title: SAL_MU_48h_2

description:
m.muscle.saline.48.2
Gene expression in muscle 48hrs after injection with saline.

source_name: Muscle, 48hr, Saline, replicate 2


title: SAL_MU_48h_1

status: Public on Jan 31 2019

type: RNA

city: London

first: Deniz

last: Cizmeci

address: Imperial College London

country: United Kingdom

institute: Imperial College London

description:
m.muscle.saline.48.1
Gene expression in muscle 48hrs after injection with saline.

hyb_protocol: Quantity and labeling efficiency were verified before hybridization to whole-genome 8×60 k mouse expression arrays (Agilent design ID 028005).

scan_protocol: Scanned at 5 μm using an Agilent scanner.

data_processing:
Image analysis and data extraction were performed with Agilent's Feature Extraction software (version 11.5) to generate the raw expression data.
Microarray data were pre-processed and normalised using R package limma. The raw data were first background corrected using the normexp method. Background corrected signals were quantile normalised between arrays.

label: not provided

molecule: total RNA

organism: Mus musculus

source_name: Muscle, 48hr, Saline, replicate 1

label_protocol: Gene expression data were generated from high-quality RNA samples on an Agilent microarray platform (Agilent Technologies). RNA was labeled with a Low Input Quick Amp Labeling Kit (Agilent Technologies) according to the manufacturer’s instructions.

extract_protocol:
Tissue Samples - Small pieces of tissue (3mm x 3mm x 3mm) were harvested and flash frozen in liquid nitrogen. Total RNA isolation including the miRNA species was performed using the miRNeasy mini kit (Qiagen, UK), as described in the standard protocol for purification of microRNA and total RNA from tissues and cells. Briefly, 700 µL QIAzol lysis reagent was added to the tissue sample, and disrupted and homogenized using a tissueruptor probe. Homogenate was incubated at room temperature (15–25°C) for 5 min before addition of 140 µL chloroform and vigorous shaking for 15 s. After incubation at room temperature for 2–3 min the homogenate was centrifuged for 15 min at 12,000 x g at 4°C. The upper aqueous phase was then transferred to a new collection tube (350 µL). 1.5 volumes (525 µL) of 100% ethanol was added and mixed thoroughly by pipetting then all sample was transferred into an RNeasy® Mini column, the sample being pulled through the column by vacuum manifold. The sample on the column was washed using 700 µL Buffer RWT, followed by 2 washes using 500 µL Buffer RPE. The RNeasy Mini column was then placed into a new 2 mL collection tube and centrifuged at full speed for 1 min to completely dry the membrane. The RNeasy Mini column was then transferred to a new 1.5 mL collection tube and 30 µL RNase-free water was directly pipetted onto the column membrane, then centrifuged for 1 min at ≥8000 x g to elute. Purified RNA was stored at -80°C until required for microarray hybridisation.
Blood Samples - 100 µL of peripheral blood harvested from the mouse tail was collected directly into an RNAprotect Animal Blood Tube and the tubes incubated at room temperature (15–25°C) for 2 hours. The blood tubes were then flash frozen in liquid nitrogen for storage. RNA isolation was performed as described in the kit protocol for purification of Total RNA, including miRNA, from RNAprotect stabilized animal blood tubes (100 µL). Briefly, completely thawed tubes were first centrifuged for 3 min at 5000 x g, then the supernatant removed by careful pipetting. The pellet was resuspended in 1 mL of RNase-free water and transferred to a clean RNase-free 2 mL tube. The pellet was completely resuspended in the water, centrifuged for 3 min at 5000 x g and the supernatant carefully removed by pipetting. The pellet was then dissolved in 240 µL Buffer RSB before addition of 200 µL Buffer RBT and 20 µL proteinase K enzyme solution. The tube was vortexed for 5 s then incubated at 55°C for 10 min in a shaking incubator at 1200 rpm. After incubation the sample was added into a Qiashredder spin column and centrifuged for 3 min at 10,000 x g. The supernatant was then transferred to a clean tube and 690 µL 100% ethanol added, mixed thoroughly by pipetting then all sample was transferred into an RNeasy Mini column, the sample being pulled through the column by vacuum manifold. The sample on the column was washed using 350 µL Buffer RWT, followed by addition of 80 µL DNase I solution (in Buffer RDD) and incubation at room temperature for 15 min. After DNase 1 treatment the column was washed with a further 350 µL of RWT followed by 2 washes using 500 µL Buffer RPE and a final wash with 500 µL 80% RNase-free ethanol. The RNeasy Mini column was then placed into a new 2 mL collection tube and centrifuged at full speed for 1 min to completely dry the membrane. The column was then transferred to a new 1.5 mL collection tube and 30 µL RNase-free REB buffer was directly pipetted onto the column membrane, then centrifuged for 1 min at ≥8000 x g to elute. Purified RNA was stored at -80°C until required for microarray hybridisation.

treatment_protocol: 6- to 8-week-old female CB6F1 mice were purchased from Charles River. Animals received a single injection in their right hind leg quadricep muscle and were then culled at specific intervals after the vaccination, either 4, 8, 24, 48, 72 or 168 Hrs. A control group that did not receive a vaccination was culled and tissues harvested. A further control group was employed that received a single saline injection in the right hind leg quadriceps muscle and were culled at the same intervals as the animals that received an active formulation. When each animal was culled the injected muscle site and the iliac lymph nodes that drain the hind leg quadriceps muscles were harvested and flash frozen in liquid nitrogen. Peripheral blood, sampled from the mouse tail vein immediately before humane euthanasia was collected (100 µL) in RNAprotect animal blood tubes (Qiagen, UK). Groups of mice (n = 5 per group per timepoint) received 1/10th of the human dose in 50 µL of one of the following licensed vaccines: Pentavac SD (Diphtheria, Tetanus, Pertussis (Whole Cell), Hepatitis B (rDNA) and Haemophilus Type b Conjugate Vaccine); Agrippal (Trivalent Flu Subunits – H3N2, H1N1 and Influenza B); Fluad (Trivalent Flu Subunits – H3N2, H1N1 and Influenza B + MF59® (oil-in-water emulsion)); Engerix B (Recombinant Hepatitis B) and either Poly I:C (Sigma, UK – P0913: 50 µL of a 1 mg/mL solution), LPS (Invivogen, UK – LPS-EB Ultrapure: 50 µL of a 0.5 mg/mL solution), IFA (Seppic, France – Montanide ISA 51 VG: 50 µL of a 1:1 mixture of IFA and Saline) or Saline alone (Sigma, UK – 50 µL).

tag: strain/background

tag: gender

value: Female

tag: tissue

value: muscle

tag: treatment

value: saline

tag: timepoint

tag: animal replicate


title: PolyIC_MU_48h_3

description:
m.muscle.PolyIC.48.3
Gene expression in muscle 48hrs after injection with Poly I:C.

source_name: Muscle, 48hr, Poly I:C, replicate 3

value: PolyIC


title: PolyIC_MU_48h_2

description:
m.muscle.PolyIC.48.2
Gene expression in muscle 48hrs after injection with Poly I:C.

source_name: Muscle, 48hr, Poly I:C, replicate 2


title: PERT_MU_48h_1

description:
m.muscle.Pertussis.48.1
Gene expression in muscle 48hrs after injection with Pentavac SD.

source_name: Muscle, 48hr, Pentavac SD, replicate 1

value: Pentavac SD


title: LPS_MU_48h_2

description:
m.muscle.LPS.48.2
Gene expression in muscle 48hrs after injection with LPS.

source_name: Muscle, 48hr, LPS, replicate 2

value: LPS


title: PolyIC_MU_48h_1

description:
m.muscle.PolyIC.48.1
Gene expression in muscle 48hrs after injection with Poly I:C.

source_name: Muscle, 48hr, Poly I:C, replicate 1


title: ENG_MU_48h_5

description:
m.muscle.Engerix.48.5
Gene expression in muscle 48hrs after injection with Engerix B.

source_name: Muscle, 48hr, Engerix B, replicate 5

value: Engerix B


title: PolyIC_MU_48h_5

description:
m.muscle.PolyIC.48.5
Gene expression in muscle 48hrs after injection with Poly I:C.

source_name: Muscle, 48hr, Poly I:C, replicate 5


title: IFA_MU_48h_3

description:
m.muscle.IFA.48.3
Gene expression in muscle 48hrs after injection with IFA.

source_name: Muscle, 48hr, IFA, replicate 3

value: IFA


title: PERT_MU_48h_3

description:
m.muscle.Pertussis.48.3
Gene expression in muscle 48hrs after injection with Pentavac SD.

source_name: Muscle, 48hr, Pentavac SD, replicate 3


title: PERT_MU_48h_4

description:
m.muscle.Pertussis.48.4
Gene expression in muscle 48hrs after injection with Pentavac SD.

source_name: Muscle, 48hr, Pentavac SD, replicate 4


title: LPS_MU_48h_4

description:
m.muscle.LPS.48.4
Gene expression in muscle 48hrs after injection with LPS.

source_name: Muscle, 48hr, LPS, replicate 4


title: PERT_MU_48h_5

description:
m.muscle.Pertussis.48.5
Gene expression in muscle 48hrs after injection with Pentavac SD.

source_name: Muscle, 48hr, Pentavac SD, replicate 5


title: LPS_MU_48h_5

description:
m.muscle.LPS.48.5
Gene expression in muscle 48hrs after injection with LPS.

source_name: Muscle, 48hr, LPS, replicate 5


title: PolyIC_MU_48h_4

description:
m.muscle.PolyIC.48.4
Gene expression in muscle 48hrs after injection with Poly I:C.

