title: S202.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.D10

status: Public on Feb 07 2019

type: SRA

city: Santa Cruz

first: Christopher

last: Villarreal

state: CA

address: 1156 Hight Street, Engineering-2 Rm. 501, MS: GENOMICS INSTITUTE

department: Genomics Institute

country: USA

description: PrimaryOrganoidAndPublishedCPM.txt

library_source: transcriptomic

data_processing:
Trim Galore 3.7
HISAT2
subread-1.5.0 function featureCounts
Human GRCh38.79.gtf
The listed genes in the processed data file are human genes mapped to each respective species using the comparative annotation toolkit (PMID: 29884752). Reads are mapped to each species' native genome and quantified based transcript models from comparative annotation toolkit.
The file GSE124299-metadata on processed samples.xlsx  includes the metadata for all samples in this study-- both the new samples listed in this Series and the re-analyzed samples, including accession IDs, when available.
Genome_build: Human: GRCh38.p2; NCBI:GCA_000001405.17
Genome_build: Chimpanzee: Clint_PTRv2 / UCSC: panTro6
Genome_build: Macaque: RheMac8
Supplementary_files_format_and_content: log(CPM+1)

molecule: polyA RNA

organism: Homo sapiens

source_name: iPS-derived cerebral organoid

growth_protocol: Cerebral organoids using Kadoshima et al., 2013 from Sasai lab

extract_protocol:
Fluidigm C1 small IFC (100-5759; 100-6201);  SMARTer® Ultra™ Low RNA Kit (634832)
Nextera XT tagmentation kit (FC-131-096)

tag: tissue

value: iPS-derived cerebral organoid

tag: donorid

tag: cloneid

tag: age (weeks)

tag: datecaptured

tag: Sex

value: Male

tag: organoidid

tag: protocol

value: Kadoshima

tag: captureplate

tag: capturechamber


title: S202.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S64.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S191.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S191.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S191.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S191.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S202.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S201.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S172.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S171.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.G5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S170.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S168.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S167.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.H12

description: PrimaryOrganoidAndPublishedCPM.txt

value: WTC


title: S164.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S166.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S164.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.H10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.H10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.G5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S163.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.D5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.B9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S157.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: TIP-ACR3 at E0.1, biological rep TIP-ACR3L4

type: RNA

city: Seville

first: Patricia

last: Pérez Palacios

address: Dr. Fedriani

country: Spain

institute: Hospital Virgen Macarena

hyb_protocol: Labeled and fragmented cRNA was hybridized to “Affymetrix® GeneChip ATCTob”, developed by the company ATC Biotec (Cambridge, UK) in the GeneChip® Hybridization Oven. GeneChip®  was filled with the premix and pre-incubated for 10 minutes at 45ºC with rotation at 60rpm, and secondly, was filled with the hybridization mix and hybridization was performed for 16 hours at 40ºC with rotation at 60rpm. Washing was performed in the GeneChip® Fluidics Station 450/250 with washing solutions A and B according to the recommendations of the purveyor.

scan_protocol: GeneChip were scanned using the program “GeneChip® Instrument System de Affymetrix®”.

data_processing:
Results of the hybridizations were analyzed with GeneSpring®. Data analyzed were the mean of: HR (HR-2, HR-6 and HR-7), ACR3 (ACR3-5, ACR3-7, ACR3-12 and ACR3-14) and TIP-ACR3 (TIP-ACR3-4 and TIP-ACR3-6).
The test selected was 2way ANOVA (p<0.05; p-value computation Asymptotic). P-values were adjusted by Benjamini-Hochberg method (Benjamini and Hochberg, 1995).
Processed data files include the replicate means and p-value.

label: biotin

molecule: total RNA

organism: Nicotiana tabacum

source_name: TIP-ACR3 exposed to 0.1 mM As(III)

label_protocol: RNA target preparation, labeling and fragmentation were made with GeneChip® 3’ IVT Express Kit (ThermoFisher Scientific).

growth_protocol: Tobacco plants (Nicotiana tabacum cv. Wisconsin) were cultivated in MS medium (Murashine and Skoog, 1962) for a month. After HR were generated, they were transferred to a 50 ml of fresh liquid MSTR medium. Then, tobacco hairy roots were subcultivated every 25–30 d in liquid MSTR medium.

