title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbm3 knockdown (T1257), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GGCGATAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pogz knockdown (T1255), replicate 2

status: Public on Feb 02 2017

type: SRA

city: Toronto

first: Ulrich

last: Braunschweig

state: Ontario

address: 160 College Street

department: Donnelly Centre

country: Canada

institute: University of Toronto

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: ATCCAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab

library_source: transcriptomic

data_processing:
CASAVA 1.8 was used for base calling.
Fastq files contain demultiplexed reads which were assigned to the appropriate treatment by matching to expected forward and reverse barcodes (sequenced in dedicated reads; not supplied).
Forward and reverse event reads were mapped to custom junction libraries representing all expected splice variants (supplied as processed files), using bowtie with settings --best -v 3 -k 1 --trim3 26 --trim5 20. Trimming was done to remove lower-quality, uninformative ends and because forward reads had a missing base call at position 11 due to a power outage. Junction libraries were first constructed from NCBIm37/mm9 gene annotations, and then refined based on the results of de novo mapping of the reads from one full Illumina lane from each cell line using tophat (default settings with -i 40 and providing Ensembl transcript annotations for NCBIm37), after quality trimming (minimum MAPQ of 33) from the 3'-end with the fastx toolkit. Mapped reads were counted per junction.
Alternative splicing analysis: Percent-spliced-in (PSI) values were calculated for each alternative exon, or part thereof in the case of alternative 5'-/3'-splice sites ('event'), from read tallies as follows: PSI was calculated independently from forward and reverse reads as the percentage of reads supporting inclusion divided by the total number of reads for the event. For alternative 5'/3'-ss events that were part of an alternative exon (Foxm1.A2, Mta1.A1, Uspl1.A3), the PSI was instead calculated with reference to the total reads supporting inclusion of that exon in order to assess independent regulation of alternative splice site usage. Only the read direction in which all reads unambiguously supported either inclusion or exclusion of an event was used, and the average if that applied for both. Exploratory analysis revealed that PSI values showed low-level batch effects per 96-well plate which we moderated by subtracting a weighted plate median in which negative controls (siNT and mock treatment) were given 20x more weight than other samples. To derive variances, and because PSI values are not nearly normally distributed but roughly follow a beta distribution, we elected to fit a beta distribution to each pair of replicate treatments, as well as to all negative controls from both replicates, using maximum-likelihood fitting as implemented in the fitdistr() function from the R package MASS {Venables & Ripley, Modern Applied Statistics with S (2002)}. Iterative optimization of shape parameters was initiated with settings x=PSI, shape1=1, shape2=1, method=”L-BFGS-B”, lower=0.01, and upper=mean number of reads supporting each PSI value. A modified Strictly Standardized Mean Difference (SSMD {Zhang, Genomics (2007)}) was then calculated based on the formula: SSMD = (μt – μc)/SQRT(vart + varc) where μt and μc are the means (corresponding to the PSI), and vart and varc the variances of the beta distributions fitted to the treatment replicates and negative controls, respectively. Events for which not all reads from at least one direction were informative (Mff.A2, Tead1.A2) were excluded from further analysis, as were events in individual treatments with less than 20 reads in one or both replicates (~9% of all event x treatment combinations). Additionally, the following events were removed from further splicing analysis: expression only events or constitutive exons, Fgf4, Gapdh, Srpk2, Srrm4; events with consistently low read counts: Atg13.A1, H2afy.A2, Tcf7l1 (N2A only), Dnmt3b (N2A only); or because measured inclusion was biased by differential length of isoforms:, Fgfr1, Sall4.
Expression analysis: Read counts from all splice variants of each gene were used to estimate relative mRNA expression levels, reads per million reads (RPMs). Differential expression analysis based on raw read counts was performed using the generalized linear models workflow from the R package edgeR. Plate, position (edge/interior) and treatment were used as design factors (where all treatments of each type of control were treated as replicates.) Models fitted using estimateDisp() to estimate the common, trended, and tag-wise dispersion for the CGR8 and N2A data separately. Subsequently, differences attributable to treatment, plate, or position contrasts were extracted with glmLRT() and represented as log2-fold changes with associated FDR. Fold-changes for treatments are relative to the siNT and mock-treatment controls.
Genome_build: NCBIm37/mm9
Supplementary_files_format_and_content: Processed files are either tab-delimited  tables (.tab) or FASTA files (.fa). KnockdownAnnotation.tab contains treatment annotations and well/plate positions. ScreenJuncUp.20-77.tab and ScreenJuncDn.20-77.tab contain the custom junction upstream and downstram junction libraries, respectively, and ScreenEvent_junctions.tab contains the information which junctions were used to calculate PSI for each event. PSI.SSMD.CGR8.tab and PSI.SSMD.N2A.tab contain raw PSI of each replicate and final SSMD. Reads_perEvent_CGR8.tab and Reads_perEvent_N2A.tab contain raw read counts on which expression analyis was based, and Expression.CGR8.treatments.tab and Expression.N2A.treatments.tab contain modeled relative abundance and fold-change with associated FDR for each treatment type.