source_name: Muscle, 48hr, Poly I:C, replicate 4


title: LPS_MU_48h_1

description:
m.muscle.LPS.48.1
Gene expression in muscle 48hrs after injection with LPS.

source_name: Muscle, 48hr, LPS, replicate 1


title: PERT_MU_48h_2

description:
m.muscle.Pertussis.48.2
Gene expression in muscle 48hrs after injection with Pentavac SD.

source_name: Muscle, 48hr, Pentavac SD, replicate 2


title: IFA_MU_48h_4

description:
m.muscle.IFA.48.4
Gene expression in muscle 48hrs after injection with IFA.

source_name: Muscle, 48hr, IFA, replicate 4


title: IFA_MU_48h_1

description:
m.muscle.IFA.48.1
Gene expression in muscle 48hrs after injection with IFA.

source_name: Muscle, 48hr, IFA, replicate 1


title: IFA_MU_48h_5

description:
m.muscle.IFA.48.5
Gene expression in muscle 48hrs after injection with IFA.

source_name: Muscle, 48hr, IFA, replicate 5


title: LPS_MU_48h_3

description:
m.muscle.LPS.48.3
Gene expression in muscle 48hrs after injection with LPS.

source_name: Muscle, 48hr, LPS, replicate 3


title: IFA_MU_48h_2

description:
m.muscle.IFA.48.2
Gene expression in muscle 48hrs after injection with IFA.

source_name: Muscle, 48hr, IFA, replicate 2


title: ENG_MU_48h_3

description:
m.muscle.Engerix.48.3
Gene expression in muscle 48hrs after injection with Engerix B.

source_name: Muscle, 48hr, Engerix B, replicate 3


title: TriFLU-MF59_MLN_48h_5

description:
m.MLN.TriFluMF59.48.5
Gene expression in lymph nodes 48hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Fluad, replicate 5

value: draining medial iliac lymph nodes (MLN)

value: Fluad


title: ENG_MU_48h_2

description:
m.muscle.Engerix.48.2
Gene expression in muscle 48hrs after injection with Engerix B.

source_name: Muscle, 48hr, Engerix B, replicate 2


title: ENG_MU_48h_1

description:
m.muscle.Engerix.48.1
Gene expression in muscle 48hrs after injection with Engerix B.

source_name: Muscle, 48hr, Engerix B, replicate 1


title: ENG_MU_48h_4

description:
m.muscle.Engerix.48.4
Gene expression in muscle 48hrs after injection with Engerix B.

source_name: Muscle, 48hr, Engerix B, replicate 4


title: TriFLU_BL_72h_2

description:
m.blood.TriFlu.72.2
Gene expression in blood 72hrs after injection with Agrippal.

source_name: Peripheral Blood, 72hr, Agrippal, replicate 2

value: PBMC

value: Agrippal


title: TriFLU_MLN_48h_5

description:
m.MLN.TriFlu.48.5
Gene expression in lymph nodes 48hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Agrippal, replicate 5


title: TriFLU-MF59_MLN_48h_1

description:
m.MLN.TriFluMF59.48.1
Gene expression in lymph nodes 48hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Fluad, replicate 1


title: TriFLU-MF59_MLN_48h_2

description:
m.MLN.TriFluMF59.48.2
Gene expression in lymph nodes 48hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Fluad, replicate 2


title: TriFLU-MF59_MLN_48h_3

description:
m.MLN.TriFluMF59.48.3
Gene expression in lymph nodes 48hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Fluad, replicate 3


title: TriFLU_MLN_48h_2

description:
m.MLN.TriFlu.48.2
Gene expression in lymph nodes 48hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Agrippal, replicate 2


title: SAL_MLN_48h_4

description:
m.MLN.saline.48.4
Gene expression in lymph nodes 48hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Saline, replicate 4


title: TriFLU_MLN_48h_3

description:
m.MLN.TriFlu.48.3
Gene expression in lymph nodes 48hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Agrippal, replicate 3


title: TriFLU-MF59_MLN_48h_4

description:
m.MLN.TriFluMF59.48.4
Gene expression in lymph nodes 48hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Fluad, replicate 4


title: PERT_MLN_48h_5

description:
m.MLN.Pertussis.48.5
Gene expression in lymph nodes 48hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Pentavac SD, replicate 5


title: TriFLU_MLN_48h_4

description:
m.MLN.TriFlu.48.4
Gene expression in lymph nodes 48hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Agrippal, replicate 4


title: TriFLU_MLN_48h_1

description:
m.MLN.TriFlu.48.1
Gene expression in lymph nodes 48hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Agrippal, replicate 1


title: SAL_MLN_48h_2

description:
m.MLN.saline.48.2
Gene expression in lymph nodes 48hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Saline, replicate 2


title: PolyIC_MLN_48h_1

description:
m.MLN.PolyIC.48.1
Gene expression in lymph nodes 48hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Poly I:C, replicate 1


title: SAL_MLN_48h_1

description:
m.MLN.saline.48.1
Gene expression in lymph nodes 48hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Saline, replicate 1


title: PolyIC_MLN_48h_4

description:
m.MLN.PolyIC.48.4
Gene expression in lymph nodes 48hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Poly I:C, replicate 4


title: SAL_MLN_48h_3

description:
m.MLN.saline.48.3
Gene expression in lymph nodes 48hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Saline, replicate 3


title: LPS_MLN_48h_3

description:
m.MLN.LPS.48.3
Gene expression in lymph nodes 48hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 48hr, LPS, replicate 3


title: PolyIC_MLN_48h_2

description:
m.MLN.PolyIC.48.2
Gene expression in lymph nodes 48hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Poly I:C, replicate 2


title: PolyIC_MLN_48h_3

description:
m.MLN.PolyIC.48.3
Gene expression in lymph nodes 48hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Poly I:C, replicate 3


title: SAL_MLN_48h_5

description:
m.MLN.saline.48.5
Gene expression in lymph nodes 48hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Saline, replicate 5


title: PERT_MLN_48h_3

description:
m.MLN.Pertussis.48.3
Gene expression in lymph nodes 48hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Pentavac SD, replicate 3


title: IFA_MLN_48h_4

description:
m.MLN.IFA.48.4
Gene expression in lymph nodes 48hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 48hr, IFA, replicate 4


title: IFA_MLN_48h_3

description:
m.MLN.IFA.48.3
Gene expression in lymph nodes 48hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 48hr, IFA, replicate 3


title: IFA_MLN_48h_5

description:
m.MLN.IFA.48.5
Gene expression in lymph nodes 48hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 48hr, IFA, replicate 5


title: IFA_MLN_48h_2

description:
m.MLN.IFA.48.2
Gene expression in lymph nodes 48hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 48hr, IFA, replicate 2


title: PolyIC_MLN_48h_5

description:
m.MLN.PolyIC.48.5
Gene expression in lymph nodes 48hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Poly I:C, replicate 5


title: LPS_MLN_48h_1

description:
m.MLN.LPS.48.1
Gene expression in lymph nodes 48hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 48hr, LPS, replicate 1


title: PERT_MLN_48h_2

description:
m.MLN.Pertussis.48.2
Gene expression in lymph nodes 48hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Pentavac SD, replicate 2


title: LPS_MLN_48h_2

description:
m.MLN.LPS.48.2
Gene expression in lymph nodes 48hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 48hr, LPS, replicate 2


title: PERT_MLN_48h_1

description:
m.MLN.Pertussis.48.1
Gene expression in lymph nodes 48hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Pentavac SD, replicate 1


title: PERT_MLN_48h_4

description:
m.MLN.Pertussis.48.4
Gene expression in lymph nodes 48hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Pentavac SD, replicate 4


title: LPS_MLN_48h_4

description:
m.MLN.LPS.48.4
Gene expression in lymph nodes 48hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 48hr, LPS, replicate 4


title: LPS_MLN_48h_5

description:
m.MLN.LPS.48.5
Gene expression in lymph nodes 48hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 48hr, LPS, replicate 5


title: ENG_MLN_48h_4

description:
m.MLN.Engerix.48.4
Gene expression in lymph nodes 48hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Engerix B, replicate 4


title: ENG_MLN_48h_1

description:
m.MLN.Engerix.48.1
Gene expression in lymph nodes 48hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Engerix B, replicate 1


title: IFA_MLN_48h_1

description:
m.MLN.IFA.48.1
Gene expression in lymph nodes 48hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 48hr, IFA, replicate 1


title: TriFLU-MF59_BL_48h_5

description:
m.blood.TriFluMF59.48.5
Gene expression in blood 48hrs after injection with Fluad.

source_name: Peripheral Blood, 48hr, Fluad, replicate 5


title: ENG_MLN_48h_3

description:
m.MLN.Engerix.48.3
Gene expression in lymph nodes 48hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Engerix B, replicate 3


title: TriFLU-MF59_BL_48h_2

description:
m.blood.TriFluMF59.48.2
Gene expression in blood 48hrs after injection with Fluad.

source_name: Peripheral Blood, 48hr, Fluad, replicate 2


title: ENG_MLN_48h_5

description:
m.MLN.Engerix.48.5
Gene expression in lymph nodes 48hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Engerix B, replicate 5


title: TriFLU-MF59_BL_48h_3

description:
m.blood.TriFluMF59.48.3
Gene expression in blood 48hrs after injection with Fluad.

source_name: Peripheral Blood, 48hr, Fluad, replicate 3


title: TriFLU_BL_48h_5

description:
m.blood.TriFlu.48.5
Gene expression in blood 48hrs after injection with Agrippal.