extract_protocol: Plant material was rinsed in sterile distilled water, dried on filter paper and homogenized in liquid N2 to subsequently, isolate RNA. Total RNA extraction was made using QIAcube®Qiagen, following the instructions of the manufacturer. RNA quantity was tested with Agilent RNA 6000 Nano Kit and final concentrations were all adjusted to 500 ng/µL RNA.

treatment_protocol: The transgenic HRs were cultivated in MSTR liquid medium in the dark at 25ºC for 15 days. Then, they were exposed to MS medium containing either 0.1 mM or 1mM NaAsO2 for one week, together with controls cultivated in the absence of As.

tag: cultivar

value: Wisconsin

value: Roots


title: ACR3 at E0.1, biological rep ACR3L5

source_name: ACR3 exposed to 0.1 mM As(III)


title: S148.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: TIP-ACR3 at E0, biological rep TIP-ACR3L4

source_name: TIP-ACR3 exposed to water


title: ACR3 at E0, biological rep ACR3L12

source_name: ACR3 exposed to water


title: ACR3 at E0.1, biological rep ACR3L12


title: TIP-ACR3 at E0.1, biological rep TIP-ACR3L6


title: ACR3 at E0, biological rep ACR3L7


title: HR at E0.1, biological rep HRL7

source_name: HR exposed to 0.1 mM As(III)


title: S148.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: TIP-ACR3 at E0, biological rep TIP-ACR3L6


title: ACR3 at E0.1, biological rep ACR3L7


title: ACR3 at E0, biological rep ACR3L14


title: S148.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: HR at E0.1, biological rep HRL2


title: HR at E0, biological rep HRL2

source_name: HR exposed to water


title: HR at E0, biological rep HRL7


title: HR at E0.1, biological rep HRL6


title: ACR3 at E0.1, biological rep ACR3L14


title: 21NT+TBX3iso2_1

city: London

first: Alan

last: Tuck

address: 339 Windermere Rd

department: Pathology and Laboratory Medicine

country: Canada

institute: Western University

data_processing:
Raw reads were uploaded to Basespace (https://basespace.illumina.com/) and imported into Galaxy software (https://usegalaxy.org).
The FastqGroomer tool within Galaxy was used to prepare the files for alignment, and the TopHat tool within Galaxy was used to align the FASTQ files to the reference genome (Hg19) using the default parameters, except that the maximum number of alignments was capped at 10.
Aligned sequences were imported as .bam files into Partek Genomics Suite (PGS; http://www.partek.com/pgs) software and analyzed using the RNA-Seq analysis workflow.
Gene reads were normalized for transcript length using the RPKM normalization algorithm, and differentially expressed genes between TBX3iso1 or TBX3iso2 compared to empty vector were determined using ANOVA statistical tests.
For each comparison, final gene lists were created using a minimum fold change cut-off of 1.5-fold, and a false discovery rate (FDR) of 0.05.
Genome_build: HG19

source_name: Stably transfected breast cancer cell line

growth_protocol: Cells were maintained in αMEM media supplemented with 1mM L-glutamine, 1µg/mL insulin, 12.5ng/mL EGF, 2.8µM hydrocortisone, 10mM HEPES, 1mM sodium pyruvate, 0.1mM non-essential amino acids, 50µg/mL gentamycin sulfate, 500µM G418 (selection agent), and 10% FBS. All reagents were obtained from Wisent Inc.

extract_protocol:
Cells were grown to 80% confluence and RNA was isolated using the RNeasy Mini Kit (Qiagen, 74104) incorporating DNase I digestion (Qiagen, 79254). RNA integrity of samples was assessed using an Agilent bioanalyzer.
Illumina TruSeq stranded mRNA libraries were prepared using standard Illumina protocols.
Detailed Illumina protocol can be found here: https://support.illumina.com/content/dam/illumina-support/documents/documentation/chemistry_documentation/samplepreps_truseq/truseq-stranded-mrna-workflow/truseq-stranded-mrna-workflow-reference-1000000040498-00.pdf

treatment_protocol: 21NT parental cell lines underwent authentication testing by Idexx Radil (Case No. 20250-2013). Cells were transfected with an empty vector (EV), TBX3iso1, or TBX3iso2 construct within a pcDNA3.1 vector (Invitrogen, V79020) as previously described (Krstic et al. 2016, BMC Cancer).