molecule: total RNA

organism: Mus musculus

source_name: Embryonic stem cells

growth_protocol: CGR8 mouse embryonic stem cells (ESCs) were cultured as described previously on gelatin-coated plates (Gabut et al., Cell (2011), Han  et al., Nature (2013)). Mouse neuroblastoma (N2A) cells were grown in DMEM supplemented with 10% FBS, sodium pyruvate, MEM non-essential amino acids, and penicillin/streptomycin. All cell lines were maintained at 37°C with 5% CO2.

extract_protocol:
Forty-eight hours post-transfection, total RNA were purified from cultured cells using RNeasy Plus 96 Kit (Qiagen), as per the manufacturer’s instructions.
For each sample, a multiplex RT-PCR assay was first applied to simultaneously amplify 50 AS and/or expression events in a single reaction. The multiplex RT-PCR reaction was carried out in 96-well plates using the OneStep RT-PCR kit (Qiagen) as recommended by the manufacturer, with the following changes: reactions were performed in a volume of 20 uL with 2 uL of the purified total RNA as input, and a mixture of 50 pairs of primers was added to each reaction with a final concentration of 0.25 uM for each individual forward and reverse primer. Four identical Veriti 96-well Thermal Cyclers (Applied Biosystems) were used with the following conditions: 50°C for 30 minutes, 95°C for 15 minute, 30 cycles of 94°C for 40 seconds, 58°C for 1 minute (slow ramp rate), 72°C for 3 minutes, and a final extension step at 72°C for 10 minutes. Two sets of barcodes were incorporated into forward and reverse primers, respectively, after the universal adaptors and added to the amplicons in the second PCR reaction to allow demultiplexing all reads that were derived from a particular treatment. Primers sequences were: forward primer, AATGATACGGCGACCACCGAGATCTACACNNNNNNNNACACTCTTTCCCTACACGACGCTCTTCCGATCT (N denotes i5 barcode); reverse primer, CAAGCAGAAGACGGCATACGAGATNNNNNNNNGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT (N denotes i7 primer). The second PCR was performed using Phusion High-Fidelity DNA Polymerase (Thermo Scientific), as per the manufacturer’s instructions. For each 20 uL of reaction, 1 uL of the multiplex RT-PCR reaction products was used as templates. The thermal cycling conditions were as follows: 98°C for 30 seconds, 15 cycles of 98°C for 10 seconds, 65°C for 30 seconds, 72°C for 30 seconds, and a final extension step at 72°C for 5 minutes. The resulting libraries were pooled and sequenced.

treatment_protocol: Twenty-four hours prior to transfection, CGR8 and N2A cells were seeded in 96-well plates, 3000 and 5000 cells per well, respectively. Cells were transfected with the SMARTpool siRNAs at 50 nM final concentration using DharmaFECT1 reagent (Dharmacon), as recommended by the manufacturer.

tag: cell line


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rpa2 knockdown (T1252), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: AGACTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Qk knockdown (T1258), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TCTCACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Chmp1a knockdown (T1251), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TAGGCCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rlim knockdown (T1254), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TCTCGTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T1249), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TCCATGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prpf3 knockdown (T1256), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GAACACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T1248), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CACATGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbm39 knockdown (T1250), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GGTTAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbfox2 knockdown (T1253), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GGAAGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pabpc5 knockdown (T1245), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTAGTCGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ing5 knockdown (T1244), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACACGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif2d knockdown (T1242), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AAGGATCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Myst2 knockdown (T1243), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GAGATGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mov10l1 knockdown (T1241), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TACCTACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rex2 knockdown (T1266), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TTCGCGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pnpt1 knockdown (T1260), replicate 2