source_name: Peripheral Blood, 48hr, Agrippal, replicate 5


title: SAL_BL_48h_4

description:
m.blood.saline.48.4
Gene expression in blood 48hrs after injection with saline.

source_name: Peripheral Blood, 48hr, Saline, replicate 4


title: TriFLU_BL_48h_2

description:
m.blood.TriFlu.48.2
Gene expression in blood 48hrs after injection with Agrippal.

source_name: Peripheral Blood, 48hr, Agrippal, replicate 2


title: SAL_BL_48h_1

description:
m.blood.saline.48.1
Gene expression in blood 48hrs after injection with saline.

source_name: Peripheral Blood, 48hr, Saline, replicate 1


title: TriFLU_BL_48h_4

description:
m.blood.TriFlu.48.4
Gene expression in blood 48hrs after injection with Agrippal.

source_name: Peripheral Blood, 48hr, Agrippal, replicate 4


title: SAL_BL_48h_3

description:
m.blood.saline.48.3
Gene expression in blood 48hrs after injection with saline.

source_name: Peripheral Blood, 48hr, Saline, replicate 3


title: PolyIC_BL_48h_5

description:
m.blood.PolyIC.48.5
Gene expression in blood 48hrs after injection with Poly I:C.

source_name: Peripheral Blood, 48hr, Poly I:C, replicate 5


title: ENG_MLN_48h_2

description:
m.MLN.Engerix.48.2
Gene expression in lymph nodes 48hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 48hr, Engerix B, replicate 2


title: PolyIC_BL_48h_3

description:
m.blood.PolyIC.48.3
Gene expression in blood 48hrs after injection with Poly I:C.

source_name: Peripheral Blood, 48hr, Poly I:C, replicate 3


title: TriFLU-MF59_BL_48h_4

description:
m.blood.TriFluMF59.48.4
Gene expression in blood 48hrs after injection with Fluad.

source_name: Peripheral Blood, 48hr, Fluad, replicate 4


title: PERT_BL_48h_2

description:
m.blood.Pertussis.48.2
Gene expression in blood 48hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 48hr, Pentavac SD, replicate 2


title: TriFLU_BL_48h_1

description:
m.blood.TriFlu.48.1
Gene expression in blood 48hrs after injection with Agrippal.

source_name: Peripheral Blood, 48hr, Agrippal, replicate 1


title: TriFLU-MF59_BL_48h_1

description:
m.blood.TriFluMF59.48.1
Gene expression in blood 48hrs after injection with Fluad.

source_name: Peripheral Blood, 48hr, Fluad, replicate 1


title: PERT_BL_48h_5

description:
m.blood.Pertussis.48.5
Gene expression in blood 48hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 48hr, Pentavac SD, replicate 5


title: SAL_BL_48h_5

description:
m.blood.saline.48.5
Gene expression in blood 48hrs after injection with saline.

source_name: Peripheral Blood, 48hr, Saline, replicate 5


title: TriFLU_BL_48h_3

description:
m.blood.TriFlu.48.3
Gene expression in blood 48hrs after injection with Agrippal.

source_name: Peripheral Blood, 48hr, Agrippal, replicate 3


title: PolyIC_BL_48h_2

description:
m.blood.PolyIC.48.2
Gene expression in blood 48hrs after injection with Poly I:C.

source_name: Peripheral Blood, 48hr, Poly I:C, replicate 2


title: PolyIC_BL_48h_1

description:
m.blood.PolyIC.48.1
Gene expression in blood 48hrs after injection with Poly I:C.

source_name: Peripheral Blood, 48hr, Poly I:C, replicate 1


title: PERT_BL_48h_4

description:
m.blood.Pertussis.48.4
Gene expression in blood 48hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 48hr, Pentavac SD, replicate 4


title: PERT_BL_48h_1

description:
m.blood.Pertussis.48.1
Gene expression in blood 48hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 48hr, Pentavac SD, replicate 1


title: PERT_BL_48h_3

description:
m.blood.Pertussis.48.3
Gene expression in blood 48hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 48hr, Pentavac SD, replicate 3


title: SAL_BL_48h_2

description:
m.blood.saline.48.2
Gene expression in blood 48hrs after injection with saline.

source_name: Peripheral Blood, 48hr, Saline, replicate 2


title: PolyIC_BL_48h_4

description:
m.blood.PolyIC.48.4
Gene expression in blood 48hrs after injection with Poly I:C.

source_name: Peripheral Blood, 48hr, Poly I:C, replicate 4


title: LPS_BL_48h_4

description:
m.blood.LPS.48.4
Gene expression in blood 48hrs after injection with LPS.

source_name: Peripheral Blood, 48hr, LPS, replicate 4


title: LPS_BL_48h_1

description:
m.blood.LPS.48.1
Gene expression in blood 48hrs after injection with LPS.

source_name: Peripheral Blood, 48hr, LPS, replicate 1


title: IFA_BL_48h_3

description:
m.blood.IFA.48.3
Gene expression in blood 48hrs after injection with IFA.

source_name: Peripheral Blood, 48hr, IFA, replicate 3


title: IFA_BL_48h_2

description:
m.blood.IFA.48.2
Gene expression in blood 48hrs after injection with IFA.

source_name: Peripheral Blood, 48hr, IFA, replicate 2


title: LPS_BL_48h_3

description:
m.blood.LPS.48.3
Gene expression in blood 48hrs after injection with LPS.

source_name: Peripheral Blood, 48hr, LPS, replicate 3


title: IFA_BL_48h_5

description:
m.blood.IFA.48.5
Gene expression in blood 48hrs after injection with IFA.

source_name: Peripheral Blood, 48hr, IFA, replicate 5


title: ENG_BL_48h_5

description:
m.blood.Engerix.48.5
Gene expression in blood 48hrs after injection with Engerix B.

source_name: Peripheral Blood, 48hr, Engerix B, replicate 5


title: ENG_BL_48h_2

description:
m.blood.Engerix.48.2
Gene expression in blood 48hrs after injection with Engerix B.

source_name: Peripheral Blood, 48hr, Engerix B, replicate 2


title: LPS_BL_48h_2

description:
m.blood.LPS.48.2
Gene expression in blood 48hrs after injection with LPS.

source_name: Peripheral Blood, 48hr, LPS, replicate 2


title: ENG_BL_48h_1

description:
m.blood.Engerix.48.1
Gene expression in blood 48hrs after injection with Engerix B.

source_name: Peripheral Blood, 48hr, Engerix B, replicate 1


title: IFA_BL_48h_4

description:
m.blood.IFA.48.4
Gene expression in blood 48hrs after injection with IFA.

source_name: Peripheral Blood, 48hr, IFA, replicate 4


title: IFA_BL_48h_1

description:
m.blood.IFA.48.1
Gene expression in blood 48hrs after injection with IFA.

source_name: Peripheral Blood, 48hr, IFA, replicate 1


title: ENG_BL_48h_4

description:
m.blood.Engerix.48.4
Gene expression in blood 48hrs after injection with Engerix B.

source_name: Peripheral Blood, 48hr, Engerix B, replicate 4


title: TriFLU-MF59_MU_24h_3

description:
m.muscle.TriFluMF59.24.3
Gene expression in muscle 24hrs after injection with Fluad.

source_name: Muscle, 24hr, Fluad, replicate 3


title: ENG_BL_48h_3

description:
m.blood.Engerix.48.3
Gene expression in blood 48hrs after injection with Engerix B.

source_name: Peripheral Blood, 48hr, Engerix B, replicate 3


title: TriFLU-MF59_MU_24h_1

description:
m.muscle.TriFluMF59.24.1
Gene expression in muscle 24hrs after injection with Fluad.

source_name: Muscle, 24hr, Fluad, replicate 1


title: TriFLU-MF59_MU_24h_2

description:
m.muscle.TriFluMF59.24.2
Gene expression in muscle 24hrs after injection with Fluad.

source_name: Muscle, 24hr, Fluad, replicate 2


title: SAL_MU_24h_4

description:
m.muscle.saline.24.4
Gene expression in muscle 24hrs after injection with saline.

source_name: Muscle, 24hr, Saline, replicate 4


title: PolyIC_MU_24h_5

description:
m.muscle.PolyIC.24.5
Gene expression in muscle 24hrs after injection with Poly I:C.

source_name: Muscle, 24hr, Poly I:C, replicate 5


title: TriFLU_MU_24h_5

description:
m.muscle.TriFlu.24.5
Gene expression in muscle 24hrs after injection with Agrippal.

source_name: Muscle, 24hr, Agrippal, replicate 5


title: SAL_MU_24h_5

description:
m.muscle.saline.24.5
Gene expression in muscle 24hrs after injection with saline.

source_name: Muscle, 24hr, Saline, replicate 5


title: TriFLU_MU_24h_1

description:
m.muscle.TriFlu.24.1
Gene expression in muscle 24hrs after injection with Agrippal.

source_name: Muscle, 24hr, Agrippal, replicate 1


title: SAL_MU_24h_3

description:
m.muscle.saline.24.3
Gene expression in muscle 24hrs after injection with saline.

source_name: Muscle, 24hr, Saline, replicate 3


title: TriFLU_MU_24h_2

description:
m.muscle.TriFlu.24.2
Gene expression in muscle 24hrs after injection with Agrippal.

source_name: Muscle, 24hr, Agrippal, replicate 2


title: TriFLU-MF59_MU_24h_5

description:
m.muscle.TriFluMF59.24.5
Gene expression in muscle 24hrs after injection with Fluad.

