH INF, sample 465 [reference set]


title: MB, WNT, sample 466 [reference set]


title: MB, G3, sample 462 [reference set]


title: MB, G4, sample 476 [reference set]


title: MB, G4, sample 456 [reference set]


title: MB, SHH CHL AD, sample 453 [reference set]


title: MB, SHH INF, sample 468 [reference set]


title: MB, WNT, sample 469 [reference set]


title: MB, WNT, sample 459 [reference set]


title: MB, G4, sample 479 [reference set]


title: MB, G4, sample 472 [reference set]


title: MB, G4, sample 457 [reference set]


title: MB, G4, sample 467 [reference set]


title: MB, G4, sample 448 [reference set]


title: MB, G3, sample 446 [reference set]


title: MB, G4, sample 455 [reference set]


title: MB, G4, sample 450 [reference set]


title: MB, G3, sample 464 [reference set]


title: MB, SHH CHL AD, sample 443 [reference set]


title: MB, G4, sample 460 [reference set]


title: MB, SHH INF, sample 461 [reference set]


title: MB, G3, sample 442 [reference set]


title: MB, SHH CHL AD, sample 441 [reference set]


title: MB, SHH INF, sample 440 [reference set]


title: MB, SHH CHL AD, sample 454 [reference set]


title: MB, G4, sample 452 [reference set]


title: MB, G4, sample 458 [reference set]


title: MB, G4, sample 436 [reference set]


title: MB, G4, sample 437 [reference set]


title: MB, SHH INF, sample 435 [reference set]


title: ETMR, sample 471 [reference set]


title: MB, G3, sample 449 [reference set]


title: MB, G4, sample 428 [reference set]


title: MB, G3, sample 429 [reference set]


title: MB, WNT, sample 430 [reference set]


title: MB, G3, sample 451 [reference set]


title: MB, WNT, sample 447 [reference set]


title: MB, G4, sample 426 [reference set]


title: MB, SHH INF, sample 425 [reference set]


title: MB, G3, sample 422 [reference set]


title: MB, G4, sample 424 [reference set]


title: MB, G4, sample 419 [reference set]


title: MB, G3, sample 417 [reference set]


title: MB, G4, sample 416 [reference set]


title: MB, G4, sample 439 [reference set]


title: MB, G3, sample 414 [reference set]


title: MB, G4, sample 444 [reference set]


title: MB, G4, sample 438 [reference set]


title: MB, G4, sample 412 [reference set]


title: MB, G4, sample 409 [reference set]


title: MB, G4, sample 432 [reference set]


title: MB, G4, sample 433 [reference set]


title: MB, G4, sample 407 [reference set]


title: MB, G3, sample 434 [reference set]


title: MB, SHH INF, sample 405 [reference set]


title: MB, G4, sample 431 [reference set]


title: MB, G3, sample 445 [reference set]


title: MB, G4, sample 427 [reference set]


title: MB, G4, sample 420 [reference set]


title: MB, G4, sample 423 [reference set]


title: MB, G4, sample 421 [reference set]


title: MB, SHH INF, sample 418 [reference set]


title: MB, G4, sample 399 [reference set]


title: MB, SHH INF, sample 398 [reference set]


title: MB, G4, sample 397 [reference set]


title: MB, G4, sample 415 [reference set]


title: MB, G3, sample 411 [reference set]


title: MB, G4, sample 393 [reference set]


title: MB, G3, sample 413 [reference set]


title: MB, SHH CHL AD, sample 406 [reference set]


title: MB, G4, sample 394 [reference set]


title: MB, SHH CHL AD, sample 395 [reference set]


title: MB, WNT, sample 391 [reference set]


title: MB, G3, sample 410 [reference set]


title: MB, G4, sample 401 [reference set]


title: MB, G4, sample 389 [reference set]


title: MB, SHH INF, sample 408 [reference set]


title: MB, SHH INF, sample 404 [reference set]