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CCAACGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Myef2 knockdown (T1240), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACCTCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Morf4l1 knockdown (T1238), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GCAAGGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ncbp2 knockdown (T1237), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CGTATTGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Npm3 knockdown (T1236), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GTACGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Lsm3 knockdown (T1235), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CCTTCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Lsm11 knockdown (T1239), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TCGACTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Lsm4 knockdown (T1234), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGACCTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Jdp2 knockdown (T1233), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTACAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kdm5c knockdown (T1246), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACAGCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pcbp1 knockdown (T1231), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ATGGCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Msi2 knockdown (T1229), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TCCTACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Trmt2a knockdown (T1230), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTTCACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nap1l5 knockdown (T1227), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GCGCATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zfp870 knockdown (T1228), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGGTAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mxd3 knockdown (T1221), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGCATCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nxf2 knockdown (T1223), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGTCAGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zfp637 knockdown (T1225), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CGTTAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nup107 knockdown (T1222), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GACTGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mettl3 knockdown (T1219), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACTGTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nup160 knockdown (T1215), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CGAATACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dpf1 knockdown (T1214), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GAGAGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phax knockdown (T1217), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GGATAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prmt8 knockdown (T1216), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGGAACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nol6 knockdown (T1213), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGCACTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Msi1 knockdown (T1212), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CATGACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbnl2 knockdown (T1210), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GTCTTGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nelf knockdown (T1207), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGGAGTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kdm3b knockdown (T1211), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGTCGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pcbp3 knockdown (T1224), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGCTGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T1209), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ATCGTTCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mkrn1 knockdown (T1226), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACAGAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mynn knockdown (T1208), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CATCGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phf12 knockdown (T1206), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTGAACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nsfl1c knockdown (T1204), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GGATGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kdm4b knockdown (T1220), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CAACCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kdm4a knockdown (T1201), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TACGGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nxf1 knockdown (T1218), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TCTGCTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Lsm2 knockdown (T1202), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GACAACTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbnl1 knockdown (T1200), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGTGACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nup133 knockdown (T1199), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CTTGGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nupl2 knockdown (T1196), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGAAGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Myst1 knockdown (T1198), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CAGAAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T1191), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCATCCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mov10 knockdown (T1195), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TTCCATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pabpc1 knockdown (T1193), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGCAACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nono knockdown (T1189), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACGTGTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Luc7l2 knockdown (T1192), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GGATATCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Khdrbs2 knockdown (T1205), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGTGACTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Lsm7 knockdown (T1185), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGGACTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nufip1 knockdown (T1186), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TTGGTACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Msl3 knockdown (T1187), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGTATACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Lin28a knockdown (T1182), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCGGATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Morf4l2 knockdown (T1181), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATAACGCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mkrn2 knockdown (T1184), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TTCGCCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T1179), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGCCTATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mus81 knockdown (T1180), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACAGCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Luc7l knockdown (T1183), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GAGTGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nup88 knockdown (T1175), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATGGTTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kdm4c knockdown (T1203), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTGACACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Lsm10 knockdown (T1178), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GAGACAGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Neurog2 knockdown (T1174), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GGTATTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mphosph10 knockdown (T1194), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATGCGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T1197), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GATGACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Myst4 knockdown (T1176), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTCGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mkrn3 knockdown (T1190), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACTGTGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, L3mbtl2 knockdown (T1170), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GAAGCATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcm8 knockdown (T1167), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AACGCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phf10 knockdown (T1168), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACCATGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mfap1a knockdown (T1172), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACACGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pabpc4 knockdown (T1169), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACCACATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zfml knockdown (T1165), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCATTAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Parn knockdown (T1188), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CTGAGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Naa38 knockdown (T1166), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTCCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mga knockdown (T1171), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCTACGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nup155 knockdown (T1232), replicate 2

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CAGTACTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbnl3 knockdown (T1163), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTGAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Lsm5 knockdown (T1160), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTGAACAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rod1 knockdown (T1341), replicate 2

