title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, with SP600125 drug pre-tx, biological replicate 3

description: Gene expression data from NHEK exposed with 0 uM SM and SP600125 pre-tx on 090805, harvested at 8 hour


title: 090805 date of exposure, NHEK 200 uM sulfur mustard, 8 hour timepoint, with SP600125 drug pre-tx, biological replicate 1

status: Public on Jun 15 2018

type: RNA

city: Aberdeen Proving Ground

first: James

middle: F

last: Dillman

state: MD

address: 3100 Ricketts Point Rd

department: Cell and Molecular Biology Branch

country: USA

institute: U.S. Army Medical Research Institute of Chemical Defense

description: Gene expression data from NHEK exposed with 200 uM SM and SP600125 pre-tx on 090805, harvested at 8 hour

hyb_protocol: Spike controls were added to 15 µg fragmented cRNA before hybridization (36h) using 10 µg of cRNA.  Arrays were washed and stained with streptavidin-phycoerythrin before being scanned on an Affymetrix GeneChip Scanner.

scan_protocol: After scanning, array images were assessed by eye to confirm scanner alignment and the absence of significant bubbles or scratches on the chip surface. The 3'/5' ratios for GAPDH and B-actin were checked for quality. BioB, BioC, BioD and CreX spike controls were also examined to determine sample quality. All arrays were scaled to a target intensity of 150 using Affymetrix GeneChip Operating System (GCOS) software.

data_processing: Raw signal intensities were imported into Partek Genomics Solutions v6.5 (Partek, St. Louis, MO) and normalized using the robust multi-array averaging (RMA) algorithm.

label: biotin

molecule: total RNA

organism: Homo sapiens

label_protocol: Total RNA was processed for hybridization to GeneChip® Human Genome U133 Plus 2.0 oligonucleotide arrays (Affymetrix, Inc., Santa Clara, CA) using the BioArray Single-Round RNA Amplification and Biotin Labeling System (Enzo Life Sciences, Inc., Farmingdale, NY).  In brief, 10 µg of total RNA was used to generate first strand cDNA by using a T7-linked oligo(dT) primer.  After second strand synthesis, in vitro transcription was performed with biotinylated UTP and CTP for cRNA amplification.

growth_protocol: Primary human epidermal keratinocytes (Lonza, Walkersville, MD) were seeded at passage 3 at 1.2x103 cells per cm2 in 25 cm2 flasks (30,000 cells/flask), and grown to approximately 80% confluency.  Cells were kept in a standard biological incubator at 37°C with 5% CO2.  Cells were fed 5 mL each day prior to exposure using KGM Complete media (Lonza, Walkersville, MD).

extract_protocol: Cell lysates were collected in 400uL 1% beta-mercaptoethanol in RLT lysis buffer and processed through QIAshredder columns (QIAGEN, Valencia, CA) per the manufacturer's instructions.  Total RNA was extracted and DNase I-treated using the RNeasy Mini Kit and RNase-Free DNase Set (QIAGEN) according to the manufacturer’s protocol.  The quantity and quality of the RNA was determined with a NanoDrop ND-1000 UV-vis spectrophotometer (Thermo Scientific, Wilmington, DE) and an Agilent bioanalyzer (Agilent Technologies, Santa Clara, CA) throughout sample processing.

treatment_protocol: Small molecule inhibitors SB 203580 (p38 inhibitor), PD 98059 (Erk inhibitor), and SP 600125 (JNK inhibitor) were prepared as 10 mM stock solutions in water or DMSO, depending on manufacturer's recommendations (Tocris Bioscience, Ellisville, MO).  One hour prior to exposure, inhibitor was added to each flask to a final concentration of 10 uM and incubated at 37°C with 5% CO2.  Cells were exposed to 0 uM or 200 uM SM in a chemical surety hood.  Cells remained in the hood in a 37°C incubator for 30 min post exposure.  Cells were returned to a standard biological incubator and harvested at 1h, 4h, or 8h post exposure.  Time matched controls were included for each group.

tag: cell type

value: primary human epidermal keratinocytes (NHEK)

tag: time point (hrs)

tag: drug inhibitor

tag: sm dose (um)


title: N88-T244

type: SRA

city: Berkeley

first: Paul

last: Yaswen

state: California

address: One Cyclotron Road, Building 977

institute: LBNL

library_source: transcriptomic

data_processing:
Basecalls performed using CASAVA version 1.9
Reads  were checked for per base/per tile sequence quality, per sequence GC content, adapter content etc. using FASTQC software
HISAT2/htseq-count pipeline with default parameters for PE reads alignments was applied assuming that a gene is an union of its exons
Raw count table was pre-filtered removing rows with all zeros through all samples. R environment and package DESeq2(Bioconductor) were used to quantify candidate genes with cutoffs for non-specific filtering and p-values = 0.1
Normalizing filtered raw counts using variance-stabilizing transformation
Genome_build: hg38
Supplementary_files_format_and_content: csv-files(comma-delimited) were generated with R

source_name: breast

growth_protocol: The wells of a 24-well cell culture plate were uniformly coated with 50µl lrECM (BME, Matrigel Basement Membrane Matrix Growth Factor Reduced, Corning) /well and allowed to polymerize at 37°C for 20 min. Organoid aliquots were thawed, diluted in baseline medium: Advanced DMEM/F12 (ThermoFisher) containing 30mM HEPES (Sigma), 1x GlutaMAX (ThermoFisher), 140 nM hydrocortisone (Sigma), 10 ng/ml EGF (Sigma), 1% PenStrep (ThermoFisher), and centrifuged twice before resuspension in 600 µl lrECM. 50µl portions were plated at the centers of the pre-coated wells. Following 1h polymerization, 500µl of pre-warmed culture medium was added to each well and organoids were incubated for 2 days at 37°C, 5% CO2 in a humidified incubator. Organoids were retrieved from lrECM by removing medium and adding 500µl of Cell Harvesting Buffer/Dispase (Corning) to each well and incubating for 1h at 37°C. Organoids were then collected and mixed with an equal volume of 0.5 mM EDTA in phosphate buffered saline (PBS), and incubated for an additional 15 minutes at room temperature before centrifugation. Organoids were then dissociated to single cells using 1ml of TryPLE (ThermoFisher) for 10 min at 37°C, while shaking. Following dissociation, the suspension was filtered through 35µm nylon mesh to obtain single cells. The cells were then washed in baseline medium, resuspended in lrECM and replated in pre-coated 24-well plates at a density of 25,000 cells/well. Following lrECM polymerization for 1 h, 500 µl medium was added per well, with indicated additional factors including EGF (50 ng/ml, Sigma), Noggin (100 ng/ml, PeproTech), R-Spondin-1 (500 ng/ml, PeproTech), Neuregulin1 (100 ng/ml, PeproTech), Jagged-1 (1 µM, AnaSpec), A 83-01 (500 nM, Tocris), SB 431542 (10 µM, Sigma), RepSox (25 µM, Sigma). ROCK inhibitor Y-27632 (10 µM, Tocris) was added to all the cultures during dissociation and for the first 2-3 days of culture. Cells were incubated for 8 to 14 days (until the mean diameter of colonies was > 100 µm) and medium was changed every other day.

extract_protocol:
RNA was isolated directly from intact cultures using RNA STAT-60 (Amsbio) following the manufacturer’s instructions, and quantitated using a Nanodrop ND-1000 spectrophotometer (Thermo Fisher).
RNA-seq libraries were prepared using the NEBNext Ultra II RNA Library Prep Kit for Illumina (New England Biolabs) from 1 µg of total RNA input per sample, following the manufacturer’s instructions.

treatment_protocol: 3D cultures from 3 specimens were exposed to 10nM estradiol or vehicle alone for 6 or 24 hours.

value: epithelial

tag: treatment

value: estradiol

tag: time

value: 24 hr


title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, with SP600125 drug pre-tx, biological replicate 2

source_name: NHEK exposed with 0 uM SM and SP600125 pre-tx on 090805, harvested at 8 hour


title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, with SP600125 drug pre-tx, biological replicate 1


title: N88-T243


title: Mouse Hyaloid P5

city: Cincinnati

first: Gowri

last: Nayak Sarangdhar

state: Ohio

address: 3333 Burnet Avenue

institute: Cincinnati Children's Hospital Medical Center

data_processing:
Adapters were trimmed from reads using cutadapt v1.8.1
Trimmed reads were then aligned to the mouse (mm10) genome with Tophat v2.0.13
Gene and isoform expression was estimated with Cufflinks v2.2.1
Genome_build: mm10
Supplementary_files_format_and_content: xlsx file containing FPKM for every gene

organism: Mus musculus

source_name: Hyaloid Vasculature

extract_protocol:
Total RNA was prepared from lysate of two hyaloid tissues at P5 in Tri Reagent (ThermoFischer Scientific) and purified by the RNeasy Micro column (Qiagen). RNA quality was verified by Agilent Bioanalyzer (Agilent Technologies).
The Ovation RNA-Seq System v2 (NuGEN) was used for RNA amplification and double-stranded cDNA construction. DNA concentration was measured by Qubit (ThermoFisher Scientific), while the DNA length was determined by the DNA 1000 Chip (Agilent Technologies). DNA library templates were then created by the Nextera XT DNA Sample Preparation Kit (Illumina) and sequenced for the paired-end sequencing with 25-30 million reads by Illumina HiSeq2500 (Illumina).

tag: strain background

value: mixed; C57BL/6 and CBA

tag: genotype/variation

value: wild type

tag: age

value: postnatal day 5

tag: tissue

value: Hyaloid Vasculature


title: 090805 date of exposure, NHEK 200 uM sulfur mustard, 8 hour timepoint, with SP600125 drug pre-tx, biological replicate 2

source_name: NHEK exposed with 200 uM SM and SP600125 pre-tx on 090805, harvested at 8 hour


title: humanBcells_mouse

city: Marseille

first: Pierre

last: Milpied

address: 163 avenue de Luminy

country: France

institute: CIML - Centre d'Immunologie de Marseille-Luminy (U1104)

data_processing:
Cell Ranger software (v1.3.1;  default parameters; index SI-GA-B6 for the humanFL5_mouse sample; index SI-GA-A4 for the humanBcells_mouse)
Reads were first aligned to mm10 and GRCh38 genomes at the same time using Cell Ranger software, resulting in barcodes assigned as murine, human, or both. To improve alignment quality and avoid read loss due to mapping to both species, we then aligned cells to mm10 and GRch38 individually. Finally, we conserved the barcodes assigned to the human genome and we excluded the barcodes identified as mouse or human/mouse doublets
Filtering: Genes detected in less than 3 cells were removed
Filtering: Cells were filtered based on the number of UMI and the number of genes detected
Genome_build: GRch38 (and mm10)
Supplementary_files_format_and_content: csv files (gene/cell matrix)

molecule: polyA RNA

source_name: normal B cells of human spleen

extract_protocol:
Cells were bulk-sorted by FACS, and mixed with mouse B cells in a 1:1 ratio
10x Genomics Chromium Single-Cell 3’ v2 protocol

treatment_protocol: Frozen live cell suspensions of normal human spleen or FL 5 were thawed, washed and resuspended in FACS buffer (PBS + 5% FCS + 2mM EDTA) at a concentration of 108 cells/ml for staining. Normal spleen cells were stained with a panel of antibodies (CD3-FITC, CD14-FITC, IgD-FITC, CD56-V450, CD20-PE-Cy7, CD38-BV785, CD10-PE) then with Live/Dead Fixable Aqua Dead Cell Stain. FL cells were only stained with Live/Dead Fixable Aqua Dead Cell Stain.

value: B cells

tag: description

value: normal B cells of human spleen mixed with mouse cells


title: humanFL5_mouse

source_name: Human follicular lymphoma cells from lymph node biopsy

value: Follicular lymphoma

value: Human follicular lymphoma mixed with mouse cells


title: N88-T242


title: Poly(I:C)_2

city: Abu Dhabi

first: Piergiorgio

last: Percipalle

state: Abu Dhabi

address: Saadiyat Campus, Abu Dhabi

department: Biology Department, Science Division

country: United Arab Emirates

institute: New York University Abu Dhabi

data_processing:
Illumina Casava1.7 software used for basecalling.
Sequenced reads were trimmed for adaptor sequence, and masked for low-complexity or low-quality sequence, then mapped to the Mus musculus GRCm38.p4 genome using tophat2 v2.1.0 with the parameters “–no-novel-junctions” and “–G” when specifying the genome file
Raw counts of mapped reads of each genes were derived using HTseq count
DESeq2 was used for differential expression analysis.
Genome_build: Mus musculus GRCm38.p4 genome
Supplementary_files_format_and_content: tab-delimited text files include raw counts for each Sample

source_name: connective tissue - MEFs

growth_protocol: Dulbecco’s modified Eagle medium (DMEM) with high glucose (Sigma), 10% fetal bovine serum (Sigma) and 100 units/ml penicillin and 100 µg/ml streptomycin (Sigma), in a humidified incubator with 5% CO2 at 37 Deg.

extract_protocol:
Total RNA was extracted using RNeasy Mini Kit (Qiagen) according to the manufacturer protocol.
Total RNA was used for library construction at the Center for Genomics and Systems Biology, New York University Abu Dhabi, using TruSeq RNA Library Prep Kit v2 (Illumina).

treatment_protocol: MEFs were staimulated by 10 ug/ml Poly(dA:dT) or Poly(I:C) using Lipofectamine 2000 (Invitrogen) as transfection regaent in Opti-MEM medium for 6 hours. Mock groups were treated only with transfection regaent.

value: connective tissue - MEFs

tag: strain

value: BALB/c

value: 10.5 day old embryos

tag: genotype

value: 10 ug/ml poly(I:C)_6 hr


title: Poly(I:C)_3


title: endometrium4_control

city: Sosnowiec

first: Urszula

last: Mazurek

address: Jedności 8

department: Department of Molecular Biology

country: Poland

institute: Medical University of Silesia

hyb_protocol: 15ug of fragmented cRNA were hybridized on HGU133A microarray (Affymetrix). Hybrydization was performed for 16h at 45C. Gene chip was washed and stained with use  GeneChip® Fluidics Station 450 - protocol EukGE-WS2v4 .

scan_protocol: Scan was made with use of GeneArray Scanner G2500A

data_processing: The data were analyzed with Affymetrix GeneChip Command Console (AGCC) Software,  PL-Grid (http://www.plgrid.pl/) , GeneSpring 13.0 (Agilent Technologies UK Limited, South Queensferry, UK)

source_name: endometrium control

label_protocol: Biotinylated cRNA were prepared according to Affymetrix protocol  from 5-8ug of total RNA (Gene Expression Analysis Technical Manual, Affymertix).

extract_protocol: Total RNA was extracted with Trizol Reagend according to the manufacturer's instructions.

value: endometrium

tag: grade


title: N88-T64

value: 6 hr


title: Poly(I:C)_1


title: 090805 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, with SP600125 drug pre-tx, biological replicate 2

description: Gene expression data from NHEK exposed with 200 uM SM and SP600125 pre-tx on 090805, harvested at 4 hour

value: primary human epidermal keratinocytes (NHEK)


title: endometrium3_cancer_G1

source_name: endometrium cancer G1

value: endometrium cancer


title: 090805 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, with SP600125 drug pre-tx, biological replicate 1

source_name: NHEK exposed with 200 uM SM and SP600125 pre-tx on 090805, harvested at 4 hour


title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, with SP600125 drug pre-tx, biological replicate 3

description: Gene expression data from NHEK exposed with 0 uM SM and SP600125 pre-tx on 090805, harvested at 4 hour


title: 090805 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, with SP600125 drug pre-tx, biological replicate 3


title: Poly(dA:dT)_3

value: 10 ug/ml poly(dA:dT)_6 hr


title: Poly(dA:dT)_2


title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, with SP600125 drug pre-tx, biological replicate 2

source_name: NHEK exposed with 0 uM SM and SP600125 pre-tx on 090805, harvested at 4 hour


title: N88-T63

value: epithelial

value: estradiol


title: Poly(dA:dT)_1

value: wild type


title: N88-T62


title: N88-C4

value: control

value: 0 hr


title: Mock_3

value: Transfection reagent alone_6 hr


title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, with SP600125 drug pre-tx, biological replicate 1


title: N88-C3


title: Mock_2


title: N88-C2


title: N88-T61


title: Mock_1


title: N88-C1


title: N182

value: primary organoid


title: 090805 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, with SP600125 drug pre-tx, biological replicate 2

description: Gene expression data from NHEK exposed with 200 uM SM and SP600125 pre-tx on 090805, harvested at 1 hour


title: N182-T244

value: 24 hr


title: Cardiomyocyte_control_ 12h_rep2

city: Montevideo

first: Gabriela

last: Libisch

address: Mataojo 2020

department: Montevideo

country: Uruguay

institute: Institut Pasteur Montevideo

description: Gene expression at 12hs of control cardiomyocyte cells

hyb_protocol: We proceeded with the hybridization, washing and assembling of the chips according to the protocol specified by Agilent. We used a Whole Human Genome (4x44k) Oligo Microarray kit  (Agilent) in a one-color design.