title: MB, SHH INF, sample 388 [reference set]


title: CONTR, CEBM, sample 380 [reference set]

value: CONTR, CEBM


title: MB, G3, sample 390 [reference set]

value: FFPE


title: CONTR, CEBM, sample 381 [reference set]


title: MB, SHH INF, sample 402 [reference set]


title: LGG, PA PF, sample 371 [reference set]


title: MB, G4, sample 392 [reference set]


title: LGG, PA PF, sample 369 [reference set]


title: LGG, PA PF, sample 367 [reference set]


title: MB, G4, sample 400 [reference set]


title: GBM, G34, sample 337 [reference set]


title: LGG, PA PF, sample 327 [reference set]


title: MB, WNT, sample 403 [reference set]


title: LGG, PA MID, sample 372 [reference set]


title: MB, G3, sample 396 [reference set]


title: LGG, PA PF, sample 325 [reference set]


title: LGG, PA PF, sample 321 [reference set]


title: LGG, PA PF, sample 320 [reference set]


title: LGG, PA PF, sample 323 [reference set]


title: LGG, PA PF, sample 318 [reference set]


title: LGG, PA PF, sample 319 [reference set]


title: LGG, PA PF, sample 316 [reference set]


title: LGG, PA PF, sample 368 [reference set]


title: LGG, PA PF, sample 315 [reference set]


title: LGG, PA PF, sample 313 [reference set]


title: LGG, PA PF, sample 364 [reference set]


title: LGG, PA PF, sample 365 [reference set]


title: LGG, PA MID, sample 312 [reference set]


title: LGG, PA PF, sample 328 [reference set]


title: LGG, PA PF, sample 314 [reference set]


title: LGG, PA PF, sample 309 [reference set]


title: HGNET, BCOR, sample 336 [reference set]

value: HGNET, BCOR


title: LGG, PA PF, sample 322 [reference set]


title: LGG, MYB, sample 356 [reference set]

value: LGG, MYB


title: LGG, PA PF, sample 326 [reference set]


title: LGG, PA PF, sample 324 [reference set]


title: LGG, PA PF, sample 301 [reference set]


title: LGG, PA PF, sample 308 [reference set]


title: LGG, PA PF, sample 310 [reference set]


title: LGG, PA PF, sample 311 [reference set]


title: LGG, PA MID, sample 317 [reference set]


title: LGG, PA MID, sample 298 [reference set]


title: LGG, PA PF, sample 297 [reference set]


title: LGG, PA PF, sample 296 [reference set]


title: LGG, PA PF, sample 306 [reference set]


title: LGG, PA PF, sample 289 [reference set]


title: LGG, PA PF, sample 288 [reference set]


title: MB, G4, sample 293 [reference set]


title: MB, G4, sample 291 [reference set]


title: LGG, PA PF, sample 307 [reference set]


title: LGG, PA PF, sample 300 [reference set]


title: LGG, PA PF, sample 305 [reference set]


title: LGG, PA PF, sample 303 [reference set]


title: MB, G4, sample 292 [reference set]


title: LGG, PA PF, sample 299 [reference set]


title: LGG, PA MID, sample 366 [reference set]


title: LGG, PA PF, sample 304 [reference set]


title: MB, G4, sample 284 [reference set]


title: MB, G4, sample 285 [reference set]


title: MB, WNT, sample 294 [reference set]


title: MB, WNT, sample 295 [reference set]


title: MB, WNT, sample 290 [reference set]


title: MB, WNT, sample 283 [reference set]


title: LGG, PA PF, sample 286 [reference set]


title: LGG, PA MID, sample 302 [reference set]


title: MB, G4, sample 281 [reference set]


title: MB, G4, sample 280 [reference set]


title: MB, SHH CHL AD, sample 277 [reference set]


title: MB, WNT, sample 282 [reference set]


title: MB, WNT, sample 279 [reference set]


title: MB, G3, sample 278 [reference set]