tag: treatment

value: TBX3iso2 overexpression


title: 21NT+TBX3iso1_2

value: TBX3iso1 overexpression


title: LoVo input

city: Cleveland Heights

first: Peter

last: Scacheri

state: OH

address: 10900 Euclid Ave; BRB 647

institute: Case Western Reserve University

library_source: genomic

data_processing:
Adapter and quality trimming of ChIP-Seq reads was done using FASTX Toolkit 0.0.13. Reads below 25bp in length or reads with Phred quality scores below 20 were discarded
ChIP-seq reads were aligned to hg19 with Bowtie2 version 2.2.6, using default parameters.
Potential PCR duplicates were removed from aligned ChIP Seq reads files
ChIP-Seq peaks were called using MACS v2.
Genome_build: hg19
Supplementary_files_format_and_content: ChIP-Seq WIG tracks were generated using Deeptools 3.1.2 and normalized using the RPGC option

molecule: genomic DNA

source_name: CRC cell line

growth_protocol: LoVo cells were grown in media supplemented as previously described; COLO205-derived subclones were grown in RPMI-1640 supplemented with 10% fetal bovine serum and 1% penicillin/streptomycin for approximately 2.5 months, then subcloned and expanded.

extract_protocol:
Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody.
ChIP-Seq libraries were prepared with NEB reagents as previously described. Briefly, DNA was end-repaired and the blunt, phosphorylated ends were treated to yield a protruding 3- 'A' base for ligation of Illumina's adapters which have a single 'T' base overhang at the 3’ end. After adapter ligation DNA was PCR amplified with Illumina primers and library fragments of ~250 bp were band isolated from an agarose gel.

tag: sample type

value: LoVo cells

tag: chip antibody


title: LoVo H3K27ac ChIP Seq

value: rabbit anti-H3K27ac (Abcam #4729).


title: ACR3 at E0, biological rep ACR3L5


title: HR at E0, biological rep HRL6


title: 21NT+EV_2

value: empty vector


title: 21NT+TBX3iso1_1


title: 21NT+EV_1


title: S98.G6

description: PrimaryOrganoidAndPublishedCPM.txt

value: Female


title: S98.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.G5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: 21NT+TBX3iso2_2


title: S98.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S98.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S8.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.D5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S148.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.D5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S73.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S146.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.F5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S144.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S143.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S79.C1

description: PrimaryOrganoidAndPublishedCPM.txt

organism: Pan troglodytes


title: S142.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S79.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S79.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S79.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S79.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S79.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.B9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S14.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S14.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S14.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S14.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S14.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S142.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S14.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.B9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S13.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.H6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.H2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.G5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.F6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S78.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.E6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.G1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.B2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.A8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S11.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.F8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.F3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.E7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.E4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.F1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.E1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.D9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.D5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.D7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.D3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.C3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.D2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.C2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.B7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S77.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.H12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.B1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.C1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.A9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.A6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.F4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.G6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.F12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.F7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.H11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.A2

description: PrimaryOrganoidAndPublishedCPM.txt


title: S101.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.G10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.E3

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.E8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.F9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.E9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.D8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.D5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.C9

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.E12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.D4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.C7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.D11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.D6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.A12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.A10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.C5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.C8

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.D10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.C4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.C6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.C12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.E5

description: PrimaryOrganoidAndPublishedCPM.txt


title: K562_NHS_NELFE_ChIP_Rep1

city: Freiburg

first: Barbara

last: Hummel

address: Stübeweg 51

country: Germany

institute: Max Planck Institute of Immunobiology and Epigenetics

data_processing:
ChIP-seq reads were aligned to the human genome build hg38 using Bowtie2. Duplicate and discordant reads were removed. Peak calling was done with MACS2 using "--keep-dup all", "--nomodel", "--extsize" and "--broad". Gene annotations and transcript start site (TSS) information for human genes were from taken from Gencode annotation release 26.
Cutadapt was used to cut adapter from sequenced reads. Filtered reads were first mapped to a single copy of ribosomal DNA to remove the contribution of nascent RNAs from ribosomal genes. The remaining reads were mapped to human genome build hg38 using Bowtie2 using default parameters. PRO-seq libraries were normalized using 3’-end of long genes as described by Mahat et al., 2016
DESeq2 was used to identify differentially express.ed genes upon heat shock. Differential gene expression was done using DESeq2
Genome_build: hg38

growth_protocol: Flp-In T-REx 293 were cultured in DMEM High Glucose supplemented with 10% FBS. K562 cells were cultured in IMDM supplemented with 10% FBS.