scan_protocol: The slides were scanned using an Agilent microarray scanner G2565BA at default settings for all parameters

data_processing: We used Agilent Feature Extraction (version 9.5.1) for quality control, data filtering, and data normalization using the defaults parameters

source_name: Primary cardiomiocyte, control, 12h, rep.2

label_protocol: 200 ng of total RNA was reverse-transcribed into cDNA, and this was transcribed into cRNA and labeled using the Low Input Quick Amp Labeling Kit, One-color (Agilent Technologies). The labeled cRNA was purified with Illustra RNAspin Mini Isolation kit (GE Healthcare, USA). The quality of each cRNA sample was verified by total yield and specificity calculated based on NanoDrop ND-1000 spectrophotometer measurements (NanoDrop Technologies, USA).

growth_protocol: Human cardiomyocytes (Celprogen) derived from adult cardiac tissue were grown in Human Cardiomyocyte Cell Culture medium (Celprogen) supplemented with 10% (v/v) heat inactivated fetal bovine serum (FBS) (Gibco-BRL) at 37°C in a 5% CO2 atmosphere.

extract_protocol: Total RNA was isolated with Direct-zol RNA MiniPrep kit (Zymo) as described by the manufacturer, and treated with RNase-free DNase to remove contaminating DNA.

treatment_protocol: Dm28C T. cruzi strain of TcI lineage was used throughout this work [28]. For infection assays, semi-confluent cardiomyocytes were infected with cell-derived trypomastigotes (10: 1 parasite: cell ratio), centrifuged for 5 minutes at 1500 rpm, and incubated for 2 hours to allow invasion, at 37°C, 5% CO2 in the cardiomyocyte medium without serum. After the interaction period, parasites were removed, and cells were washed 5-times with PBS and incubated with complete cardiomyocyte medium. Cell samples were taken at 0, 3, 6 and 12 hours after the interaction period henceforth named t0, t3, t6, and t12, respectively.

value: adult primary cardiomyocyte


title: 090805 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, with SP600125 drug pre-tx, biological replicate 1

source_name: NHEK exposed with 200 uM SM and SP600125 pre-tx on 090805, harvested at 1 hour


title: Cardiomyocyte_control_ 12h_rep1

source_name: Primary cardiomiocyte, control, 12h, rep.1


title: N182-T243


title: Cardiomyocyte_control_ 3h_rep3

description: Gene expression at 3hs of control cardiomyocyte cells

source_name: Primary cardiomiocyte, control, 3h, rep.3


title: Cardiomyocyte_infected_ 12h_rep2

description: Gene expression at 12hs post interactionof T.cruzi infected cardiomyocyte cells

source_name: Primary cardiomiocyte, infected, 12h, rep.2


title: Cardiomyocyte_infected_ 12h_rep1

description: Gene expression at 12hs post interaction of T.cruzi infected cardiomyocyte cells

source_name: Primary cardiomiocyte, infected, 12h, rep.1


title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, with SP600125 drug pre-tx, biological replicate 2

description: Gene expression data from NHEK exposed with 0 uM SM and SP600125 pre-tx on 090805, harvested at 1 hour


title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, with SP600125 drug pre-tx, biological replicate 3

source_name: NHEK exposed with 0 uM SM and SP600125 pre-tx on 090805, harvested at 1 hour


title: 090805 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, with SP600125 drug pre-tx, biological replicate 3


title: Cardiomyocyte_control_ 6h_rep2

description: Gene expression at 6hs of control cardiomyocyte cells

source_name: Primary cardiomiocyte, control, 6h, rep.2


title: Cardiomyocyte_control_ 3h_rep2

description: Gene expression at 3hs  of control cardiomyocyte cells

source_name: Primary cardiomiocyte, control, 3h, rep.2


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 8 hour timepoint, no drug, biological replicate 2

description: Gene expression data from NHEK exposed with 200 uM SM and no drug on 090729, harvested at 8 hour


title: Cardiomyocyte_infected_ 6h_rep1

description: Gene expression at 6hs post interaction of T.cruzi infected cardiomyocyte cells

source_name: Primary cardiomiocyte, infected, 6h, rep.1


title: Cardiomyocyte_control_ 6h_rep1

source_name: Primary cardiomiocyte, control, 6h, rep.1


title: Cardiomyocyte_infected_ 6h_rep2

description: Gene expression at 6hs post interactionof T.cruzi infected cardiomyocyte cells

source_name: Primary cardiomiocyte, infected, 6h, rep.2


title: N182-T242

source_name: breast


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 8 hour timepoint, no drug, biological replicate 1

source_name: NHEK exposed with 200 uM SM and no drug on 090729, harvested at 8 hour


title: 090805 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, with SP600125 drug pre-tx, biological replicate 1


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 8 hour timepoint, no drug, biological replicate 3


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, no drug, biological replicate 3

description: Gene expression data from NHEK exposed with 0 uM SM and no drug on 090729, harvested at 8 hour


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, no drug, biological replicate 2

source_name: NHEK exposed with 0 uM SM and no drug on 090729, harvested at 8 hour


title: N182-T241


title: N182-T64


title: N182-T62


title: N182-T61


title: N182-T63


title: N182-C3


title: N182-C4


title: Cardiomyocyte_control_ 3h_rep1

description: Gene expression at 3hs   of control cardiomyocyte cells

source_name: Primary cardiomiocyte, control, 3h, rep.1


title: N182-C2


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, no drug, biological replicate 1


title: Cardiomyocyte_infected_ 3h_rep2

description: Gene expression at 3hs post interactionof T.cruzi infected cardiomyocyte cells

source_name: Primary cardiomiocyte, infected, 3h, rep.2


title: N182-C1


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, no drug, biological replicate 2

description: Gene expression data from NHEK exposed with 200 uM SM and no drug on 090729, harvested at 4 hour


title: Cardiomyocyte_control_ 0h_rep2

description: Gene expression at 0hs of control cardiomyocyte cells

source_name: Primary cardiomiocyte, control, 0h, rep.2


title: Cardiomyocyte_infected_ 3h_rep3

description: Gene expression at 3hs post interaction of T.cruzi infected cardiomyocyte cells

source_name: Primary cardiomiocyte, infected, 3h, rep.3


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, no drug, biological replicate 2

description: Gene expression data from NHEK exposed with 200 uM SM and no drug on 090729, harvested at 1 hour


title: Cardiomyocyte_infected_ 3h_rep1

source_name: Primary cardiomiocyte, infected, 3h, rep.1


title: Cardiomyocyte_control_ 0h_rep1

source_name: Primary cardiomiocyte, control, 0h, rep.1


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, no drug, biological replicate 3

description: Gene expression data from NHEK exposed with 0 uM SM and no drug on 090729, harvested at 4 hour


title: Cardiomyocyte_control_ 0h_rep3

source_name: Primary cardiomiocyte, control, 0h, rep.3


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, no drug, biological replicate 1

source_name: NHEK exposed with 0 uM SM and no drug on 090729, harvested at 4 hour


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, no drug, biological replicate 1

source_name: NHEK exposed with 200 uM SM and no drug on 090729, harvested at 4 hour


title: Cardiomyocyte_infected_ 0h_rep2

description: Gene expression at 0hs post interaction of T.cruzi infected cardiomyocyte cells

source_name: Primary cardiomiocyte, infected, 0h, rep.2


title: Cardiomyocyte_infected_ 0h_rep3

source_name: Primary cardiomiocyte, infected, 0h, rep.3


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, no drug, biological replicate 1

source_name: NHEK exposed with 200 uM SM and no drug on 090729, harvested at 1 hour


title: H2-1

city: Hefei

first: Hengsheng

last: Wang

address: Changjiang Rode 130

country: China

institute: Anhui Agriculture University

data_processing:
The raw sequencing reads from all the runs were first trimmed for lo- quality regions and adapter  sequences. Reads containing N (indicating uncertain base information) greater than 10% were removed, and low quality reads were removed. Clean reads (~90% of the total read count) were mapped to the maize genome (B73_RefGen_v4 annotation build, http://plants.ensembl.org/Zea_mays/Info/Index) and a recent internal maize transcriptome using Tophat 2 with default parameters (Pertea 2010). The DESeq Bioconductor package (Version: 1.28.0) was used to normalize the mapped reads. Data quality analysis was evaluated by visualizing the results of principal component analysis (PCA).
The mapped sequence reads for all of the identified genes were used for differential expression analysis by the DESeq method. Using Cufflinks 2.2.1 and Cuffdiff, gene expression levels were calculated as reads per kilobase of transcript sequence per million base pairs sequenced (FPKM) (Trapnell et al. 2016). Based on statistical analyses, genes with a P-value < 0.05 and an absolute value |log2 ratio ≥ 1| were considered to be significant differentially expressed genes (DEGs). GO enrichment analysis was conducted using Blast2GO (https://www.blast2go.com/) with FDR < 0.05. Based on their expression patterns, the DEGs were clustered by the Genesis K-means method
Reads Per Kilobase of exon per Megabase of library size (RPKM) were calculated using a protocol from Chepelev et al., Nucleic Acids Research, 2009. In short, exons from all isoforms of a gene were merged to create one meta-transcript. The number of reads falling in the exons of this meta-transcript were counted and normalized by the size of the meta-transcript and by the size of the library.

organism: Zea mays

source_name: Stem from big flare period of high hybrid

growth_protocol: Three different maize hybrids, with extremely distinct plant height, which were further classified into low (L), middle (M) and high (H) group, were selected for RNA sequencing at three key developmental stages, namely, jointing stage (I), big flare period (II) and tasseling stage (III).

extract_protocol:
1 μg of total RNA was subjected to library synthesis using the TruSeq V2 RNA-Seq kit.  1 μg of total RNA was enriched for the Poly-A mRNA and reverse transcribed to double-stranded cDNA. The cDNA was end repaired, adenylated, and ligated with Illumina indexes prior to 12 cycles of PCR. Sequencing was performed using 12pM hybridization to a 2x100 paired end flow cell.
RNA libraries were prepared for sequencing using standard Illumina protocols

treatment_protocol: Eighteen samples from the low, middle and high hybrid at three development stages were used for RNA sequencing.

value: Stem

tag: developmental stage

value: big flare period

tag: hybrid/phenotype

value: high (H, Dan 598xES40)


title: H3-1

source_name: Stem from tasseling stage of high hybrid

value: tasseling stage


title: H2-2


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, no drug, biological replicate 3


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, no drug, biological replicate 3


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, no drug, biological replicate 2


title: H3-2


title: Ly6C+flow sorted from lung of 4T1 tumor-bearing mice

city: Lyon

first: Anne-Pierre

last: Morel

state: Rhone-Alpes

address: 28, rue Laennec, Cheney D 2nd floor

institute: Cancer Research Center of Lyon

hyb_protocol: standard Affymetrix protocol

scan_protocol: standard Affymetrix protocol

data_processing:
affymetrix-algorithm-name = sst-rma-gene-full
affymetrix-algorithm-version = 1.0
affymetrix-array-type = MTA-1_0
program-name = Expression Console
program-version = 1.4.1.46

label_protocol: standard Affymetrix protocol

extract_protocol: Extraction of total RNA was performed with Qiagen RNeasy Mini Kit according to the manufacturer's instructions.

value: 4T1 tumor-bearing mouse

value: lung


title: Cardiomyocyte_infected_ 0h_rep1

description: Gene expression at 0hs post interaction  of T.cruzi infected cardiomyocyte cells

source_name: Primary cardiomiocyte, infected, 0h, rep.1


title: H1-2

source_name: Stem from jointing stage of high hybrid

value: jointing stage


title: H1-1


title: Ly6C+flow sorted from lung of EMT6 tumor-bearing mice

value: EMT6 tumor-bearing mouse


title: N88-T241

source_name: breast

value: epithelial


title: M3-1

source_name: Stem from tasseling stage of middle hybrid

value: middle (M, Dan 598xCML444)


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 8 hour timepoint, with SB203580 drug pre-tx, biological replicate 3

description: Gene expression data from NHEK exposed with 200 uM SM and SB203580 pre-tx on 090729, harvested at 8 hour

value: primary human epidermal keratinocytes (NHEK)


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, no drug, biological replicate 3

description: Gene expression data from NHEK exposed with 0 uM SM and no drug on 090729, harvested at 1 hour


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, no drug, biological replicate 1

source_name: NHEK exposed with 0 uM SM and no drug on 090729, harvested at 1 hour


title: M2-1

source_name: Stem from big flare period of middle hybrid


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, with SB203580 drug pre-tx, biological replicate 3

description: Gene expression data from NHEK exposed with 0 uM SM and SB203580 pre-tx on 090729, harvested at 8 hour


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 8 hour timepoint, with SB203580 drug pre-tx, biological replicate 2

source_name: NHEK exposed with 200 uM SM and SB203580 pre-tx on 090729, harvested at 8 hour


title: M1-2

source_name: Stem from jointing stage of middle hybrid


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, no drug, biological replicate 2


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 8 hour timepoint, with SB203580 drug pre-tx, biological replicate 1


title: M1_R1_001_fastq.qz - Biopsy + S. Typhi Ty2 2h

city: Boston

first: Alessio

last: Fasano

state: MA

address: 114 16th Street

institute: Massachusetts General Hospital

description:
Terminal Ileum Biopsy infected with S. Typhi
Human_vs_Human_Typhi de_genes
Typhi gene_exp.diff

data_processing:
The reads generated for each RNA sample were analyzed using an Ergatis-based RNA-Seq analysis pipeline
Quality control of the sequences was performed using FastQC (version 0.10.0)
Human sequencing reads were aligned to the Homo sapiens reference genome GRCh38.78 using TopHat (version 2.1.1). Bacterial reads were aligned to Salmonella enterica serovar Typhi strain Ty2 genome (NCBI Reference Sequence: NC_004631.1) using Bowtie (version 0.12.9). The number of reads that aligned to the predicted coding regions were determined using HTSeq (version 0.4.7) [5]. Differential gene expression was analyzed using DESeq (version 1.5.24)
Genome_build: Homo sapiens reference genome GRCh38.78, Salmonella enterica serovar Typhi strain Ty2 genome (NCBI Reference Sequence: NC_004631.1)

organism:
Homo sapiens
Salmonella enterica subsp. enterica serovar Typhi str. Ty2

source_name: Tissue Biopsy + S. Typhi

extract_protocol:
Zymo Direct-Zol
RNA libraries were prepared for sequencing using standard Illumina protocols

tag: condition

value: infected tissue biopsy

value: human intestine ileum


title: M1-1


title: Sample 7 - Biopsy + S. Typhi Ty2 2h


title: L3-2

source_name: Stem from tasseling stage of low hybrid

value: low (L, Dan 598xFAPW)


title: Gm35-d21-RA3: resistant plant, aphids, rep 3

city: Ames

first: Gustavo

middle: Carlos

last: MacIntosh

state: Iowa

address: 4108 Molecular Biology Bldg., 2437 Pammel  Dr.

department: Biochemistry

institute: Iowa State University

description: Gene expression data from resistant soybean leaves after 21 days of soybean aphid colonization

hyb_protocol: 45C for 16 hours in the GeneChip hybridization oven 640 with constant rotation 60 rpm.

scan_protocol: Used GeneChip Scanner 7G and GeneChip software for image data collection and data file generation.

data_processing: Probe sets were normalized using the GC Robust Multi-array Average (GCRMA) method. The analysis was done in the R statistical software environment, using the limma package.

organism: Glycine max

source_name: third trifoliate leaves, LD05-16060 line

label_protocol: Labeling kit: One-cycle target labeling and control reagent package

growth_protocol: Growth chamber conditions: temperature was 25C, 16 hours of light per day

extract_protocol: Qiagen RNeasy Plant Mini Kit

treatment_protocol: For each aphid treated plant, ten aphids were applied, using a soft-tipped brush, to the adaxial surface of each leaflet of the third trifoliate, for a total of thirty aphids per plant. At least 21 of the aphids were adults. Plants were covered with nets. Control plants were manipulated similarly but no aphids were introduced.

