title: GM12878 cell number 1673

description:
GBC_227-47-Ad1-48-Ad2-80_S752
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1672

status: Public on Dec 20 2018

type: SRA

city: Stanford

first: Paul

last: Khavari

state: CA

address: 269 Campus Drive, CCSR 2150

country: USA

institute: Stanford University

description:
GBC_227-46-Ad1-48-Ad2-79_S751
GBC_counts_GM12878_experiment2.txt

library_source: transcriptomic

data_processing:
Library strategy: Perturb-ATAC-seq
For GBC mapping, any read not containing the expected 27 nt sequence prior to the GBC was discarded, allowing for a maximum Levenshtein distance of 2 to account for sequencing errors.  The subsequent 22 nt sequence was then compared to a list of GBC sequences, allowing for a maximum Levenshtein distance of 3 to be considered a match.  Note that the minimum Levenshtein distance between any two of our GBC sequences was 10. This generated a counts-per-cell table for each GBC sequence and cell. For sgRNA mapping, raw reads for sgRNA sequencing were matched to a list of sgRNA sequences used in the experiment. We required strict matching of the 20bp variable sequence along with 18bp of the standard sgRNA backbone. This resulted in the counts-per-cell table for each sgRNA.
Genome_build: hg19
Supplementary_files_format_and_content: Table of raw GBC or sgRNA counts per cell. Each row represents an individual cell and each column represents a distinct GBC or sgRNA considered in the experiment.

molecule: total RNA

organism: Homo sapiens

source_name: GM12878 cell line

growth_protocol: GM1878 cells were grown in RPMI 1640 with 10% FBS and 1% pen/strep. Human primary keratinocytes were cultured in 50/50 growth media and induced to differentiated for three or six days as previously described (Zarnegar et al., 2012)

extract_protocol: Single cells were captured using the C1 Single-Cell Auto Prep IFC microfluidic chips and assayed using the transcript-indexed single-cell ATAC-seq protocol. In a 96-well plate, 6.5 µL from a total of 15ul of harvested libraries were amplified in a 20 µL PCR for an additional 17 cycles (1uM each V1 primer, 1x NEBnext High-Fidelity PCR Master Mix) using the following PCR conditions: 98°C for 30 s, and cycling at 98°C for 10 s, 63°C for 30 s, and 72°C for 45 s. Then 2ul of the previous V1 PCR reaction were transferred to a nested V2 PCR reaction with V2 primers at the same concentration and using same cycling parameters as the V1 reaction, for 15 cycles. Next 2ul of the previous V2 PCR reaction were transferred to a cell barcoding V3 PCR reaction with V3 primers at the same concentration and using the same cycling parameters as the V2 reaction, for 15 cycles. Finally V3 reactions were pooled, purified, sized selected via PAGE, and quantified by qPCR prior to sequencing.

tag: cell type

value: GM12878 cell line


title: GM12878 cell 1869

description:
Peak_counts_GM12878_experiment2.txt.gz
262-50-Ad1-17-Ad2-5_S5

library_source: genomic

data_processing:
For ATAC-seq data: adapter sequence trimming, mapping to Hg19 using Bowtie2, and PCR duplicate removal using Picard Tools was performed. ATAC-seq peaks were called with MACS2 and reads in each peak were counted for each sample.
Genome_build: hg19
Supplementary_files_format_and_content: ATAC-seq counts table file; adapter trimmed, reads aligned, pcr duplicates removed, and reads in ATAC-seq peaks counted

molecule: genomic DNA

extract_protocol: Single cells were captured using the C1 Single-Cell Auto Prep IFC microfluidic chips and assayed using the single-cell ATAC-seq protocol. In a 96-well plate, 6-7 µL from a total of 15ul of harvested libraries were amplified in 50 µL PCR for an additional 14 cycles (1.25 µM custom Nextera dual-index PCR primers in 1x NEBnext High-Fidelity PCR Master Mix) using the following PCR conditions: 72°C for 5min; 98°C for 30 s; and thermocycling at 98°C for 10 s, 72°C for 30 s, and 72°C for 1 min. Pooled libraries were purified and quantified using qPCR prior to sequencing.