extract_protocol: Cells were fixed using 1% methanol-free formaldehyde (CAT no) in DMEM (HEK293) or IMDM (K562) at room temperature for 10 minutes, followed by 5 minutes blocking in 0.125M glycine. Cells were washed twice with ice-cold PBS. Cell pellet was resuspended in Farnham Buffer (5 mM PIPES pH 8; 85 mM KCl; 0.5% Igepal). Cell suspensions were sonicated in 1ml Covaris tubes using Covaris S220 with the following settings: Peak Power=75; Duty Factor=2; Cycles/Burst=200. Sonication time varied from cell type to cell type; K562=~2.5minutes and HEK293=~3minutes. Isolated nuclei were washed with Farnham Buffer and suspended in shearing buffer (10 mM Tris-HCl pH 8; 0.1% SDS; 1 mM EDTA). Chromatin was sheared by sonication in 1ml Covaris tubes using the following settings: Peak Power=140; Duty Factor=5; Cycles/Burst=200, Time=25-30 minutes. Debris was removed by centrifugation. A DNA fragment-size distribution of 200-600bp was considered as ideal chromatin for ChIP. Chromatin was diluted 1:1 with IP buffer to achieve a final 0.05% SDS concentration. 200 μg of good quality chromatin was used for immunoprecipitation. Protein A or G magnetic beads (CAT) were incubated (rotated) with 5-10μg of antibody for 6h at 4ºC. This bead-antibody complex was then incubated overnight at 4ºC with chromatin.

treatment_protocol: Cycloheximide and NSC624206 (Ub-E1 inhibitor) were used as pretreatments prior to Heat shock, always using an appropriate solvent control. To inhibit translation, 30ug/ml Cycloheximide were used for 1.5h. To inhibit ubiquitin-activating enzyme E1 (Ub-E1 inhibitor), 2uM NSC624206 was used for 0.5h.

value: NELFE Sigma A81919

tag: condition

value: Non Heat-Shock


title: S76.C11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B8

description: PrimaryOrganoidAndPublishedCPM.txt


title: K562_NHS_NELFA_ChIP_Rep1

value: NELFA Santa Cruz sc-23599


title: K562_HS_NELFE_ChIP_Rep1

value: Heat-Shock


title: S76.C10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B6

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B5

description: PrimaryOrganoidAndPublishedCPM.txt


title: S10.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.B10

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.A11

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.G6.repeat

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.A4

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.G3.repeat

description: PrimaryOrganoidAndPublishedCPM.txt


title: S76.A5

description: PrimaryOrganoidAndPublishedCPM.txt


title: T6 VIP_4

city: Stanford

first: Ryan

last: Hamnett

state: California

address: James H. Clark Center, 318 Campus Drive

department: Neurosurgery

country: United Kingdom

institute: Stanford University

hyb_protocol: cDNA was hybridised to a MouseWG-6 v2 BeadChip overnight using standard Illumina hybridization protocol. After washing, hybridisation was visualised by staining with streptavidin-Cy3

scan_protocol: Scanned using a Bead Array Reader

data_processing: Raw data were loaded into R using the Bioconductor lumi package and segregated into pairs (such as CT12 Vehicle vs. CT10) for later comparison. These subgroups were then filtered using the detection p-value from Illumina to exclude any non-expressed probes, defined as not being significantly different (p > 0.01) from negative controls. Data were then transformed using the Variance Stabilisation Transformation (VST) and then normalized using quantile normalisation

organism: Mus musculus

source_name: SCN slice, VIP treated, CT16 harvest

label_protocol: Total RNA was amplified using the Ovation Pico WTA v2 kit (NuGEN Technologies), and the resulting cDNA was fragmented and biotinylated using the BiotinIL kit (NuGEN Technologies).