value: V3 leaf

value: aphids


title: Gm36-d21-SA3: susceptible plant, aphids, rep 3

description: Gene expression data from susceptible soybean leaves after 21 days of soybean aphid colonization

source_name: third trifoliate leaves, SD01-76R line


title: endometrium2_cancer_G1

source_name: endometrium cancer G1

value: endometrium cancer


title: Gm33-d21-SC3: susceptible plant, control, rep 3

description: Gene expression data from susceptible soybean leaves, control without aphids (21 days)

value: control


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, with SB203580 drug pre-tx, biological replicate 2

source_name: NHEK exposed with 0 uM SM and SB203580 pre-tx on 090729, harvested at 8 hour

tag: cell type


title: Sample 6 - Biopsy + S. Typhi Ty2 2h


title: Gm32-d21-SC2: susceptible plant, control, rep 2


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, with SB203580 drug pre-tx, biological replicate 2

description: Gene expression data from NHEK exposed with 200 uM SM and SB203580 pre-tx on 090729, harvested at 4 hour

tag: time point (hrs)


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, with SB203580 drug pre-tx, biological replicate 1

source_name: NHEK exposed with 200 uM SM and SB203580 pre-tx on 090729, harvested at 4 hour

tag: drug inhibitor


title: Sample 5 - Biopsy + S. Typhi Ty2 2h


title: Gm34-d21-RC3: resistant plant, control, rep 3

description: Gene expression data from resistant soybean leaves, control without aphids (21 days)


title: Sample 4 - Biopsy + S. Typhi Ty2 2h


title: L3-1

value: Stem


title: Gm29-d21-RA2: resistant plant, aphids, rep 2


title: B3_R1_001.fastq.gz- S. Typhi Ty2 in DMEM 2h

description:
Salmonella Typhi
Typhi gene_exp.diff

organism: Salmonella enterica subsp. enterica serovar Typhi str. Ty2

source_name: Salmonella Typhi

extract_protocol:
Qiagen RNAeasy
RNA libraries were prepared for sequencing using standard Illumina protocols

value: bacterial culture


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 4 hour timepoint, with SB203580 drug pre-tx, biological replicate 3

tag: sm dose (um)


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 8 hour timepoint, with SB203580 drug pre-tx, biological replicate 1


title: Gm31-d21-SA2: susceptible plant, aphids, rep 2

tag: treatment


title: Gm28-d21-RA1: resistant plant, aphids, rep 1


title: Gm30-d21-RC2: resistant plant, control, rep 2


title: L1-1

source_name: Stem from jointing stage of low hybrid


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, with SB203580 drug pre-tx, biological replicate 2

description: Gene expression data from NHEK exposed with 0 uM SM and SB203580 pre-tx on 090729, harvested at 4 hour


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, with SB203580 drug pre-tx, biological replicate 1

source_name: NHEK exposed with 0 uM SM and SB203580 pre-tx on 090729, harvested at 4 hour


title: PR

city: Haikou

first: rui

last: xiong

address: Renmin Street

institute: Hainan University

description:
150214_I709_FCC6NENACXX_L1_WHBANfysRAAHRAAPEI-22
processed data file: CR-VS-PR.GeneDiffExpFilter.txt

data_processing:
Primary sequencing data that produced by Illumina HiSeqTM 2000
raw reads is subjected to quality control (QC) that determine if a resequencing step is needed
After QC, raw reads are filtered into clean reads which will be aligned to the reference sequences.
If alignment result passes QC, we will proceed with downstream analysis including gene expression and deep analysis based on gene expression
we also can perform deep analysis based on DEGs,including Gene Ontology (GO) enrichment analysis,Pathway enrichment analysis
Genome_build: ASM31385v2
Supplementary_files_format_and_content: excel files include gene id, gene length,expression,FPKM,log2 Ratio,P-value,FDR; the gene ids are searchable at http://banana-genome-hub.southgreen.fr/

organism: Musa acuminata subsp. malaccensis

source_name: root of -P treatment

growth_protocol: Banana seedlings at a uniform four-leaf stage were taken from planting bags and their roots carefully washed clean. The seedlings were then transferred to 3L pots filled with clean sand for recovery, cultivating in a greenhouse at 28 to 35℃ in the summer of Hainan, watering with clean water during this time. After two weeks of growth recovery, the seedlings were supplied with 1/4-strength Hoagland’s nutrient solution(Hoagland and Arnon 1950) for two weeks and then supplied with half-strength Hoagland’s nutrient solution containing either 136mg/L PO43−,or 0 mg/L PO43−, designated WT and -P treatments, respectively. Every banana seedling was supplied with about 120 mL of Hoagland’s nutrient solution every two days, and treated for a total of 60 days.

extract_protocol:
RNA was harvested using CTAB reagent
The total RNA samples are first treated with DNase I to degrade any possible DNA contamination. Then the mRNA is enriched by using the oligo(dT) magnetic beads. Mixed with the fragmentation buffer, the mRNA is fragmented into short fragments. Then the first strand of cDNA is synthesized by using random hexamer-primer. Buffer, dNTPs, RNase H and DNA polymerase I are added to synthesize the second strand. The double strand cDNA is purified with magnetic beads. End reparation and 3’-end single nucleotide A (adenine) addition is then performed. Finally, sequencing adaptors are ligated to the fragments. The fragments are enriched by PCR amplification. During the QC step, Agilent 2100 Bioanaylzer and ABI StepOnePlus Real-Time PCR System are used to qualify and quantify of the sample library. The library products are ready for sequencing via Illumina HiSeqTM 2000.

value: wild type

tag: development stage

value: 60 days

value: 0 mg/L PO43− (Pi deficit stress)

value: banana seedling

tag: tissue subtype

value: root


title: B2_R1_001.fastq.gz- S. Typhi Ty2 in DMEM 2h

description:
Salmonella Typhi
Typhi gene_exp.diff


title: Gm26-d21-RC1: resistant plant, control, rep 1


title: L2-1

source_name: Stem from big flare period of low hybrid

value: big flare period


title: B1_R1_001.fastq.gz- S. Typhi Ty2 in DMEM 2h

description:
Salmonella Typhi
Typhi gene_exp.diff


title: PL

description:
150214_I709_FCC6NENACXX_L1_WHBANfysRAADRAAPEI-18
processed data file: CL-VS-PL.GeneDiffExpFilter.txt

source_name: aboveground part of -P treatment

value: aboveground part


title: CL

description:
150214_I709_FCC6NENACXX_L1_WHBANfysRAABRAAPEI-16
processed data file: CL-VS-PL.GeneDiffExpFilter.txt

source_name: aboveground part of WT

value: 136mg/L PO43−


title: Sample 8 - S. Typhi Ty2 in DMEM 2h

description:
Salmonella Typhi
Typhi gene_exp.diff


title: Gm27-d21-SC1: susceptible plant, control, rep 1


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 4 hour timepoint, with SB203580 drug pre-tx, biological replicate 3

value: primary human epidermal keratinocytes (NHEK)


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, with SB203580 drug pre-tx, biological replicate 2

description: Gene expression data from NHEK exposed with 200 uM SM and SB203580 pre-tx on 090729, harvested at 1 hour


title: CR

description:
150214_I709_FCC6NENACXX_L1_WHBANfysRAAARAAPEI-15
processed data file: CR-VS-PR.GeneDiffExpFilter.txt

source_name: root of WT


title: Gm25-d21-SA1: susceptible plant, aphids, rep 1


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, with SB203580 drug pre-tx, biological replicate 1

source_name: NHEK exposed with 200 uM SM and SB203580 pre-tx on 090729, harvested at 1 hour


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, with SB203580 drug pre-tx, biological replicate 1

description: Gene expression data from NHEK exposed with 0 uM SM and SB203580 pre-tx on 090729, harvested at 1 hour


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, with SB203580 drug pre-tx, biological replicate 2

source_name: NHEK exposed with 0 uM SM and SB203580 pre-tx on 090729, harvested at 1 hour


title: 090729 date of exposure, NHEK 200 uM sulfur mustard, 1 hour timepoint, with SB203580 drug pre-tx, biological replicate 3


title: 090729 date of exposure, NHEK 0 uM sulfur mustard, 1 hour timepoint, with SB203580 drug pre-tx, biological replicate 3


title: S374_rabbit_WT4_CD4_p1_No_Cell

status: Public on Jun 14 2018

first: Asaf

last: Madi

address: 60 Fenwood Road, BTM 10016F

department: Neurology

institute: BWH

description:
Single cell RNAseq
R5_rsem.genes.counts.matrix.TMM_normalized.FPKM

data_processing:
paired reads were mapped to mouse annotation mm10 using Bowtie (allowing a maximum of one mismatch in seed alignment, and suppressing reads that had more than 10 valid alignments).
TPMs were computed using RSEM, and log2(TPM+1) values were used for subsequent analyses.
filtered out low quality cells and cell doublets, maintaining for subsequent analysis the cells that had (1) 1,000-4,000 detected genes (defined by at least one mapped read), (2) at least 200,000 reads mapped to the transcriptome, and (3) at least 50% of the reads mapped to the transcriptome, ending with a total of 707 CD4+ and 825 CD8+ WT TILs and 376 CD4+ and 394 CD8+ IL27ra KO TILs.
Genome_build: mm10

source_name: Tumor B16F10 melanoma

extract_protocol:
5 µl lysis buffer comprised of Buffer TCL (Qiagen) plus 1% 2-mercaptoethanol.
Plates were then spun down for one minute at 3000rpm and immediately frozen at -80°C. Cells were thawed and RNA was isolated with 2.2x RNAClean SPRI beads (Beckman Coulter Genomics) without final elution. The beads were then air-dried and processed immediately for cDNA synthesis. Samples were then processed using the Smart-seq2 protocol. This was followed by making a 25µl reaction mix for each PCR and performing 21 cycles for cDNA amplification. Then 0.25 ng cDNA from each cell and ¼ of the standard Illumina NexteraXT reaction volume were used in both the tagmentation and final PCR amplification steps

treatment_protocol: Tumor infiltrating CD8+ T cells were isolated from WT and IL27ra KO B16F10 melanoma bearing mice.