source_name: Muscle, 24hr, Fluad, replicate 5


title: TriFLU_MU_24h_3

description:
m.muscle.TriFlu.24.3
Gene expression in muscle 24hrs after injection with Agrippal.

source_name: Muscle, 24hr, Agrippal, replicate 3


title: TriFLU-MF59_MU_24h_4

description:
m.muscle.TriFluMF59.24.4
Gene expression in muscle 24hrs after injection with Fluad.

source_name: Muscle, 24hr, Fluad, replicate 4


title: SAL_MU_24h_2

description:
m.muscle.saline.24.2
Gene expression in muscle 24hrs after injection with saline.

source_name: Muscle, 24hr, Saline, replicate 2


title: SAL_MU_24h_1

description:
m.muscle.saline.24.1
Gene expression in muscle 24hrs after injection with saline.

source_name: Muscle, 24hr, Saline, replicate 1


title: TriFLU_MU_24h_4

description:
m.muscle.TriFlu.24.4
Gene expression in muscle 24hrs after injection with Agrippal.

source_name: Muscle, 24hr, Agrippal, replicate 4


title: PolyIC_MU_24h_4

description:
m.muscle.PolyIC.24.4
Gene expression in muscle 24hrs after injection with Poly I:C.

source_name: Muscle, 24hr, Poly I:C, replicate 4


title: LPS_MU_24h_4

description:
m.muscle.LPS.24.4
Gene expression in muscle 24hrs after injection with LPS.

source_name: Muscle, 24hr, LPS, replicate 4


title: PolyIC_MU_24h_3

description:
m.muscle.PolyIC.24.3
Gene expression in muscle 24hrs after injection with Poly I:C.

source_name: Muscle, 24hr, Poly I:C, replicate 3


title: PERT_MU_24h_1

description:
m.muscle.Pertussis.24.1
Gene expression in muscle 24hrs after injection with Pentavac SD.

source_name: Muscle, 24hr, Pentavac SD, replicate 1


title: IFA_MU_24h_2

description:
m.muscle.IFA.24.2
Gene expression in muscle 24hrs after injection with IFA.

source_name: Muscle, 24hr, IFA, replicate 2


title: PolyIC_MU_24h_1

description:
m.muscle.PolyIC.24.1
Gene expression in muscle 24hrs after injection with Poly I:C.

source_name: Muscle, 24hr, Poly I:C, replicate 1


title: LPS_MU_24h_3

description:
m.muscle.LPS.24.3
Gene expression in muscle 24hrs after injection with LPS.

source_name: Muscle, 24hr, LPS, replicate 3


title: LPS_MU_24h_5

description:
m.muscle.LPS.24.5
Gene expression in muscle 24hrs after injection with LPS.

source_name: Muscle, 24hr, LPS, replicate 5


title: TriFLU-MF59_MLN_24h_5

description:
m.MLN.TriFluMF59.24.5
Gene expression in lymph nodes 24hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Fluad, replicate 5


title: ENG_MU_24h_2

description:
m.muscle.Engerix.24.2
Gene expression in muscle 24hrs after injection with Engerix B.

source_name: Muscle, 24hr, Engerix B, replicate 2


title: LPS_MU_24h_2

description:
m.muscle.LPS.24.2
Gene expression in muscle 24hrs after injection with LPS.

source_name: Muscle, 24hr, LPS, replicate 2


title: IFA_MU_24h_5

description:
m.muscle.IFA.24.5
Gene expression in muscle 24hrs after injection with IFA.

source_name: Muscle, 24hr, IFA, replicate 5


title: IFA_MU_24h_3

description:
m.muscle.IFA.24.3
Gene expression in muscle 24hrs after injection with IFA.

source_name: Muscle, 24hr, IFA, replicate 3


title: PolyIC_MU_24h_2

description:
m.muscle.PolyIC.24.2
Gene expression in muscle 24hrs after injection with Poly I:C.

source_name: Muscle, 24hr, Poly I:C, replicate 2


title: PERT_MU_24h_4

description:
m.muscle.Pertussis.24.4
Gene expression in muscle 24hrs after injection with Pentavac SD.

source_name: Muscle, 24hr, Pentavac SD, replicate 4


title: seedlings OsSHMT_treated2

city: New Delhi

first: Vandna

last: Rai

state: Delhi

address: Pusa campus

department: Genomics

country: India

institute: NRCPB

description: gene expression data from seedlings

hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.

data_processing:
affymetrix-algorithm-name = rma
affymetrix-algorithm-version = 1.0
program-name = Expression Console

label: biotin

organism: Arabidopsis thaliana

source_name: whole seedlings

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

growth_protocol: Arabidopsis seedlings were grown in MS media in hydroponic condition

extract_protocol: Trizol extraction of total RNA was performed according to the manufacturer's instructions.

treatment_protocol: 14-days-old seedlings were exposed to 150mM NaCl for 24hours

tag: age

value: 14 days old

tag: developmental stage

value: seedlings

tag: genotype

value: OsSHMT overexpression

tag: stress

value: NaCl


title: PERT_MU_24h_5

description:
m.muscle.Pertussis.24.5
Gene expression in muscle 24hrs after injection with Pentavac SD.

source_name: Muscle, 24hr, Pentavac SD, replicate 5


title: ENG_MU_24h_5

description:
m.muscle.Engerix.24.5
Gene expression in muscle 24hrs after injection with Engerix B.

source_name: Muscle, 24hr, Engerix B, replicate 5


title: ENG_MU_24h_1

description:
m.muscle.Engerix.24.1
Gene expression in muscle 24hrs after injection with Engerix B.

source_name: Muscle, 24hr, Engerix B, replicate 1


title: LPS_MU_24h_1

description:
m.muscle.LPS.24.1
Gene expression in muscle 24hrs after injection with LPS.

source_name: Muscle, 24hr, LPS, replicate 1


title: IFA_MU_24h_1

description:
m.muscle.IFA.24.1
Gene expression in muscle 24hrs after injection with IFA.

source_name: Muscle, 24hr, IFA, replicate 1


title: PERT_MU_24h_2

description:
m.muscle.Pertussis.24.2
Gene expression in muscle 24hrs after injection with Pentavac SD.

source_name: Muscle, 24hr, Pentavac SD, replicate 2


title: PERT_MU_24h_3

description:
m.muscle.Pertussis.24.3
Gene expression in muscle 24hrs after injection with Pentavac SD.

source_name: Muscle, 24hr, Pentavac SD, replicate 3


title: TriFLU-MF59_MLN_24h_4

description:
m.MLN.TriFluMF59.24.4
Gene expression in lymph nodes 24hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Fluad, replicate 4


title: TriFLU-MF59_MLN_24h_1

description:
m.MLN.TriFluMF59.24.1
Gene expression in lymph nodes 24hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Fluad, replicate 1


title: ENG_MU_24h_4

description:
m.muscle.Engerix.24.4
Gene expression in muscle 24hrs after injection with Engerix B.

source_name: Muscle, 24hr, Engerix B, replicate 4


title: IFA_MU_24h_4

description:
m.muscle.IFA.24.4
Gene expression in muscle 24hrs after injection with IFA.

source_name: Muscle, 24hr, IFA, replicate 4


title: ENG_MU_24h_3

description:
m.muscle.Engerix.24.3
Gene expression in muscle 24hrs after injection with Engerix B.

source_name: Muscle, 24hr, Engerix B, replicate 3


title: TriFLU-MF59_MLN_24h_3

description:
m.MLN.TriFluMF59.24.3
Gene expression in lymph nodes 24hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Fluad, replicate 3


title: TriFLU_MLN_24h_5

description:
m.MLN.TriFlu.24.5
Gene expression in lymph nodes 24hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Agrippal, replicate 5


title: TriFLU-MF59_MLN_24h_2

description:
m.MLN.TriFluMF59.24.2
Gene expression in lymph nodes 24hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Fluad, replicate 2


title: TriFLU_MLN_24h_4

description:
m.MLN.TriFlu.24.4
Gene expression in lymph nodes 24hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Agrippal, replicate 4


title: TriFLU_MLN_24h_2

description:
m.MLN.TriFlu.24.2
Gene expression in lymph nodes 24hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Agrippal, replicate 2


title: seedlings OsSHMT_treated1

description: gene expression data from seedlings

source_name: whole seedlings


title: seedlings WT_control1

description: gene expression data from seedlings

value: WT

value: control


title: seedlings WT_treated2

description: gene expression data from seedlings


title: HIPPO_Control_Br2003

type: genomic

city: Baltimore

first: Stephen

middle: A

last: Semick

state: MD

address: 655 W Baltimore St S

country: USA

institute: University of Maryland School of Medicine

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D07

hyb_protocol: Following manufacturer's protocol

scan_protocol: Following manufacturer's protocol

data_processing:
idat files were imported with minfi then stratified quantile normalized in minfi.
[matrix_processed.csv]  Stratified quantile normalized beta values for tested probes (see publication).
[matrix_signal_intensities.csv]  Unmethylated and methylated signal intensities

molecule: genomic DNA

organism: Homo sapiens

source_name: HIPPO

label_protocol: Following manufacturer's protocol

extract_protocol: Following manufacturer's protocol

value: Plate 5

tag: brnum

value: brain

tag: tissue region

value: HIPPO

tag: disease state (dx)

value: Control

tag: Sex

value: M

tag: race

value: AA


title: HIPPO_Control_Br1611

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-E03

value: F


title: HIPPO_Control_Br1314

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D12


title: HIPPO_Control_Br1185

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D05


title: HIPPO_Control_Br1654

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D04

value: CAUC


title: ERC_Control_Br1537

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D03

source_name: ERC

value: ERC


title: HIPPO_Control_Br1987

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D11


title: ERC_Alzheimer_Br5110

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D02

value: Alzheimer


title: SAL_MLN_24h_5

description:
m.MLN.saline.24.5
Gene expression in lymph nodes 24hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Saline, replicate 5