title: GM12878 cell number 1671

description:
GBC_227-45-Ad1-48-Ad2-75_S747
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1868

description:
Peak_counts_GM12878_experiment2.txt.gz
262-4-Ad1-17-Ad2-9_S9


title: GM12878 cell 1867

description:
Peak_counts_GM12878_experiment2.txt.gz
262-49-Ad1-17-Ad2-4_S4


title: GM12878 cell 1866

description:
Peak_counts_GM12878_experiment2.txt.gz
262-48-Ad1-24-Ad2-9_S177


title: GM12878 cell 1865

description:
Peak_counts_GM12878_experiment2.txt.gz
262-47-Ad1-24-Ad2-8_S176


title: GM12878 cell number 1669

description:
GBC_227-43-Ad1-48-Ad2-73_S745
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1668

description:
GBC_227-42-Ad1-47-Ad2-81_S729
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1864

description:
Peak_counts_GM12878_experiment2.txt.gz
262-46-Ad1-24-Ad2-7_S175


title: GM12878 cell 1863

description:
Peak_counts_GM12878_experiment2.txt.gz
262-45-Ad1-24-Ad2-3_S171


title: GM12878 cell number 1665

description:
GBC_227-3-Ad1-41-Ad2-73_S577
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1664

description:
GBC_227-39-Ad1-47-Ad2-75_S723
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1667

description:
GBC_227-41-Ad1-47-Ad2-80_S728
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1861

description:
Peak_counts_GM12878_experiment2.txt.gz
262-43-Ad1-24-Ad2-1_S169


title: GM12878 cell number 1676

description:
GBC_227-4-Ad1-41-Ad2-81_S585
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1862

description:
Peak_counts_GM12878_experiment2.txt.gz
262-44-Ad1-24-Ad2-2_S170


title: GM12878 cell number 1666

description:
GBC_227-40-Ad1-47-Ad2-79_S727
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1860

description:
Peak_counts_GM12878_experiment2.txt.gz
262-42-Ad1-23-Ad2-9_S153


title: GM12878 cell number 1663

description:
GBC_227-38-Ad1-47-Ad2-74_S722
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1858

description:
Peak_counts_GM12878_experiment2.txt.gz
262-40-Ad1-23-Ad2-7_S151


title: GM12878 cell number 1662

description:
GBC_227-37-Ad1-47-Ad2-73_S721
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1661

description:
GBC_227-36-Ad1-46-Ad2-81_S705
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1660

description:
GBC_227-35-Ad1-46-Ad2-80_S704
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1659

description:
GBC_227-34-Ad1-46-Ad2-79_S703
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1855

description:
Peak_counts_GM12878_experiment2.txt.gz
262-38-Ad1-23-Ad2-2_S146


title: GM12878 cell number 1670

description:
GBC_227-44-Ad1-48-Ad2-74_S746
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1658

description:
GBC_227-33-Ad1-46-Ad2-75_S699
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1854

description:
Peak_counts_GM12878_experiment2.txt.gz
262-37-Ad1-23-Ad2-1_S145


title: GM12878 cell number 1657

description:
GBC_227-32-Ad1-46-Ad2-74_S698
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1940

description:
Peak_counts_GM12878_experiment2.txt.gz
263-28-Ad1-29-Ad2-31_S295


title: GM12878 cell 1852

description:
Peak_counts_GM12878_experiment2.txt.gz
262-35-Ad1-22-Ad2-8_S128


title: GM12878 cell number 1655

description:
GBC_227-30-Ad1-45-Ad2-81_S681
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1654

description:
GBC_227-2-Ad1-41-Ad2-74_S578
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1851

description:
Peak_counts_GM12878_experiment2.txt.gz
262-34-Ad1-22-Ad2-7_S127


title: GM12878 cell 1850

description:
Peak_counts_GM12878_experiment2.txt.gz
262-33-Ad1-22-Ad2-3_S123


title: GM12878 cell 1849

description:
Peak_counts_GM12878_experiment2.txt.gz
262-32-Ad1-22-Ad2-2_S122


title: GM12878 cell 1848

description:
Peak_counts_GM12878_experiment2.txt.gz
262-31-Ad1-22-Ad2-1_S121


title: GM12878 cell number 1652

description:
GBC_227-28-Ad1-45-Ad2-79_S679
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1859

description:
Peak_counts_GM12878_experiment2.txt.gz
262-41-Ad1-23-Ad2-8_S152


title: GM12878 cell number 1651

description:
GBC_227-27-Ad1-45-Ad2-75_S675
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1847