value: Tumor

tag: genotype/variation


title: S371_rabbit_WT4_CD4_p1_SC


title: S372_rabbit_WT4_CD4_p1_SC


title: S373_rabbit_WT4_CD4_p1_Population


title: S383_rabbit_WT4_CD4_p1_SC


title: S377_rabbit_WT4_CD4_p1_SC


title: S379_rabbit_WT4_CD4_p1_SC


title: S381_rabbit_WT4_CD4_p1_SC


title: S384_rabbit_WT4_CD4_p1_SC


title: S382_rabbit_WT4_CD4_p1_SC


title: S380_rabbit_WT4_CD4_p1_SC


title: S375_rabbit_WT4_CD4_p1_SC


title: S376_rabbit_WT4_CD4_p1_SC


title: S370_rabbit_WT4_CD4_p1_SC


title: S368_rabbit_WT4_CD4_p1_SC


title: S367_rabbit_WT4_CD4_p1_SC


title: S369_rabbit_WT4_CD4_p1_SC


title: S365_rabbit_WT4_CD4_p1_SC


title: S363_rabbit_WT4_CD4_p1_SC


title: S378_rabbit_WT4_CD4_p1_SC


title: S362_rabbit_WT4_CD4_p1_SC


title: S361_rabbit_WT4_CD4_p1_SC


title: S366_rabbit_WT4_CD4_p1_SC


title: S360_rabbit_WT4_CD4_p1_SC


title: S364_rabbit_WT4_CD4_p1_SC


title: S358_rabbit_WT4_CD4_p1_SC


title: S356_rabbit_WT4_CD4_p1_SC


title: S359_rabbit_WT4_CD4_p1_SC


title: S355_rabbit_WT4_CD4_p1_SC


title: S354_rabbit_WT4_CD4_p1_SC


title: S353_rabbit_WT4_CD4_p1_SC


title: S348_rabbit_WT4_CD4_p1_SC


title: S346_rabbit_WT4_CD4_p1_SC


title: S349_rabbit_WT4_CD4_p1_SC


title: S352_rabbit_WT4_CD4_p1_SC


title: S344_rabbit_WT4_CD4_p1_SC


title: S347_rabbit_WT4_CD4_p1_SC


title: S350_rabbit_WT4_CD4_p1_SC


title: S345_rabbit_WT4_CD4_p1_SC


title: S342_rabbit_WT4_CD4_p1_SC


title: S339_rabbit_WT4_CD4_p1_SC


title: S338_rabbit_WT4_CD4_p1_SC


title: S336_rabbit_WT4_CD4_p1_SC


title: S337_rabbit_WT4_CD4_p1_SC


title: S335_rabbit_WT4_CD4_p1_SC


title: S333_rabbit_WT4_CD4_p1_SC


title: S334_rabbit_WT4_CD4_p1_SC


title: S332_rabbit_WT4_CD4_p1_SC


title: S357_rabbit_WT4_CD4_p1_SC


title: S343_rabbit_WT4_CD4_p1_SC


title: S331_rabbit_WT4_CD4_p1_SC


title: S351_rabbit_WT4_CD4_p1_SC


title: S330_rabbit_WT4_CD4_p1_SC


title: S327_rabbit_WT4_CD4_p1_SC


title: S328_rabbit_WT4_CD4_p1_SC


title: S329_rabbit_WT4_CD4_p1_SC


title: S340_rabbit_WT4_CD4_p1_SC


title: S326_rabbit_WT4_CD4_p1_SC


title: S341_rabbit_WT4_CD4_p1_SC


title: S323_rabbit_WT4_CD4_p1_SC


title: S321_rabbit_WT4_CD4_p1_SC


title: S322_rabbit_WT4_CD4_p1_SC


title: S320_rabbit_WT4_CD4_p1_SC


title: S317_rabbit_WT4_CD4_p1_SC


title: S314_rabbit_WT4_CD4_p1_SC


title: S315_rabbit_WT4_CD4_p1_SC


title: S324_rabbit_WT4_CD4_p1_SC


title: S316_rabbit_WT4_CD4_p1_SC


title: S313_rabbit_WT4_CD4_p1_SC


title: S312_rabbit_WT4_CD4_p1_SC


title: S310_rabbit_WT4_CD4_p1_SC


title: S319_rabbit_WT4_CD4_p1_SC


title: S308_rabbit_WT4_CD4_p1_SC


title: S311_rabbit_WT4_CD4_p1_SC


title: S309_rabbit_WT4_CD4_p1_SC


title: S306_rabbit_WT4_CD4_p1_SC


title: S325_rabbit_WT4_CD4_p1_SC


title: S304_rabbit_WT4_CD4_p1_SC


title: S303_rabbit_WT4_CD4_p1_SC


title: S302_rabbit_WT4_CD4_p1_SC


title: S307_rabbit_WT4_CD4_p1_SC


title: S300_rabbit_WT4_CD4_p1_SC


title: S298_rabbit_WT4_CD4_p1_SC


title: S305_rabbit_WT4_CD4_p1_SC


title: S296_rabbit_WT4_CD4_p1_SC


title: S318_rabbit_WT4_CD4_p1_SC


title: S297_rabbit_WT4_CD4_p1_SC


title: S294_rabbit_WT4_CD4_p1_SC


title: S292_rabbit_WT4_CD4_p1_SC


title: S291_rabbit_WT4_CD4_p1_SC


title: S289_rabbit_WT4_CD4_p1_SC


title: S288_dog_KO4_CD8_p3_SC


title: S286_dog_KO4_CD8_p3_SC


title: S284_dog_KO4_CD8_p3_SC


title: S282_dog_KO4_CD8_p3_SC


title: S287_dog_KO4_CD8_p3_SC


title: S295_rabbit_WT4_CD4_p1_SC


title: S283_dog_KO4_CD8_p3_SC


title: S285_dog_KO4_CD8_p3_SC


title: S280_dog_KO4_CD8_p3_SC


title: S279_dog_KO4_CD8_p3_SC


title: S301_rabbit_WT4_CD4_p1_SC


title: S299_rabbit_WT4_CD4_p1_SC


title: S278_dog_KO4_CD8_p3_No_Cell


title: S276_dog_KO4_CD8_p3_SC


title: S275_dog_KO4_CD8_p3_SC


title: S273_dog_KO4_CD8_p3_SC


title: S272_dog_KO4_CD8_p3_SC


title: S290_rabbit_WT4_CD4_p1_SC


title: S269_dog_KO4_CD8_p3_SC


title: S270_dog_KO4_CD8_p3_SC


title: S293_rabbit_WT4_CD4_p1_SC


title: S268_dog_KO4_CD8_p3_SC


title: S274_dog_KO4_CD8_p3_SC


title: S271_dog_KO4_CD8_p3_SC


title: S267_dog_KO4_CD8_p3_SC


title: S266_dog_KO4_CD8_p3_SC


title: S281_dog_KO4_CD8_p3_SC


title: S262_dog_KO4_CD8_p3_SC


title: S261_dog_KO4_CD8_p3_SC


title: S263_dog_KO4_CD8_p3_SC


title: S265_dog_KO4_CD8_p3_SC


title: S258_dog_KO4_CD8_p3_SC


title: S264_dog_KO4_CD8_p3_SC


title: S260_dog_KO4_CD8_p3_SC


title: S259_dog_KO4_CD8_p3_SC


title: S255_dog_KO4_CD8_p3_SC


title: S254_dog_KO4_CD8_p3_SC


title: S277_dog_KO4_CD8_p3_Population


title: S256_dog_KO4_CD8_p3_SC


title: S253_dog_KO4_CD8_p3_SC


title: S252_dog_KO4_CD8_p3_SC


title: S257_dog_KO4_CD8_p3_SC


title: S249_dog_KO4_CD8_p3_SC


title: S246_dog_KO4_CD8_p3_SC


title: S251_dog_KO4_CD8_p3_SC


title: S247_dog_KO4_CD8_p3_SC


title: S250_dog_KO4_CD8_p3_SC


title: S244_dog_KO4_CD8_p3_SC


title: S243_dog_KO4_CD8_p3_SC


title: S245_dog_KO4_CD8_p3_SC


title: S242_dog_KO4_CD8_p3_SC


title: S248_dog_KO4_CD8_p3_SC


title: S241_dog_KO4_CD8_p3_SC


title: S240_dog_KO4_CD8_p3_SC


title: S237_dog_KO4_CD8_p3_SC


title: S238_dog_KO4_CD8_p3_SC


title: S234_dog_KO4_CD8_p3_SC


title: S235_dog_KO4_CD8_p3_SC


title: S232_dog_KO4_CD8_p3_SC


title: S236_dog_KO4_CD8_p3_SC


title: S230_dog_KO4_CD8_p3_SC


title: S231_dog_KO4_CD8_p3_SC


title: S225_dog_KO4_CD8_p3_SC


title: S226_dog_KO4_CD8_p3_SC


title: S224_dog_KO4_CD8_p3_SC


title: S228_dog_KO4_CD8_p3_SC


title: S223_dog_KO4_CD8_p3_SC


title: S221_dog_KO4_CD8_p3_SC


title: S227_dog_KO4_CD8_p3_SC


title: S222_dog_KO4_CD8_p3_SC


title: S218_dog_KO4_CD8_p3_SC


title: S217_dog_KO4_CD8_p3_SC


title: S219_dog_KO4_CD8_p3_SC


title: S216_dog_KO4_CD8_p3_SC


title: S239_dog_KO4_CD8_p3_SC


title: S233_dog_KO4_CD8_p3_SC


title: S212_dog_KO4_CD8_p3_SC


title: S214_dog_KO4_CD8_p3_SC


title: S211_dog_KO4_CD8_p3_SC


title: S215_dog_KO4_CD8_p3_SC


title: S220_dog_KO4_CD8_p3_SC


title: S210_dog_KO4_CD8_p3_SC


title: S208_dog_KO4_CD8_p3_SC


title: S206_dog_KO4_CD8_p3_SC


title: S213_dog_KO4_CD8_p3_SC


title: S207_dog_KO4_CD8_p3_SC


title: S209_dog_KO4_CD8_p3_SC


title: S205_dog_KO4_CD8_p3_SC


title: S229_dog_KO4_CD8_p3_SC


title: S204_dog_KO4_CD8_p3_SC


title: S203_dog_KO4_CD8_p3_SC


title: S202_dog_KO4_CD8_p3_SC


title: S201_dog_KO4_CD8_p3_SC


title: S200_dog_KO4_CD8_p3_SC


title: S198_dog_KO4_CD8_p3_SC


title: S199_dog_KO4_CD8_p3_SC


title: S197_dog_KO4_CD8_p3_SC


title: S196_dog_KO4_CD8_p3_SC


title: S195_dog_KO4_CD8_p3_SC


title: S194_dog_KO4_CD8_p3_SC


title: S192_cat_KO4_CD4_p4_SC


title: S193_dog_KO4_CD8_p3_SC


title: S191_cat_KO4_CD4_p4_SC


title: S190_cat_KO4_CD4_p4_SC


title: S189_cat_KO4_CD4_p4_SC


title: S185_cat_KO4_CD4_p4_SC


title: S186_cat_KO4_CD4_p4_SC


title: S182_cat_KO4_CD4_p4_No_Cell


title: S188_cat_KO4_CD4_p4_SC


title: S183_cat_KO4_CD4_p4_SC


title: S187_cat_KO4_CD4_p4_SC


title: S177_cat_KO4_CD4_p4_SC


title: S184_cat_KO4_CD4_p4_SC


title: S178_cat_KO4_CD4_p4_SC


title: S180_cat_KO4_CD4_p4_SC


title: S176_cat_KO4_CD4_p4_SC


title: S173_cat_KO4_CD4_p4_SC


title: S175_cat_KO4_CD4_p4_SC


title: S167_cat_KO4_CD4_p4_SC


title: S170_cat_KO4_CD4_p4_SC


title: S171_cat_KO4_CD4_p4_SC


title: S168_cat_KO4_CD4_p4_SC


title: S169_cat_KO4_CD4_p4_SC


title: S172_cat_KO4_CD4_p4_SC


title: S165_cat_KO4_CD4_p4_SC


title: S166_cat_KO4_CD4_p4_SC


title: S164_cat_KO4_CD4_p4_SC


title: S163_cat_KO4_CD4_p4_SC


title: S162_cat_KO4_CD4_p4_SC


title: S161_cat_KO4_CD4_p4_SC


title: S159_cat_KO4_CD4_p4_SC


title: S181_cat_KO4_CD4_p4_Population


title: S179_cat_KO4_CD4_p4_SC


title: S160_cat_KO4_CD4_p4_SC


title: S157_cat_KO4_CD4_p4_SC


title: S151_cat_KO4_CD4_p4_SC


title: S158_cat_KO4_CD4_p4_SC


title: S156_cat_KO4_CD4_p4_SC


title: S155_cat_KO4_CD4_p4_SC


title: S153_cat_KO4_CD4_p4_SC


title: S152_cat_KO4_CD4_p4_SC


title: S154_cat_KO4_CD4_p4_SC


title: S146_cat_KO4_CD4_p4_SC


title: S149_cat_KO4_CD4_p4_SC


title: S145_cat_KO4_CD4_p4_SC


title: S141_cat_KO4_CD4_p4_SC


title: S174_cat_KO4_CD4_p4_SC


title: S144_cat_KO4_CD4_p4_SC


title: S142_cat_KO4_CD4_p4_SC


title: S139_cat_KO4_CD4_p4_SC


title: S138_cat_KO4_CD4_p4_SC


title: S140_cat_KO4_CD4_p4_SC


title: S137_cat_KO4_CD4_p4_SC


title: S135_cat_KO4_CD4_p4_SC


title: S132_cat_KO4_CD4_p4_SC


title: S136_cat_KO4_CD4_p4_SC


title: S131_cat_KO4_CD4_p4_SC


title: S134_cat_KO4_CD4_p4_SC


title: S133_cat_KO4_CD4_p4_SC


title: S150_cat_KO4_CD4_p4_SC


title: S128_cat_KO4_CD4_p4_SC


title: S129_cat_KO4_CD4_p4_SC


title: S143_cat_KO4_CD4_p4_SC


title: S147_cat_KO4_CD4_p4_SC


title: S126_cat_KO4_CD4_p4_SC


title: S121_cat_KO4_CD4_p4_SC


title: S125_cat_KO4_CD4_p4_SC


title: S115_cat_KO4_CD4_p4_SC


title: S124_cat_KO4_CD4_p4_SC


title: S148_cat_KO4_CD4_p4_SC


title: S114_cat_KO4_CD4_p4_SC


title: S117_cat_KO4_CD4_p4_SC


title: S120_cat_KO4_CD4_p4_SC


title: S123_cat_KO4_CD4_p4_SC


title: S127_cat_KO4_CD4_p4_SC


title: S122_cat_KO4_CD4_p4_SC


title: S112_cat_KO4_CD4_p4_SC


title: S118_cat_KO4_CD4_p4_SC


title: S116_cat_KO4_CD4_p4_SC


title: S119_cat_KO4_CD4_p4_SC


title: S105_cat_KO4_CD4_p4_SC


title: S109_cat_KO4_CD4_p4_SC


title: S104_cat_KO4_CD4_p4_SC


title: S113_cat_KO4_CD4_p4_SC


title: S108_cat_KO4_CD4_p4_SC


title: S107_cat_KO4_CD4_p4_SC


title: S110_cat_KO4_CD4_p4_SC


title: S103_cat_KO4_CD4_p4_SC


title: S99_cat_KO4_CD4_p4_SC


title: S98_cat_KO4_CD4_p4_SC


title: S102_cat_KO4_CD4_p4_SC


title: S101_cat_KO4_CD4_p4_SC


title: S97_cat_KO4_CD4_p4_SC


title: S96_bird_WT4_CD8_p3_SC


title: S106_cat_KO4_CD4_p4_SC


title: S90_bird_WT4_CD8_p3_SC


title: S111_cat_KO4_CD4_p4_SC


title: S95_bird_WT4_CD8_p3_SC


title: S93_bird_WT4_CD8_p3_SC