value: Female

value: draining medial iliac lymph nodes (MLN)

value: saline


title: TriFLU_MLN_24h_1

description:
m.MLN.TriFlu.24.1
Gene expression in lymph nodes 24hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Agrippal, replicate 1

value: Agrippal


title: seedlings OsSHMT_control2

description: gene expression data from seedlings

value: 14 days old

value: seedlings

value: OsSHMT overexpression


title: HIPPO_Control_Br1613

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D09

value: Plate 5


title: seedlings OsSHMT_control1

description: gene expression data from seedlings

value: control


title: SAL_MLN_24h_2

description:
m.MLN.saline.24.2
Gene expression in lymph nodes 24hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Saline, replicate 2


title: SAL_MLN_24h_4

description:
m.MLN.saline.24.4
Gene expression in lymph nodes 24hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Saline, replicate 4


title: TriFLU_MLN_24h_3

description:
m.MLN.TriFlu.24.3
Gene expression in lymph nodes 24hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Agrippal, replicate 3


title: SAL_MLN_24h_1

description:
m.MLN.saline.24.1
Gene expression in lymph nodes 24hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Saline, replicate 1


title: seedlings WT_control2

description: gene expression data from seedlings

value: WT


title: PolyIC_MLN_24h_5

description:
m.MLN.PolyIC.24.5
Gene expression in lymph nodes 24hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Poly I:C, replicate 5

value: PolyIC


title: PolyIC_MLN_24h_4

description:
m.MLN.PolyIC.24.4
Gene expression in lymph nodes 24hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Poly I:C, replicate 4


title: seedlings WT_treated1

description: gene expression data from seedlings

value: NaCl


title: PolyIC_MLN_24h_2

description:
m.MLN.PolyIC.24.2
Gene expression in lymph nodes 24hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Poly I:C, replicate 2


title: PolyIC_MLN_24h_1

description:
m.MLN.PolyIC.24.1
Gene expression in lymph nodes 24hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Poly I:C, replicate 1


title: SAL_MLN_24h_3

description:
m.MLN.saline.24.3
Gene expression in lymph nodes 24hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Saline, replicate 3


title: PolyIC_MLN_24h_3

description:
m.MLN.PolyIC.24.3
Gene expression in lymph nodes 24hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Poly I:C, replicate 3


title: PERT_MLN_24h_5

description:
m.MLN.Pertussis.24.5
Gene expression in lymph nodes 24hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Pentavac SD, replicate 5

value: Pentavac SD


title: ERC_Alzheimer_Br5102

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-D01

value: brain

value: F


title: ERC_Control_Br1214

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C12

value: ERC

value: Control

value: M

value: CAUC


title: ERC_Control_Br1157

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C09

value: AA


title: ERC_Alzheimer_Br5081

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C10

value: Alzheimer


title: ERC_Alzheimer_Br5107

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C03


title: ERC_Control_Br1275

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C05


title: ERC_Control_Br2053

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C08


title: DLPFC_Control_Br1006

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-B09

source_name: DLPFC

value: DLPFC


title: ERC_Control_Br1909

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C02


title: DLPFC_Control_Br2257

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-B12


title: CRB_Control_Br1695

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-B02

source_name: CRB

value: CRB


title: DLPFC_Control_Br1669

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-B05


title: PERT_MLN_24h_1

description:
m.MLN.Pertussis.24.1
Gene expression in lymph nodes 24hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Pentavac SD, replicate 1

value: Female

value: draining medial iliac lymph nodes (MLN)


title: PERT_MLN_24h_4

description:
m.MLN.Pertussis.24.4
Gene expression in lymph nodes 24hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Pentavac SD, replicate 4


title: PERT_MLN_24h_2

description:
m.MLN.Pertussis.24.2
Gene expression in lymph nodes 24hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Pentavac SD, replicate 2


title: LPS_MLN_24h_4

description:
m.MLN.LPS.24.4
Gene expression in lymph nodes 24hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 24hr, LPS, replicate 4

value: LPS


title: DLPFC_Control_Br1160

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-B07

value: Plate 5


title: LPS_MLN_24h_2

description:
m.MLN.LPS.24.2
Gene expression in lymph nodes 24hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 24hr, LPS, replicate 2


title: LPS_MLN_24h_3

description:
m.MLN.LPS.24.3
Gene expression in lymph nodes 24hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 24hr, LPS, replicate 3


title: PERT_MLN_24h_3

description:
m.MLN.Pertussis.24.3
Gene expression in lymph nodes 24hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Pentavac SD, replicate 3


title: DLPFC_Control_Br1137

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C01


title: ERC_Alzheimer_Br5106

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-C07

source_name: ERC


title: IFA_MLN_24h_5

description:
m.MLN.IFA.24.5
Gene expression in lymph nodes 24hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 24hr, IFA, replicate 5

value: IFA


title: IFA_MLN_24h_2

description:
m.MLN.IFA.24.2
Gene expression in lymph nodes 24hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 24hr, IFA, replicate 2


title: CRB_Alzheimer_Br5089

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-A06


title: CRB_Control_Br1157

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-A11


title: LPS_MLN_24h_5

description:
m.MLN.LPS.24.5
Gene expression in lymph nodes 24hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 24hr, LPS, replicate 5


title: LPS_MLN_24h_1

description:
m.MLN.LPS.24.1
Gene expression in lymph nodes 24hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 24hr, LPS, replicate 1


title: IFA_MLN_24h_3

description:
m.MLN.IFA.24.3
Gene expression in lymph nodes 24hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 24hr, IFA, replicate 3


title: CRB_Control_Br1007

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-A04


title: IFA_MLN_24h_4

description:
m.MLN.IFA.24.4
Gene expression in lymph nodes 24hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 24hr, IFA, replicate 4


title: IFA_MLN_24h_1

description:
m.MLN.IFA.24.1
Gene expression in lymph nodes 24hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 24hr, IFA, replicate 1


title: CRB_Alzheimer_Br5081

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
5-A02


title: HIPPO_Control_Br1494

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-H12

source_name: HIPPO

value: Plate 4

value: HIPPO


title: HIPPO_Control_Br1504

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-H11

value: brain


title: ENG_MLN_24h_4

description:
m.MLN.Engerix.24.4
Gene expression in lymph nodes 24hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Engerix B, replicate 4

value: Engerix B


title: ENG_MLN_24h_3

description:
m.MLN.Engerix.24.3
Gene expression in lymph nodes 24hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Engerix B, replicate 3


title: ENG_MLN_24h_2

description:
m.MLN.Engerix.24.2
Gene expression in lymph nodes 24hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Engerix B, replicate 2


title: ENG_MLN_24h_5

description:
m.MLN.Engerix.24.5
Gene expression in lymph nodes 24hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Engerix B, replicate 5


title: TriFLU-MF59_BL_24h_5

description:
m.blood.TriFluMF59.24.5
Gene expression in blood 24hrs after injection with Fluad.

source_name: Peripheral Blood, 24hr, Fluad, replicate 5

value: PBMC

value: Fluad


title: HIPPO_Control_Br909

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-H02

value: Control

value: F


title: HIPPO_Control_Br1669

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-H08

value: CAUC


title: HIPPO_Control_Br1007

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-H06

value: M

value: AA


title: HIPPO_Alzheimer_Br5108

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-H05

value: Alzheimer


title: HIPPO_Control_Br2026

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-H01


title: HIPPO_Control_Br846

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G10


title: HIPPO_Alzheimer_Br5103

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G08


title: HIPPO_Alzheimer_Br5105

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G09


title: HIPPO_Alzheimer_Br5086

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G06


title: HIPPO_Alzheimer_Br5094

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-H09


title: TriFLU-MF59_BL_24h_2

description:
m.blood.TriFluMF59.24.2
Gene expression in blood 24hrs after injection with Fluad.

source_name: Peripheral Blood, 24hr, Fluad, replicate 2

value: Female


title: HIPPO_Control_Br1764

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G04


title: HIPPO_Control_Br2257

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G11


title: HIPPO_Control_Br1160

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G01


title: TriFLU-MF59_BL_24h_3

description:
m.blood.TriFluMF59.24.3
Gene expression in blood 24hrs after injection with Fluad.

source_name: Peripheral Blood, 24hr, Fluad, replicate 3


title: HIPPO_Alzheimer_Br5096

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G02


title: TriFLU_BL_24h_5

description:
m.blood.TriFlu.24.5
Gene expression in blood 24hrs after injection with Agrippal.

source_name: Peripheral Blood, 24hr, Agrippal, replicate 5

value: Agrippal


title: ERC_Alzheimer_Br5108

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-F11

source_name: ERC

value: ERC


title: TriFLU-MF59_BL_24h_4

description:
m.blood.TriFluMF59.24.4
Gene expression in blood 24hrs after injection with Fluad.

source_name: Peripheral Blood, 24hr, Fluad, replicate 4


title: TriFLU_BL_24h_3

description:
m.blood.TriFlu.24.3
Gene expression in blood 24hrs after injection with Agrippal.

source_name: Peripheral Blood, 24hr, Agrippal, replicate 3


title: ERC_Control_Br1099

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-F06


title: HIPPO_Control_Br1960

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-G05


title: ERC_Control_Br1504

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-F09


title: TriFLU_BL_24h_1

description:
m.blood.TriFlu.24.1
Gene expression in blood 24hrs after injection with Agrippal.