description:
Peak_counts_GM12878_experiment2.txt.gz
262-30-Ad1-21-Ad2-9_S105


title: GM12878 cell 1857

description:
Peak_counts_GM12878_experiment2.txt.gz
262-3-Ad1-17-Ad2-1_S1


title: GM12878 cell 1846

description:
Peak_counts_GM12878_experiment2.txt.gz
262-2-Ad1-17-Ad2-2_S2


title: GM12878 cell number 1649

description:
GBC_227-25-Ad1-45-Ad2-73_S673
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1856

description:
Peak_counts_GM12878_experiment2.txt.gz
262-39-Ad1-23-Ad2-3_S147


title: GM12878 cell 1845

description:
Peak_counts_GM12878_experiment2.txt.gz
262-29-Ad1-21-Ad2-8_S104


title: GM12878 cell 1843

description:
Peak_counts_GM12878_experiment2.txt.gz
262-27-Ad1-21-Ad2-3_S99


title: GM12878 cell number 1646

description:
GBC_227-22-Ad1-44-Ad2-81_S657
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1644

description:
GBC_227-20-Ad1-44-Ad2-74_S650
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1842

description:
Peak_counts_GM12878_experiment2.txt.gz
262-26-Ad1-21-Ad2-2_S98


title: GM12878 cell number 1647

description:
GBC_227-23-Ad1-44-Ad2-80_S656
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1656

description:
GBC_227-31-Ad1-46-Ad2-73_S697
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1645

description:
GBC_227-21-Ad1-44-Ad2-73_S649
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1853

description:
Peak_counts_GM12878_experiment2.txt.gz
262-36-Ad1-22-Ad2-9_S129


title: GM12878 cell 1840

description:
Peak_counts_GM12878_experiment2.txt.gz
262-24-Ad1-20-Ad2-7_S79


title: GM12878 cell number 1643

description:
GBC_227-1-Ad1-41-Ad2-75_S579
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1838

description:
Peak_counts_GM12878_experiment2.txt.gz
262-22-Ad1-20-Ad2-9_S81


title: GM12878 cell number 1642

description:
GBC_227-19-Ad1-44-Ad2-75_S651
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1837

description:
Peak_counts_GM12878_experiment2.txt.gz
262-21-Ad1-20-Ad2-1_S73


title: GM12878 cell number 1653

description:
GBC_227-29-Ad1-45-Ad2-80_S680
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1640

description:
GBC_227-17-Ad1-43-Ad2-80_S632
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1836

description:
Peak_counts_GM12878_experiment2.txt.gz
262-20-Ad1-20-Ad2-2_S74


title: GM12878 cell 1835

description:
Peak_counts_GM12878_experiment2.txt.gz
262-1-Ad1-17-Ad2-3_S3


title: GM12878 cell number 1650

description:
GBC_227-26-Ad1-45-Ad2-74_S674
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1638

description:
GBC_227-15-Ad1-43-Ad2-73_S625
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1639

description:
GBC_227-16-Ad1-43-Ad2-81_S633
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1637

description:
GBC_227-14-Ad1-43-Ad2-74_S626
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1834

description:
Peak_counts_GM12878_experiment2.txt.gz
262-19-Ad1-20-Ad2-3_S75


title: GM12878 cell 1844

description:
Peak_counts_GM12878_experiment2.txt.gz
262-28-Ad1-21-Ad2-7_S103


title: GM12878 cell number 1636

description:
GBC_227-13-Ad1-43-Ad2-75_S627
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1648

description:
GBC_227-24-Ad1-44-Ad2-79_S655
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1833

description:
Peak_counts_GM12878_experiment2.txt.gz
262-18-Ad1-19-Ad2-7_S55


title: GM12878 cell 1841

description:
Peak_counts_GM12878_experiment2.txt.gz
262-25-Ad1-21-Ad2-1_S97


title: GM12878 cell 1832

description:
Peak_counts_GM12878_experiment2.txt.gz
262-17-Ad1-19-Ad2-8_S56


title: GM12878 cell number 1635

description:
GBC_227-12-Ad1-42-Ad2-79_S607
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1831

description:
Peak_counts_GM12878_experiment2.txt.gz
262-16-Ad1-19-Ad2-9_S57


title: GM12878 cell 1830

description:
Peak_counts_GM12878_experiment2.txt.gz
262-15-Ad1-19-Ad2-1_S49


title: GM12878 cell number 1633

description:
GBC_227-10-Ad1-42-Ad2-81_S609
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1829