growth_protocol: SCN slices were dissected and maintained for 7 days at 37°C, 5% CO2, then transferred to 35 mm culture dishes containing 1.2 ml air medium (see Recording Medium in Hastings et al. 2005, Methods in Enzymology) with 100 µM luciferin for bioluminescence recording

extract_protocol: Slices were stored in RNALater before RNA extraction. RNA was extracted using Qiagen's RNeasy Micro kit. QC was performed using an Agilent Bioanalyzer 2100

treatment_protocol: Slices were treated at CT10 with either vehicle (air medium) or 1 µM VIP

tag: strain

tag: age

value: SCN slice


title: T6 VIP_1

tag: tissue


title: T6 VIP_3


title: T6 VIP_2


title: S75.E2.repeat

description: PrimaryOrganoidAndPublishedCPM.txt

value: iPS-derived cerebral organoid

tag: donorid


title: T2 VIP_3

source_name: SCN slice, VIP treated, CT12 harvest


title: T2 VIP_1


title: T2 Veh_4

source_name: SCN slice, vehicle treated, CT12 harvest


title: G4_GHRep3 Sample_639_PA_7_1

city: Ashburn

first: Pavan

middle: K

last: Agrawal

state: VA

address: 19700 Helix Dr

institute: HHMI Janelia Research Campus

description:
G4_GHRep3
RNAseq_edgeR_234_TPM.txt

data_processing:
alignment - STAR was used for RNAseq data and Bowtie for ChIPSeq data
calling - Rsubread and edgeR were used for RNAseq and DiffReps and ngs.plot for ChIPseq
CuffDiff was used to detect differentially spliced RNA transcripts
Genome_build: Flybase release 6.02, NCBI GCA_000001215.4
Supplementary_files_format_and_content: *_hm1.txt files as generated by ngs.plot are tab delimited text, with columns for (a) flybase FBgn, (b) flybase gene name, © flybase transcript id, (d) strand, and 101 columns with normalized counts of marks in 101 parts of gene. *_dr4.txt files are generated by diffReps version: 1.55.4 with parameters shown in initial comments of each tab-delimited file. Diffreps supports only numbered chromosomes, so the mapping X->chr1, 2L->chr2, 2R->chr3,3L->chr4,3R->chr5,4->chr6, and Y -> chr7 was used.

organism: Drosophila melanogaster

growth_protocol: Drosophila melanogaster in a Canton-S background were reared on standard fly food at 25oC at 65% relative humidity with a 12/12 h light/dark cycle.

extract_protocol:
For each ChIP-seq reaction ~10,000-15,000 mini-INTACT isolated bead-bound nuclei were processed using Low Cell # ChIP kit (Diagenode: C01010070) as per manufacturer’s instructions. In brief, nuclei were fixed in 1% formaldehyde for 2 minutes, immediately quenched with Glycine and then lysed using nuclear lysis buffer with protease inhibitor cocktail at room temperature for 5 minutes. PBS was added to dilute the lysate-bead mix and loaded in AFA tubes (Covaris Inc.: 520045) for sonication. Ultra-sonicator (Covaris Inc.: E220) was used to sheer chromatin to ~200 bp length and chromatin was recovered from the supernatant after magnetic separation.
We isolated cell bodies of dopaminergic neurons using Fluorescence Activated Cell Sorting (FACS) during the flies’ morning activity peak. In brief, brains were dissected from socially-isolated or group-housed flies expressing membrane-tagged GFP and nuclear tdTomato in their dopaminergic neurons. The flies were obtained by crossing flies carrying TH-GAL4 with a stock carrying pJFRC105-10XUAS-IVS-nlstdTomato in VK40 (gift of Barret D. Pfeiffer,  Rubin Lab, Janelia Research Campus) and pJFRC29-10XUAS-IVS-myr::GFP-p10 in AttP40. To account for possible manual bias, dissectors switched their handling of group- or single-housed flies in each session. Dissected brains were digested using Liberase DH (Roche: 5401054001), manually triturated using glass pipettes, and filtered using a Falcon 35 μm cell strainer (Corning: 352235) before sorting. Approximately 1500 dopaminergic neurons were obtained from approximately 30 brains using a BD FACSAria II sorter (BD Biosciences, USA). Total RNA was extracted using the Arctus, PicoPure RNA Isolation Kit (Thermo Fisher Scientific: 12204-01), ERCC spike-in controls were added and cDNA libraries from this material were prepared.
ChIP-seq libraries for sequencing were prepared using MicroPlex Library Preparation kit (Diagenode: C05010012) as per manufacturer’s instruction.
Ovation RNA-seq System V2 (Nugen: 7102) as per manufacturer’s instructions.

treatment_protocol: For social-isolation and group-housing experiments 24-48 hour-old males of a given genotype were housed individually or in groups of 20 in standard Drosophila vials (2.6 cm diameter X 9.3 cm high) for 4 days.

value: canton-S

value: 4 days group-housing (20 males/vial)


title: T2 VIP_4


title: T2 Veh_2


title: T0_5

source_name: SCN slice, untreated, CT10 harvest


title: T0_3


title: T2 Veh_3


title: S75.C3.repeat

description: PrimaryOrganoidAndPublishedCPM.txt

tag: cloneid

value: Male

value: Kadoshima


title: T2 Veh_1


title: S3_SHRep2 Sample_638_PA_6_1

description:
S3_SHRep2
RNAseq_edgeR_234_TPM.txt

value: 4 days single-housing (1 male/vial)


title: T2 VIP_2


title: S4_SHRep3 Sample_640_PA_8_1

description:
S4_SHRep3
RNAseq_edgeR_234_TPM.txt


title: S75.C2.repeat

description: PrimaryOrganoidAndPublishedCPM.txt

tag: age (weeks)


title: S75.G1

description: PrimaryOrganoidAndPublishedCPM.txt

tag: datecaptured


title: S76.A6

description: PrimaryOrganoidAndPublishedCPM.txt

tag: Sex


title: G3_GHRep2 Sample_637_PA_5_1

description:
G3_GHRep2
RNAseq_edgeR_234_TPM.txt


title: S75.B6.repeat

description: PrimaryOrganoidAndPublishedCPM.txt

tag: organoidid


title: S75.B5.repeat

description: PrimaryOrganoidAndPublishedCPM.txt

tag: protocol


title: S76.A10

description: PrimaryOrganoidAndPublishedCPM.txt

tag: captureplate


title: S75.C7

description: PrimaryOrganoidAndPublishedCPM.txt

tag: capturechamber


title: H3K9me3_S_input_ChIPseq_rep2 H3K9me3_Th_S_Input_B_1

description:
H3K9me3_S_input_ChIPseq_rep2
H3K9me3_S_B.tss_hm1.txt
H3K9me3_S_B.tes_hm1.txt
H3K9me3_dr4.txt
H3K9me3_S_B.genebody_hm1.txt


title: G2_GHRep1 Sample_635_PA_3_1

description:
G2_GHRep1
RNAseq_edgeR_234_TPM.txt


title: S75.B4.repeat

description: PrimaryOrganoidAndPublishedCPM.txt


title: T0_4


title: S75.B2.repeat

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9me3_S_ChIPseq_rep2 H3K9me3_Th_S_ChIP_B2_1

description:
H3K9me3_S_ChIPseq_rep2
H3K9me3_S_B.tss_hm1.txt
H3K9me3_S_B.tes_hm1.txt
H3K9me3_dr4.txt
H3K9me3_S_B.genebody_hm1.txt


title: T0_1


title: H3K9me3_S_input_ChIPseq_rep1 H3K9me3_Th_S_Input_A_1

description:
H3K9me3_S_input_ChIPseq_rep1
H3K9me3_S_A.tss_hm1.txt
H3K9me3_S_A.tes_hm1.txt
H3K9me3_dr4.txt
H3K9me3_S_A.genebody_hm1.txt


title: S75.B3.repeat

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9me3_S_ChIPseq_rep1 H3K9me3_Th_S_ChIP_A2_1

description:
H3K9me3_S_ChIPseq_rep1
H3K9me3_S_A.tss_hm1.txt
H3K9me3_S_A.tes_hm1.txt
H3K9me3_dr4.txt
H3K9me3_S_A.genebody_hm1.txt


title: S75.A7

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.A6.repeat

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9me3_S_ChIPseq_rep1 H3K9me3_Th_S_ChIP_A_1


title: S75.A5.repeat

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9me3_GH_input_ChIPseq_rep2 H3K9me3_Th_Gp_Input_B_1

description:
H3K9me3_GH_input_ChIPseq_rep2
H3K9me3_Gp_B.tss_hm1.txt
H3K9me3_Gp_B.tes_hm1.txt
H3K9me3_dr4.txt
H3K9me3_Gp_B.genebody_hm1.txt