source_name: Peripheral Blood, 24hr, Agrippal, replicate 1


title: TriFLU_BL_24h_4

description:
m.blood.TriFlu.24.4
Gene expression in blood 24hrs after injection with Agrippal.

source_name: Peripheral Blood, 24hr, Agrippal, replicate 4


title: SAL_BL_24h_4

description:
m.blood.saline.24.4
Gene expression in blood 24hrs after injection with saline.

source_name: Peripheral Blood, 24hr, Saline, replicate 4

value: saline


title: SAL_BL_24h_5

description:
m.blood.saline.24.5
Gene expression in blood 24hrs after injection with saline.

source_name: Peripheral Blood, 24hr, Saline, replicate 5


title: SAL_BL_24h_3

description:
m.blood.saline.24.3
Gene expression in blood 24hrs after injection with saline.

source_name: Peripheral Blood, 24hr, Saline, replicate 3


title: ERC_Alzheimer_Br5094

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-F04


title: TriFLU-MF59_BL_24h_1

description:
m.blood.TriFluMF59.24.1
Gene expression in blood 24hrs after injection with Fluad.

source_name: Peripheral Blood, 24hr, Fluad, replicate 1


title: PolyIC_BL_24h_2

description:
m.blood.PolyIC.24.2
Gene expression in blood 24hrs after injection with Poly I:C.

source_name: Peripheral Blood, 24hr, Poly I:C, replicate 2

value: PolyIC


title: SAL_BL_24h_1

description:
m.blood.saline.24.1
Gene expression in blood 24hrs after injection with saline.

source_name: Peripheral Blood, 24hr, Saline, replicate 1


title: TriFLU_BL_24h_2

description:
m.blood.TriFlu.24.2
Gene expression in blood 24hrs after injection with Agrippal.

source_name: Peripheral Blood, 24hr, Agrippal, replicate 2


title: ERC_Control_Br1987

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-F12

value: Plate 4


title: SAL_BL_24h_2

description:
m.blood.saline.24.2
Gene expression in blood 24hrs after injection with saline.

source_name: Peripheral Blood, 24hr, Saline, replicate 2


title: ENG_MLN_24h_1

description:
m.MLN.Engerix.24.1
Gene expression in lymph nodes 24hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 24hr, Engerix B, replicate 1

value: draining medial iliac lymph nodes (MLN)


title: PolyIC_BL_24h_3

description:
m.blood.PolyIC.24.3
Gene expression in blood 24hrs after injection with Poly I:C.

source_name: Peripheral Blood, 24hr, Poly I:C, replicate 3


title: PolyIC_BL_24h_5

description:
m.blood.PolyIC.24.5
Gene expression in blood 24hrs after injection with Poly I:C.

source_name: Peripheral Blood, 24hr, Poly I:C, replicate 5


title: PolyIC_BL_24h_4

description:
m.blood.PolyIC.24.4
Gene expression in blood 24hrs after injection with Poly I:C.

source_name: Peripheral Blood, 24hr, Poly I:C, replicate 4


title: ERC_Control_Br1611

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-F02

source_name: ERC

value: brain


title: ERC_Control_Br1054

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-F01


title: ERC_Alzheimer_Br5112

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-E12


title: PolyIC_BL_24h_1

description:
m.blood.PolyIC.24.1
Gene expression in blood 24hrs after injection with Poly I:C.

source_name: Peripheral Blood, 24hr, Poly I:C, replicate 1


title: ERC_Alzheimer_Br5087

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-E07


title: ERC_Control_Br1137

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-E09


title: ERC_Control_Br1003

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-E11


title: ERC_Control_Br1695

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-E06


title: ERC_Control_Br1756

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-E03


title: ERC_Control_Br1669

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-E04


title: DLPFC_Control_Br1297

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-D11

source_name: DLPFC

value: DLPFC


title: DLPFC_Control_Br1214

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-D10


title: DLPFC_Alzheimer_Br5096

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-D09


title: PERT_BL_24h_5

description:
m.blood.Pertussis.24.5
Gene expression in blood 24hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 24hr, Pentavac SD, replicate 5

value: PBMC

value: Pentavac SD


title: DLPFC_Alzheimer_Br5099

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-D05


title: PERT_BL_24h_4

description:
m.blood.Pertussis.24.4
Gene expression in blood 24hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 24hr, Pentavac SD, replicate 4


title: PERT_BL_24h_2

description:
m.blood.Pertussis.24.2
Gene expression in blood 24hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 24hr, Pentavac SD, replicate 2


title: DLPFC_Control_Br1756

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-D03

value: Control


title: IFA_BL_24h_2

description:
m.blood.IFA.24.2
Gene expression in blood 24hrs after injection with IFA.

source_name: Peripheral Blood, 24hr, IFA, replicate 2

value: IFA


title: DLPFC_Control_Br1443

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-E02

value: CAUC


title: DLPFC_Control_Br1185

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-D02

value: F


title: PERT_BL_24h_1

description:
m.blood.Pertussis.24.1
Gene expression in blood 24hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 24hr, Pentavac SD, replicate 1


title: ENG_BL_24h_5

description:
m.blood.Engerix.24.5
Gene expression in blood 24hrs after injection with Engerix B.

source_name: Peripheral Blood, 24hr, Engerix B, replicate 5

value: Engerix B


title: LPS_BL_24h_2

description:
m.blood.LPS.24.2
Gene expression in blood 24hrs after injection with LPS.

source_name: Peripheral Blood, 24hr, LPS, replicate 2

value: LPS


title: IFA_BL_24h_4

description:
m.blood.IFA.24.4
Gene expression in blood 24hrs after injection with IFA.

source_name: Peripheral Blood, 24hr, IFA, replicate 4

value: Female


title: ENG_BL_24h_4

description:
m.blood.Engerix.24.4
Gene expression in blood 24hrs after injection with Engerix B.

source_name: Peripheral Blood, 24hr, Engerix B, replicate 4


title: IFA_BL_24h_1

description:
m.blood.IFA.24.1
Gene expression in blood 24hrs after injection with IFA.

source_name: Peripheral Blood, 24hr, IFA, replicate 1


title: LPS_BL_24h_5

description:
m.blood.LPS.24.5
Gene expression in blood 24hrs after injection with LPS.

source_name: Peripheral Blood, 24hr, LPS, replicate 5


title: IFA_BL_24h_5

description:
m.blood.IFA.24.5
Gene expression in blood 24hrs after injection with IFA.

source_name: Peripheral Blood, 24hr, IFA, replicate 5


title: LPS_BL_24h_3

description:
m.blood.LPS.24.3
Gene expression in blood 24hrs after injection with LPS.

source_name: Peripheral Blood, 24hr, LPS, replicate 3


title: DLPFC_Control_Br1099

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-C10

value: AA


title: DLPFC_Alzheimer_Br5081

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-C08

value: Alzheimer


title: LPS_BL_24h_4

description:
m.blood.LPS.24.4
Gene expression in blood 24hrs after injection with LPS.

source_name: Peripheral Blood, 24hr, LPS, replicate 4


title: DLPFC_Alzheimer_Br5106

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-C09


title: DLPFC_Control_Br1305

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-C07

value: M


title: ENG_BL_24h_1

description:
m.blood.Engerix.24.1
Gene expression in blood 24hrs after injection with Engerix B.

source_name: Peripheral Blood, 24hr, Engerix B, replicate 1


title: PERT_BL_24h_3

description:
m.blood.Pertussis.24.3
Gene expression in blood 24hrs after injection with Pentavac SD.

source_name: Peripheral Blood, 24hr, Pentavac SD, replicate 3


title: DLPFC_Control_Br1069

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-C06

source_name: DLPFC


title: DLPFC_Control_Br1522

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-C03


title: LPS_BL_24h_1

description:
m.blood.LPS.24.1
Gene expression in blood 24hrs after injection with LPS.

source_name: Peripheral Blood, 24hr, LPS, replicate 1


title: DLPFC_Control_Br1539

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-C04


title: IFA_BL_24h_3

description:
m.blood.IFA.24.3
Gene expression in blood 24hrs after injection with IFA.

source_name: Peripheral Blood, 24hr, IFA, replicate 3


title: DLPFC_Control_Br1613

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-C01


title: CRB_Control_Br1756

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-B12

source_name: CRB

value: CRB


title: CRB_Alzheimer_Br5106

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-B11

value: Plate 4


title: ENG_BL_24h_2

description:
m.blood.Engerix.24.2
Gene expression in blood 24hrs after injection with Engerix B.

source_name: Peripheral Blood, 24hr, Engerix B, replicate 2


title: CRB_Alzheimer_Br5109

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-B10


title: TriFLU-MF59_MU_8h_5

description:
m.muscle.TriFluMF59.08.5
Gene expression in muscle 8hrs after injection with Fluad.

source_name: Muscle, 8hr, Fluad, replicate 5

value: muscle

value: Fluad


title: TriFLU-MF59_MU_8h_3

description:
m.muscle.TriFluMF59.08.3
Gene expression in muscle 8hrs after injection with Fluad.

source_name: Muscle, 8hr, Fluad, replicate 3


title: TriFLU-MF59_MU_8h_4

description:
m.muscle.TriFluMF59.08.4
Gene expression in muscle 8hrs after injection with Fluad.

source_name: Muscle, 8hr, Fluad, replicate 4


title: ENG_BL_24h_3

description:
m.blood.Engerix.24.3
Gene expression in blood 24hrs after injection with Engerix B.