title: S94_bird_WT4_CD8_p3_SC


title: S89_bird_WT4_CD8_p3_SC


title: S88_bird_WT4_CD8_p3_SC


title: S91_bird_WT4_CD8_p3_SC


title: S84_bird_WT4_CD8_p3_SC


title: S85_bird_WT4_CD8_p3_Population


title: S82_bird_WT4_CD8_p3_SC


title: S83_bird_WT4_CD8_p3_SC


title: S81_bird_WT4_CD8_p3_SC


title: S92_bird_WT4_CD8_p3_SC


title: S79_bird_WT4_CD8_p3_SC


title: S80_bird_WT4_CD8_p3_SC


title: S77_bird_WT4_CD8_p3_SC


title: S78_bird_WT4_CD8_p3_SC


title: S74_bird_WT4_CD8_p3_SC


title: S76_bird_WT4_CD8_p3_SC


title: S72_bird_WT4_CD8_p3_SC


title: S73_bird_WT4_CD8_p3_SC


title: S75_bird_WT4_CD8_p3_SC


title: S70_bird_WT4_CD8_p3_SC


title: S87_bird_WT4_CD8_p3_SC


title: S71_bird_WT4_CD8_p3_SC


title: S86_bird_WT4_CD8_p3_No_Cell


title: S69_bird_WT4_CD8_p3_SC


title: S68_bird_WT4_CD8_p3_SC


title: S63_bird_WT4_CD8_p3_SC


title: S67_bird_WT4_CD8_p3_SC


title: S100_cat_KO4_CD4_p4_SC


title: S65_bird_WT4_CD8_p3_SC


title: S64_bird_WT4_CD8_p3_SC


title: S62_bird_WT4_CD8_p3_SC


title: S59_bird_WT4_CD8_p3_SC


title: S58_bird_WT4_CD8_p3_SC


title: S57_bird_WT4_CD8_p3_SC


title: S60_bird_WT4_CD8_p3_SC


title: S56_bird_WT4_CD8_p3_SC


title: S49_bird_WT4_CD8_p3_SC


title: S48_bird_WT4_CD8_p3_SC


title: S54_bird_WT4_CD8_p3_SC


title: S46_bird_WT4_CD8_p3_SC


title: S45_bird_WT4_CD8_p3_SC


title: S51_bird_WT4_CD8_p3_SC


title: S50_bird_WT4_CD8_p3_SC


title: S66_bird_WT4_CD8_p3_SC


title: S52_bird_WT4_CD8_p3_SC


title: S38_bird_WT4_CD8_p3_SC


title: S43_bird_WT4_CD8_p3_SC


title: S47_bird_WT4_CD8_p3_SC


title: S61_bird_WT4_CD8_p3_SC


title: S37_bird_WT4_CD8_p3_SC


title: S35_bird_WT4_CD8_p3_SC


title: S42_bird_WT4_CD8_p3_SC


title: S32_bird_WT4_CD8_p3_SC


title: S44_bird_WT4_CD8_p3_SC


title: S55_bird_WT4_CD8_p3_SC


title: S31_bird_WT4_CD8_p3_SC


title: S41_bird_WT4_CD8_p3_SC


title: S33_bird_WT4_CD8_p3_SC


title: S30_bird_WT4_CD8_p3_SC


title: S40_bird_WT4_CD8_p3_SC


title: S130_cat_KO4_CD4_p4_SC


title: S53_bird_WT4_CD8_p3_SC


title: S39_bird_WT4_CD8_p3_SC


title: S36_bird_WT4_CD8_p3_SC


title: S29_bird_WT4_CD8_p3_SC


title: S24_bird_WT4_CD8_p3_SC


title: S34_bird_WT4_CD8_p3_SC


title: S22_bird_WT4_CD8_p3_SC


title: S18_bird_WT4_CD8_p3_SC


title: S28_bird_WT4_CD8_p3_SC


title: S27_bird_WT4_CD8_p3_SC


title: S19_bird_WT4_CD8_p3_SC


title: S17_bird_WT4_CD8_p3_SC


title: S14_bird_WT4_CD8_p3_SC


title: S15_bird_WT4_CD8_p3_SC


title: S16_bird_WT4_CD8_p3_SC


title: S21_bird_WT4_CD8_p3_SC


title: S6_bird_WT4_CD8_p3_SC


title: S12_bird_WT4_CD8_p3_SC


title: S4_bird_WT4_CD8_p3_SC


title: S11_bird_WT4_CD8_p3_SC


title: S9_bird_WT4_CD8_p3_SC


title: S10_bird_WT4_CD8_p3_SC


title: S7_bird_WT4_CD8_p3_SC


title: S8_bird_WT4_CD8_p3_SC


title: S3_bird_WT4_CD8_p3_SC


title: S13_bird_WT4_CD8_p3_SC


title: S20_bird_WT4_CD8_p3_SC


title: S384_rabbit_KO4_CD8_p2_SC

description:
Single cell RNAseq
R4_rsem.genes.counts.matrix.TMM_normalized.FPKM

tag: tag


title: S5_bird_WT4_CD8_p3_SC

tag: tissue


title: S26_bird_WT4_CD8_p3_SC


title: S1_bird_WT4_CD8_p3_SC


title: S2_bird_WT4_CD8_p3_SC


title: S25_bird_WT4_CD8_p3_SC


title: S381_rabbit_KO4_CD8_p2_SC


title: S380_rabbit_KO4_CD8_p2_SC


title: S382_rabbit_KO4_CD8_p2_SC


title: S378_rabbit_KO4_CD8_p2_SC


title: S379_rabbit_KO4_CD8_p2_SC


title: S377_rabbit_KO4_CD8_p2_SC


title: S375_rabbit_KO4_CD8_p2_SC


title: S371_rabbit_KO4_CD8_p2_SC


title: S372_rabbit_KO4_CD8_p2_SC


title: S373_rabbit_KO4_CD8_p2_Population


title: S369_rabbit_KO4_CD8_p2_SC


title: S363_rabbit_KO4_CD8_p2_SC


title: S23_bird_WT4_CD8_p3_SC


title: S367_rabbit_KO4_CD8_p2_SC


title: S366_rabbit_KO4_CD8_p2_SC


title: S365_rabbit_KO4_CD8_p2_SC


title: S383_rabbit_KO4_CD8_p2_SC


title: S359_rabbit_KO4_CD8_p2_SC


title: S368_rabbit_KO4_CD8_p2_SC


title: S353_rabbit_KO4_CD8_p2_SC


title: S354_rabbit_KO4_CD8_p2_SC


title: S358_rabbit_KO4_CD8_p2_SC


title: S352_rabbit_KO4_CD8_p2_SC


title: S355_rabbit_KO4_CD8_p2_SC


title: S357_rabbit_KO4_CD8_p2_SC


title: S351_rabbit_KO4_CD8_p2_SC


title: S356_rabbit_KO4_CD8_p2_SC


title: S349_rabbit_KO4_CD8_p2_SC


title: S348_rabbit_KO4_CD8_p2_SC


title: S370_rabbit_KO4_CD8_p2_SC


title: S350_rabbit_KO4_CD8_p2_SC


title: S360_rabbit_KO4_CD8_p2_SC


title: S346_rabbit_KO4_CD8_p2_SC


title: S344_rabbit_KO4_CD8_p2_SC


title: S345_rabbit_KO4_CD8_p2_SC


title: S361_rabbit_KO4_CD8_p2_SC


title: S341_rabbit_KO4_CD8_p2_SC


title: S343_rabbit_KO4_CD8_p2_SC


title: S339_rabbit_KO4_CD8_p2_SC


title: S335_rabbit_KO4_CD8_p2_SC


title: S337_rabbit_KO4_CD8_p2_SC


title: S338_rabbit_KO4_CD8_p2_SC


title: S336_rabbit_KO4_CD8_p2_SC


title: S334_rabbit_KO4_CD8_p2_SC


title: S376_rabbit_KO4_CD8_p2_SC


title: S333_rabbit_KO4_CD8_p2_SC


title: S342_rabbit_KO4_CD8_p2_SC


title: S330_rabbit_KO4_CD8_p2_SC


title: S332_rabbit_KO4_CD8_p2_SC


title: S331_rabbit_KO4_CD8_p2_SC


title: S327_rabbit_KO4_CD8_p2_SC


title: S328_rabbit_KO4_CD8_p2_SC


title: S329_rabbit_KO4_CD8_p2_SC


title: S326_rabbit_KO4_CD8_p2_SC


title: S347_rabbit_KO4_CD8_p2_SC


title: S323_rabbit_KO4_CD8_p2_SC


title: S321_rabbit_KO4_CD8_p2_SC


title: S320_rabbit_KO4_CD8_p2_SC


title: S322_rabbit_KO4_CD8_p2_SC


title: S340_rabbit_KO4_CD8_p2_SC


title: S319_rabbit_KO4_CD8_p2_SC


title: S316_rabbit_KO4_CD8_p2_SC


title: S317_rabbit_KO4_CD8_p2_SC


title: S318_rabbit_KO4_CD8_p2_SC


title: S314_rabbit_KO4_CD8_p2_SC


title: S315_rabbit_KO4_CD8_p2_SC


title: S313_rabbit_KO4_CD8_p2_SC


title: S312_rabbit_KO4_CD8_p2_SC


title: S309_rabbit_KO4_CD8_p2_SC


title: S307_rabbit_KO4_CD8_p2_SC


title: S310_rabbit_KO4_CD8_p2_SC


title: S325_rabbit_KO4_CD8_p2_SC


title: S308_rabbit_KO4_CD8_p2_SC


title: S324_rabbit_KO4_CD8_p2_SC


title: S305_rabbit_KO4_CD8_p2_SC


title: S302_rabbit_KO4_CD8_p2_SC


title: S301_rabbit_KO4_CD8_p2_SC


title: S303_rabbit_KO4_CD8_p2_SC


title: S304_rabbit_KO4_CD8_p2_SC


title: S300_rabbit_KO4_CD8_p2_SC


title: S299_rabbit_KO4_CD8_p2_SC


title: S297_rabbit_KO4_CD8_p2_SC


title: S296_rabbit_KO4_CD8_p2_SC


title: S293_rabbit_KO4_CD8_p2_SC


title: S294_rabbit_KO4_CD8_p2_SC


title: S292_rabbit_KO4_CD8_p2_SC


title: S291_rabbit_KO4_CD8_p2_SC


title: S289_rabbit_KO4_CD8_p2_SC


title: S288_dog_WT4_CD4_p3_SC


title: S286_dog_WT4_CD4_p3_SC


title: S290_rabbit_KO4_CD8_p2_SC


title: S311_rabbit_KO4_CD8_p2_SC


title: S287_dog_WT4_CD4_p3_SC


title: S306_rabbit_KO4_CD8_p2_SC


title: S285_dog_WT4_CD4_p3_SC


title: S298_rabbit_KO4_CD8_p2_SC


title: S282_dog_WT4_CD4_p3_SC


title: S279_dog_WT4_CD4_p3_SC


title: S281_dog_WT4_CD4_p3_SC


title: S283_dog_WT4_CD4_p3_SC


title: S277_dog_WT4_CD4_p3_Population


title: S280_dog_WT4_CD4_p3_SC


title: S284_dog_WT4_CD4_p3_SC


title: S276_dog_WT4_CD4_p3_SC


title: S271_dog_WT4_CD4_p3_SC


title: S295_rabbit_KO4_CD8_p2_SC


title: S269_dog_WT4_CD4_p3_SC


title: S272_dog_WT4_CD4_p3_SC


title: S273_dog_WT4_CD4_p3_SC


title: S275_dog_WT4_CD4_p3_SC


title: S274_dog_WT4_CD4_p3_SC


title: S268_dog_WT4_CD4_p3_SC


title: S265_dog_WT4_CD4_p3_SC


title: S264_dog_WT4_CD4_p3_SC


title: S267_dog_WT4_CD4_p3_SC


title: S263_dog_WT4_CD4_p3_SC


title: S260_dog_WT4_CD4_p3_SC


title: S258_dog_WT4_CD4_p3_SC


title: S262_dog_WT4_CD4_p3_SC


title: S257_dog_WT4_CD4_p3_SC


title: S259_dog_WT4_CD4_p3_SC


title: S256_dog_WT4_CD4_p3_SC


title: S255_dog_WT4_CD4_p3_SC


title: S253_dog_WT4_CD4_p3_SC


title: S252_dog_WT4_CD4_p3_SC


title: S251_dog_WT4_CD4_p3_SC


title: S254_dog_WT4_CD4_p3_SC


title: S250_dog_WT4_CD4_p3_SC


title: S249_dog_WT4_CD4_p3_SC


title: S248_dog_WT4_CD4_p3_SC


title: S244_dog_WT4_CD4_p3_SC


title: S247_dog_WT4_CD4_p3_SC


title: S243_dog_WT4_CD4_p3_SC


title: S246_dog_WT4_CD4_p3_SC


title: S245_dog_WT4_CD4_p3_SC


title: S241_dog_WT4_CD4_p3_SC


title: S242_dog_WT4_CD4_p3_SC


title: S239_dog_WT4_CD4_p3_SC


title: S240_dog_WT4_CD4_p3_SC


title: S238_dog_WT4_CD4_p3_SC


title: S261_dog_WT4_CD4_p3_SC


title: S234_dog_WT4_CD4_p3_SC


title: S232_dog_WT4_CD4_p3_SC


title: S235_dog_WT4_CD4_p3_SC


title: S228_dog_WT4_CD4_p3_SC


title: S231_dog_WT4_CD4_p3_SC


title: S237_dog_WT4_CD4_p3_SC


title: S225_dog_WT4_CD4_p3_SC


title: S222_dog_WT4_CD4_p3_SC


title: S230_dog_WT4_CD4_p3_SC


title: S227_dog_WT4_CD4_p3_SC


title: S226_dog_WT4_CD4_p3_SC


title: S229_dog_WT4_CD4_p3_SC


title: S233_dog_WT4_CD4_p3_SC


title: S223_dog_WT4_CD4_p3_SC


title: S236_dog_WT4_CD4_p3_SC


title: S220_dog_WT4_CD4_p3_SC


title: S219_dog_WT4_CD4_p3_SC


title: S218_dog_WT4_CD4_p3_SC


title: S224_dog_WT4_CD4_p3_SC


title: S216_dog_WT4_CD4_p3_SC


title: S221_dog_WT4_CD4_p3_SC


title: S217_dog_WT4_CD4_p3_SC


title: S215_dog_WT4_CD4_p3_SC


title: S214_dog_WT4_CD4_p3_SC


title: S270_dog_WT4_CD4_p3_SC


title: S266_dog_WT4_CD4_p3_SC


title: S210_dog_WT4_CD4_p3_SC


title: S209_dog_WT4_CD4_p3_SC


title: S208_dog_WT4_CD4_p3_SC


title: S206_dog_WT4_CD4_p3_SC


title: S211_dog_WT4_CD4_p3_SC


title: S204_dog_WT4_CD4_p3_SC


title: S202_dog_WT4_CD4_p3_SC


title: S200_dog_WT4_CD4_p3_SC


title: S199_dog_WT4_CD4_p3_SC


title: S203_dog_WT4_CD4_p3_SC


title: S196_dog_WT4_CD4_p3_SC


title: S201_dog_WT4_CD4_p3_SC


title: S192_cat_WT4_CD8_p2_SC


title: S193_dog_WT4_CD4_p3_SC


title: S194_dog_WT4_CD4_p3_SC


title: S191_cat_WT4_CD8_p2_SC


title: S197_dog_WT4_CD4_p3_SC


title: S189_cat_WT4_CD8_p2_SC


title: S195_dog_WT4_CD4_p3_SC


title: S212_dog_WT4_CD4_p3_SC


title: S184_cat_WT4_CD8_p2_SC


title: S207_dog_WT4_CD4_p3_SC


title: S183_cat_WT4_CD8_p2_SC


title: S179_cat_WT4_CD8_p2_SC


title: S190_cat_WT4_CD8_p2_SC


title: S213_dog_WT4_CD4_p3_SC


title: S181_cat_WT4_CD8_p2_Population