title: H3K9me3_GH_input_ChIPseq_rep1 H3K9me3_Th_Gp_Input_A_1

description:
H3K9me3_GH_input_ChIPseq_rep1
H3K9me3_Gp_A.tss_hm1.txt
H3K9me3_Gp_A.tes_hm1.txt
H3K9me3_dr4.txt
H3K9me3_Gp_A.genebody_hm1.txt


title: S74.H10

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9me3_GH_ChIPseq_rep1 H3K9me3_Th_Gp_ChIP_A2_1

description:
H3K9me3_GH_ChIPseq_rep1
H3K9me3_Gp_A.tss_hm1.txt
H3K9me3_Gp_A.tes_hm1.txt
H3K9me3_dr4.txt
H3K9me3_Gp_A.genebody_hm1.txt


title: H3K9me3_GH_ChIPseq_rep2 H3K9me3_Th_Gp_ChIP_B_1

description:
H3K9me3_GH_ChIPseq_rep2
H3K9me3_Gp_B.tss_hm1.txt
H3K9me3_Gp_B.tes_hm1.txt
H3K9me3_dr4.txt
H3K9me3_Gp_B.genebody_hm1.txt


title: S74.G12

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.A3.repeat

description: PrimaryOrganoidAndPublishedCPM.txt


title: S75.D1

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9_K14ac_S_input_ChIPseq_rep2 H3K9_K14ac_Th_S_Input_B_1

description:
H3K9_K14ac_S_input_ChIPseq_rep2
H3K9ac_K14ac_S_B.tss_hm1.txt
H3K9ac_K14ac_S_B.tes_hm1.txt
H3K9ac_K14ac_dr4.txt


title: S74.F11

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9me3_S_ChIPseq_rep2 H3K9me3_Th_S_ChIP_B_1


title: S74.F10

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9_K14ac_S_ChIPseq_rep1 H3K9_K14ac_Th_S_ChIP_A_1

description:
H3K9_K14ac_S_ChIPseq_rep1
H3K9ac_K14ac_S_A.tss_hm1.txt
H3K9ac_K14ac_S_A.tes_hm1.txt
H3K9ac_K14ac_dr4.txt


title: S74.D12

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9me3_GH_ChIPseq_rep2 H3K9me3_Th_Gp_ChIP_B2_1


title: H3K9_K14ac_GH_input_ChIPseq_rep1 H3K9_K14ac_Th_Gp_Input_A_1

description:
H3K9_K14ac_GH_input_ChIPseq_rep1
H3K9ac_K14ac_Gp_A.tss_hm1.txt
H3K9ac_K14ac_Gp_A.tes_hm1.txt
H3K9ac_K14ac_dr4.txt


title: S74.B12

description: PrimaryOrganoidAndPublishedCPM.txt


title: H3K9_K14ac_S_ChIPseq_rep2 H3K9_K14ac_Th_S_ChIP_B_1

description:
H3K9_K14ac_S_ChIPseq_rep2
H3K9ac_K14ac_S_B.tss_hm1.txt
H3K9ac_K14ac_S_B.tes_hm1.txt
H3K9ac_K14ac_dr4.txt


title: H3K9_K14ac_GH_ChIPseq_rep2 H3K9_K14ac_Th_Gp_ChIP_B_1

description:
H3K9_K14ac_GH_ChIPseq_rep2
H3K9ac_K14ac_Gp_B.tss_hm1.txt
H3K9ac_K14ac_Gp_B.tes_hm1.txt
H3K9ac_K14ac_dr4.txt


title: H3K9_K14ac_GH_ChIPseq_rep1 H3K9_K14ac_Th_Gp_ChIP_A_1

description:
H3K9_K14ac_GH_ChIPseq_rep1
H3K9ac_K14ac_Gp_A.tss_hm1.txt
H3K9ac_K14ac_Gp_A.tes_hm1.txt
H3K9ac_K14ac_dr4.txt


title: S2_SHRep1 Sample_636_PA_4_1

description:
S2_SHRep1
RNAseq_edgeR_234_TPM.txt


title: S75.A1

description: PrimaryOrganoidAndPublishedCPM.txt


title: S74.H12

description: PrimaryOrganoidAndPublishedCPM.txt