value: MB, G3


title: GBM, RTK II, sample 272 [reference set]

value: GBM, RTK II


title: LGG, PA PF, sample 287 [reference set]


title: GBM, G34, sample 260 [reference set]


title: GBM, RTK II, sample 270 [reference set]


title: GBM, RTK II, sample 268 [reference set]


title: GBM, G34, sample 261 [reference set]


title: DMG, K27, sample 259 [reference set]

value: DMG, K27


title: DMG, K27, sample 262 [reference set]


title: GBM, RTK II, sample 258 [reference set]


title: DMG, K27, sample 266 [reference set]


title: GBM, G34, sample 265 [reference set]


title: DMG, K27, sample 264 [reference set]


title: GBM, RTK I, sample 271 [reference set]

value: GBM, RTK I


title: GBM, G34, sample 263 [reference set]


title: GBM, RTK II, sample 256 [reference set]


title: GBM, RTK I, sample 257 [reference set]


title: GBM, RTK II, sample 269 [reference set]


title: GBM, RTK II, sample 251 [reference set]


title: GBM, RTK II, sample 254 [reference set]


title: GBM, RTK II, sample 255 [reference set]


title: GBM, MES, sample 253 [reference set]

value: GBM, MES


title: MB, SHH CHL AD, sample 276 [reference set]


title: GBM, MES, sample 252 [reference set]


title: GBM, RTK II, sample 267 [reference set]


title: GBM, RTK II, sample 247 [reference set]


title: GBM, RTK II, sample 250 [reference set]


title: GBM, MES, sample 246 [reference set]


title: GBM, RTK II, sample 245 [reference set]


title: GBM, RTK II, sample 244 [reference set]


title: GBM, RTK II, sample 248 [reference set]


title: GBM, RTK II, sample 249 [reference set]


title: GBM, MES, sample 243 [reference set]


title: LGG, PA MID, sample 232 [reference set]


title: GBM, RTK II, sample 236 [reference set]


title: GBM, RTK I, sample 237 [reference set]


title: LGG, PA PF, sample 231 [reference set]

value: LGG, PA PF


title: GBM, RTK II, sample 235 [reference set]

value: Frozen


title: GBM, MES, sample 241 [reference set]


title: MB, SHH CHL AD, sample 224 [reference set]


title: GBM, MES, sample 238 [reference set]


title: MB, G3, sample 230 [reference set]


title: LGG, PA PF, sample 233 [reference set]


title: MB, SHH CHL AD, sample 226 [reference set]


title: GBM, MES, sample 239 [reference set]


title: ATRT, SHH, sample 223 [reference set]

value: ATRT, SHH


title: MB, SHH CHL AD, sample 225 [reference set]


title: ETMR, sample 222 [reference set]

value: ETMR


title: GBM, MES, sample 234 [reference set]


title: ATRT, SHH, sample 219 [reference set]


title: MB, SHH CHL AD, sample 227 [reference set]

value: MB, SHH CHL AD


title: MB, SHH CHL AD, sample 228 [reference set]


title: ETMR, sample 218 [reference set]


title: GBM, RTK II, sample 242 [reference set]


title: ETMR, sample 221 [reference set]


title: ATRT, SHH, sample 220 [reference set]


title: MB, G4, sample 229 [reference set]

value: MB, G4


title: ATRT, SHH, sample 215 [reference set]


title: ATRT, MYC, sample 217 [reference set]

value: ATRT, MYC


title: GBM, MES, sample 240 [reference set]


title: ETMR, sample 213 [reference set]


title: HGNET, BCOR, sample 216 [reference set]


title: MB, G3, sample 202 [reference set]


title: MB, G3, sample 205 [reference set]


title: ATRT, SHH, sample 210 [reference set]


title: MB, G3, sample 206 [reference set]


title: CNS NB, FOXR2, sample 208 [reference set]

value: CNS NB, FOXR2


title: MB, G4, sample 204 [reference set]


