title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Kdm4a knockdown (T1201), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TACGGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Lin28a knockdown (T1182), replicate 1

status: Public on Feb 02 2017

type: SRA

city: Toronto

first: Ulrich

last: Braunschweig

state: Ontario

address: 160 College Street

department: Donnelly Centre

country: Canada

institute: University of Toronto

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCGGATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab

library_source: transcriptomic

data_processing:
CASAVA 1.8 was used for base calling.
Fastq files contain demultiplexed reads which were assigned to the appropriate treatment by matching to expected forward and reverse barcodes (sequenced in dedicated reads; not supplied).
Forward and reverse event reads were mapped to custom junction libraries representing all expected splice variants (supplied as processed files), using bowtie with settings --best -v 3 -k 1 --trim3 26 --trim5 20. Trimming was done to remove lower-quality, uninformative ends and because forward reads had a missing base call at position 11 due to a power outage. Junction libraries were first constructed from NCBIm37/mm9 gene annotations, and then refined based on the results of de novo mapping of the reads from one full Illumina lane from each cell line using tophat (default settings with -i 40 and providing Ensembl transcript annotations for NCBIm37), after quality trimming (minimum MAPQ of 33) from the 3'-end with the fastx toolkit. Mapped reads were counted per junction.
Alternative splicing analysis: Percent-spliced-in (PSI) values were calculated for each alternative exon, or part thereof in the case of alternative 5'-/3'-splice sites ('event'), from read tallies as follows: PSI was calculated independently from forward and reverse reads as the percentage of reads supporting inclusion divided by the total number of reads for the event. For alternative 5'/3'-ss events that were part of an alternative exon (Foxm1.A2, Mta1.A1, Uspl1.A3), the PSI was instead calculated with reference to the total reads supporting inclusion of that exon in order to assess independent regulation of alternative splice site usage. Only the read direction in which all reads unambiguously supported either inclusion or exclusion of an event was used, and the average if that applied for both. Exploratory analysis revealed that PSI values showed low-level batch effects per 96-well plate which we moderated by subtracting a weighted plate median in which negative controls (siNT and mock treatment) were given 20x more weight than other samples. To derive variances, and because PSI values are not nearly normally distributed but roughly follow a beta distribution, we elected to fit a beta distribution to each pair of replicate treatments, as well as to all negative controls from both replicates, using maximum-likelihood fitting as implemented in the fitdistr() function from the R package MASS {Venables & Ripley, Modern Applied Statistics with S (2002)}. Iterative optimization of shape parameters was initiated with settings x=PSI, shape1=1, shape2=1, method=”L-BFGS-B”, lower=0.01, and upper=mean number of reads supporting each PSI value. A modified Strictly Standardized Mean Difference (SSMD {Zhang, Genomics (2007)}) was then calculated based on the formula: SSMD = (μt – μc)/SQRT(vart + varc) where μt and μc are the means (corresponding to the PSI), and vart and varc the variances of the beta distributions fitted to the treatment replicates and negative controls, respectively. Events for which not all reads from at least one direction were informative (Mff.A2, Tead1.A2) were excluded from further analysis, as were events in individual treatments with less than 20 reads in one or both replicates (~9% of all event x treatment combinations). Additionally, the following events were removed from further splicing analysis: expression only events or constitutive exons, Fgf4, Gapdh, Srpk2, Srrm4; events with consistently low read counts: Atg13.A1, H2afy.A2, Tcf7l1 (N2A only), Dnmt3b (N2A only); or because measured inclusion was biased by differential length of isoforms:, Fgfr1, Sall4.
Expression analysis: Read counts from all splice variants of each gene were used to estimate relative mRNA expression levels, reads per million reads (RPMs). Differential expression analysis based on raw read counts was performed using the generalized linear models workflow from the R package edgeR. Plate, position (edge/interior) and treatment were used as design factors (where all treatments of each type of control were treated as replicates.) Models fitted using estimateDisp() to estimate the common, trended, and tag-wise dispersion for the CGR8 and N2A data separately. Subsequently, differences attributable to treatment, plate, or position contrasts were extracted with glmLRT() and represented as log2-fold changes with associated FDR. Fold-changes for treatments are relative to the siNT and mock-treatment controls.
Genome_build: NCBIm37/mm9
Supplementary_files_format_and_content: Processed files are either tab-delimited  tables (.tab) or FASTA files (.fa). KnockdownAnnotation.tab contains treatment annotations and well/plate positions. ScreenJuncUp.20-77.tab and ScreenJuncDn.20-77.tab contain the custom junction upstream and downstram junction libraries, respectively, and ScreenEvent_junctions.tab contains the information which junctions were used to calculate PSI for each event. PSI.SSMD.CGR8.tab and PSI.SSMD.N2A.tab contain raw PSI of each replicate and final SSMD. Reads_perEvent_CGR8.tab and Reads_perEvent_N2A.tab contain raw read counts on which expression analyis was based, and Expression.CGR8.treatments.tab and Expression.N2A.treatments.tab contain modeled relative abundance and fold-change with associated FDR for each treatment type.

molecule: total RNA

organism: Mus musculus

source_name: Neuroblastoma cells

growth_protocol: CGR8 mouse embryonic stem cells (ESCs) were cultured as described previously on gelatin-coated plates (Gabut et al., Cell (2011), Han  et al., Nature (2013)). Mouse neuroblastoma (N2A) cells were grown in DMEM supplemented with 10% FBS, sodium pyruvate, MEM non-essential amino acids, and penicillin/streptomycin. All cell lines were maintained at 37°C with 5% CO2.

extract_protocol:
Forty-eight hours post-transfection, total RNA were purified from cultured cells using RNeasy Plus 96 Kit (Qiagen), as per the manufacturer’s instructions.
For each sample, a multiplex RT-PCR assay was first applied to simultaneously amplify 50 AS and/or expression events in a single reaction. The multiplex RT-PCR reaction was carried out in 96-well plates using the OneStep RT-PCR kit (Qiagen) as recommended by the manufacturer, with the following changes: reactions were performed in a volume of 20 uL with 2 uL of the purified total RNA as input, and a mixture of 50 pairs of primers was added to each reaction with a final concentration of 0.25 uM for each individual forward and reverse primer. Four identical Veriti 96-well Thermal Cyclers (Applied Biosystems) were used with the following conditions: 50°C for 30 minutes, 95°C for 15 minute, 30 cycles of 94°C for 40 seconds, 58°C for 1 minute (slow ramp rate), 72°C for 3 minutes, and a final extension step at 72°C for 10 minutes. Two sets of barcodes were incorporated into forward and reverse primers, respectively, after the universal adaptors and added to the amplicons in the second PCR reaction to allow demultiplexing all reads that were derived from a particular treatment. Primers sequences were: forward primer, AATGATACGGCGACCACCGAGATCTACACNNNNNNNNACACTCTTTCCCTACACGACGCTCTTCCGATCT (N denotes i5 barcode); reverse primer, CAAGCAGAAGACGGCATACGAGATNNNNNNNNGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT (N denotes i7 primer). The second PCR was performed using Phusion High-Fidelity DNA Polymerase (Thermo Scientific), as per the manufacturer’s instructions. For each 20 uL of reaction, 1 uL of the multiplex RT-PCR reaction products was used as templates. The thermal cycling conditions were as follows: 98°C for 30 seconds, 15 cycles of 98°C for 10 seconds, 65°C for 30 seconds, 72°C for 30 seconds, and a final extension step at 72°C for 5 minutes. The resulting libraries were pooled and sequenced.

treatment_protocol: Twenty-four hours prior to transfection, CGR8 and N2A cells were seeded in 96-well plates, 3000 and 5000 cells per well, respectively. Cells were transfected with the SMARTpool siRNAs at 50 nM final concentration using DharmaFECT1 reagent (Dharmacon), as recommended by the manufacturer.

tag: cell line


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Morf4l2 knockdown (T1181), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATAACGCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mus81 knockdown (T1180), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACAGCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, mock (T1179), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGCCTATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Nsfl1c knockdown (T1204), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GGATGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mbnl1 knockdown (T1200), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGTGACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Lsm7 knockdown (T1185), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGGACTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mphosph10 knockdown (T1194), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATGCGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Myst1 knockdown (T1198), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CAGAAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Magoh knockdown (T1177), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AACCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Nupl2 knockdown (T1196), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGAAGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Nup88 knockdown (T1175), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATGGTTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Lsm10 knockdown (T1178), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GAGACAGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Nap1l1 knockdown (T1173), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGCTCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mcm8 knockdown (T1167), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AACGCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Pabpc4 knockdown (T1169), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACCACATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, L3mbtl2 knockdown (T1170), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GAAGCATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mfap1a knockdown (T1172), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACACGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Phf10 knockdown (T1168), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACCATGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Nxf7 knockdown (T1162), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTAGTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Lsm5 knockdown (T1160), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTGAACAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, L3mbtl3 knockdown (T1156), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGTCCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Naa38 knockdown (T1166), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTCCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ncl knockdown (T1158), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATCCTACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Klhdc3 knockdown (T1157), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGGTTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Neurog2 knockdown (T1174), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GGTATTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfml knockdown (T1165), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCATTAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mga knockdown (T1171), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCTACGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mbnl3 knockdown (T1163), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTGAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Khdrbs3 knockdown (T1164), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GGTTCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Nap1l4 knockdown (T1155), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CATGTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Parg knockdown (T1154), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGCGTTAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siNT (T1153), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGTGTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpd knockdown (T1151), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACCTCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ep400 knockdown (T1150), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATGCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Prmt3 knockdown (T1148), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TATACGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ino80b knockdown (T1146), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCCATCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dync1li1 knockdown (T1145), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGGTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Fer knockdown (T1147), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGCCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Myst4 knockdown (T1176), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTCGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eif2s2 knockdown (T1144), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGGACTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dido1 knockdown (T1143), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTCACTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpr knockdown (T1142), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTACGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrpdl knockdown (T1135), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CCTATAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hdgfrp3 knockdown (T1140), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACAGTGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dnmt3l knockdown (T1138), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TATTGCGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hells knockdown (T1139), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CCGCTATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnph1 knockdown (T1137), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCAGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hira knockdown (T1131), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGGCCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpa1 knockdown (T1130), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATCTGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpm knockdown (T1129), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACACCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dppa5a knockdown (T1133), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TTGCGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eif2c4 knockdown (T1132), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CGTTGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Nup37 knockdown (T1161), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGCTGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dhx30 knockdown (T1128), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CAAGTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Drosha knockdown (T1125), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGGTTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dnd1 knockdown (T1127), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGCTAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Exosc4 knockdown (T1149), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGACGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, G3bp2 knockdown (T1124), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGTCCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dhx38 knockdown (T1141), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GGTAGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Gtl3 knockdown (T1119), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCTCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cenpi knockdown (T1123), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAATCGGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hdgfrp2 knockdown (T1117), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AACCTACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hmgn5 knockdown (T1159), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CTCACAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Gemin4 knockdown (T1134), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CAGTCTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Syf2 knockdown (T1116), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTACTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hras1 knockdown (T1122), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGTGGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ehmt1 knockdown (T1120), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCTGCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Epb4.1l4a knockdown (T1121), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGAGGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Frg1 knockdown (T1115), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GGTAATGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hist1h2bc knockdown (T1136), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ATGGAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpu knockdown (T1111), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGAGTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpc knockdown (T1114), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TACGTAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siMbnl (T1113), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CGTTAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, mock (T1152), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCACAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eif2c3 knockdown (T1126), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CACTTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cenpt knockdown (T1110), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCGTAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eif2c2 knockdown (T1109), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCAAGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dhx8 knockdown (T1108), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ATCCGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dgcr14 knockdown (T1118), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATCGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dhx35 knockdown (T1107), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCAGGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eif4b knockdown (T1103), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTCTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Rcan2 knockdown (T1104), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACGACATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dmap1 knockdown (T1106), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGGTACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpab knockdown (T1105), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GAAGAGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Tspyl2 knockdown (T1102), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CGCGTAAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Gpatch1 knockdown (T1099), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GACATGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zc3h12d knockdown (T1100), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TACGCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hp1bp3 knockdown (T1096), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CACTTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siMbnl (T1095), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTGGCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dhx9 knockdown (T1112), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGCAGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpl knockdown (T1094), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGGTTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hmg20b knockdown (T1097), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTAGTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Gemin6 knockdown (T1092), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACTGTCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Incenp knockdown (T1091), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GATGGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eif4a1 knockdown (T1090), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GACACTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Thumpd3 knockdown (T1089), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AAGCCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siNT (T1101), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TAGGTTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Exosc3 knockdown (T1088), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GAAGACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Prpf40a knockdown (T1087), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTTCCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnpa2b1 knockdown (T1084), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTCCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, mock (T1083), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACTCAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Gtf3a knockdown (T1086), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTCATCTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp771 knockdown (T1085), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTAGCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Gemin5 knockdown (T1081), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGACCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Larp7 knockdown (T1080), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTTATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, H1fx knockdown (T1082), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGCGAATA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Flywch1 knockdown (T1076), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACCAACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hnrnph2 knockdown (T1079), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCGTTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Tra2a knockdown (T1075), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGGTCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dazap1 knockdown (T1074), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCGAAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Thoc5 knockdown (T1098), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCCTCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hbp1 knockdown (T1078), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTAGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mms22l knockdown (T1070), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CAGTTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dnajc8 knockdown (T1073), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GCGCAATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hmgb2 knockdown (T1069), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTGGTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dgcr8 knockdown (T1072), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ATCGCGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hemt1 knockdown (T1068), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTCCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Exosc5 knockdown (T1071), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TACCATGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dhx15 knockdown (T1065), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CGAACCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hmgb1 knockdown (T1064), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTTCTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Grwd1 knockdown (T1060), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTCCTAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dazl knockdown (T1061), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGTATTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hist3h2ba knockdown (T1059), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CAGAGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Leng9 knockdown (T1058), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CACTCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, mock (T1056), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCGTTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, H3f3a knockdown (T1093), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AAGCTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpne1 knockdown (T1053), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTCTAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp473 knockdown (T1054), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACTCTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siNT (T1057), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCAATACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Kat2a knockdown (T1062), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGTTGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mbd6 knockdown (T1052), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCTGAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Gemin7 knockdown (T1067), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ATAACCGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Celf4 knockdown (T1049), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTACCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dicer1 knockdown (T1066), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCGCATAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cherp knockdown (T1048), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACCACTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpped1 knockdown (T1050), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CACTCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Smc3 knockdown (T1047), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTGGTTCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp828 knockdown (T1051), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GAAGCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Esrrb knockdown (T1063), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTTGGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cstf2t knockdown (T1046), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACCTGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cdca8 knockdown (T1040), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TATAGCCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpeb1 knockdown (T1042), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACGTTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Rif1 knockdown (T1044), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGCGTTAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cxxc1 knockdown (T1043), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGATAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Capn7 knockdown (T1041), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCTGGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Prr3 knockdown (T1322), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CGGCATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Crnkl1 knockdown (T1055), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TAGCGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Utp3 knockdown (T1038), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CCTAGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpsf3 knockdown (T1036), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTGAGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpeb2 knockdown (T1034), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TACCAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Nudt21 knockdown (T1035), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CCATCGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ddx5 knockdown (T1037), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTCCGGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, C1qbp knockdown (T1031), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGCAGTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zcchc10 knockdown (T1032), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCGAGTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eif2s1 knockdown (T1077), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GAGTCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Carm1 knockdown (T1030), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGCTAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpeb4 knockdown (T1045), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCCTCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ccar1 knockdown (T1026), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTTGACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cbx7 knockdown (T1025), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTGACTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Enox1 knockdown (T1028), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTGGCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Clns1a knockdown (T1023), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGGATGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Macrod1 knockdown (T1024), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTTCGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mysm1 knockdown (T1021), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ATCGAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Parp8 knockdown (T1039), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CGAATTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ddx39 knockdown (T1019), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TGACAGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Wdhd1 knockdown (T1020), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGTGAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cbx2 knockdown (T1015), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGGTGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Bicc1 knockdown (T1016), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGACTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siMbnl (T1017), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTATCCGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Setd3 knockdown (T1014), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CGGCTATA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mis18bp1 knockdown (T1009), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACAGGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Rcor1 knockdown (T1033), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGTTCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ddx46 knockdown (T1029), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGATGGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpsf2 knockdown (T1013), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGTACGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, D4Wsu53e knockdown (T1011), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CATCCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Slu7 knockdown (T1012), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ATGCAACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cdyl2 knockdown (T1010), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGAGGACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Slx4 knockdown (T1007), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTAGACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cstf1 knockdown (T1008), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GCATCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Brms1l knockdown (T1003), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTGATCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cdk2 knockdown (T1004), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTTGTGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siNT (T1005), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GATGTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp12 knockdown (T1006), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGTGTCTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ddx50 knockdown (T1022), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTATGGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Samd4b knockdown (T1027), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CAACGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Sf3b3 knockdown (T1001), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTCTACAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Casc3 knockdown (T1002), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ATCGTAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Mthfsd knockdown (T1000), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGGAAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Capn5 knockdown (T0998), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGCTCATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siMbnl (T0999), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTCTCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ccnl2 knockdown (T0997), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CCTTGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eif4a3 knockdown (T1018), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTTCAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpsf1 knockdown (T0995), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTGACACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Enox2 knockdown (T0996), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCTCGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ddx3x knockdown (T0993), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGAGGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Rbm41 knockdown (T0992), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CATGGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Clk1 knockdown (T0991), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CGCCTTAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zbtb24 knockdown (T0994), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GACAGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, mock (T0987), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTTGCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Phf21a knockdown (T0986), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGTGGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Bud13 knockdown (T0983), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTAGCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Trmt1 knockdown (T0981), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTCAGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Deb1 knockdown (T0985), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGTCCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, D2Ertd750e knockdown (T0989), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GACTTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpeb3 knockdown (T0982), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CATCAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, D19Bwg1357e knockdown (T0988), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GCATAACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cic knockdown (T0980), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGAGACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ddx1 knockdown (T0979), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ATTACGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zwint knockdown (T0984), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ATGCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Rbm34 knockdown (T0978), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GGTTATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpsf4l knockdown (T0975), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ACACTCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Chd3 knockdown (T0976), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTACGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Csn3 knockdown (T0974), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ACTCCTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Camk4 knockdown (T0972), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CGATGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Chd1l knockdown (T0973), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTAGTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Txnl4b knockdown (T0971), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ATGCTTCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Carhsp1 knockdown (T0970), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ACGTGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp768 knockdown (T0969), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TTCCTTGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zbtb40 knockdown (T0968), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CGAATTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cstf2 knockdown (T0966), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGCTAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ddx19a knockdown (T0965), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCAGACTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zbtb46 knockdown (T0990), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GAACCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, D1Pas1 knockdown (T0967), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCAGCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Boll knockdown (T0977), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGCTGTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Cpsf4 knockdown (T0964), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ACCACTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ddx41 knockdown (T0963), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGACGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, mock (T0960), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GATGAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, siNT (T0961), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCCAACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Baz2a knockdown (T0959), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ACTCAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Esrp2 knockdown (T0958), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GACTGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Setd1a knockdown (T0956), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GCATCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ercc6l knockdown (T0953), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ACCTAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Arglu1 knockdown (T0951), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TTGCGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zbtb38 knockdown (T0954), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ATGGCCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zgpat knockdown (T0947), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CTCTCAGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Hmgxb3 knockdown (T0950), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CCATCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Srbd1 knockdown (T0948), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CTGAAGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Prmt6 knockdown (T0946), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCGATCGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Adar knockdown (T0949), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCACCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Gemin8 knockdown (T0945), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGCATCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Raver2 knockdown (T0944), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CATCGTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zc3h12a knockdown (T0943), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGAGAGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Samd14 knockdown (T0942), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CACTAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zbtb44 knockdown (T0941), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGTCCTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Eme1 knockdown (T0937), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GTTGTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Tmem63a knockdown (T0938), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGTGGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Srrt knockdown (T0940), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GGATTAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Morn4 knockdown (T0934), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CGATGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp958 knockdown (T0936), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCGTCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Tbl1xr1 knockdown (T0939), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGGAACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp459 knockdown (T0957), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TACGCGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Actr8 knockdown (T0933), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TAGGAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Asf1a knockdown (T0932), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CCTACCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Lemd2 knockdown (T0962), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCCTTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Dhx57 knockdown (T0955), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GCGGATAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp934 knockdown (T0929), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CAACAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Suv420h2 knockdown (T0930), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGACACTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Ap1s3 knockdown (T0931), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGGACATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Setd1b knockdown (T0952), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCAGGTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Srek1 knockdown (T0928), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TACCGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Sfr1 knockdown (T0925), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGCTTGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Rbfox1 knockdown (T0927), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCCAGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Arrdc1 knockdown (T0926), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ATCCTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Aqr knockdown (T0924), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TACCTTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Zfp445 knockdown (T0917), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GTGTTGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Rbm47 knockdown (T0916), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GGCCATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, Baz1a knockdown (T0922), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ACCTGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in N2A, AI314976 knockdown (T0920), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGACGACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.N2A.tab
Reads_perEvent_N2A.tab
Expression.N2A.treatments.tab