title: S173_cat_WT4_CD8_p2_SC


title: S186_cat_WT4_CD8_p2_SC


title: S176_cat_WT4_CD8_p2_SC


title: S188_cat_WT4_CD8_p2_SC


title: S187_cat_WT4_CD8_p2_SC


title: S170_cat_WT4_CD8_p2_SC


title: S185_cat_WT4_CD8_p2_SC


title: S174_cat_WT4_CD8_p2_SC


title: S180_cat_WT4_CD8_p2_SC


title: S172_cat_WT4_CD8_p2_SC


title: S164_cat_WT4_CD8_p2_SC


title: S163_cat_WT4_CD8_p2_SC


title: S178_cat_WT4_CD8_p2_SC


title: S175_cat_WT4_CD8_p2_SC


title: S198_dog_WT4_CD4_p3_SC


title: S166_cat_WT4_CD8_p2_SC


title: S171_cat_WT4_CD8_p2_SC


title: S168_cat_WT4_CD8_p2_SC


title: S165_cat_WT4_CD8_p2_SC


title: S167_cat_WT4_CD8_p2_SC


title: S177_cat_WT4_CD8_p2_SC


title: S160_cat_WT4_CD8_p2_SC


title: S162_cat_WT4_CD8_p2_SC


title: S159_cat_WT4_CD8_p2_SC


title: S161_cat_WT4_CD8_p2_SC


title: S158_cat_WT4_CD8_p2_SC


title: S169_cat_WT4_CD8_p2_SC


title: S156_cat_WT4_CD8_p2_SC


title: S157_cat_WT4_CD8_p2_SC


title: S155_cat_WT4_CD8_p2_SC


title: S151_cat_WT4_CD8_p2_SC


title: S154_cat_WT4_CD8_p2_SC


title: S153_cat_WT4_CD8_p2_SC


title: S149_cat_WT4_CD8_p2_SC


title: S147_cat_WT4_CD8_p2_SC


title: S152_cat_WT4_CD8_p2_SC


title: S146_cat_WT4_CD8_p2_SC


title: S150_cat_WT4_CD8_p2_SC


title: S145_cat_WT4_CD8_p2_SC


title: S143_cat_WT4_CD8_p2_SC


title: S144_cat_WT4_CD8_p2_SC


title: S140_cat_WT4_CD8_p2_SC


title: S141_cat_WT4_CD8_p2_SC


title: S138_cat_WT4_CD8_p2_SC


title: S139_cat_WT4_CD8_p2_SC


title: S136_cat_WT4_CD8_p2_SC


title: S134_cat_WT4_CD8_p2_SC


title: S137_cat_WT4_CD8_p2_SC


title: S135_cat_WT4_CD8_p2_SC


title: S133_cat_WT4_CD8_p2_SC


title: S132_cat_WT4_CD8_p2_SC


title: S131_cat_WT4_CD8_p2_SC


title: S129_cat_WT4_CD8_p2_SC


title: S128_cat_WT4_CD8_p2_SC


title: S130_cat_WT4_CD8_p2_SC


title: S148_cat_WT4_CD8_p2_SC


title: S127_cat_WT4_CD8_p2_SC


title: S123_cat_WT4_CD8_p2_SC


title: S122_cat_WT4_CD8_p2_SC


title: S125_cat_WT4_CD8_p2_SC


title: S119_cat_WT4_CD8_p2_SC


title: S120_cat_WT4_CD8_p2_SC


title: S117_cat_WT4_CD8_p2_SC


title: S124_cat_WT4_CD8_p2_SC


title: S118_cat_WT4_CD8_p2_SC


title: S116_cat_WT4_CD8_p2_SC


title: S115_cat_WT4_CD8_p2_SC


title: S142_cat_WT4_CD8_p2_SC


title: S113_cat_WT4_CD8_p2_SC


title: S112_cat_WT4_CD8_p2_SC


title: S111_cat_WT4_CD8_p2_SC


title: S110_cat_WT4_CD8_p2_SC


title: S109_cat_WT4_CD8_p2_SC


title: S108_cat_WT4_CD8_p2_SC


title: S106_cat_WT4_CD8_p2_SC


title: S105_cat_WT4_CD8_p2_SC


title: S104_cat_WT4_CD8_p2_SC


title: S126_cat_WT4_CD8_p2_SC


title: S107_cat_WT4_CD8_p2_SC


title: S102_cat_WT4_CD8_p2_SC


title: S103_cat_WT4_CD8_p2_SC


title: S100_cat_WT4_CD8_p2_SC


title: S99_cat_WT4_CD8_p2_SC


title: S98_cat_WT4_CD8_p2_SC


title: S97_cat_WT4_CD8_p2_SC


title: S121_cat_WT4_CD8_p2_SC


title: S95_bird_KO4_CD4_p2_SC


title: S101_cat_WT4_CD8_p2_SC


title: S93_bird_KO4_CD4_p2_SC


title: S90_bird_KO4_CD4_p2_SC


title: S94_bird_KO4_CD4_p2_SC


title: S114_cat_WT4_CD8_p2_SC


title: S89_bird_KO4_CD4_p2_SC


title: S87_bird_KO4_CD4_p2_SC


title: S88_bird_KO4_CD4_p2_SC


title: S85_bird_KO4_CD4_p2_Population


title: S84_bird_KO4_CD4_p2_SC


title: S83_bird_KO4_CD4_p2_SC


title: S82_bird_KO4_CD4_p2_SC


title: S80_bird_KO4_CD4_p2_SC


title: S81_bird_KO4_CD4_p2_SC


title: S79_bird_KO4_CD4_p2_SC


title: S78_bird_KO4_CD4_p2_SC


title: S74_bird_KO4_CD4_p2_SC


title: S96_bird_KO4_CD4_p2_SC


title: S73_bird_KO4_CD4_p2_SC


title: S92_bird_KO4_CD4_p2_SC


title: S70_bird_KO4_CD4_p2_SC


title: S71_bird_KO4_CD4_p2_SC


title: S91_bird_KO4_CD4_p2_SC


title: S75_bird_KO4_CD4_p2_SC


title: S72_bird_KO4_CD4_p2_SC


title: S77_bird_KO4_CD4_p2_SC


title: S76_bird_KO4_CD4_p2_SC


title: S67_bird_KO4_CD4_p2_SC


title: S66_bird_KO4_CD4_p2_SC


title: S69_bird_KO4_CD4_p2_SC


title: S68_bird_KO4_CD4_p2_SC


title: S65_bird_KO4_CD4_p2_SC


title: S62_bird_KO4_CD4_p2_SC


title: S63_bird_KO4_CD4_p2_SC


title: S61_bird_KO4_CD4_p2_SC


title: S60_bird_KO4_CD4_p2_SC


title: S56_bird_KO4_CD4_p2_SC


title: S59_bird_KO4_CD4_p2_SC


title: S58_bird_KO4_CD4_p2_SC


title: S57_bird_KO4_CD4_p2_SC


title: S52_bird_KO4_CD4_p2_SC


title: S53_bird_KO4_CD4_p2_SC


title: S51_bird_KO4_CD4_p2_SC


title: S47_bird_KO4_CD4_p2_SC


title: S43_bird_KO4_CD4_p2_SC


title: S49_bird_KO4_CD4_p2_SC


title: S45_bird_KO4_CD4_p2_SC


title: S46_bird_KO4_CD4_p2_SC


title: S48_bird_KO4_CD4_p2_SC


title: S50_bird_KO4_CD4_p2_SC


title: S37_bird_KO4_CD4_p2_SC


title: S38_bird_KO4_CD4_p2_SC


title: S42_bird_KO4_CD4_p2_SC


title: S41_bird_KO4_CD4_p2_SC


title: S35_bird_KO4_CD4_p2_SC


title: S40_bird_KO4_CD4_p2_SC


title: S34_bird_KO4_CD4_p2_SC


title: S64_bird_KO4_CD4_p2_SC


title: S36_bird_KO4_CD4_p2_SC


title: S33_bird_KO4_CD4_p2_SC


title: S55_bird_KO4_CD4_p2_SC


title: S54_bird_KO4_CD4_p2_SC


title: S32_bird_KO4_CD4_p2_SC


title: S31_bird_KO4_CD4_p2_SC


title: S29_bird_KO4_CD4_p2_SC


title: S44_bird_KO4_CD4_p2_SC


title: S26_bird_KO4_CD4_p2_SC


title: S25_bird_KO4_CD4_p2_SC


title: S39_bird_KO4_CD4_p2_SC


title: S27_bird_KO4_CD4_p2_SC


title: S205_dog_WT4_CD4_p3_SC


title: S23_bird_KO4_CD4_p2_SC


title: S22_bird_KO4_CD4_p2_SC


title: S19_bird_KO4_CD4_p2_SC


title: S18_bird_KO4_CD4_p2_SC


title: S16_bird_KO4_CD4_p2_SC


title: S15_bird_KO4_CD4_p2_SC


title: S12_bird_KO4_CD4_p2_SC


title: S13_bird_KO4_CD4_p2_SC


title: S11_bird_KO4_CD4_p2_SC


title: S14_bird_KO4_CD4_p2_SC


title: S10_bird_KO4_CD4_p2_SC


title: S8_bird_KO4_CD4_p2_SC


title: S28_bird_KO4_CD4_p2_SC


title: S7_bird_KO4_CD4_p2_SC


title: S5_bird_KO4_CD4_p2_SC


title: S30_bird_KO4_CD4_p2_SC


title: S6_bird_KO4_CD4_p2_SC


title: S4_bird_KO4_CD4_p2_SC


title: S3_bird_KO4_CD4_p2_SC


title: S2_bird_KO4_CD4_p2_SC


title: S24_bird_KO4_CD4_p2_SC


title: S20_bird_KO4_CD4_p2_SC


title: S17_bird_KO4_CD4_p2_SC


title: S380_rabbit_WT4_CD4_p2_SC

description: R3_rsem.genes.counts.matrix.TMM_normalized.FPKM


title: S377_rabbit_WT4_CD4_p2_SC


title: S378_rabbit_WT4_CD4_p2_SC


title: S383_rabbit_WT4_CD4_p2_SC


title: S384_rabbit_WT4_CD4_p2_SC


title: S382_rabbit_WT4_CD4_p2_SC


title: S376_rabbit_WT4_CD4_p2_SC


title: S381_rabbit_WT4_CD4_p2_SC


title: S379_rabbit_WT4_CD4_p2_SC


title: S21_bird_KO4_CD4_p2_SC


title: S366_rabbit_WT4_CD4_p2_SC


title: S372_rabbit_WT4_CD4_p2_SC


title: S369_rabbit_WT4_CD4_p2_SC


title: S368_rabbit_WT4_CD4_p2_SC


title: S1_bird_KO4_CD4_p2_SC


title: S365_rabbit_WT4_CD4_p2_SC


title: S364_rabbit_WT4_CD4_p2_SC


title: S363_rabbit_WT4_CD4_p2_SC


title: S371_rabbit_WT4_CD4_p2_SC


title: S9_bird_KO4_CD4_p2_SC


title: S373_rabbit_WT4_CD4_p2_Population


title: S362_rabbit_WT4_CD4_p2_SC


title: S360_rabbit_WT4_CD4_p2_SC


title: S358_rabbit_WT4_CD4_p2_SC


title: S359_rabbit_WT4_CD4_p2_SC


title: S357_rabbit_WT4_CD4_p2_SC


title: S375_rabbit_WT4_CD4_p2_SC


title: S370_rabbit_WT4_CD4_p2_SC


title: S356_rabbit_WT4_CD4_p2_SC


title: S355_rabbit_WT4_CD4_p2_SC


title: S352_rabbit_WT4_CD4_p2_SC


title: S353_rabbit_WT4_CD4_p2_SC


title: S354_rabbit_WT4_CD4_p2_SC


title: S367_rabbit_WT4_CD4_p2_SC


title: S350_rabbit_WT4_CD4_p2_SC


title: S338_rabbit_WT4_CD4_p2_SC


title: S348_rabbit_WT4_CD4_p2_SC


title: S347_rabbit_WT4_CD4_p2_SC


title: S339_rabbit_WT4_CD4_p2_SC


title: S341_rabbit_WT4_CD4_p2_SC


title: S344_rabbit_WT4_CD4_p2_SC


title: S343_rabbit_WT4_CD4_p2_SC


title: S346_rabbit_WT4_CD4_p2_SC


title: S349_rabbit_WT4_CD4_p2_SC


title: S337_rabbit_WT4_CD4_p2_SC


title: S332_rabbit_WT4_CD4_p2_SC


title: S342_rabbit_WT4_CD4_p2_SC


title: S345_rabbit_WT4_CD4_p2_SC


title: S340_rabbit_WT4_CD4_p2_SC


title: S361_rabbit_WT4_CD4_p2_SC


title: S329_rabbit_WT4_CD4_p2_SC


title: S330_rabbit_WT4_CD4_p2_SC


title: S331_rabbit_WT4_CD4_p2_SC


title: S351_rabbit_WT4_CD4_p2_SC


title: S328_rabbit_WT4_CD4_p2_SC


title: S326_rabbit_WT4_CD4_p2_SC


title: S334_rabbit_WT4_CD4_p2_SC


title: S333_rabbit_WT4_CD4_p2_SC


title: S324_rabbit_WT4_CD4_p2_SC


title: S323_rabbit_WT4_CD4_p2_SC


title: S327_rabbit_WT4_CD4_p2_SC


title: S325_rabbit_WT4_CD4_p2_SC


title: S335_rabbit_WT4_CD4_p2_SC


title: S336_rabbit_WT4_CD4_p2_SC


title: S320_rabbit_WT4_CD4_p2_SC


title: S321_rabbit_WT4_CD4_p2_SC


title: S322_rabbit_WT4_CD4_p2_SC


title: S314_rabbit_WT4_CD4_p2_SC


title: S318_rabbit_WT4_CD4_p2_SC


title: S319_rabbit_WT4_CD4_p2_SC


title: S316_rabbit_WT4_CD4_p2_SC


title: S317_rabbit_WT4_CD4_p2_SC


title: S315_rabbit_WT4_CD4_p2_SC


title: S311_rabbit_WT4_CD4_p2_SC


title: S304_rabbit_WT4_CD4_p2_SC


title: S305_rabbit_WT4_CD4_p2_SC


title: S310_rabbit_WT4_CD4_p2_SC


title: S312_rabbit_WT4_CD4_p2_SC


title: S308_rabbit_WT4_CD4_p2_SC


title: S313_rabbit_WT4_CD4_p2_SC


title: S302_rabbit_WT4_CD4_p2_SC


title: S303_rabbit_WT4_CD4_p2_SC


title: S306_rabbit_WT4_CD4_p2_SC


title: S309_rabbit_WT4_CD4_p2_SC


title: S300_rabbit_WT4_CD4_p2_SC


title: S301_rabbit_WT4_CD4_p2_SC


title: S307_rabbit_WT4_CD4_p2_SC


title: S295_rabbit_WT4_CD4_p2_SC


title: S299_rabbit_WT4_CD4_p2_SC


title: S294_rabbit_WT4_CD4_p2_SC


title: S298_rabbit_WT4_CD4_p2_SC


title: S297_rabbit_WT4_CD4_p2_SC


title: S296_rabbit_WT4_CD4_p2_SC


title: S293_rabbit_WT4_CD4_p2_SC


title: S292_rabbit_WT4_CD4_p2_SC


title: S291_rabbit_WT4_CD4_p2_SC


title: S290_rabbit_WT4_CD4_p2_SC


title: S289_rabbit_WT4_CD4_p2_SC


title: S288_dog_KO4_CD8_p1_SC


title: S286_dog_KO4_CD8_p1_SC


title: S285_dog_KO4_CD8_p1_SC


title: S284_dog_KO4_CD8_p1_SC


title: S287_dog_KO4_CD8_p1_SC


title: S276_dog_KO4_CD8_p1_SC


title: S277_dog_KO4_CD8_p1_Population


title: S282_dog_KO4_CD8_p1_SC


title: S281_dog_KO4_CD8_p1_SC


title: S274_dog_KO4_CD8_p1_SC