description:
Peak_counts_GM12878_experiment2.txt.gz
262-14-Ad1-19-Ad2-2_S50


title: GM12878 cell number 1632

description:
GBC_198-9-Ad1-26-Ad2-37_S173
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1634

description:
GBC_227-11-Ad1-42-Ad2-80_S608
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1839

description:
Peak_counts_GM12878_experiment2.txt.gz
262-23-Ad1-20-Ad2-8_S80


title: GM12878 cell number 1641

description:
GBC_227-18-Ad1-43-Ad2-79_S631
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1828

description:
Peak_counts_GM12878_experiment2.txt.gz
262-13-Ad1-19-Ad2-3_S51


title: GM12878 cell number 1631

description:
GBC_198-96-Ad1-32-Ad2-46_S326
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1827

description:
Peak_counts_GM12878_experiment2.txt.gz
262-12-Ad1-18-Ad2-7_S31


title: GM12878 cell number 1629

description:
GBC_198-94-Ad1-32-Ad2-48_S328
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1826

description:
Peak_counts_GM12878_experiment2.txt.gz
262-11-Ad1-18-Ad2-8_S32


title: GM12878 cell number 1630

description:
GBC_198-95-Ad1-32-Ad2-47_S327
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1626

description:
GBC_198-91-Ad1-32-Ad2-42_S322
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1628

description:
GBC_198-93-Ad1-32-Ad2-40_S320
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1822

description:
Peak_counts_GM12878_experiment2.txt.gz
231-95-Ad1-48-Ad2-83_S755


title: GM12878 cell 1823

description:
Peak_counts_GM12878_experiment2.txt.gz
231-96-Ad1-48-Ad2-82_S754


title: GM12878 cell number 1627

description:
GBC_198-92-Ad1-32-Ad2-41_S321
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1625

description:
GBC_198-90-Ad1-31-Ad2-46_S302
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1821

description:
Peak_counts_GM12878_experiment2.txt.gz
231-94-Ad1-48-Ad2-84_S756


title: GM12878 cell number 1622

description:
GBC_198-88-Ad1-31-Ad2-48_S304
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1623

description:
GBC_198-89-Ad1-31-Ad2-47_S303
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1620

description:
GBC_198-86-Ad1-31-Ad2-41_S297
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1624

description:
GBC_198-8-Ad1-26-Ad2-38_S174
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1818

description:
Peak_counts_GM12878_experiment2.txt.gz
231-91-Ad1-48-Ad2-78_S750


title: GM12878 cell 1819

description:
Peak_counts_GM12878_experiment2.txt.gz
231-92-Ad1-48-Ad2-77_S749


title: GM12878 cell 1816

description:
Peak_counts_GM12878_experiment2.txt.gz
231-8-Ad1-42-Ad2-74_S602


title: GM12878 cell number 1619

description:
GBC_198-85-Ad1-31-Ad2-42_S298
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1820

description:
Peak_counts_GM12878_experiment2.txt.gz
231-93-Ad1-48-Ad2-76_S748


title: GM12878 cell number 1621

description:
GBC_198-87-Ad1-31-Ad2-40_S296
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1618

description:
GBC_198-84-Ad1-30-Ad2-46_S278
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1817

description:
Peak_counts_GM12878_experiment2.txt.gz
231-90-Ad1-47-Ad2-82_S730


title: GM12878 cell number 1616

description:
GBC_198-82-Ad1-30-Ad2-48_S280
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1815

description:
Peak_counts_GM12878_experiment2.txt.gz
231-89-Ad1-47-Ad2-83_S731


title: GM12878 cell 1811

description:
Peak_counts_GM12878_experiment2.txt.gz
231-85-Ad1-47-Ad2-78_S726


title: GM12878 cell 1812

description:
Peak_counts_GM12878_experiment2.txt.gz
231-86-Ad1-47-Ad2-77_S725


title: GM12878 cell 1814

description:
Peak_counts_GM12878_experiment2.txt.gz
231-88-Ad1-47-Ad2-84_S732


title: GM12878 cell 1813

description:
Peak_counts_GM12878_experiment2.txt.gz
231-87-Ad1-47-Ad2-76_S724


title: GM12878 cell 1825

description:
Peak_counts_GM12878_experiment2.txt.gz
262-10-Ad1-18-Ad2-9_S33


title: GM12878 cell number 1615

description:
GBC_198-81-Ad1-30-Ad2-40_S272
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1824