source_name: Peripheral Blood, 24hr, Engerix B, replicate 3


title: TriFLU-MF59_MU_8h_2

description:
m.muscle.TriFluMF59.08.2
Gene expression in muscle 8hrs after injection with Fluad.

source_name: Muscle, 8hr, Fluad, replicate 2


title: CRB_Alzheimer_Br5107

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-B07

value: brain


title: CRB_Control_Br1214

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-B09


title: CRB_Control_Br1034

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-B05


title: CRB_Alzheimer_Br5102

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-B04


title: CRB_Control_Br1275

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-A11


title: CRB_Control_Br2003

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-A12


title: CRB_Control_Br1285

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-B02


title: CRB_Control_Br1264

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-A09


title: TriFLU-MF59_MU_8h_1

description:
m.muscle.TriFluMF59.08.1
Gene expression in muscle 8hrs after injection with Fluad.

source_name: Muscle, 8hr, Fluad, replicate 1


title: SAL_MU_8h_2

description:
m.muscle.saline.08.2
Gene expression in muscle 8hrs after injection with saline.

source_name: Muscle, 8hr, Saline, replicate 2

value: saline


title: TriFLU_MU_8h_4

description:
m.muscle.TriFlu.08.4
Gene expression in muscle 8hrs after injection with Agrippal.

source_name: Muscle, 8hr, Agrippal, replicate 4

value: Agrippal


title: CRB_Control_Br1654

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-A07

value: Control


title: CRB_Alzheimer_Br5110

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-A08


title: TriFLU_MU_8h_1

description:
m.muscle.TriFlu.08.1
Gene expression in muscle 8hrs after injection with Agrippal.

source_name: Muscle, 8hr, Agrippal, replicate 1


title: CRB_Alzheimer_Br5088

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-A06


title: TriFLU_MU_8h_5

description:
m.muscle.TriFlu.08.5
Gene expression in muscle 8hrs after injection with Agrippal.

source_name: Muscle, 8hr, Agrippal, replicate 5


title: SAL_MU_8h_4

description:
m.muscle.saline.08.4
Gene expression in muscle 8hrs after injection with saline.

source_name: Muscle, 8hr, Saline, replicate 4


title: SAL_MU_8h_5

description:
m.muscle.saline.08.5
Gene expression in muscle 8hrs after injection with saline.

source_name: Muscle, 8hr, Saline, replicate 5


title: TriFLU_MU_8h_2

description:
m.muscle.TriFlu.08.2
Gene expression in muscle 8hrs after injection with Agrippal.

source_name: Muscle, 8hr, Agrippal, replicate 2


title: SAL_MU_8h_3

description:
m.muscle.saline.08.3
Gene expression in muscle 8hrs after injection with saline.

source_name: Muscle, 8hr, Saline, replicate 3


title: CRB_Control_Br1135

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-A04


title: PolyIC_MU_8h_4

description:
m.muscle.PolyIC.08.4
Gene expression in muscle 8hrs after injection with Poly I:C.

source_name: Muscle, 8hr, Poly I:C, replicate 4

value: PolyIC


title: TriFLU_MU_8h_3

description:
m.muscle.TriFlu.08.3
Gene expression in muscle 8hrs after injection with Agrippal.

source_name: Muscle, 8hr, Agrippal, replicate 3


title: PolyIC_MU_8h_3

description:
m.muscle.PolyIC.08.3
Gene expression in muscle 8hrs after injection with Poly I:C.

source_name: Muscle, 8hr, Poly I:C, replicate 3


title: CRB_Alzheimer_Br5105

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-A03

source_name: CRB

value: CAUC


title: HIPPO_Control_Br1285

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-H10

source_name: HIPPO

value: Plate 3

value: HIPPO


title: HIPPO_Control_Br1023

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-H12


title: PERT_MU_8h_5

description:
m.muscle.Pertussis.08.5
Gene expression in muscle 8hrs after injection with Pentavac SD.

source_name: Muscle, 8hr, Pentavac SD, replicate 5

value: Pentavac SD


title: SAL_MU_8h_1

description:
m.muscle.saline.08.1
Gene expression in muscle 8hrs after injection with saline.

source_name: Muscle, 8hr, Saline, replicate 1

value: Female


title: PolyIC_MU_8h_1

description:
m.muscle.PolyIC.08.1
Gene expression in muscle 8hrs after injection with Poly I:C.

source_name: Muscle, 8hr, Poly I:C, replicate 1


title: PolyIC_MU_8h_5

description:
m.muscle.PolyIC.08.5
Gene expression in muscle 8hrs after injection with Poly I:C.

source_name: Muscle, 8hr, Poly I:C, replicate 5


title: PERT_MU_8h_4

description:
m.muscle.Pertussis.08.4
Gene expression in muscle 8hrs after injection with Pentavac SD.

source_name: Muscle, 8hr, Pentavac SD, replicate 4


title: PolyIC_MU_8h_2

description:
m.muscle.PolyIC.08.2
Gene expression in muscle 8hrs after injection with Poly I:C.

source_name: Muscle, 8hr, Poly I:C, replicate 2


title: PERT_MU_8h_2

description:
m.muscle.Pertussis.08.2
Gene expression in muscle 8hrs after injection with Pentavac SD.

source_name: Muscle, 8hr, Pentavac SD, replicate 2


title: HIPPO_Control_Br1069

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-H08

value: F

value: AA


title: HIPPO_Control_Br2053

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-H06

value: M


title: HIPPO_Control_Br1054

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-H05


title: HIPPO_Alzheimer_Br5075

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-H03

value: Alzheimer


title: HIPPO_Control_Br1275

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-H02


title: HIPPO_Control_Br1137

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-G04


title: HIPPO_Control_Br1537

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-G08


title: HIPPO_Control_Br1006

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-G07


title: ERC_Control_Br1443

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-F12

source_name: ERC

value: ERC


title: ERC_Control_Br2026

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-F09


title: LPS_MU_8h_4

description:
m.muscle.LPS.08.4
Gene expression in muscle 8hrs after injection with LPS.

source_name: Muscle, 8hr, LPS, replicate 4

value: muscle

value: LPS


title: ERC_Control_Br1285

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-F08

value: brain


title: LPS_MU_8h_1

description:
m.muscle.LPS.08.1
Gene expression in muscle 8hrs after injection with LPS.

source_name: Muscle, 8hr, LPS, replicate 1


title: ERC_Control_Br1764

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-F05


title: LPS_MU_8h_2

description:
m.muscle.LPS.08.2
Gene expression in muscle 8hrs after injection with LPS.

source_name: Muscle, 8hr, LPS, replicate 2


title: IFA_MU_8h_4

description:
m.muscle.IFA.08.4
Gene expression in muscle 8hrs after injection with IFA.

source_name: Muscle, 8hr, IFA, replicate 4

value: IFA


title: ERC_Control_Br894

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-F04


title: LPS_MU_8h_3

description:
m.muscle.LPS.08.3
Gene expression in muscle 8hrs after injection with LPS.

source_name: Muscle, 8hr, LPS, replicate 3


title: PERT_MU_8h_3

description:
m.muscle.Pertussis.08.3
Gene expression in muscle 8hrs after injection with Pentavac SD.

source_name: Muscle, 8hr, Pentavac SD, replicate 3


title: IFA_MU_8h_3

description:
m.muscle.IFA.08.3
Gene expression in muscle 8hrs after injection with IFA.

source_name: Muscle, 8hr, IFA, replicate 3


title: IFA_MU_8h_2

description:
m.muscle.IFA.08.2
Gene expression in muscle 8hrs after injection with IFA.

source_name: Muscle, 8hr, IFA, replicate 2


title: HIPPO_Control_Br1695

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-G11

source_name: HIPPO


title: PERT_MU_8h_1

description:
m.muscle.Pertussis.08.1
Gene expression in muscle 8hrs after injection with Pentavac SD.

source_name: Muscle, 8hr, Pentavac SD, replicate 1


title: ERC_Control_Br1006

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-E12


title: ENG_MU_8h_4

description:
m.muscle.Engerix.08.4
Gene expression in muscle 8hrs after injection with Engerix B.

source_name: Muscle, 8hr, Engerix B, replicate 4

value: Engerix B


title: ERC_Control_Br1297

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-E11

value: Control


title: ERC_Alzheimer_Br5100

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-E10


title: LPS_MU_8h_5

description:
m.muscle.LPS.08.5
Gene expression in muscle 8hrs after injection with LPS.

source_name: Muscle, 8hr, LPS, replicate 5


title: ERC_Control_Br1007

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-E08


title: ERC_Alzheimer_Br5075

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-E07


title: ERC_Control_Br2257

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-E06


title: ERC_Control_Br846

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-E04


title: ERC_Alzheimer_Br5078

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-E03


title: ENG_MU_8h_2

description:
m.muscle.Engerix.08.2
Gene expression in muscle 8hrs after injection with Engerix B.

source_name: Muscle, 8hr, Engerix B, replicate 2


title: DLPFC_Control_Br1034

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-D09

source_name: DLPFC

value: DLPFC


title: DLPFC_Alzheimer_Br5110

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-D12


title: DLPFC_Control_Br1156

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-D06


title: TriFLU-MF59_MLN_8h_5

description:
m.MLN.TriFluMF59.08.5
Gene expression in lymph nodes 8hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Fluad, replicate 5

value: draining medial iliac lymph nodes (MLN)

value: Fluad


title: IFA_MU_8h_1

description:
m.muscle.IFA.08.1
Gene expression in muscle 8hrs after injection with IFA.