title: S280_dog_KO4_CD8_p1_SC


title: S283_dog_KO4_CD8_p1_SC


title: S270_dog_KO4_CD8_p1_SC


title: S271_dog_KO4_CD8_p1_SC


title: S279_dog_KO4_CD8_p1_SC


title: S273_dog_KO4_CD8_p1_SC


title: S267_dog_KO4_CD8_p1_SC


title: S269_dog_KO4_CD8_p1_SC


title: S268_dog_KO4_CD8_p1_SC


title: S266_dog_KO4_CD8_p1_SC


title: S265_dog_KO4_CD8_p1_SC


title: S264_dog_KO4_CD8_p1_SC


title: S263_dog_KO4_CD8_p1_SC


title: S261_dog_KO4_CD8_p1_SC


title: S262_dog_KO4_CD8_p1_SC


title: S260_dog_KO4_CD8_p1_SC


title: S259_dog_KO4_CD8_p1_SC


title: S258_dog_KO4_CD8_p1_SC


title: S257_dog_KO4_CD8_p1_SC


title: S275_dog_KO4_CD8_p1_SC


title: S256_dog_KO4_CD8_p1_SC


title: S255_dog_KO4_CD8_p1_SC


title: S253_dog_KO4_CD8_p1_SC


title: S272_dog_KO4_CD8_p1_SC


title: S252_dog_KO4_CD8_p1_SC


title: S251_dog_KO4_CD8_p1_SC


title: S247_dog_KO4_CD8_p1_SC


title: S250_dog_KO4_CD8_p1_SC


title: S243_dog_KO4_CD8_p1_SC


title: S249_dog_KO4_CD8_p1_SC


title: S244_dog_KO4_CD8_p1_SC


title: S246_dog_KO4_CD8_p1_SC


title: S241_dog_KO4_CD8_p1_SC


title: S242_dog_KO4_CD8_p1_SC


title: S239_dog_KO4_CD8_p1_SC


title: S238_dog_KO4_CD8_p1_SC


title: S236_dog_KO4_CD8_p1_SC


title: S237_dog_KO4_CD8_p1_SC


title: S240_dog_KO4_CD8_p1_SC


title: S235_dog_KO4_CD8_p1_SC


title: S234_dog_KO4_CD8_p1_SC


title: S233_dog_KO4_CD8_p1_SC


title: S232_dog_KO4_CD8_p1_SC


title: S254_dog_KO4_CD8_p1_SC


title: S231_dog_KO4_CD8_p1_SC


title: S229_dog_KO4_CD8_p1_SC


title: S230_dog_KO4_CD8_p1_SC


title: S227_dog_KO4_CD8_p1_SC


title: S248_dog_KO4_CD8_p1_SC


title: S228_dog_KO4_CD8_p1_SC


title: S226_dog_KO4_CD8_p1_SC


title: S225_dog_KO4_CD8_p1_SC


title: S223_dog_KO4_CD8_p1_SC


title: S245_dog_KO4_CD8_p1_SC


title: S222_dog_KO4_CD8_p1_SC


title: S221_dog_KO4_CD8_p1_SC


title: S224_dog_KO4_CD8_p1_SC


title: S220_dog_KO4_CD8_p1_SC


title: S218_dog_KO4_CD8_p1_SC


title: S217_dog_KO4_CD8_p1_SC


title: S216_dog_KO4_CD8_p1_SC


title: S212_dog_KO4_CD8_p1_SC


title: S213_dog_KO4_CD8_p1_SC


title: S219_dog_KO4_CD8_p1_SC


title: S210_dog_KO4_CD8_p1_SC


title: S211_dog_KO4_CD8_p1_SC


title: S215_dog_KO4_CD8_p1_SC


title: S208_dog_KO4_CD8_p1_SC


title: S209_dog_KO4_CD8_p1_SC


title: S206_dog_KO4_CD8_p1_SC


title: S205_dog_KO4_CD8_p1_SC


title: S203_dog_KO4_CD8_p1_SC


title: S201_dog_KO4_CD8_p1_SC


title: S199_dog_KO4_CD8_p1_SC


title: S200_dog_KO4_CD8_p1_SC


title: S204_dog_KO4_CD8_p1_SC


title: S202_dog_KO4_CD8_p1_SC


title: S198_dog_KO4_CD8_p1_SC


title: S195_dog_KO4_CD8_p1_SC


title: S191_cat_KO4_CD4_p1_SC


title: S196_dog_KO4_CD8_p1_SC


title: S214_dog_KO4_CD8_p1_SC


title: S194_dog_KO4_CD8_p1_SC


title: S190_cat_KO4_CD4_p1_SC


title: S188_cat_KO4_CD4_p1_SC


title: S189_cat_KO4_CD4_p1_SC


title: S193_dog_KO4_CD8_p1_SC


title: S187_cat_KO4_CD4_p1_SC


title: S192_cat_KO4_CD4_p1_SC


title: S181_cat_KO4_CD4_p1_Population


title: S180_cat_KO4_CD4_p1_SC


title: S207_dog_KO4_CD8_p1_SC


title: S179_cat_KO4_CD4_p1_SC


title: S186_cat_KO4_CD4_p1_SC


title: S184_cat_KO4_CD4_p1_SC


title: S178_cat_KO4_CD4_p1_SC


title: S185_cat_KO4_CD4_p1_SC


title: S183_cat_KO4_CD4_p1_SC


title: S177_cat_KO4_CD4_p1_SC


title: S197_dog_KO4_CD8_p1_SC


title: S174_cat_KO4_CD4_p1_SC


title: S173_cat_KO4_CD4_p1_SC


title: S170_cat_KO4_CD4_p1_SC


title: S172_cat_KO4_CD4_p1_SC


title: S171_cat_KO4_CD4_p1_SC


title: S169_cat_KO4_CD4_p1_SC


title: S167_cat_KO4_CD4_p1_SC


title: S166_cat_KO4_CD4_p1_SC


title: S162_cat_KO4_CD4_p1_SC


title: S165_cat_KO4_CD4_p1_SC


title: S160_cat_KO4_CD4_p1_SC


title: S158_cat_KO4_CD4_p1_SC


title: S159_cat_KO4_CD4_p1_SC


title: S164_cat_KO4_CD4_p1_SC


title: S163_cat_KO4_CD4_p1_SC


title: S156_cat_KO4_CD4_p1_SC


title: S155_cat_KO4_CD4_p1_SC


title: S157_cat_KO4_CD4_p1_SC


title: S176_cat_KO4_CD4_p1_SC


title: S153_cat_KO4_CD4_p1_SC


title: S151_cat_KO4_CD4_p1_SC


title: S152_cat_KO4_CD4_p1_SC


title: S150_cat_KO4_CD4_p1_SC


title: S175_cat_KO4_CD4_p1_SC


title: S148_cat_KO4_CD4_p1_SC


title: S147_cat_KO4_CD4_p1_SC


title: S146_cat_KO4_CD4_p1_SC


title: S168_cat_KO4_CD4_p1_SC


title: S144_cat_KO4_CD4_p1_SC


title: S145_cat_KO4_CD4_p1_SC


title: S143_cat_KO4_CD4_p1_SC


title: S141_cat_KO4_CD4_p1_SC


title: S142_cat_KO4_CD4_p1_SC


title: S161_cat_KO4_CD4_p1_SC


title: S140_cat_KO4_CD4_p1_SC


title: S138_cat_KO4_CD4_p1_SC


title: S137_cat_KO4_CD4_p1_SC


title: S136_cat_KO4_CD4_p1_SC


title: S139_cat_KO4_CD4_p1_SC


title: S135_cat_KO4_CD4_p1_SC


title: S154_cat_KO4_CD4_p1_SC


title: S132_cat_KO4_CD4_p1_SC


title: S133_cat_KO4_CD4_p1_SC


title: S134_cat_KO4_CD4_p1_SC


title: S149_cat_KO4_CD4_p1_SC


title: S131_cat_KO4_CD4_p1_SC


title: S130_cat_KO4_CD4_p1_SC


title: S124_cat_KO4_CD4_p1_SC


title: S126_cat_KO4_CD4_p1_SC


title: S129_cat_KO4_CD4_p1_SC


title: S128_cat_KO4_CD4_p1_SC


title: S125_cat_KO4_CD4_p1_SC


title: S127_cat_KO4_CD4_p1_SC


title: S123_cat_KO4_CD4_p1_SC


title: S122_cat_KO4_CD4_p1_SC


title: S121_cat_KO4_CD4_p1_SC


title: S119_cat_KO4_CD4_p1_SC


title: S117_cat_KO4_CD4_p1_SC


title: S115_cat_KO4_CD4_p1_SC


title: S114_cat_KO4_CD4_p1_SC


title: S109_cat_KO4_CD4_p1_SC


title: S110_cat_KO4_CD4_p1_SC


title: S107_cat_KO4_CD4_p1_SC


title: S106_cat_KO4_CD4_p1_SC


title: S112_cat_KO4_CD4_p1_SC


title: S104_cat_KO4_CD4_p1_SC


title: S113_cat_KO4_CD4_p1_SC


title: S102_cat_KO4_CD4_p1_SC


title: S100_cat_KO4_CD4_p1_SC


title: S98_cat_KO4_CD4_p1_SC


title: S97_cat_KO4_CD4_p1_SC


title: S101_cat_KO4_CD4_p1_SC


title: S96_bird_WT4_CD8_p1_SC


title: S105_cat_KO4_CD4_p1_SC


title: S103_cat_KO4_CD4_p1_SC


title: S120_cat_KO4_CD4_p1_SC


title: S95_bird_WT4_CD8_p1_SC


title: S118_cat_KO4_CD4_p1_SC


title: S116_cat_KO4_CD4_p1_SC


title: S92_bird_WT4_CD8_p1_SC


title: S93_bird_WT4_CD8_p1_SC


title: S94_bird_WT4_CD8_p1_SC


title: S89_bird_WT4_CD8_p1_SC


title: S91_bird_WT4_CD8_p1_SC


title: S90_bird_WT4_CD8_p1_SC


title: S88_bird_WT4_CD8_p1_SC


title: S87_bird_WT4_CD8_p1_SC


title: S111_cat_KO4_CD4_p1_SC


title: S108_cat_KO4_CD4_p1_SC


title: S84_bird_WT4_CD8_p1_SC


title: S83_bird_WT4_CD8_p1_SC


title: S82_bird_WT4_CD8_p1_SC


title: S81_bird_WT4_CD8_p1_SC


title: S99_cat_KO4_CD4_p1_SC


title: S79_bird_WT4_CD8_p1_SC


title: S80_bird_WT4_CD8_p1_SC


title: S78_bird_WT4_CD8_p1_SC


title: S77_bird_WT4_CD8_p1_SC


title: S76_bird_WT4_CD8_p1_SC


title: S73_bird_WT4_CD8_p1_SC


title: S68_bird_WT4_CD8_p1_SC


title: S69_bird_WT4_CD8_p1_SC


title: S67_bird_WT4_CD8_p1_SC


title: S65_bird_WT4_CD8_p1_SC


title: S70_bird_WT4_CD8_p1_SC


title: S63_bird_WT4_CD8_p1_SC


title: S66_bird_WT4_CD8_p1_SC


title: S64_bird_WT4_CD8_p1_SC


title: S57_bird_WT4_CD8_p1_SC


title: S61_bird_WT4_CD8_p1_SC


title: S62_bird_WT4_CD8_p1_SC


title: S59_bird_WT4_CD8_p1_SC


title: S60_bird_WT4_CD8_p1_SC


title: S58_bird_WT4_CD8_p1_SC


title: S56_bird_WT4_CD8_p1_SC


title: S54_bird_WT4_CD8_p1_SC


title: S85_bird_WT4_CD8_p1_Population


title: S52_bird_WT4_CD8_p1_SC


title: S72_bird_WT4_CD8_p1_SC


title: S74_bird_WT4_CD8_p1_SC


title: S53_bird_WT4_CD8_p1_SC


title: S49_bird_WT4_CD8_p1_SC


title: S71_bird_WT4_CD8_p1_SC


title: S48_bird_WT4_CD8_p1_SC


title: S50_bird_WT4_CD8_p1_SC


title: S46_bird_WT4_CD8_p1_SC


title: S75_bird_WT4_CD8_p1_SC


title: S47_bird_WT4_CD8_p1_SC


title: S40_bird_WT4_CD8_p1_SC


title: S39_bird_WT4_CD8_p1_SC


title: S41_bird_WT4_CD8_p1_SC


title: S45_bird_WT4_CD8_p1_SC


title: S43_bird_WT4_CD8_p1_SC


title: S42_bird_WT4_CD8_p1_SC


title: S38_bird_WT4_CD8_p1_SC


title: S37_bird_WT4_CD8_p1_SC


title: S55_bird_WT4_CD8_p1_SC


title: S51_bird_WT4_CD8_p1_SC


title: S33_bird_WT4_CD8_p1_SC


title: S32_bird_WT4_CD8_p1_SC


title: S36_bird_WT4_CD8_p1_SC


title: S31_bird_WT4_CD8_p1_SC


title: S35_bird_WT4_CD8_p1_SC


title: S34_bird_WT4_CD8_p1_SC


title: S30_bird_WT4_CD8_p1_SC


title: S29_bird_WT4_CD8_p1_SC


title: S25_bird_WT4_CD8_p1_SC


title: S24_bird_WT4_CD8_p1_SC


title: S26_bird_WT4_CD8_p1_SC


title: S28_bird_WT4_CD8_p1_SC


title: S27_bird_WT4_CD8_p1_SC


title: S22_bird_WT4_CD8_p1_SC


title: S19_bird_WT4_CD8_p1_SC


title: S20_bird_WT4_CD8_p1_SC


title: S21_bird_WT4_CD8_p1_SC


title: S44_bird_WT4_CD8_p1_SC


title: S23_bird_WT4_CD8_p1_SC


title: S9_bird_WT4_CD8_p1_SC


title: S12_bird_WT4_CD8_p1_SC


title: S8_bird_WT4_CD8_p1_SC


title: S17_bird_WT4_CD8_p1_SC


title: S14_bird_WT4_CD8_p1_SC


title: S15_bird_WT4_CD8_p1_SC


title: S7_bird_WT4_CD8_p1_SC


title: S13_bird_WT4_CD8_p1_SC


title: S5_bird_WT4_CD8_p1_SC


title: S6_bird_WT4_CD8_p1_SC


title: S4_bird_WT4_CD8_p1_SC


title: S2_bird_WT4_CD8_p1_SC


title: S1_bird_WT4_CD8_p1_SC


title: S3_bird_WT4_CD8_p1_SC


title: S10_bird_WT4_CD8_p1_SC


title: S18_bird_WT4_CD8_p1_SC


title: S16_bird_WT4_CD8_p1_SC


title: S11_bird_WT4_CD8_p1_SC


title: S370_rabbit_KO3_CD4_p2

description:
Single cell RNAseq
R2_rsem.genes.counts.matrix.TMM_normalized.FPKM

extract_protocol:
5 ?l lysis buffer comprised of Buffer TCL (Qiagen) plus 1% 2-mercaptoethanol.
Plates were then spun down for one minute at 3000rpm and immediately frozen at -80?C. Cells were thawed and RNA was isolated with 2.2x RNAClean SPRI beads (Beckman Coulter Genomics) without final elution. The beads were then air-dried and processed immediately for cDNA synthesis. Samples were then processed using the Smart-seq2 protocol. This was followed by making a 25?l reaction mix for each PCR and performing 21 cycles for cDNA amplification. Then 0.25 ng cDNA from each cell and ? of the standard Illumina NexteraXT reaction volume were used in both the tagmentation and final PCR amplification steps