title: MB, G3, sample 201 [reference set]


title: MB, G4, sample 203 [reference set]


title: MB, G4, sample 199 [reference set]


title: ETMR, sample 212 [reference set]


title: MB, G4, sample 193 [reference set]


title: MB, SHH INF, sample 200 [reference set]

value: MB, SHH INF


title: MB, G4, sample 191 [reference set]


title: MB, G3, sample 192 [reference set]


title: MB, G4, sample 197 [reference set]


title: ETMR, sample 195 [reference set]


title: CNS NB, FOXR2, sample 214 [reference set]


title: MB, G4, sample 198 [reference set]


title: MB, G4, sample 188 [reference set]


title: MB, G4, sample 196 [reference set]


title: CNS NB, FOXR2, sample 194 [reference set]


title: MB, SHH CHL AD, sample 190 [reference set]


title: ETMR, sample 209 [reference set]


title: MB, G3, sample 187 [reference set]


title: MB, G3, sample 186 [reference set]


title: MB, G4, sample 207 [reference set]


title: MB, SHH INF, sample 184 [reference set]


title: MB, SHH CHL AD, sample 183 [reference set]


title: MB, G4, sample 185 [reference set]


title: MB, G4, sample 180 [reference set]


title: MB, G4, sample 179 [reference set]


title: LGG, PA MID, sample 177 [reference set]

value: LGG, PA MID

value: FFPE


title: MB, SHH CHL AD, sample 182 [reference set]


title: MB, SHH INF, sample 181 [reference set]


title: LGG, PA PF, sample 178 [reference set]


title: MB, G4, sample 189 [reference set]


title: LGG, PA PF, sample 176 [reference set]


title: ETMR, sample 175 [reference set]


title: ATRT, SHH, sample 174 [reference set]


title: ATRT, SHH, sample 173 [reference set]


title: MB, G4, sample 172 [reference set]


title: MB, SHH CHL AD, sample 168 [reference set]


title: MB, G4, sample 165 [reference set]


title: MB, G4, sample 170 [reference set]


title: MB, G4, sample 166 [reference set]


title: MB, SHH CHL AD, sample 162 [reference set]


title: MB, SHH CHL AD, sample 164 [reference set]


title: MB, SHH CHL AD, sample 169 [reference set]


title: MB, G4, sample 160 [reference set]


title: MB, G4, sample 159 [reference set]


title: MB, SHH CHL AD, sample 158 [reference set]


title: MB, WNT, sample 156 [reference set]

value: MB, WNT


title: LYMPHO, sample 157 [reference set]

value: LYMPHO


title: MB, SHH CHL AD, sample 161 [reference set]


title: MB, SHH CHL AD, sample 155 [reference set]


title: MB, G4, sample 154 [reference set]


title: MB, G4, sample 171 [reference set]


title: MB, SHH CHL AD, sample 151 [reference set]


title: MB, SHH INF, sample 153 [reference set]


title: MB, SHH CHL AD, sample 152 [reference set]


title: ETMR, sample 149 [reference set]


title: ETMR, sample 148 [reference set]


title: CNS NB, FOXR2, sample 147 [reference set]


title: ETMR, sample 146 [reference set]


title: MB, SHH CHL AD, sample 141 [reference set]


title: MB, G3, sample 134 [reference set]

value: MB, G3


title: MB, SHH CHL AD, sample 167 [reference set]


title: MB, G3, sample 132 [reference set]


title: MB, SHH CHL AD, sample 163 [reference set]


title: MB, G4, sample 130 [reference set]


title: MB, G3, sample 131 [reference set]


title: EFT, CIC, sample 144 [reference set]

value: EFT, CIC


title: MB, SHH CHL AD, sample 128 [reference set]


title: MB, SHH CHL AD, sample 135 [reference set]


title: MB, G3, sample 129 [reference set]


title: PIN T,  PB A, sample 125 [reference set]

value: PIN T,  PB A


title: ATRT, SHH, sample 124 [reference set]