source_name: Muscle, 8hr, IFA, replicate 1


title: DLPFC_Control_Br846

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-D02

value: Plate 3


title: IFA_MU_8h_5

description:
m.muscle.IFA.08.5
Gene expression in muscle 8hrs after injection with IFA.

source_name: Muscle, 8hr, IFA, replicate 5


title: DLPFC_Alzheimer_Br5088

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-D01

value: CAUC


title: ENG_MU_8h_1

description:
m.muscle.Engerix.08.1
Gene expression in muscle 8hrs after injection with Engerix B.

source_name: Muscle, 8hr, Engerix B, replicate 1

value: Female


title: TriFLU-MF59_MLN_8h_2

description:
m.MLN.TriFluMF59.08.2
Gene expression in lymph nodes 8hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Fluad, replicate 2


title: TriFLU-MF59_MLN_8h_3

description:
m.MLN.TriFluMF59.08.3
Gene expression in lymph nodes 8hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Fluad, replicate 3


title: DLPFC_Control_Br1135

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C12


title: DLPFC_Control_Br1003

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C11

value: F


title: DLPFC_Alzheimer_Br5115

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C09


title: DLPFC_Control_Br1054

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-D05

value: AA


title: ENG_MU_8h_5

description:
m.muscle.Engerix.08.5
Gene expression in muscle 8hrs after injection with Engerix B.

source_name: Muscle, 8hr, Engerix B, replicate 5


title: DLPFC_Control_Br1615

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C08


title: TriFLU_MLN_8h_5

description:
m.MLN.TriFlu.08.5
Gene expression in lymph nodes 8hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Agrippal, replicate 5

value: Agrippal


title: TriFLU-MF59_MLN_8h_1

description:
m.MLN.TriFluMF59.08.1
Gene expression in lymph nodes 8hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Fluad, replicate 1


title: TriFLU_MLN_8h_3

description:
m.MLN.TriFlu.08.3
Gene expression in lymph nodes 8hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Agrippal, replicate 3


title: SAL_MLN_8h_5

description:
m.MLN.saline.08.5
Gene expression in lymph nodes 8hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Saline, replicate 5

value: saline


title: TriFLU_MLN_8h_2

description:
m.MLN.TriFlu.08.2
Gene expression in lymph nodes 8hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Agrippal, replicate 2


title: SAL_MLN_8h_4

description:
m.MLN.saline.08.4
Gene expression in lymph nodes 8hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Saline, replicate 4


title: DLPFC_Control_Br1285

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C07

value: M


title: SAL_MLN_8h_3

description:
m.MLN.saline.08.3
Gene expression in lymph nodes 8hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Saline, replicate 3


title: PolyIC_MLN_8h_5

description:
m.MLN.PolyIC.08.5
Gene expression in lymph nodes 8hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Poly I:C, replicate 5

value: PolyIC


title: DLPFC_Control_Br1113

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C04


title: PolyIC_MLN_8h_4

description:
m.MLN.PolyIC.08.4
Gene expression in lymph nodes 8hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Poly I:C, replicate 4


title: DLPFC_Control_Br1304

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C03

source_name: DLPFC


title: TriFLU_MLN_8h_1

description:
m.MLN.TriFlu.08.1
Gene expression in lymph nodes 8hrs after injection with Agrippal.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Agrippal, replicate 1


title: DLPFC_Alzheimer_Br5108

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C02

value: Alzheimer


title: CRB_Control_Br1099

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-C01

source_name: CRB

value: brain

value: CRB


title: SAL_MLN_8h_2

description:
m.MLN.saline.08.2
Gene expression in lymph nodes 8hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Saline, replicate 2


title: PolyIC_MLN_8h_2

description:
m.MLN.PolyIC.08.2
Gene expression in lymph nodes 8hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Poly I:C, replicate 2


title: PolyIC_MLN_8h_3

description:
m.MLN.PolyIC.08.3
Gene expression in lymph nodes 8hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Poly I:C, replicate 3


title: CRB_Control_Br894

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-B12


title: CRB_Alzheimer_Br5086

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-B11


title: DLPFC_Control_Br1611

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
4-D06

value: Plate 4


title: CRB_Control_Br1137

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-B09

value: Control


title: SAL_MLN_8h_1

description:
m.MLN.saline.08.1
Gene expression in lymph nodes 8hrs after injection with saline.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Saline, replicate 1


title: PERT_MLN_8h_4

description:
m.MLN.Pertussis.08.4
Gene expression in lymph nodes 8hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Pentavac SD, replicate 4

value: Pentavac SD


title: CRB_Control_Br1764

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-B06


title: CRB_Control_Br909

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-B04


title: PolyIC_MLN_8h_1

description:
m.MLN.PolyIC.08.1
Gene expression in lymph nodes 8hrs after injection with Poly I:C.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Poly I:C, replicate 1

value: draining medial iliac lymph nodes (MLN)


title: CRB_Control_Br1109

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-B01


title: CRB_Control_Br1304

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-A10


title: TriFLU-MF59_MLN_8h_4

description:
m.MLN.TriFluMF59.08.4
Gene expression in lymph nodes 8hrs after injection with Fluad.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Fluad, replicate 4

value: Fluad


title: PERT_MLN_8h_5

description:
m.MLN.Pertussis.08.5
Gene expression in lymph nodes 8hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Pentavac SD, replicate 5


title: PERT_MLN_8h_3

description:
m.MLN.Pertussis.08.3
Gene expression in lymph nodes 8hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Pentavac SD, replicate 3


title: LPS_MLN_8h_4

description:
m.MLN.LPS.08.4
Gene expression in lymph nodes 8hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 8hr, LPS, replicate 4

value: LPS


title: PERT_MLN_8h_2

description:
m.MLN.Pertussis.08.2
Gene expression in lymph nodes 8hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Pentavac SD, replicate 2


title: CRB_Control_Br1185

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-A08

value: Plate 3


title: CRB_Control_Br1539

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-A06


title: LPS_MLN_8h_5

description:
m.MLN.LPS.08.5
Gene expression in lymph nodes 8hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 8hr, LPS, replicate 5

value: Female


title: CRB_Alzheimer_Br5096

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-A09

value: CAUC


title: PERT_MLN_8h_1

description:
m.MLN.Pertussis.08.1
Gene expression in lymph nodes 8hrs after injection with Pentavac SD.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Pentavac SD, replicate 1


title: LPS_MLN_8h_3

description:
m.MLN.LPS.08.3
Gene expression in lymph nodes 8hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 8hr, LPS, replicate 3


title: LPS_MLN_8h_1

description:
m.MLN.LPS.08.1
Gene expression in lymph nodes 8hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 8hr, LPS, replicate 1


title: LPS_MLN_8h_2

description:
m.MLN.LPS.08.2
Gene expression in lymph nodes 8hrs after injection with LPS.

source_name: draining medial iliac lymph nodes (MLN), 8hr, LPS, replicate 2


title: CRB_Control_Br846

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-B07

source_name: CRB

value: AA


title: IFA_MLN_8h_5

description:
m.MLN.IFA.08.5
Gene expression in lymph nodes 8hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 8hr, IFA, replicate 5

value: IFA


title: IFA_MLN_8h_3

description:
m.MLN.IFA.08.3
Gene expression in lymph nodes 8hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 8hr, IFA, replicate 3


title: HIPPO_Control_Br1909

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-H11

source_name: HIPPO

value: Plate 2

value: HIPPO


title: HIPPO_Control_Br1443

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-H12

value: M


title: CRB_Control_Br1443

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-A04


title: HIPPO_Alzheimer_Br5087

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-H10

value: Alzheimer

value: F


title: IFA_MLN_8h_2

description:
m.MLN.IFA.08.2
Gene expression in lymph nodes 8hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 8hr, IFA, replicate 2


title: IFA_MLN_8h_4

description:
m.MLN.IFA.08.4
Gene expression in lymph nodes 8hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 8hr, IFA, replicate 4


title: ENG_MLN_8h_4

description:
m.MLN.Engerix.08.4
Gene expression in lymph nodes 8hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Engerix B, replicate 4

value: Engerix B


title: CRB_Control_Br1006

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
3-A05

value: brain

value: CRB


title: IFA_MLN_8h_1

description:
m.MLN.IFA.08.1
Gene expression in lymph nodes 8hrs after injection with IFA.

source_name: draining medial iliac lymph nodes (MLN), 8hr, IFA, replicate 1


title: ENG_MLN_8h_5

description:
m.MLN.Engerix.08.5
Gene expression in lymph nodes 8hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Engerix B, replicate 5


title: ENG_MLN_8h_2

description:
m.MLN.Engerix.08.2
Gene expression in lymph nodes 8hrs after injection with Engerix B.

source_name: draining medial iliac lymph nodes (MLN), 8hr, Engerix B, replicate 2


title: HIPPO_Alzheimer_Br5098

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-H05


title: HIPPO_Alzheimer_Br5107

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-G11


title: HIPPO_Control_Br1522

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-H04

value: Control


title: HIPPO_Control_Br1756

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-G10


title: HIPPO_Control_Br1615

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-H02


title: HIPPO_Alzheimer_Br5095

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-G08


title: TriFLU-MF59_BL_8h_4

description:
m.blood.TriFluMF59.08.4
Gene expression in blood 8hrs after injection with Fluad.

source_name: Peripheral Blood, 8hr, Fluad, replicate 4

value: PBMC


title: HIPPO_Control_Br1297

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-G06


title: HIPPO_Control_Br1034

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-G05


title: HIPPO_Control_Br1135

description:
Postmortem human brain tissue samples from four brain regions in an Alzheimers disease case-control series used to generate Human450k DNA methylation data.
2-H09