description:
Peak_counts_GM12878_experiment2.txt.gz
231-9-Ad1-42-Ad2-73_S601


title: GM12878 cell 1810

description:
Peak_counts_GM12878_experiment2.txt.gz
231-84-Ad1-46-Ad2-82_S706


title: GM12878 cell number 1613

description:
GBC_198-7-Ad1-26-Ad2-39_S175
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1809

description:
Peak_counts_GM12878_experiment2.txt.gz
231-83-Ad1-46-Ad2-83_S707


title: GM12878 cell number 1614

description:
GBC_198-80-Ad1-30-Ad2-41_S273
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1612

description:
GBC_198-79-Ad1-30-Ad2-42_S274
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1807

description:
Peak_counts_GM12878_experiment2.txt.gz
231-81-Ad1-46-Ad2-76_S700


title: GM12878 cell number 1611

description:
GBC_198-78-Ad1-29-Ad2-46_S254
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1806

description:
Peak_counts_GM12878_experiment2.txt.gz
231-80-Ad1-46-Ad2-77_S701


title: GM12878 cell 1808

description:
Peak_counts_GM12878_experiment2.txt.gz
231-82-Ad1-46-Ad2-84_S708


title: GM12878 cell 1805

description:
Peak_counts_GM12878_experiment2.txt.gz
231-7-Ad1-42-Ad2-75_S603


title: GM12878 cell number 1617

description:
GBC_198-83-Ad1-30-Ad2-47_S279
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1802

description:
Peak_counts_GM12878_experiment2.txt.gz
231-77-Ad1-45-Ad2-83_S683


title: GM12878 cell number 1610

description:
GBC_198-77-Ad1-29-Ad2-47_S255
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1609

description:
GBC_198-76-Ad1-29-Ad2-48_S256
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1803

description:
Peak_counts_GM12878_experiment2.txt.gz
231-78-Ad1-45-Ad2-82_S682


title: GM12878 cell number 1608

description:
GBC_198-75-Ad1-29-Ad2-40_S248
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1607

description:
GBC_198-74-Ad1-29-Ad2-41_S249
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1606

description:
GBC_198-73-Ad1-29-Ad2-42_S250
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1602

description:
GBC_198-6-Ad1-25-Ad2-43_S155
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell number 1603

description:
GBC_198-70-Ad1-28-Ad2-46_S230
GBC_counts_GM12878_experiment2.txt


title: GM12878 cell 1799

description:
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title: GM12878 cell number 1601

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title: GM12878 cell 1800

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title: GM12878 cell 1804

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title: GM12878 cell 1797

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title: GM12878 cell number 1600

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title: GM12878 cell number 1598

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GBC_counts_GM12878_experiment2.txt


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GBC_140-32-Ad1-38-Ad2-62_S518
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GBC_140-31-Ad1-38-Ad2-61_S517
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GBC_counts_GM12878_experiment2.txt


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GBC_140-2-Ad1-33-Ad2-62_S398
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GBC_140-29-Ad1-37-Ad2-68_S500
GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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198-1-Ad1-25-Ad2-39_S11


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GBC_counts_GM12878_experiment2.txt


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198-19-Ad1-28-Ad2-39_S47


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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198-17-Ad1-27-Ad2-44_S40


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GBC_counts_GM12878_experiment2.txt


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198-12-Ad1-26-Ad2-43_S27


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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197-93-Ad1-32-Ad2-28_S192


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197-92-Ad1-32-Ad2-29_S193


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GBC_counts_GM12878_experiment2.txt


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197-91-Ad1-32-Ad2-30_S194


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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197-89-Ad1-31-Ad2-35_S187


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GBC_counts_GM12878_experiment2.txt


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197-87-Ad1-31-Ad2-28_S180


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197-85-Ad1-31-Ad2-30_S182


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_139-7-Ad1-42-Ad2-87_S615
GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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197-72-Ad1-28-Ad2-36_S152


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GBC_counts_GM12878_experiment2.txt


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GBC_counts_GM12878_experiment2.txt


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197-60-Ad1-26-Ad2-36_S128


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197-57-Ad1-26-Ad2-30_S122


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197-64-Ad1-27-Ad2-34_S138


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197-53-Ad1-25-Ad2-35_S115


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197-61-Ad1-27-Ad2-28_S132


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197-51-Ad1-25-Ad2-30_S110


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197-50-Ad1-25-Ad2-29_S109


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