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TTAAGCCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmgn5 knockdown (T1159), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CTCACAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Magoh knockdown (T1177), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AACCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nup37 knockdown (T1161), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGCTGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, L3mbtl3 knockdown (T1156), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGTCCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Klhdc3 knockdown (T1157), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGGTTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ncl knockdown (T1158), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATCCTACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nap1l1 knockdown (T1173), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGCTCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nap1l4 knockdown (T1155), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CATGTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Parg knockdown (T1154), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGCGTTAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T1153), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGTGTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ep400 knockdown (T1150), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATGCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T1152), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCACAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpd knockdown (T1151), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACCTCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Exosc4 knockdown (T1149), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGACGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Khdrbs3 knockdown (T1164), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GGTTCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nxf7 knockdown (T1162), replicate 2

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTAGTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dhx38 knockdown (T1141), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GGTAGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpr knockdown (T1142), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTACGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif2s2 knockdown (T1144), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGGACTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ino80b knockdown (T1146), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCCATCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prmt3 knockdown (T1148), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TATACGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrpdl knockdown (T1135), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CCTATAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdgfrp3 knockdown (T1140), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACAGTGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnph1 knockdown (T1137), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCAGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Gemin4 knockdown (T1134), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CAGTCTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpa1 knockdown (T1130), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATCTGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hira knockdown (T1131), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGGCCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dnmt3l knockdown (T1138), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TATTGCGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dppa5a knockdown (T1133), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TTGCGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hist1h2bc knockdown (T1136), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ATGGAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif2c4 knockdown (T1132), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CGTTGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dnd1 knockdown (T1127), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGCTAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dhx30 knockdown (T1128), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CAAGTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif2c3 knockdown (T1126), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CACTTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpm knockdown (T1129), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACACCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dync1li1 knockdown (T1145), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGGTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dido1 knockdown (T1143), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTCACTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Drosha knockdown (T1125), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGGTTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, G3bp2 knockdown (T1124), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGTCCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hells knockdown (T1139), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CCGCTATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Fer knockdown (T1147), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGCCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hras1 knockdown (T1122), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGTGGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cenpi knockdown (T1123), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAATCGGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Epb4.1l4a knockdown (T1121), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGAGGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Gtl3 knockdown (T1119), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCTCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdgfrp2 knockdown (T1117), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AACCTACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dgcr14 knockdown (T1118), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATCGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Frg1 knockdown (T1115), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GGTAATGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Syf2 knockdown (T1116), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTACTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpc knockdown (T1114), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TACGTAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T1113), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CGTTAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif2c2 knockdown (T1109), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCAAGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dhx9 knockdown (T1112), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGCAGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dhx8 knockdown (T1108), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ATCCGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dhx35 knockdown (T1107), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCAGGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dmap1 knockdown (T1106), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGGTACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rcan2 knockdown (T1104), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACGACATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif4b knockdown (T1103), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTCTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tspyl2 knockdown (T1102), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CGCGTAAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T1101), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TAGGTTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zc3h12d knockdown (T1100), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TACGCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Gpatch1 knockdown (T1099), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GACATGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmg20b knockdown (T1097), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTAGTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Thoc5 knockdown (T1098), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCCTCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ehmt1 knockdown (T1120), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCTGCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, H3f3a knockdown (T1093), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AAGCTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hp1bp3 knockdown (T1096), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CACTTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T1095), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTGGCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpl knockdown (T1094), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGGTTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cenpt knockdown (T1110), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCGTAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Gemin6 knockdown (T1092), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACTGTCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Incenp knockdown (T1091), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GATGGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Thumpd3 knockdown (T1089), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AAGCCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpu knockdown (T1111), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGAGTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Exosc3 knockdown (T1088), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GAAGACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prpf40a knockdown (T1087), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTTCCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif4a1 knockdown (T1090), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GACACTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T1083), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACTCAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, H1fx knockdown (T1082), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGCGAATA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zfp771 knockdown (T1085), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTAGCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpab knockdown (T1105), replicate 2