title: S371_rabbit_KO3_CD4_p2


title: S383_rabbit_KO3_CD4_p2


title: S382_rabbit_KO3_CD4_p2


title: S379_rabbit_KO3_CD4_p2


title: S384_rabbit_KO3_CD4_p2


title: S378_rabbit_KO3_CD4_p2


title: S375_rabbit_KO3_CD4_p2


title: S381_rabbit_KO3_CD4_p2


title: S376_rabbit_KO3_CD4_p2


title: S380_rabbit_KO3_CD4_p2


title: S377_rabbit_KO3_CD4_p2


title: S372_rabbit_KO3_CD4_p2


title: S369_rabbit_KO3_CD4_p2


title: S367_rabbit_KO3_CD4_p2


title: S368_rabbit_KO3_CD4_p2


title: S365_rabbit_KO3_CD4_p2


title: S362_rabbit_KO3_CD4_p2


title: S366_rabbit_KO3_CD4_p2


title: S363_rabbit_KO3_CD4_p2


title: S364_rabbit_KO3_CD4_p2


title: S361_rabbit_KO3_CD4_p2


title: S360_rabbit_KO3_CD4_p2


title: S359_rabbit_KO3_CD4_p2


title: S357_rabbit_KO3_CD4_p2


title: S358_rabbit_KO3_CD4_p2


title: S356_rabbit_KO3_CD4_p2


title: S355_rabbit_KO3_CD4_p2


title: S354_rabbit_KO3_CD4_p2


title: S353_rabbit_KO3_CD4_p2


title: S352_rabbit_KO3_CD4_p2


title: S351_rabbit_KO3_CD4_p2


title: S345_rabbit_KO3_CD4_p2


title: S347_rabbit_KO3_CD4_p2


title: S348_rabbit_KO3_CD4_p2


title: S349_rabbit_KO3_CD4_p2


title: S341_rabbit_KO3_CD4_p2


title: S340_rabbit_KO3_CD4_p2


title: S337_rabbit_KO3_CD4_p2


title: S334_rabbit_KO3_CD4_p2


title: S338_rabbit_KO3_CD4_p2


title: S336_rabbit_KO3_CD4_p2


title: S335_rabbit_KO3_CD4_p2


title: S339_rabbit_KO3_CD4_p2


title: S343_rabbit_KO3_CD4_p2


title: S344_rabbit_KO3_CD4_p2


title: S350_rabbit_KO3_CD4_p2


title: S332_rabbit_KO3_CD4_p2


title: S330_rabbit_KO3_CD4_p2


title: S342_rabbit_KO3_CD4_p2


title: S329_rabbit_KO3_CD4_p2


title: S325_rabbit_KO3_CD4_p2


title: S333_rabbit_KO3_CD4_p2


title: S324_rabbit_KO3_CD4_p2


title: S326_rabbit_KO3_CD4_p2


title: S328_rabbit_KO3_CD4_p2


title: S323_rabbit_KO3_CD4_p2


title: S322_rabbit_KO3_CD4_p2


title: S327_rabbit_KO3_CD4_p2


title: S331_rabbit_KO3_CD4_p2


title: S321_rabbit_KO3_CD4_p2


title: S320_rabbit_KO3_CD4_p2


title: S319_rabbit_KO3_CD4_p2


title: S318_rabbit_KO3_CD4_p2


title: S314_rabbit_KO3_CD4_p2


title: S317_rabbit_KO3_CD4_p2


title: S309_rabbit_KO3_CD4_p2


title: S303_rabbit_KO3_CD4_p2


title: S310_rabbit_KO3_CD4_p2


title: S308_rabbit_KO3_CD4_p2


title: S302_rabbit_KO3_CD4_p2


title: S316_rabbit_KO3_CD4_p2


title: S311_rabbit_KO3_CD4_p2


title: S312_rabbit_KO3_CD4_p2


title: S315_rabbit_KO3_CD4_p2


title: S300_rabbit_KO3_CD4_p2


title: S299_rabbit_KO3_CD4_p2


title: S307_rabbit_KO3_CD4_p2


title: S306_rabbit_KO3_CD4_p2


title: S304_rabbit_KO3_CD4_p2


title: S295_rabbit_KO3_CD4_p2


title: S293_rabbit_KO3_CD4_p2


title: S294_rabbit_KO3_CD4_p2


title: S298_rabbit_KO3_CD4_p2


title: S301_rabbit_KO3_CD4_p2


title: S297_rabbit_KO3_CD4_p2


title: S292_rabbit_KO3_CD4_p2


title: S313_rabbit_KO3_CD4_p2


title: S291_rabbit_KO3_CD4_p2


title: S290_rabbit_KO3_CD4_p2


title: S305_rabbit_KO3_CD4_p2


title: S288_dog_WT3_CD8_p1


title: S289_rabbit_KO3_CD4_p2


title: S296_rabbit_KO3_CD4_p2


title: S282_dog_WT3_CD8_p1


title: S285_dog_WT3_CD8_p1


title: S284_dog_WT3_CD8_p1


title: S286_dog_WT3_CD8_p1


title: S275_dog_WT3_CD8_p1


title: S274_dog_WT3_CD8_p1


title: S287_dog_WT3_CD8_p1


title: S272_dog_WT3_CD8_p1


title: S283_dog_WT3_CD8_p1


title: S269_dog_WT3_CD8_p1


title: S268_dog_WT3_CD8_p1


title: S267_dog_WT3_CD8_p1


title: S280_dog_WT3_CD8_p1


title: S266_dog_WT3_CD8_p1


title: S279_dog_WT3_CD8_p1


title: S270_dog_WT3_CD8_p1


title: S273_dog_WT3_CD8_p1


title: S276_dog_WT3_CD8_p1


title: S264_dog_WT3_CD8_p1


title: S263_dog_WT3_CD8_p1


title: S261_dog_WT3_CD8_p1


title: S262_dog_WT3_CD8_p1


title: S260_dog_WT3_CD8_p1


title: S281_dog_WT3_CD8_p1


title: S259_dog_WT3_CD8_p1


title: S271_dog_WT3_CD8_p1


title: S254_dog_WT3_CD8_p1


title: S255_dog_WT3_CD8_p1


title: S256_dog_WT3_CD8_p1


title: S253_dog_WT3_CD8_p1


title: S252_dog_WT3_CD8_p1


title: S250_dog_WT3_CD8_p1


title: S251_dog_WT3_CD8_p1


title: S258_dog_WT3_CD8_p1


title: S248_dog_WT3_CD8_p1


title: S249_dog_WT3_CD8_p1


title: S265_dog_WT3_CD8_p1


title: S246_dog_WT3_CD8_p1


title: S244_dog_WT3_CD8_p1


title: S243_dog_WT3_CD8_p1


title: S247_dog_WT3_CD8_p1


title: S239_dog_WT3_CD8_p1


title: S241_dog_WT3_CD8_p1


title: S240_dog_WT3_CD8_p1


title: S242_dog_WT3_CD8_p1


title: S237_dog_WT3_CD8_p1


title: S238_dog_WT3_CD8_p1


title: S236_dog_WT3_CD8_p1


title: S235_dog_WT3_CD8_p1


title: S257_dog_WT3_CD8_p1


title: S234_dog_WT3_CD8_p1


title: S232_dog_WT3_CD8_p1


title: S233_dog_WT3_CD8_p1


title: S231_dog_WT3_CD8_p1


title: S228_dog_WT3_CD8_p1


title: S227_dog_WT3_CD8_p1


title: S229_dog_WT3_CD8_p1


title: S226_dog_WT3_CD8_p1


title: S225_dog_WT3_CD8_p1


title: S222_dog_WT3_CD8_p1


title: S223_dog_WT3_CD8_p1


title: S224_dog_WT3_CD8_p1


title: S230_dog_WT3_CD8_p1


title: S221_dog_WT3_CD8_p1


title: S220_dog_WT3_CD8_p1


title: S245_dog_WT3_CD8_p1


title: S219_dog_WT3_CD8_p1


title: S218_dog_WT3_CD8_p1


title: S212_dog_WT3_CD8_p1


title: S215_dog_WT3_CD8_p1


title: S211_dog_WT3_CD8_p1


title: S216_dog_WT3_CD8_p1


title: S217_dog_WT3_CD8_p1


title: S214_dog_WT3_CD8_p1


title: S208_dog_WT3_CD8_p1


title: S207_dog_WT3_CD8_p1


title: S206_dog_WT3_CD8_p1


title: S205_dog_WT3_CD8_p1


title: S202_dog_WT3_CD8_p1


title: S203_dog_WT3_CD8_p1


title: S201_dog_WT3_CD8_p1


title: S199_dog_WT3_CD8_p1


title: S200_dog_WT3_CD8_p1


title: S198_dog_WT3_CD8_p1


title: S195_dog_WT3_CD8_p1


title: S196_dog_WT3_CD8_p1


title: S193_dog_WT3_CD8_p1


title: S194_dog_WT3_CD8_p1


title: S197_dog_WT3_CD8_p1


title: S213_dog_WT3_CD8_p1


title: S191_cat_WT3_CD4_p2


title: S189_cat_WT3_CD4_p2


title: S192_cat_WT3_CD4_p2


title: S190_cat_WT3_CD4_p2


title: S187_cat_WT3_CD4_p2


title: S209_dog_WT3_CD8_p1


title: S183_cat_WT3_CD4_p2


title: S210_dog_WT3_CD8_p1


title: S180_cat_WT3_CD4_p2


title: S204_dog_WT3_CD8_p1


title: S188_cat_WT3_CD4_p2


title: S178_cat_WT3_CD4_p2


title: S185_cat_WT3_CD4_p2


title: S177_cat_WT3_CD4_p2


title: S179_cat_WT3_CD4_p2


title: S175_cat_WT3_CD4_p2


title: S176_cat_WT3_CD4_p2


title: S174_cat_WT3_CD4_p2


title: S169_cat_WT3_CD4_p2


title: S168_cat_WT3_CD4_p2


title: S167_cat_WT3_CD4_p2


title: S186_cat_WT3_CD4_p2


title: S165_cat_WT3_CD4_p2


title: S184_cat_WT3_CD4_p2


title: S171_cat_WT3_CD4_p2


title: S173_cat_WT3_CD4_p2


title: S164_cat_WT3_CD4_p2


title: S163_cat_WT3_CD4_p2


title: S162_cat_WT3_CD4_p2


title: S160_cat_WT3_CD4_p2


title: S161_cat_WT3_CD4_p2


title: S156_cat_WT3_CD4_p2


title: S158_cat_WT3_CD4_p2


title: S154_cat_WT3_CD4_p2


title: S157_cat_WT3_CD4_p2


title: S153_cat_WT3_CD4_p2


title: S151_cat_WT3_CD4_p2


title: S152_cat_WT3_CD4_p2


title: S149_cat_WT3_CD4_p2


title: S150_cat_WT3_CD4_p2


title: S172_cat_WT3_CD4_p2


title: S147_cat_WT3_CD4_p2


title: S148_cat_WT3_CD4_p2


title: S170_cat_WT3_CD4_p2


title: S146_cat_WT3_CD4_p2


title: S166_cat_WT3_CD4_p2


title: S159_cat_WT3_CD4_p2


title: S141_cat_WT3_CD4_p2


title: S138_cat_WT3_CD4_p2


title: S142_cat_WT3_CD4_p2


title: S144_cat_WT3_CD4_p2


title: S140_cat_WT3_CD4_p2


title: S143_cat_WT3_CD4_p2


title: S139_cat_WT3_CD4_p2


title: S155_cat_WT3_CD4_p2


title: S133_cat_WT3_CD4_p2


title: S137_cat_WT3_CD4_p2


title: S135_cat_WT3_CD4_p2


title: S134_cat_WT3_CD4_p2


title: S136_cat_WT3_CD4_p2


title: S132_cat_WT3_CD4_p2


title: S128_cat_WT3_CD4_p2


title: S130_cat_WT3_CD4_p2


title: S125_cat_WT3_CD4_p2


title: S124_cat_WT3_CD4_p2


title: S129_cat_WT3_CD4_p2


title: S127_cat_WT3_CD4_p2


title: S131_cat_WT3_CD4_p2


title: S122_cat_WT3_CD4_p2


title: S121_cat_WT3_CD4_p2


title: S120_cat_WT3_CD4_p2


title: S145_cat_WT3_CD4_p2


title: S118_cat_WT3_CD4_p2


title: S123_cat_WT3_CD4_p2


title: S117_cat_WT3_CD4_p2


title: S115_cat_WT3_CD4_p2


title: S109_cat_WT3_CD4_p2


title: S112_cat_WT3_CD4_p2


title: S107_cat_WT3_CD4_p2


title: S110_cat_WT3_CD4_p2


title: S111_cat_WT3_CD4_p2


title: S106_cat_WT3_CD4_p2


title: S114_cat_WT3_CD4_p2


title: S126_cat_WT3_CD4_p2


title: S105_cat_WT3_CD4_p2


title: S98_cat_WT3_CD4_p2


title: S99_cat_WT3_CD4_p2


title: S97_cat_WT3_CD4_p2


title: S103_cat_WT3_CD4_p2


title: S102_cat_WT3_CD4_p2


title: S100_cat_WT3_CD4_p2


title: S95_bird_KO3_CD8_p1


title: S94_bird_KO3_CD8_p1


title: S119_cat_WT3_CD4_p2


title: S96_bird_KO3_CD8_p1


title: S92_bird_KO3_CD8_p1


title: S101_cat_WT3_CD4_p2


title: S90_bird_KO3_CD8_p1


title: S88_bird_KO3_CD8_p1


title: S93_bird_KO3_CD8_p1


title: S116_cat_WT3_CD4_p2


title: S113_cat_WT3_CD4_p2


title: S108_cat_WT3_CD4_p2


title: S104_cat_WT3_CD4_p2


title: S84_bird_KO3_CD8_p1


title: S77_bird_KO3_CD8_p1


title: S78_bird_KO3_CD8_p1


title: S79_bird_KO3_CD8_p1


title: S81_bird_KO3_CD8_p1


title: S80_bird_KO3_CD8_p1


title: S82_bird_KO3_CD8_p1


title: S75_bird_KO3_CD8_p1


title: S76_bird_KO3_CD8_p1


title: S74_bird_KO3_CD8_p1


title: S72_bird_KO3_CD8_p1


title: S68_bird_KO3_CD8_p1


title: S70_bird_KO3_CD8_p1


title: S67_bird_KO3_CD8_p1


title: S66_bird_KO3_CD8_p1


title: S65_bird_KO3_CD8_p1


title: S58_bird_KO3_CD8_p1


title: S63_bird_KO3_CD8_p1


title: S60_bird_KO3_CD8_p1


title: S64_bird_KO3_CD8_p1


title: S59_bird_KO3_CD8_p1


title: S61_bird_KO3_CD8_p1


title: S56_bird_KO3_CD8_p1


title: S83_bird_KO3_CD8_p1


title: S55_bird_KO3_CD8_p1


title: S53_bird_KO3_CD8_p1


title: S54_bird_KO3_CD8_p1


title: S57_bird_KO3_CD8_p1


title: S52_bird_KO3_CD8_p1


title: S49_bird_KO3_CD8_p1


title: S48_bird_KO3_CD8_p1


title: S47_bird_KO3_CD8_p1


title: S46_bird_KO3_CD8_p1


title: S73_bird_KO3_CD8_p1


title: S45_bird_KO3_CD8_p1


title: S51_bird_KO3_CD8_p1


title: S50_bird_KO3_CD8_p1


title: S71_bird_KO3_CD8_p1


title: S44_bird_KO3_CD8_p1


title: S43_bird_KO3_CD8_p1


title: S42_bird_KO3_CD8_p1


title: S41_bird_KO3_CD8_p1


title: S69_bird_KO3_CD8_p1


title: S39_bird_KO3_CD8_p1


title: S40_bird_KO3_CD8_p1


title: S38_bird_KO3_CD8_p1


title: S37_bird_KO3_CD8_p1


title: S35_bird_KO3_CD8_p1


title: S31_bird_KO3_CD8_p1


title: S36_bird_KO3_CD8_p1


title: S34_bird_KO3_CD8_p1


title: S33_bird_KO3_CD8_p1


title: S30_bird_KO3_CD8_p1


title: S29_bird_KO3_CD8_p1


title: S32_bird_KO3_CD8_p1


title: S28_bird_KO3_CD8_p1


title: S27_bird_KO3_CD8_p1


title: S26_bird_KO3_CD8_p1


title: S25_bird_KO3_CD8_p1


title: S24_bird_KO3_CD8_p1


title: S23_bird_KO3_CD8_p1


title: S22_bird_KO3_CD8_p1


title: S21_bird_KO3_CD8_p1


title: S20_bird_KO3_CD8_p1


title: S18_bird_KO3_CD8_p1


title: S19_bird_KO3_CD8_p1


title: S17_bird_KO3_CD8_p1


title: S16_bird_KO3_CD8_p1


title: S15_bird_KO3_CD8_p1


title: S14_bird_KO3_CD8_p1


title: S12_bird_KO3_CD8_p1


title: S11_bird_KO3_CD8_p1


title: S9_bird_KO3_CD8_p1


title: S10_bird_KO3_CD8_p1


title: S7_bird_KO3_CD8_p1


title: S8_bird_KO3_CD8_p1


title: S6_bird_KO3_CD8_p1


title: S4_bird_KO3_CD8_p1


title: S5_bird_KO3_CD8_p1


title: S2_bird_KO3_CD8_p1


title: S1_bird_KO3_CD8_p1


title: S3_bird_KO3_CD8_p1


title: S376_rabbit_WT3_CD8_p2_SC

description:
Single cell RNAseq
R1_rsem.genes.counts.matrix.TMM_normalized.FPKM


title: S382_rabbit_WT3_CD8_p2_SC


title: S381_rabbit_WT3_CD8_p2_SC


title: S384_rabbit_WT3_CD8_p2_SC


title: S383_rabbit_WT3_CD8_p2_SC


title: S377_rabbit_WT3_CD8_p2_SC


title: S379_rabbit_WT3_CD8_p2_SC


title: S373_rabbit_WT3_CD8_p2_Population


title: S378_rabbit_WT3_CD8_p2_SC


title: S375_rabbit_WT3_CD8_p2_SC


title: S380_rabbit_WT3_CD8_p2_SC


title: S13_bird_KO3_CD8_p1


title: S369_rabbit_WT3_CD8_p2_SC


title: S367_rabbit_WT3_CD8_p2_SC


title: S370_rabbit_WT3_CD8_p2_SC


title: S372_rabbit_WT3_CD8_p2_SC


title: S371_rabbit_WT3_CD8_p2_SC


title: S366_rabbit_WT3_CD8_p2_SC


title: S368_rabbit_WT3_CD8_p2_SC


title: S365_rabbit_WT3_CD8_p2_SC


title: S359_rabbit_WT3_CD8_p2_SC


title: S360_rabbit_WT3_CD8_p2_SC


title: S358_rabbit_WT3_CD8_p2_SC


title: S361_rabbit_WT3_CD8_p2_SC


title: S355_rabbit_WT3_CD8_p2_SC


title: S356_rabbit_WT3_CD8_p2_SC


title: S362_rabbit_WT3_CD8_p2_SC


title: S357_rabbit_WT3_CD8_p2_SC


title: S353_rabbit_WT3_CD8_p2_SC


title: S354_rabbit_WT3_CD8_p2_SC


title: S351_rabbit_WT3_CD8_p2_SC


title: S349_rabbit_WT3_CD8_p2_SC


title: S350_rabbit_WT3_CD8_p2_SC


title: S345_rabbit_WT3_CD8_p2_SC


title: S347_rabbit_WT3_CD8_p2_SC


title: S343_rabbit_WT3_CD8_p2_SC


title: S346_rabbit_WT3_CD8_p2_SC


title: S341_rabbit_WT3_CD8_p2_SC


title: S352_rabbit_WT3_CD8_p2_SC


title: S342_rabbit_WT3_CD8_p2_SC


title: S344_rabbit_WT3_CD8_p2_SC


title: S364_rabbit_WT3_CD8_p2_SC


title: S348_rabbit_WT3_CD8_p2_SC


title: S338_rabbit_WT3_CD8_p2_SC


title: S363_rabbit_WT3_CD8_p2_SC


title: S337_rabbit_WT3_CD8_p2_SC


title: S336_rabbit_WT3_CD8_p2_SC


title: S339_rabbit_WT3_CD8_p2_SC


title: S335_rabbit_WT3_CD8_p2_SC


title: S334_rabbit_WT3_CD8_p2_SC


title: S333_rabbit_WT3_CD8_p2_SC


title: S332_rabbit_WT3_CD8_p2_SC


title: S331_rabbit_WT3_CD8_p2_SC


title: S330_rabbit_WT3_CD8_p2_SC


title: S328_rabbit_WT3_CD8_p2_SC


title: S329_rabbit_WT3_CD8_p2_SC


title: S327_rabbit_WT3_CD8_p2_SC


title: S322_rabbit_WT3_CD8_p2_SC


title: S320_rabbit_WT3_CD8_p2_SC


title: S340_rabbit_WT3_CD8_p2_SC


title: S321_rabbit_WT3_CD8_p2_SC


title: S323_rabbit_WT3_CD8_p2_SC


title: S324_rabbit_WT3_CD8_p2_SC


title: S326_rabbit_WT3_CD8_p2_SC


title: S318_rabbit_WT3_CD8_p2_SC


title: S325_rabbit_WT3_CD8_p2_SC


title: S313_rabbit_WT3_CD8_p2_SC


title: S315_rabbit_WT3_CD8_p2_SC


title: S319_rabbit_WT3_CD8_p2_SC


title: S314_rabbit_WT3_CD8_p2_SC


title: S310_rabbit_WT3_CD8_p2_SC


title: S311_rabbit_WT3_CD8_p2_SC


title: S309_rabbit_WT3_CD8_p2_SC


title: S316_rabbit_WT3_CD8_p2_SC


title: S308_rabbit_WT3_CD8_p2_SC


title: S306_rabbit_WT3_CD8_p2_SC


title: S305_rabbit_WT3_CD8_p2_SC


title: S304_rabbit_WT3_CD8_p2_SC


title: S303_rabbit_WT3_CD8_p2_SC


title: S302_rabbit_WT3_CD8_p2_SC


title: S301_rabbit_WT3_CD8_p2_SC


title: S300_rabbit_WT3_CD8_p2_SC


title: S299_rabbit_WT3_CD8_p2_SC


title: S298_rabbit_WT3_CD8_p2_SC


title: S317_rabbit_WT3_CD8_p2_SC


title: S294_rabbit_WT3_CD8_p2_SC


title: S312_rabbit_WT3_CD8_p2_SC


title: S296_rabbit_WT3_CD8_p2_SC


title: S293_rabbit_WT3_CD8_p2_SC


title: S295_rabbit_WT3_CD8_p2_SC


title: S292_rabbit_WT3_CD8_p2_SC


title: S286_dog_KO3_CD4_p1_SC


title: S287_dog_KO3_CD4_p1_SC


title: S297_rabbit_WT3_CD8_p2_SC


title: S289_rabbit_WT3_CD8_p2_SC


title: S288_dog_KO3_CD4_p1_SC


title: S290_rabbit_WT3_CD8_p2_SC


title: S285_dog_KO3_CD4_p1_SC


title: S284_dog_KO3_CD4_p1_SC


title: S283_dog_KO3_CD4_p1_SC


title: S307_rabbit_WT3_CD8_p2_SC


title: S279_dog_KO3_CD4_p1_SC


title: S291_rabbit_WT3_CD8_p2_SC


title: S277_dog_KO3_CD4_p1_Population


title: S281_dog_KO3_CD4_p1_SC


title: S276_dog_KO3_CD4_p1_SC


title: S282_dog_KO3_CD4_p1_SC


title: S275_dog_KO3_CD4_p1_SC


title: S273_dog_KO3_CD4_p1_SC


title: S271_dog_KO3_CD4_p1_SC


title: S270_dog_KO3_CD4_p1_SC


title: S272_dog_KO3_CD4_p1_SC


title: S274_dog_KO3_CD4_p1_SC


title: S267_dog_KO3_CD4_p1_SC


title: S269_dog_KO3_CD4_p1_SC


title: S263_dog_KO3_CD4_p1_SC


title: S264_dog_KO3_CD4_p1_SC


title: S268_dog_KO3_CD4_p1_SC


title: S266_dog_KO3_CD4_p1_SC


title: S262_dog_KO3_CD4_p1_SC


title: S280_dog_KO3_CD4_p1_SC


title: S255_dog_KO3_CD4_p1_SC


title: S258_dog_KO3_CD4_p1_SC


title: S253_dog_KO3_CD4_p1_SC


title: S257_dog_KO3_CD4_p1_SC


title: S254_dog_KO3_CD4_p1_SC


title: S261_dog_KO3_CD4_p1_SC


title: S259_dog_KO3_CD4_p1_SC


title: S260_dog_KO3_CD4_p1_SC


title: S252_dog_KO3_CD4_p1_SC


title: S256_dog_KO3_CD4_p1_SC


title: S250_dog_KO3_CD4_p1_SC


title: S248_dog_KO3_CD4_p1_SC


title: S249_dog_KO3_CD4_p1_SC


title: S251_dog_KO3_CD4_p1_SC


title: S246_dog_KO3_CD4_p1_SC


title: S242_dog_KO3_CD4_p1_SC


title: S241_dog_KO3_CD4_p1_SC


title: S243_dog_KO3_CD4_p1_SC


title: S244_dog_KO3_CD4_p1_SC


title: S265_dog_KO3_CD4_p1_SC


title: S238_dog_KO3_CD4_p1_SC


title: S239_dog_KO3_CD4_p1_SC


title: S236_dog_KO3_CD4_p1_SC


title: S240_dog_KO3_CD4_p1_SC


title: S235_dog_KO3_CD4_p1_SC


title: S237_dog_KO3_CD4_p1_SC


title: S231_dog_KO3_CD4_p1_SC


title: S234_dog_KO3_CD4_p1_SC


title: S233_dog_KO3_CD4_p1_SC


title: S227_dog_KO3_CD4_p1_SC


title: S220_dog_KO3_CD4_p1_SC


title: S230_dog_KO3_CD4_p1_SC


title: S226_dog_KO3_CD4_p1_SC


title: S247_dog_KO3_CD4_p1_SC


title: S219_dog_KO3_CD4_p1_SC


title: S218_dog_KO3_CD4_p1_SC


title: S223_dog_KO3_CD4_p1_SC


title: S224_dog_KO3_CD4_p1_SC


title: S245_dog_KO3_CD4_p1_SC


title: S232_dog_KO3_CD4_p1_SC


title: S214_dog_KO3_CD4_p1_SC


title: S216_dog_KO3_CD4_p1_SC


title: S213_dog_KO3_CD4_p1_SC


title: S222_dog_KO3_CD4_p1_SC


title: S212_dog_KO3_CD4_p1_SC


title: S209_dog_KO3_CD4_p1_SC


title: S228_dog_KO3_CD4_p1_SC


title: S210_dog_KO3_CD4_p1_SC


title: S208_dog_KO3_CD4_p1_SC


title: S211_dog_KO3_CD4_p1_SC