title: ATRT, MYC, sample 122 [reference set]


title: LGG, PA PF, sample 119 [reference set]


title: MB, WNT, sample 150 [reference set]


title: LGG, PA MID, sample 120 [reference set]


title: LGG, PA MID, sample 118 [reference set]


title: LGG, PA PF, sample 116 [reference set]


title: MB, G3, sample 133 [reference set]


title: ATRT, MYC, sample 121 [reference set]


title: ATRT, TYR, sample 107 [reference set]

value: ATRT, TYR


title: LGG, PA PF, sample 115 [reference set]

value: LGG, PA PF


title: LGG, PA PF, sample 117 [reference set]

value: Frozen


title: ATRT, TYR, sample 101 [reference set]


title: LGG, PA PF, sample 112 [reference set]


title: LGG, PA PF, sample 111 [reference set]


title: ATRT, TYR, sample 110 [reference set]


title: MB, G3, sample 99 [reference set]


title: LGG, PA PF, sample 114 [reference set]


title: MB, WNT, sample 94 [reference set]


title: ATRT, TYR, sample 108 [reference set]


title: MB, G4, sample 92 [reference set]


title: MB, G3, sample 91 [reference set]


title: ATRT, TYR, sample 105 [reference set]


title: ATRT, TYR, sample 103 [reference set]


title: ATRT, SHH, sample 109 [reference set]

value: ATRT, SHH


title: ATRT, TYR, sample 100 [reference set]


title: ATRT, SHH, sample 102 [reference set]


title: MB, G4, sample 98 [reference set]


title: ATRT, SHH, sample 104 [reference set]


title: MB, WNT, sample 84 [reference set]


title: MB, G4, sample 97 [reference set]


title: ATRT, SHH, sample 106 [reference set]


title: MB, G3, sample 96 [reference set]


title: MB, G3, sample 93 [reference set]


title: MB, G4, sample 95 [reference set]


title: LGG, PA PF, sample 78 [reference set]


title: LGG, PA MID, sample 77 [reference set]


title: MB, SHH CHL AD, sample 88 [reference set]


title: LGG, PA MID, sample 76 [reference set]


title: MB, SHH INF, sample 87 [reference set]


title: MB, SHH INF, sample 89 [reference set]


title: LGG, PA PF, sample 73 [reference set]


title: MB, WNT, sample 83 [reference set]


title: MB, WNT, sample 82 [reference set]


title: MB, G4, sample 85 [reference set]


title: MB, WNT, sample 80 [reference set]


title: LGG, PA PF, sample 70 [reference set]


title: ATRT, TYR, sample 66 [reference set]


title: ATRT, SHH, sample 63 [reference set]


title: ATRT, MYC, sample 68 [reference set]


title: LGG, PA PF, sample 74 [reference set]


title: MB, G4, sample 86 [reference set]


title: ATRT, TYR, sample 65 [reference set]


title: MB, WNT, sample 81 [reference set]


title: ATRT, SHH, sample 64 [reference set]


title: ATRT, TYR, sample 67 [reference set]


title: ATRT, MYC, sample 62 [reference set]


title: LGG, PA PF, sample 79 [reference set]


title: LGG, SEGA, sample 72 [reference set]

value: LGG, SEGA


title: MB, WNT, sample 57 [reference set]


title: MB, WNT, sample 60 [reference set]


title: MB, WNT, sample 61 [reference set]


title: MB, G3, sample 90 [reference set]


title: LGG, PA PF, sample 56 [reference set]


title: MB, WNT, sample 59 [reference set]


title: LGG, PA PF, sample 48 [reference set]


title: LGG, PA PF, sample 46 [reference set]


title: LGG, PA PF, sample 45 [reference set]


title: LGG, RGNT, sample 55 [reference set]

value: LGG, RGNT


title: LGG, PA PF, sample 47 [reference set]


title: LGG, PA MID, sample 44 [reference set]


title: LGG, PA MID, sample 42 [reference set]


title: LGG, PA MID, sample 39 [reference set]


title: LGG, PA PF, sample 51 [reference set]


title: LGG, PA PF, sample 40 [reference set]


title: LGG, PA PF, sample 71 [reference set]


title: LGG, PA PF, sample 38 [reference set]


title: LGG, PA MID, sample 52 [reference set]


title: LGG, PA PF, sample 34 [reference set]


title: LGG, PA PF, sample 49 [reference set]


title: LGG, PA PF, sample 53 [reference set]


title: GBM, G34, sample 30 [reference set]

value: GBM, G34


title: LGG, PA PF, sample 54 [reference set]


title: GBM, G34, sample 29 [reference set]


title: LGG, PA PF, sample 37 [reference set]


title: LGG, PA PF, sample 50 [reference set]


title: DMG, K27, sample 28 [reference set]

value: DMG, K27


title: GBM, G34, sample 25 [reference set]


title: LGG, PA PF, sample 43 [reference set]


title: GBM, G34, sample 23 [reference set]


title: DMG, K27, sample 26 [reference set]


title: LGG, PA PF, sample 35 [reference set]


title: LGG, PA PF, sample 36 [reference set]


title: LGG, PA PF, sample 31 [reference set]


title: CONTR, CEBM, sample 20 [reference set]

value: CONTR, CEBM


title: GBM, G34, sample 24 [reference set]


title: CONTR, CEBM, sample 15 [reference set]


title: CONTR, CEBM, sample 21 [reference set]


title: DMG, K27, sample 11 [reference set]


title: LGG, PA PF, sample 32 [reference set]


title: DMG, K27, sample 10 [reference set]


title: CONTR, CEBM, sample 16 [reference set]


title: MB, WNT, sample 58 [reference set]


title: GBM, G34, sample 14 [reference set]


title: GBM, G34, sample 27 [reference set]


title: DMG, K27, sample 22 [reference set]


title: DMG, K27, sample 12 [reference set]


title: LGG, PA PF, sample 41 [reference set]


title: DMG, K27, sample 18 [reference set]


title: ATRT, SHH, sample 13 [reference set]


title: GBM, MYCN, sample 17 [reference set]

value: GBM, MYCN


title: GBM, G34, sample 7 [reference set]


title: GBM, G34, sample 9 [reference set]


title: DMG, K27, sample 8 [reference set]


title: DMG, K27, sample 3 [reference set]


title: GBM, G34, sample 6 [reference set]


title: DMG, K27, sample 5 [reference set]


title: DMG, K27, sample 4 [reference set]


title: DMG, K27, sample 2 [reference set]


title: CONTR, CEBM, sample 19 [reference set]


title: GBM, G34, sample 1 [reference set]


title: SW-91 (267A-A24NW)

type: RNA

city: Chicago

first: Steven

middle: R

last: White

state: IL

address: 5841 S. Maryland Ave

department: Medicine

country: USA

institute: University of Chicago

description:
Mechanical injury: Mechanical injury (MI) was produced by rake tines which were 0.3 mm in diameter and spaced 0.4 mm apart). Cells then were washed in culture medium to remove debris and incubated for 8 or 24 hr in standard medium. Control cells without MI were collected at the same time intervals.  Cyclic stretch (CS) injury was performed using FX-4000T Flexcell Tension Plus system 18% elongation, at 0.5 Hz continuously for either 8 or 24 hr. Control cells were incubated on BioFlex plates for the same time intervals but not subjected to CS. For dual injury, cells were seeded (1 x 106 cells/well) onto collagen-IV coated flexible bottom BioFlex plates. When confluent, plates were washed with culture medium and mechanical rake injury done as in preceding experiments prior to mount plates into the Flexcell system and exposed to CS of the desired magnitude and durations.
Cell culture: Primary human airway epithelial cells (AEC) in submersion and differentiated airway epithelial cells (dAEC) in air liquid interface culture system were grown and maintained as described (White SR et al., Am J Physiol Lung Cell Mol Physiol 2008;295(6):L1018-1027; 2009;297(1):L164-173; 2010; 299(5): L681â€“L693).
Cell ID: Cell ID refers to a number assigned based on the collection from a donor human lung. Cells with the same ID number came from the same lung at the same time.
Culture condition: Condition refers to submersion or air liquid interface as described in cell culture references. All cells in ALI were grown in this for 3 weeks. All cells in submersion were grown to > 95% confluence.
Mechanical injury: Mechanical injury (MI) was produced by rake tines which were 0.3 mm in diameter and spaced 0.4 mm apart). Cells then were washed in culture medium to remove debris and incubated for 8 or 24 hr in standard medium. Control cells without MI were collected at the same time intervals.  Cyclic stretch (CS) injury was performed using FX-4000T Flexcell Tension Plus system 18% elongation, at 0.5 Hz continuously for either 8 or 24 hr. Control cells were incubated on BioFlex plates for the same time intervals but not subjected to CS. For dual injury, cells were seeded (1 x 106 cells/well) onto collagen-IV coated flexible bottom BioFlex plates. When confluent, plates were washed with culture medium and mechanical rake injury done as in preceding experiments prior to mount plates into the Flexcell system and exposed to CS of the desired magnitude and durations.
Cell culture: Primary human airway epithelial cells (AEC) in submersion and differentiated airway epithelial cells (dAEC) in air liquid interface culture system were grown and maintained as described (White SR et al., Am J Physiol Lung Cell Mol Physiol 2008;295(6):L1018-1027; 2009;297(1):L164-173; 2010; 299(5): L681â€“L693).
Cell ID: Cell ID refers to a number assigned based on the collection from a donor human lung. Cells with the same ID number came from the same lung at the same time.
Culture condition: Condition refers to submersion or air liquid interface as described in cell culture references. All cells in ALI were grown in this for 3 weeks. All cells in submersion were grown to > 95% confluence.

hyb_protocol: Standard Illumina hybridization protocol

scan_protocol: Standard Illumina scanning protocol

data_processing: The data were normalized using quantile normalization with GenomeStudio software licensed by Illumina Inc.

label: biotin

molecule: total RNA

source_name: human asthmatic airway epithelial cell

label_protocol: Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays

extract_protocol: RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.

tag: tissue

value: human asthmatic airway epithelial cell

tag: cell id

tag: culture condition

value: air-liquid interface culture

tag: injury duration hr

tag: mechanical injury

value: Sham


title: SW-89 (468A-S24NW)

value: submersion


title: SW-96 (483A-A24NW)


title: SW-95 (468A-A24NW)


title: SW-92 (268A-A24NW)


title: SW-94 (312A-A24NW)


title: SW-81 (297A-A8NW)


title: SW-93 (297A-A24NW)


title: SW-88 (312A-S24NW)


title: SW-82 (312A-A8NW)


title: SW-85 (267A-S24NW)


title: SW-84 (483A-A8NW)


title: SW-90 (483A-S24NW)


title: SW-83 (468A-A8NW)


title: SW-86 (268A-S24NW)


title: SW-87 (297A-S24NW)


title: SW-77 (468A-S8NW)


title: Asynchronous remodeling in DMD (MIDO-FKRP_Pos-7UP)

city: DC

first: mamta

last: giri

state: Washington. DC

address: 111 Michigan Ave

department: Center for Genetic Medicine

institute: CNMC

hyb_protocol: hybridized to Affymetrix microarrays,

scan_protocol: Standard Affymetrix protocol

data_processing: Expression console, Partek Genomics Suite, HCE 3.0

label: Biotin

source_name: vastus lateralis

label_protocol: Ten micrograms of total RNA was then reverse-transcribed into double stranded cDNA using a T7-oligo-dT primer, and cRNA was produced using two biotinylated nucleotide precursors. A 4-fold amplification of starting material (total RNA) to biotinylated cRNA was set as the minimum threshold for continuing with microarray hybridizations

extract_protocol:
Biopsies were taken generally at the time of diagnosis and were typically from the vastus lateralis
RNA was isolated using standard Trizol reagent and methods, and quality of RNA was assessed by gel electrophoresis and/or Agilent Bioanalyzer

tag: age

value: vastus lateralis

tag: pathology

value: mild

tag: Sex

value: M

tag: mutation

tag: pathology note

value: biopsy shows considerable preservation artefact, relatively mild pathology?


title: SW-78 (483A-S8NW)


title: Asynchronous remodeling in DMD (MIDO-FKRP_Pos-9UP)

value: F

value: biopsy eh, freeze artefact, dessication; mild dystrophy?


title: SW-79 (267A-A8NW)


title: SW-80 (268A-A8NW)


title: Asynchronous remodeling in DMD (MIDO-FKRP_Pos-5UP)

value: severe

value: Biopsy largely replaced by fibrofatty tissue, isolated groups of 3-10 fibers remaining, which look myopathic; all type I fibers


title: Asynchronous remodeling in DMD (MIDO-FKRP_Pos-3UP)

value: Nice biopsy, normal skeletal muscle; perhaps very slight fiber size variation


title: Asynchronous remodeling in DMD (MIDO-FKRP_Pos-8UP)

value: Nice biopsy, very mild myopathy, some hypercontracted fibers, slight fiber size variation, mild increase in central nuclei


title: SW-76 (312A-S8NW)


title: SW-75 (297A-S8NW)


title: Asynchronous remodeling in DMD (MIDO-FKRP_Pos-6UP)

value: diffuse endomysial inflammation, may be eosinophilic inclusions, little over degen/regen


title: Asynchronous remodeling in DMD (MIDO-FKRP_Pos-2UP)

value: moderate

value: Description:1rst biopsy inadequate; 2nd nice, quite focal, some severe with failed regen, some mild, focal fibrosis, manifesting carrier like


title: Asynchronous remodeling in DMD (MIDO-DYS_Pos-8UP)

value: 1 found

value: nice biopsy, many isolated necrotic fibers in


title: Asynchronous remodeling in DMD (MIDO-DYS_Pos-9UP)

value: mild chronic dystrophy, freeze artefact


title: Asynchronous remodeling in DMD (MIDO-DMD_Pos-8UP)

value: Male

value: Exon 6-16 deletion

value: Description:nice biopsy, tons of hypercontracted fibers, atrophic fibers, size variation, central nuclei, early/mid stage dystrophy, endomysial fibrosis, lots of nerve


title: Asynchronous remodeling in DMD (MIDO-DYS_Pos-3UP)

value: vastus lateralis

value: mild

value: M

value: 2 found

value: mild dystrophic, about 20% of fibers with central nuclei, some fiber size variation, very mild focal increase in endomysial connective tissue. Occassional overt necrotic fibers, some inflammation both in perimysium and p


title: Asynchronous remodeling in DMD (MIDO-DMD_Pos-2UP)

value: severe

value: Description:nice biopsy, severe dystrophy, considerable inflammation/necrosis.


title: Asynchronous remodeling in DMD (MIDO-DYS_Pos-5UP)

value: F

value: Biopsy good, but not terrific. Some freeze artefact, fiber size variation, mild moderate fibrosis, some regenerating fibers, but no overt necrosis


title: Asynchronous remodeling in DMD (MIDO-DYS_Pos-4UP)

value: nice biopsy, large amount of fat, fiber size variation and central nuclei, many areas of degeneration and regeneration, mid/end stage DYSTROPHIC


title: SW-73 (267A-S8NW)

value: human asthmatic airway epithelial cell

value: submersion

value: Sham


title: SW-70 (312A-A2NW)

value: air-liquid interface culture


title: SW-68 (268A-A2NW)