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GAAGAGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Gtf3a knockdown (T1086), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTCATCTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Gemin5 knockdown (T1081), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGACCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpa2b1 knockdown (T1084), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTCCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Larp7 knockdown (T1080), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTTATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnph2 knockdown (T1079), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCGTTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hbp1 knockdown (T1078), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTAGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tra2a knockdown (T1075), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGGTCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Flywch1 knockdown (T1076), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACCAACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dazap1 knockdown (T1074), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCGAAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dnajc8 knockdown (T1073), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GCGCAATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dgcr8 knockdown (T1072), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ATCGCGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Exosc5 knockdown (T1071), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TACCATGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mms22l knockdown (T1070), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CAGTTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmgb2 knockdown (T1069), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTGGTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hemt1 knockdown (T1068), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTCCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Gemin7 knockdown (T1067), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ATAACCGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dhx15 knockdown (T1065), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CGAACCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dicer1 knockdown (T1066), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCGCATAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Esrrb knockdown (T1063), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTTGGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmgb1 knockdown (T1064), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTTCTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Leng9 knockdown (T1058), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CACTCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dazl knockdown (T1061), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGTATTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Grwd1 knockdown (T1060), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTCCTAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kat2a knockdown (T1062), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGTTGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T1056), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCGTTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hist3h2ba knockdown (T1059), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CAGAGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif2s1 knockdown (T1077), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GAGTCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Crnkl1 knockdown (T1055), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TAGCGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zfp828 knockdown (T1051), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GAAGCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cpped1 knockdown (T1050), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CACTCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cpne1 knockdown (T1053), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTCTAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Celf4 knockdown (T1049), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTACCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zfp473 knockdown (T1054), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACTCTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smc3 knockdown (T1047), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTGGTTCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cherp knockdown (T1048), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACCACTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbd6 knockdown (T1052), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCTGAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cdca8 knockdown (T1040), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TATAGCCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Parp8 knockdown (T1039), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CGAATTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rif1 knockdown (T1044), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGCGTTAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cpeb4 knockdown (T1045), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCCTCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cstf2t knockdown (T1046), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACCTGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ddx5 knockdown (T1037), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTCCGGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Capn7 knockdown (T1041), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCTGGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Utp3 knockdown (T1038), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CCTAGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cxxc1 knockdown (T1043), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGATAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cpeb1 knockdown (T1042), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACGTTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T1057), replicate 2

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCAATACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nudt21 knockdown (T1035), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CCATCGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cpsf3 knockdown (T1036), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTGAGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Macrod1 knockdown (T1024), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTTCGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ddx50 knockdown (T1022), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTATGGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, C1qbp knockdown (T1031), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGCAGTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zcchc10 knockdown (T1032), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCGAGTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ddx46 knockdown (T1029), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGATGGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rcor1 knockdown (T1033), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGTTCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Wdhd1 knockdown (T1020), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGTGAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cbx7 knockdown (T1025), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTGACTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ccar1 knockdown (T1026), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTTGACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ddx39 knockdown (T1019), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TGACAGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Samd4b knockdown (T1027), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CAACGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mysm1 knockdown (T1021), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ATCGAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Enox1 knockdown (T1028), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTGGCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Carm1 knockdown (T1030), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGCTAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cpeb2 knockdown (T1034), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TACCAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif4a3 knockdown (T1018), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTTCAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cbx2 knockdown (T1015), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGGTGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T1017), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTATCCGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cpsf2 knockdown (T1013), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGTACGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Clns1a knockdown (T1023), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGGATGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Setd3 knockdown (T1014), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CGGCTATA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Bicc1 knockdown (T1016), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGACTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Slx4 knockdown (T1007), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTAGACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, D4Wsu53e knockdown (T1011), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CATCCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cdyl2 knockdown (T1010), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGAGGACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Slu7 knockdown (T1012), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ATGCAACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mis18bp1 knockdown (T1009), replicate 2

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACAGGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Brms1l knockdown (T1003), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTGATCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sf3b3 knockdown (T1001), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTCTACAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cstf1 knockdown (T1008), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GCATCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cpsf1 knockdown (T0995), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTGACACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Capn5 knockdown (T0998), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGCTCATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mthfsd knockdown (T1000), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGGAAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbm41 knockdown (T0992), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CATGGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ddx3x knockdown (T0993), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGAGGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zbtb24 knockdown (T0994), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GACAGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Clk1 knockdown (T0991), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CGCCTTAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Enox2 knockdown (T0996), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCTCGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zfp12 knockdown (T1006), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGTGTCTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, D2Ertd750e knockdown (T0989), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GACTTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cdk2 knockdown (T1004), replicate 2

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTTGTGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab