title: SEQC_ILM_MAY_C_3_L08_GGCTAC_AD0E8UACXX


title: SEQC_ILM_MAY_C_5_L03_ACTGAT_AD0E8UACXX

status: Public on Aug 08 2014

type: SRA

city: Shanghai

first: Leming

last: Shi

address: 2005 Songhu Road

department: School of Life Sciences

country: China

institute: Fudan University

library_source: transcriptomic

data_processing:
Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.
Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS
Genome_build: hg19
Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site

molecule: total RNA

organism: Homo sapiens

source_name: Mix of Sample A (UHRR) and Sample B (HBRR) (3:1)

extract_protocol: Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively.

tag: seqc sample

value: C

tag: platform

value: Illumina HiSeq 2000

tag: site

value: MAY

tag: library id

tag: lane

tag: barcode

value: ACTGAT

tag: flowcell


title: SEQC_ILM_MAY_C_3_L07_GGCTAC_AD0E8UACXX

value: GGCTAC


title: SEQC_ILM_MAY_C_3_L06_GGCTAC_BD0E99ACXX


title: SEQC_ILM_MAY_C_3_L06_GGCTAC_AD0E8UACXX


title: SEQC_ILM_MAY_C_3_L05_GGCTAC_BD0E99ACXX


title: SEQC_ILM_MAY_C_3_L05_GGCTAC_AD0E8UACXX


title: SEQC_ILM_MAY_C_3_L04_GGCTAC_AD0E8UACXX


title: SEQC_ILM_MAY_C_3_L03_GGCTAC_BD0E99ACXX


title: SEQC_ILM_MAY_C_3_L03_GGCTAC_AD0E8UACXX


title: SEQC_ILM_MAY_C_4_L05_ATGTCA_AD0E8UACXX

value: ATGTCA


title: SEQC_ILM_MAY_C_4_L04_ATGTCA_BD0E99ACXX


title: SEQC_ILM_MAY_C_3_L02_GGCTAC_BD0E99ACXX


title: SEQC_ILM_MAY_C_3_L01_GGCTAC_BD0E99ACXX


title: SEQC_ILM_MAY_C_3_L02_GGCTAC_AD0E8UACXX


title: SEQC_ILM_MAY_C_2_L07_CAGATC_BD0E99ACXX

value: CAGATC


title: SEQC_ILM_MAY_C_2_L07_CAGATC_AD0E8UACXX


title: SEQC_ILM_MAY_C_2_L08_CAGATC_BD0E99ACXX


title: SEQC_ILM_MAY_C_2_L06_CAGATC_BD0E99ACXX


title: SEQC_ILM_MAY_C_2_L06_CAGATC_AD0E8UACXX


title: SEQC_ILM_MAY_C_2_L08_CAGATC_AD0E8UACXX


title: SEQC_ILM_MAY_C_2_L05_CAGATC_BD0E99ACXX


title: SEQC_ILM_MAY_C_4_L01_ATGTCA_BD0E99ACXX


title: SEQC_ILM_MAY_C_2_L05_CAGATC_AD0E8UACXX


title: SEQC_ILM_MAY_C_2_L03_CAGATC_AD0E8UACXX


title: SEQC_ILM_MAY_C_2_L03_CAGATC_BD0E99ACXX


title: SEQC_ILM_MAY_C_2_L04_CAGATC_BD0E99ACXX


title: SEQC_ILM_MAY_C_2_L02_CAGATC_BD0E99ACXX


title: SEQC_ILM_MAY_C_2_L02_CAGATC_AD0E8UACXX


title: SEQC_ILM_MAY_C_2_L01_CAGATC_BD0E99ACXX


title: SEQC_ILM_MAY_C_2_L01_CAGATC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L08_TTAGGC_BD0E99ACXX

value: TTAGGC


title: SEQC_ILM_MAY_C_1_L07_TTAGGC_BD0E99ACXX


title: SEQC_ILM_MAY_C_1_L06_TTAGGC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L06_TTAGGC_BD0E99ACXX


title: SEQC_ILM_MAY_C_3_L01_GGCTAC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L08_TTAGGC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L05_TTAGGC_BD0E99ACXX


title: SEQC_ILM_MAY_C_3_L04_GGCTAC_BD0E99ACXX


title: SEQC_ILM_MAY_C_1_L07_TTAGGC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L05_TTAGGC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L04_TTAGGC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L04_TTAGGC_BD0E99ACXX


title: SEQC_ILM_MAY_C_1_L01_TTAGGC_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L08_GAGTGG_AD0E8UACXX

source_name: Human Brain Reference RNA (HBRR) from Ambion

value: B

value: GAGTGG


title: SEQC_ILM_MAY_B_5_L08_GAGTGG_BD0E99ACXX


title: SEQC_ILM_MAY_C_1_L02_TTAGGC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L02_TTAGGC_BD0E99ACXX


title: SEQC_ILM_MAY_C_1_L01_TTAGGC_BD0E99ACXX


title: SEQC_ILM_MAY_C_2_L04_CAGATC_AD0E8UACXX


title: SEQC_ILM_MAY_C_1_L03_TTAGGC_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L06_GAGTGG_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L06_GAGTGG_BD0E99ACXX


title: SEQC_ILM_MAY_C_1_L03_TTAGGC_BD0E99ACXX


title: SEQC_ILM_MAY_B_5_L07_GAGTGG_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L05_GAGTGG_BD0E99ACXX


title: SEQC_ILM_MAY_B_5_L04_GAGTGG_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L03_GAGTGG_BD0E99ACXX


title: SEQC_ILM_MAY_B_5_L04_GAGTGG_BD0E99ACXX


title: SEQC_ILM_MAY_B_5_L03_GAGTGG_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L01_GAGTGG_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L02_GAGTGG_BD0E99ACXX


title: SEQC_ILM_MAY_B_5_L02_GAGTGG_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L01_GAGTGG_BD0E99ACXX


title: SEQC_ILM_MAY_B_4_L08_AGTTCC_BD0E99ACXX

value: AGTTCC


title: SEQC_ILM_MAY_B_4_L08_AGTTCC_AD0E8UACXX


title: SEQC_ILM_MAY_B_4_L07_AGTTCC_BD0E99ACXX


title: SEQC_ILM_MAY_B_5_L07_GAGTGG_BD0E99ACXX


title: SEQC_ILM_MAY_B_4_L06_AGTTCC_AD0E8UACXX


title: SEQC_ILM_MAY_B_4_L07_AGTTCC_AD0E8UACXX


title: SEQC_ILM_MAY_B_4_L06_AGTTCC_BD0E99ACXX


title: SEQC_ILM_MAY_B_4_L05_AGTTCC_AD0E8UACXX


title: SEQC_ILM_MAY_B_4_L02_AGTTCC_BD0E99ACXX


title: SEQC_ILM_MAY_B_4_L05_AGTTCC_BD0E99ACXX


title: SEQC_ILM_MAY_B_4_L03_AGTTCC_BD0E99ACXX


title: SEQC_ILM_MAY_B_4_L02_AGTTCC_AD0E8UACXX


title: SEQC_ILM_MAY_B_4_L01_AGTTCC_BD0E99ACXX


title: SEQC_ILM_MAY_B_4_L04_AGTTCC_AD0E8UACXX


title: SEQC_ILM_MAY_B_5_L05_GAGTGG_AD0E8UACXX


title: SEQC_ILM_MAY_B_4_L01_AGTTCC_AD0E8UACXX


title: SEQC_ILM_MAY_B_3_L07_TAGCTT_BD0E99ACXX

value: TAGCTT


title: SEQC_ILM_MAY_B_3_L08_TAGCTT_AD0E8UACXX


title: SEQC_ILM_MAY_B_3_L08_TAGCTT_BD0E99ACXX


title: SEQC_ILM_MAY_B_3_L07_TAGCTT_AD0E8UACXX


title: SEQC_ILM_MAY_B_3_L06_TAGCTT_BD0E99ACXX


title: SEQC_ILM_MAY_B_3_L06_TAGCTT_AD0E8UACXX


title: SEQC_ILM_MAY_B_3_L05_TAGCTT_AD0E8UACXX


title: SEQC_ILM_MAY_B_3_L05_TAGCTT_BD0E99ACXX


title: SEQC_ILM_MAY_B_3_L03_TAGCTT_AD0E8UACXX


title: SEQC_ILM_MAY_B_3_L02_TAGCTT_BD0E99ACXX


title: SEQC_ILM_MAY_B_4_L04_AGTTCC_BD0E99ACXX


title: SEQC_ILM_MAY_B_3_L02_TAGCTT_AD0E8UACXX


title: SEQC_ILM_MAY_B_3_L03_TAGCTT_BD0E99ACXX


title: SEQC_ILM_MAY_B_3_L01_TAGCTT_AD0E8UACXX


title: SEQC_ILM_MAY_B_2_L08_GCCAAT_AD0E8UACXX

value: GCCAAT


title: SEQC_ILM_MAY_B_3_L01_TAGCTT_BD0E99ACXX


title: SEQC_ILM_MAY_B_2_L07_GCCAAT_BD0E99ACXX


title: SEQC_ILM_MAY_B_3_L04_TAGCTT_BD0E99ACXX


title: SEQC_ILM_MAY_B_2_L07_GCCAAT_AD0E8UACXX


title: SEQC_ILM_MAY_B_4_L03_AGTTCC_AD0E8UACXX


title: SEQC_ILM_MAY_B_2_L06_GCCAAT_BD0E99ACXX


title: SEQC_ILM_MAY_B_2_L06_GCCAAT_AD0E8UACXX


title: SEQC_ILM_MAY_B_2_L04_GCCAAT_BD0E99ACXX


title: SEQC_ILM_MAY_B_2_L03_GCCAAT_AD0E8UACXX


title: SEQC_ILM_MAY_B_2_L02_GCCAAT_BD0E99ACXX


title: SEQC_ILM_MAY_B_2_L02_GCCAAT_AD0E8UACXX


title: SEQC_ILM_MAY_B_2_L03_GCCAAT_BD0E99ACXX


title: SEQC_ILM_MAY_B_2_L01_GCCAAT_BD0E99ACXX


title: SEQC_ILM_MAY_B_1_L08_CGATGT_BD0E99ACXX

value: CGATGT


title: SEQC_ILM_MAY_B_2_L04_GCCAAT_AD0E8UACXX


title: SEQC_ILM_MAY_B_3_L04_TAGCTT_AD0E8UACXX


title: SEQC_ILM_MAY_B_1_L08_CGATGT_AD0E8UACXX


title: SEQC_ILM_MAY_B_1_L07_CGATGT_BD0E99ACXX


title: SEQC_ILM_MAY_B_2_L05_GCCAAT_AD0E8UACXX


title: SEQC_ILM_MAY_B_2_L01_GCCAAT_AD0E8UACXX


title: SEQC_ILM_MAY_B_1_L07_CGATGT_AD0E8UACXX


title: SEQC_ILM_MAY_B_1_L06_CGATGT_BD0E99ACXX


title: SEQC_ILM_MAY_B_1_L05_CGATGT_BD0E99ACXX


title: SEQC_ILM_MAY_B_1_L06_CGATGT_AD0E8UACXX


title: SEQC_ILM_MAY_B_1_L05_CGATGT_AD0E8UACXX


title: SEQC_ILM_MAY_B_2_L05_GCCAAT_BD0E99ACXX


title: SEQC_ILM_MAY_B_1_L04_CGATGT_AD0E8UACXX


title: SEQC_ILM_MAY_B_2_L08_GCCAAT_BD0E99ACXX


title: SEQC_ILM_MAY_B_1_L04_CGATGT_BD0E99ACXX


title: SEQC_ILM_MAY_B_1_L03_CGATGT_AD0E8UACXX


title: SEQC_ILM_MAY_B_1_L02_CGATGT_AD0E8UACXX


title: SEQC_ILM_MAY_B_1_L03_CGATGT_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L08_CGTACG_AD0E8UACXX

source_name: Universal Human Reference RNA (UHRR) from Stratagene

value: A

value: CGTACG


title: SEQC_ILM_MAY_A_5_L08_CGTACG_BD0E99ACXX


title: SEQC_ILM_MAY_B_1_L01_CGATGT_AD0E8UACXX


title: SEQC_ILM_MAY_B_1_L01_CGATGT_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L05_CGTACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L07_CGTACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_5_L04_CGTACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L06_CGTACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_5_L05_CGTACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_5_L06_CGTACG_BD0E99ACXX


title: SEQC_ILM_MAY_B_1_L02_CGATGT_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L03_CGTACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L02_CGTACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L01_CGTACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L02_CGTACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_5_L01_CGTACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_5_L04_CGTACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_4_L08_AGTCAA_AD0E8UACXX

value: AGTCAA


title: SEQC_ILM_MAY_A_4_L07_AGTCAA_BD0E99ACXX


title: SEQC_ILM_MAY_A_5_L07_CGTACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_4_L06_AGTCAA_BD0E99ACXX


title: SEQC_ILM_MAY_A_4_L07_AGTCAA_AD0E8UACXX


title: SEQC_ILM_MAY_A_4_L05_AGTCAA_AD0E8UACXX


title: SEQC_ILM_MAY_A_4_L06_AGTCAA_AD0E8UACXX


title: SEQC_ILM_MAY_A_4_L04_AGTCAA_BD0E99ACXX


title: SEQC_ILM_MAY_A_4_L03_AGTCAA_AD0E8UACXX


title: SEQC_ILM_MAY_A_4_L02_AGTCAA_BD0E99ACXX


title: SEQC_ILM_MAY_A_4_L03_AGTCAA_BD0E99ACXX


title: SEQC_ILM_MAY_A_4_L02_AGTCAA_AD0E8UACXX


title: SEQC_ILM_MAY_A_4_L01_AGTCAA_AD0E8UACXX


title: SEQC_ILM_MAY_A_3_L08_GATCAG_AD0E8UACXX

value: GATCAG


title: SEQC_ILM_MAY_A_4_L08_AGTCAA_BD0E99ACXX

value: Illumina HiSeq 2000


title: SEQC_ILM_MAY_A_4_L04_AGTCAA_AD0E8UACXX

value: MAY


title: SEQC_ILM_MAY_A_3_L07_GATCAG_AD0E8UACXX


title: SEQC_ILM_MAY_A_5_L03_CGTACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_3_L06_GATCAG_BD0E99ACXX


title: SEQC_ILM_MAY_A_3_L08_GATCAG_BD0E99ACXX


title: SEQC_ILM_MAY_A_4_L01_AGTCAA_BD0E99ACXX


title: SEQC_ILM_MAY_A_3_L06_GATCAG_AD0E8UACXX


title: SEQC_ILM_MAY_A_3_L04_GATCAG_BD0E99ACXX


title: SEQC_ILM_MAY_A_3_L05_GATCAG_BD0E99ACXX


title: SEQC_ILM_MAY_A_3_L04_GATCAG_AD0E8UACXX


title: SEQC_ILM_MAY_A_3_L05_GATCAG_AD0E8UACXX


title: SEQC_ILM_MAY_A_3_L03_GATCAG_BD0E99ACXX


title: SEQC_ILM_MAY_A_3_L03_GATCAG_AD0E8UACXX


title: SEQC_ILM_MAY_A_3_L02_GATCAG_BD0E99ACXX


title: SEQC_ILM_MAY_A_4_L05_AGTCAA_BD0E99ACXX


title: SEQC_ILM_MAY_A_3_L01_GATCAG_BD0E99ACXX


title: SEQC_ILM_MAY_A_3_L02_GATCAG_AD0E8UACXX


title: SEQC_ILM_MAY_A_3_L01_GATCAG_AD0E8UACXX


title: SEQC_ILM_MAY_A_2_L08_ACAGTG_BD0E99ACXX

value: ACAGTG


title: SEQC_ILM_MAY_A_2_L08_ACAGTG_AD0E8UACXX


title: SEQC_ILM_MAY_A_2_L07_ACAGTG_BD0E99ACXX


title: SEQC_ILM_MAY_A_3_L07_GATCAG_BD0E99ACXX


title: SEQC_ILM_MAY_A_2_L07_ACAGTG_AD0E8UACXX


title: SEQC_ILM_MAY_A_2_L06_ACAGTG_BD0E99ACXX


title: SEQC_ILM_MAY_A_2_L05_ACAGTG_AD0E8UACXX


title: SEQC_ILM_MAY_A_2_L05_ACAGTG_BD0E99ACXX


title: SEQC_ILM_MAY_A_2_L02_ACAGTG_BD0E99ACXX


title: SEQC_ILM_MAY_A_2_L03_ACAGTG_BD0E99ACXX


title: SEQC_ILM_MAY_A_2_L02_ACAGTG_AD0E8UACXX


title: SEQC_ILM_MAY_A_2_L03_ACAGTG_AD0E8UACXX


title: SEQC_ILM_MAY_A_2_L01_ACAGTG_AD0E8UACXX


title: SEQC_ILM_MAY_A_2_L04_ACAGTG_BD0E99ACXX


title: SEQC_ILM_MAY_A_2_L01_ACAGTG_BD0E99ACXX


title: SEQC_ILM_MAY_A_1_L08_ATCACG_BD0E99ACXX

value: ATCACG


title: SEQC_ILM_MAY_A_1_L07_ATCACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_1_L06_ATCACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_1_L07_ATCACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_1_L05_ATCACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_1_L08_ATCACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_1_L05_ATCACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_1_L04_ATCACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_1_L04_ATCACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_1_L03_ATCACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_1_L03_ATCACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_1_L06_ATCACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_2_L06_ACAGTG_AD0E8UACXX


title: SEQC_ILM_MAY_A_1_L01_ATCACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_2_L04_ACAGTG_AD0E8UACXX


title: SEQC_ILM_MAY_A_1_L02_ATCACG_BD0E99ACXX


title: SEQC_ILM_MAY_A_1_L02_ATCACG_AD0E8UACXX


title: SEQC_ILM_MAY_A_1_L01_ATCACG_AD0E8UACXX


title: SEQC_ILM_CNL_D_5_L08_ATTCCT_BD0FG1ACXX

source_name: Mix of Sample A (UHRR) and Sample B (HBRR) (1:3)

value: D

value: CNL

value: ATTCCT


title: SEQC_ILM_CNL_D_5_L06_ATTCCT_BD0FG1ACXX


title: SEQC_ILM_CNL_D_5_L07_ATTCCT_AD0FD7ACXX


title: SEQC_ILM_CNL_D_5_L05_ATTCCT_BD0FG1ACXX


title: SEQC_ILM_NVS_C_2_L02_CAGATC_BD08PVACXX

value: C

value: NVS

value: CAGATC


title: SEQC_ILM_CNL_D_5_L03_ATTCCT_AD0FD7ACXX


title: SEQC_ILM_CNL_D_5_L04_ATTCCT_AD0FD7ACXX


title: SEQC_ILM_CNL_D_5_L01_ATTCCT_BD0FG1ACXX


title: SEQC_ILM_CNL_D_5_L02_ATTCCT_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L08_CCGTCC_AD0FD7ACXX

value: CCGTCC


title: SEQC_ILM_CNL_D_5_L05_ATTCCT_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L08_CCGTCC_BD0FG1ACXX


title: SEQC_ILM_CNL_D_4_L07_CCGTCC_BD0FG1ACXX


title: SEQC_ILM_CNL_D_4_L07_CCGTCC_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L05_CCGTCC_BD0FG1ACXX


title: SEQC_ILM_CNL_D_4_L05_CCGTCC_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L06_CCGTCC_BD0FG1ACXX


title: SEQC_ILM_CNL_D_5_L08_ATTCCT_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L01_CCGTCC_BD0FG1ACXX


title: SEQC_ILM_CNL_D_4_L02_CCGTCC_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L08_CTTGTA_AD0FD7ACXX

value: CTTGTA


title: SEQC_ILM_CNL_D_5_L02_ATTCCT_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L07_CTTGTA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_5_L07_ATTCCT_BD0FG1ACXX


title: SEQC_ILM_CNL_D_4_L03_CCGTCC_BD0FG1ACXX


title: SEQC_ILM_CNL_D_4_L04_CCGTCC_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L03_CCGTCC_AD0FD7ACXX


title: SEQC_ILM_CNL_D_3_L08_CTTGTA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L07_CTTGTA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_5_L03_ATTCCT_BD0FG1ACXX


title: SEQC_ILM_CNL_D_5_L04_ATTCCT_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L06_CTTGTA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L05_CTTGTA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L05_CTTGTA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_3_L03_CTTGTA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_3_L04_CTTGTA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_3_L03_CTTGTA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L04_CTTGTA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L02_CTTGTA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_3_L01_CTTGTA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_3_L02_CTTGTA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_3_L01_CTTGTA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L07_ACTTGA_BD0FG1ACXX

value: ACTTGA


title: SEQC_ILM_CNL_D_5_L01_ATTCCT_AD0FD7ACXX


title: SEQC_ILM_CNL_D_2_L05_ACTTGA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L08_ACTTGA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_2_L04_ACTTGA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_2_L08_ACTTGA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L03_ACTTGA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L07_ACTTGA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L02_CCGTCC_AD0FD7ACXX


title: SEQC_ILM_CNL_D_2_L05_ACTTGA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_2_L02_ACTTGA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_2_L01_ACTTGA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L04_ACTTGA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L03_ACTTGA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L01_CCGTCC_AD0FD7ACXX


title: SEQC_ILM_CNL_D_4_L04_CCGTCC_BD0FG1ACXX


title: SEQC_ILM_CNL_D_1_L07_TGACCA_AD0FD7ACXX

value: TGACCA


title: SEQC_ILM_CNL_D_1_L04_TGACCA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_1_L04_TGACCA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L01_ACTTGA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_1_L08_TGACCA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_1_L05_TGACCA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_1_L07_TGACCA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_1_L05_TGACCA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_1_L01_TGACCA_AD0FD7ACXX


title: mpn1Δ yeast

city: Zürich

first: Claus

middle: M

last: Azzalin

address: Otto-Stern-Weg 3

department: Institute of Biochemistry

country: Switzerland

institute: ETH Zürich

data_processing:
Basecalls performed using CASAVA version 1.8.2
Reads were aligned to the human or yeast genome using RUM version 2.0.4
A reference collection consisting of RNA features and (for human samples) features from the RepeatMasker database (http://www.repeatmasker.org) was created
Each aligned read was if possible assigned to one of these features with HTSeq-count, using the "union" method to handle read alignments overlapping multiple features
Reads aligning to multiple positions in the genome were defined to contribute "1/N read" to each position
Genome_build: ASM294v1.17 (yeast), hg19 (human)
Supplementary_files_format_and_content: txt files containing the estimated expression level of each quantified feature

organism: Schizosaccharomyces pombe

source_name: fission yeast

growth_protocol: Logarithmically growing yeast cells  in liquid YES media at 30°C, shaking at 150 rpm; PNFF-derived cells were maintained in DMEM supplemented with 20% fetal bovine serum, non-essential amino acids, penicillin/streptomycin

extract_protocol:
Hot phenol RNA dextraction protocol (Schmitt ME, Brown TA & Trumpower BL (1990) A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae. Nucleic Acids Res. 18: 3091–3092); Trizol reagent was used to isolate total RNA from human cells.
10 µg of total RNA was ligated to Thaliana_lig_2 adaptor oligonucleotides (rArGratcggaagagcgtcgtgtagggaaagag-ddT where r denotes ribonucleotides) using Thaliana tRNA ligase. RNA was purified and treated with 20 U of rSAP (Affymetrix) in rSAP buffer (25 mM Tris-HCl pH 7.5, 50 mM NaCl, 5 mM MgCl2, 1 mM DTT, 1 mM ATP (NEB)) at 37°C for 1 hour in order to remove 2’ phosphates remained on ligated RNA. RNA was fragmented with RNA fragmentation reagent (Ambion). The fragmented RNA was then reverse transcribed using primers complementary to the ligated RACE adaptor. the obtained cDNA was used to construct sequencing library.

tag: strain

tag: genotype/variation

value: mpn1Δ (Mpn1-deficient)


title: SEQC_ILM_CNL_D_1_L03_TGACCA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_1_L02_TGACCA_BD0FG1ACXX


title: SEQC_ILM_CNL_C_5_L08_ACTGAT_BD0FG1ACXX

value: ACTGAT


title: mpn1Δ tU6-C36A

description:
GQY40
PCR product corresponding to tagged U6 snRNA was sequenced.

data_processing:
Basecalls performed using CASAVA version 1.8.2
Adapter sequences were removed using cutadapt
Reads were aligned to the indicated reference sequence using BLAT version 35x1. If applicable, read pairs where any of the reads matches the intron were removed.
Read pairs corresponding to full-length species were retained, and the terminal nucleotide sequence was extracted. The frequency of each terminal nucleotide sequence in the sample was computed.
Supplementary_files_format_and_content: txt files containing the frequency of each terminal nucleotide sequence

growth_protocol: Logarithmically growing yeast cells  in liquid YES media at 30°C, shaking at 150 rpm

extract_protocol:
Hot phenol RNA dextraction protocol (Schmitt ME, Brown TA & Trumpower BL (1990) A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae. Nucleic Acids Res. 18: 3091–3092)
PNK treated total RNA was purified with the RNA clean and concentrator kit (Zymo Research). 120 pmol of 5’ phosphorylated 3’ RACE adapter oligonucleotide (cctatagtgagtcgtattaattctgtgctcgc(tdd)) were mixed with 3 µg of purified RNA and ligated with T4 RNA ligase as above. 1 µg of ligated RNA was reverse-transcribed with Superscript III (Invitrogen) using adapter-specific oligonucleotide (GCGAGCACAGAATTAATACGACT). cDNA was PCR-amplified with the Phusion High-Fidelity PCR kit (Thermo Scientific) and PCR products were sequenced. Primers to amlify U6 snRNA (acactctttccctacacgacgctcttccgatctgatcttcggatcactttggt + ctcggcattcctgctgaaccgctcttccgatctcgcggatccgaattaatacgactcactatagg); Primers to amplify tagged U6 (acactctttccctacacgacgctcttccgatctgatcttcggatcactttgatcttcg + ctcggcattcctgctgaaccgctcttccgatctcgcggatccgaattaatacgactcactatagg)

value: mpn1Δ tU6-C36A


title: SEQC_ILM_CNL_D_1_L03_TGACCA_AD0FD7ACXX

value: Illumina HiSeq 2000


title: SEQC_ILM_CNL_D_1_L02_TGACCA_AD0FD7ACXX


title: tU6-C36A

description:
GQY38
PCR product corresponding to tagged U6 snRNA was sequenced.


title: SEQC_ILM_CNL_D_1_L08_TGACCA_AD0FD7ACXX


title: SEQC_ILM_CNL_D_1_L01_TGACCA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L02_ACTTGA_BD0FG1ACXX


title: SEQC_ILM_CNL_C_5_L08_ACTGAT_AD0FD7ACXX


title: SEQC_ILM_CNL_C_5_L07_ACTGAT_BD0FG1ACXX


title: mpn1Δ tU6wt

description:
GQY39
PCR product corresponding to tagged U6 snRNA was sequenced.

value: mpn1Δ tU6wt


title: SEQC_ILM_CNL_C_5_L07_ACTGAT_AD0FD7ACXX


title: cid16Δ

description:
GQY55
PCR product corresponding to U6 snRNA was sequenced.


title: SEQC_ILM_CNL_D_1_L06_TGACCA_BD0FG1ACXX


title: SEQC_ILM_CNL_D_2_L06_ACTTGA_BD0FG1ACXX


title: SEQC_ILM_CNL_C_5_L05_ACTGAT_BD0FG1ACXX


title: tU6-wt

description:
GQY37
PCR product corresponding to tagged U6 snRNA was sequenced.


title: SEQC_LIF_LIV_F_1_L05_GTAGCGAAGA_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences

molecule: polyA RNA

organism: synthetic construct

source_name: Ambion ERCC Spike-In Control Mix 2

value: F

value: AB 5500 Genetic Analyzer

value: LIV

value: GTAGCGAAGA


title: SEQC_LIF_LIV_F_1_L04_GTAGCGAAGA_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences


title: cid12Δ

description:
GQY54
PCR product corresponding to U6 snRNA was sequenced.


title: wt yeast

value: wild type


title: SEQC_ILM_CNL_C_5_L05_ACTGAT_AD0FD7ACXX

value: C

value: CNL


title: SEQC_LIF_LIV_F_1_L03_GTAGCGAAGA_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_5_L04_ACTGAT_BD0FG1ACXX


title: SEQC_LIF_LIV_E_1_L04_GAATCTAGGG_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences

source_name: Ambion ERCC Spike-In Control Mix 1

value: E

value: GAATCTAGGG


title: SEQC_LIF_LIV_F_1_L01_GTAGCGAAGA_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_LIV_E_1_L05_GAATCTAGGG_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences


title: wt (NO PNK)

description:
GQY51
PCR product corresponding to U6 snRNA was sequenced. PNK treatment was omited

value: wt (NO PNK)


title: SEQC_LIF_LIV_E_1_L02_GAATCTAGGG_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_5_L03_ACTGAT_BD0FG1ACXX


title: SEQC_LIF_LIV_E_1_L01_GAATCTAGGG_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_577_CAGATC_s_8)

description: Test set

data_processing:
Illumina Casava1.7 software used for basecalling and barcode demulplexing.
Magic pipeline, please see the attached supplementary file for details and source code download link
Aceview 2008 gene models for rat
One sample from the training set for agent "CARBON TETRACHLORIDE" was excluded from analysis and data deposition due to sample mislabeling.
Genome_build: RGSC v3.4, identical to Rn4 for the main chromosomes
Supplementary_files_format_and_content: tab-delimited text files include Magic expression indices for each Sample ...

organism: Rattus norvegicus

source_name: Liver

growth_protocol: Upon delivery to testing laboratory male B12 (Crl:CD® (SD)|GS BR) were housed individually in hanging, stainless steel, wire-bottom cages in a ventilated room (temperature, 22±3 ◦C; humidity, 30–70%; 12-h light:12-h dark cycle per day, 6:00 a.m.–6:00 p.m.) and received Certified Rodent Diet #5002 (PMI Feeds Inc.. Richmond, IN); chlorinated tap water was available ad libidum.

extract_protocol:
Automated RNA isolation was performed according to the manufacture’s protocol using the RNeasy Kit from Qiagen (Germantown, MD).
Library preparation including the mRNA enrichment step was performed according to the manufacture’s protocol using the Illumina TruSeq RNA Sample Preparation Kit and SBS Kit v3 (San Diego, CA).  Samples were blinded during the library preparation. Depths of ~23 – 25 million paired-end 100 bp reads were generated for each sample.

treatment_protocol: Animals were acclimated for one week to the testing laboratory prior to dosing.  After dosing, all liver samples were harvested as 100 mg punches using six millimeter disposable biopsy punches. An appropriately staggered schedule was employed so that the harvest times were accurate to ±30 min of the designed dose-to-harvest interval.

tag: tissue

value: liver

value: Sprague-Dawley

value: PPARA

tag: chemical

value: GEMFIBROZIL

tag: dose

value: 700 mg/kg

tag: vehicle

value: CORN OIL 100 %

tag: route

value: ORAL GAVAGE

tag: duration

value: 7 d

value: LIVER

tag: Sex

value: M

value: HiScan SQ


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_578_CTTGTA_s_8)

description: Duplicate library

value: DNA Damage

value: AFLATOXIN B1

value: 0.3 mg/kg

value: CMC .5 %

value: 5 d


title: SEQC_LIF_PSU_F_2_L06_GTCAAGCTTT_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: PSU

value: GTCAAGCTTT


title: SEQC_LIF_PSU_F_2_L06_GTCAAGCTTT_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_576_GCCAAT_s_8)

description: Test set

value: liver

value: Sprague-Dawley

value: PPARA

value: ROSIGLITAZONE


title: SEQC_LIF_PSU_F_2_L05_GTCAAGCTTT_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_F_2_L05_GTCAAGCTTT_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_F_2_L04_GTCAAGCTTT_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_LIV_F_1_L02_GTAGCGAAGA_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences

value: LIV

value: GTAGCGAAGA


title: SEQC_ILM_CNL_C_5_L02_ACTGAT_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: ACTGAT


title: SEQC_ILM_CNL_C_5_L02_ACTGAT_AD0FD7ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_575_ACAGTG_s_8)

description: Test set

value: CLOFIBRIC ACID

value: 448 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE

value: LIVER

value: M

value: HiScan SQ


title: cid11Δ

description:
GQY53
PCR product corresponding to U6 snRNA was sequenced.


title: SEQC_ILM_CNL_C_5_L06_ACTGAT_BD0FG1ACXX


title: SEQC_LIF_PSU_F_2_L03_GTCAAGCTTT_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: PSU

value: GTCAAGCTTT


title: SEQC_ILM_CNL_C_5_L04_ACTGAT_AD0FD7ACXX


title: SEQC_LIF_PSU_F_2_L03_GTCAAGCTTT_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_LIV_E_1_L03_GAATCTAGGG_FC1_23301020_20120502

description: 92 poly-A tailed RNA sequences

value: E

value: LIV

value: GAATCTAGGG


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_574_TGACCA_s_8)

description: Duplicate library

value: liver

value: Sprague-Dawley

value: Control

value: Vehicle

value: CMC .5 %

value: 5 d


title: SEQC_ILM_CNL_C_5_L03_ACTGAT_AD0FD7ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: ACTGAT


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_573_CGATGT_s_8)

description: Test set

value: HMGCOA

value: SIMVASTATIN

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 3 d

value: LIVER

value: M

value: HiScan SQ


title: SEQC_LIF_PSU_F_2_L02_GTCAAGCTTT_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: PSU

value: GTCAAGCTTT


title: SEQC_LIF_PSU_F_2_L02_GTCAAGCTTT_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_572_CTTGTA_s_7)

description: Test set

value: liver

value: Sprague-Dawley

value: LOVASTATIN

value: 450 mg/kg

value: 5 d


title: SEQC_LIF_PSU_F_2_L01_GTCAAGCTTT_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_4_L08_ATGTCA_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: ATGTCA


title: SEQC_LIF_PSU_F_2_L01_GTCAAGCTTT_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_571_CAGATC_s_7)

description: Test set

value: HMGCOA

value: CERIVASTATIN

value: 7 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE


title: SEQC_LIF_PSU_F_1_L06_AGGCGGATGA_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: AGGCGGATGA


title: SEQC_ILM_CNL_C_4_L08_ATGTCA_AD0FD7ACXX


title: SEQC_LIF_PSU_F_1_L06_AGGCGGATGA_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: PSU


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_570_GCCAAT_s_7)

description: Test set

value: liver

value: Sprague-Dawley

value: ER

value: NORETHINDRONE

value: 375 mg/kg

value: LIVER

value: M

value: HiScan SQ


title: SEQC_LIF_PSU_F_2_L04_GTCAAGCTTT_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: GTCAAGCTTT


title: SEQC_LIF_PSU_F_1_L05_AGGCGGATGA_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_F_1_L05_AGGCGGATGA_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_4_L07_ATGTCA_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: ATGTCA


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_569_ACAGTG_s_7)

description: Test set

value: ETHINYLESTRADIOL

value: 10 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 5 d


title: SEQC_LIF_PSU_F_1_L04_AGGCGGATGA_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: PSU

value: AGGCGGATGA


title: SEQC_ILM_CNL_C_4_L07_ATGTCA_AD0FD7ACXX


title: SEQC_LIF_PSU_F_1_L04_AGGCGGATGA_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_568_TGACCA_s_7)

description: Test set

value: liver

value: Sprague-Dawley

value: Control

value: Vehicle

value: 7 d

value: LIVER


title: SEQC_ILM_CNL_C_5_L01_ACTGAT_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: ACTGAT


title: SEQC_LIF_PSU_F_1_L03_AGGCGGATGA_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_5_L01_ACTGAT_AD0FD7ACXX


title: SEQC_LIF_PSU_F_1_L02_AGGCGGATGA_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_F_1_L03_AGGCGGATGA_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_567_CGATGT_s_7)

description: Test set

value: ER

value: BETA-ESTRADIOL

value: 150 mg/kg

value: CORN OIL 100 %

value: M

value: HiScan SQ


title: SEQC_ILM_CNL_C_4_L06_ATGTCA_BD0FG1ACXX

value: ATGTCA


title: SEQC_ILM_CNL_C_4_L05_ATGTCA_AD0FD7ACXX


title: SEQC_LIF_PSU_E_2_L06_ATGGTAACTG_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: PSU

value: ATGGTAACTG


title: SEQC_LIF_PSU_F_1_L01_AGGCGGATGA_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: F

value: AGGCGGATGA


title: SEQC_LIF_PSU_F_1_L01_AGGCGGATGA_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_E_2_L05_ATGGTAACTG_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_565_CAGATC_s_6)

description: Test set

value: liver

value: Sprague-Dawley

value: CAR/PXR

value: FLUCONAZOLE

value: 394 mg/kg

value: ORAL GAVAGE

value: 5 d

value: LIVER


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_566_CTTGTA_s_6)

description: Test set

value: MICONAZOLE

value: 920 mg/kg

value: CORN OIL 100 %

value: M


title: SEQC_ILM_CNL_C_4_L04_ATGTCA_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: ATGTCA


title: SEQC_LIF_PSU_E_2_L05_ATGGTAACTG_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: PSU

value: ATGGTAACTG


title: SEQC_LIF_PSU_E_2_L04_ATGGTAACTG_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_E_2_L04_ATGGTAACTG_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_562_TGACCA_s_6)

description: Duplicate library

value: liver

value: Sprague-Dawley

value: DNA Damage

value: AFLATOXIN B1

value: 0.3 mg/kg

value: CMC .5 %

value: HiScan SQ


title: SEQC_LIF_PSU_F_1_L02_AGGCGGATGA_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: F

value: AGGCGGATGA


title: SEQC_LIF_PSU_E_2_L03_ATGGTAACTG_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_E_2_L03_ATGGTAACTG_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_563_ACAGTG_s_6)

description: Test set

value: Control

value: Vehicle

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M


title: SEQC_ILM_CNL_C_4_L03_ATGTCA_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: ATGTCA


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_561_CGATGT_s_6)

description: Test set

value: liver

value: Sprague-Dawley

value: PPARA

value: GEMFIBROZIL

value: 700 mg/kg

value: 7 d


title: SEQC_ILM_CNL_C_4_L05_ATGTCA_BD0FG1ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_564_GCCAAT_s_6)

description: Test set

value: CAR/PXR

value: CLOTRIMAZOLE

value: 89 mg/kg

value: HiScan SQ


title: SEQC_LIF_PSU_E_2_L02_ATGGTAACTG_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: PSU

value: ATGGTAACTG


title: SEQC_ILM_CNL_C_4_L02_ATGTCA_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000


title: SEQC_ILM_CNL_C_4_L04_ATGTCA_AD0FD7ACXX

value: CNL

value: ATGTCA


title: SEQC_LIF_PSU_E_2_L06_ATGGTAACTG_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_E_2_L02_ATGGTAACTG_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_560_CTTGTA_s_5)

description: Test set

value: liver

value: Sprague-Dawley

value: ROSIGLITAZONE

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_559_CAGATC_s_5)

description: Test set

value: PPARA

value: CLOFIBRIC ACID

value: 448 mg/kg

value: HiScan SQ


title: SEQC_LIF_PSU_E_1_L06_GGCTCACCGC_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: PSU

value: GGCTCACCGC


title: SEQC_LIF_PSU_E_1_L06_GGCTCACCGC_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_E_2_L01_ATGGTAACTG_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: ATGGTAACTG


title: SEQC_ILM_CNL_C_4_L01_ATGTCA_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: ATGTCA


title: SEQC_LIF_PSU_E_1_L05_GGCTCACCGC_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_4_L01_ATGTCA_AD0FD7ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_558_GCCAAT_s_5)

description: Duplicate library

value: liver

value: Sprague-Dawley

value: Control

value: Vehicle

value: CMC .5 %

value: ORAL GAVAGE


title: SEQC_LIF_PSU_E_2_L01_ATGGTAACTG_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_557_ACAGTG_s_5)

description: Test set

value: HMGCOA

value: SIMVASTATIN

value: CORN OIL 100 %

value: 3 d

value: LIVER

value: M


title: SEQC_LIF_PSU_E_1_L05_GGCTCACCGC_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: PSU

value: GGCTCACCGC


title: SEQC_ILM_CNL_C_3_L08_GGCTAC_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: GGCTAC


title: SEQC_ILM_CNL_C_4_L03_ATGTCA_AD0FD7ACXX

value: ATGTCA


title: SEQC_LIF_PSU_E_1_L04_GGCTCACCGC_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_E_1_L04_GGCTCACCGC_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_556_TGACCA_s_5)

description: Test set

value: liver

value: Sprague-Dawley

value: LOVASTATIN

value: 450 mg/kg

value: 5 d

value: HiScan SQ


title: SEQC_LIF_PSU_E_1_L03_GGCTCACCGC_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_E_1_L03_GGCTCACCGC_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_E_1_L02_GGCTCACCGC_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_555_CGATGT_s_5)

description: Test set

value: HMGCOA

value: CERIVASTATIN

value: 7 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE

value: LIVER


title: SEQC_ILM_CNL_C_4_L02_ATGTCA_AD0FD7ACXX

value: C


title: SEQC_LIF_PSU_E_1_L02_GGCTCACCGC_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: PSU

value: GGCTCACCGC


title: SEQC_ILM_CNL_C_3_L07_GGCTAC_BD0FG1ACXX

value: Illumina HiSeq 2000

value: CNL

value: GGCTAC


title: SEQC_ILM_CNL_C_3_L07_GGCTAC_AD0FD7ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_548_CTTGTA_s_3)

description: Test set

value: liver

value: Sprague-Dawley

value: CAR/PXR

value: CLOTRIMAZOLE

value: 89 mg/kg

value: M


title: SEQC_LIF_PSU_E_1_L01_GGCTCACCGC_FC1_23302023_20120308

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_547_CAGATC_s_3)

description: Test set

value: Control

value: Vehicle

value: CORN OIL 100 %

value: 5 d

value: HiScan SQ


title: SEQC_ILM_CNL_C_3_L06_GGCTAC_BD0FG1ACXX

value: C


title: SEQC_LIF_PSU_E_1_L01_GGCTCACCGC_FC2_23302023_20120308

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: PSU


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_546_GCCAAT_s_3)

description: Duplicate library

value: DNA Damage

value: AFLATOXIN B1

value: 0.3 mg/kg

value: CMC .5 %

value: ORAL GAVAGE

value: LIVER


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_545_ACAGTG_s_3)

description: Test set

value: liver

value: Sprague-Dawley

value: PPARA

value: GEMFIBROZIL

value: 700 mg/kg

value: 7 d


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_544_TGACCA_s_3)

description: Test set

value: ROSIGLITAZONE

value: CORN OIL 100 %

value: 5 d

value: M

value: HiScan SQ


title: SEQC_LIF_NWU_F_2_L04_GTCAAGCTTT_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: NWU

value: GTCAAGCTTT


title: SEQC_LIF_NWU_F_2_L03_GTCAAGCTTT_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_F_2_L05_GTCAAGCTTT_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_F_2_L05_GTCAAGCTTT_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_F_2_L06_GTCAAGCTTT_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_F_2_L06_GTCAAGCTTT_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_3_L04_GGCTAC_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: GGCTAC


title: SEQC_LIF_NWU_F_2_L04_GTCAAGCTTT_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_3_L05_GGCTAC_AD0FD7ACXX


title: SEQC_ILM_CNL_C_3_L05_GGCTAC_BD0FG1ACXX


title: SEQC_ILM_CNL_C_3_L08_GGCTAC_AD0FD7ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_543_CGATGT_s_3)

description: Test set

value: liver

value: Sprague-Dawley

value: PPARA

value: CLOFIBRIC ACID

value: 448 mg/kg

value: ORAL GAVAGE

value: LIVER


title: SEQC_ILM_CNL_C_3_L04_GGCTAC_AD0FD7ACXX


title: SEQC_LIF_NWU_F_2_L01_GTCAAGCTTT_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_F_2_L02_GTCAAGCTTT_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_542_CTTGTA_s_2)

description: Duplicate library

value: Control

value: Vehicle

value: CMC .5 %

value: 5 d

value: M


title: SEQC_ILM_CNL_C_3_L03_GGCTAC_BD0FG1ACXX


title: SEQC_LIF_NWU_F_2_L01_GTCAAGCTTT_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: NWU

value: GTCAAGCTTT


title: SEQC_LIF_NWU_F_2_L02_GTCAAGCTTT_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_541_CAGATC_s_2)

description: Test set

value: HMGCOA

value: SIMVASTATIN

value: CORN OIL 100 %

value: 3 d

value: HiScan SQ


title: SEQC_ILM_CNL_C_3_L03_GGCTAC_AD0FD7ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: GGCTAC


title: SEQC_LIF_NWU_F_1_L06_ATGGTAACTG_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: ATGGTAACTG


title: SEQC_LIF_NWU_F_1_L06_ATGGTAACTG_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_3_L02_GGCTAC_BD0FG1ACXX


title: SEQC_LIF_NWU_F_2_L03_GTCAAGCTTT_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_F_1_L05_ATGGTAACTG_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_539_ACAGTG_s_2)

description: Test set

value: liver

value: Sprague-Dawley

value: CERIVASTATIN

value: 7 mg/kg

value: ORAL GAVAGE

value: LIVER


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_540_GCCAAT_s_2)

description: Test set

value: LOVASTATIN

value: 450 mg/kg

value: 5 d

value: M


title: SEQC_LIF_NWU_F_1_L04_ATGGTAACTG_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: NWU


title: SEQC_LIF_NWU_F_1_L05_ATGGTAACTG_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_3_L01_GGCTAC_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000


title: SEQC_LIF_NWU_F_1_L02_ATGGTAACTG_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_F_1_L03_ATGGTAACTG_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_538_TGACCA_s_2)

description: Test set

value: ER

value: NORETHINDRONE

value: 375 mg/kg

value: CORN OIL 100 %

value: HiScan SQ


title: SEQC_ILM_CNL_C_2_L08_CAGATC_BD0FG1ACXX

value: CNL

value: CAGATC


title: SEQC_LIF_NWU_F_1_L02_ATGGTAACTG_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: ATGGTAACTG


title: SEQC_LIF_NWU_F_1_L01_ATGGTAACTG_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_3_L01_GGCTAC_AD0FD7ACXX

value: GGCTAC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_536_CTTGTA_s_1)

description: Test set

value: liver

value: Sprague-Dawley

value: Control

value: Vehicle

value: ORAL GAVAGE

value: LIVER


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_535_CAGATC_s_1)

description: Test set

value: BETA-ESTRADIOL

value: 150 mg/kg

value: 5 d

value: M


title: SEQC_LIF_NWU_F_1_L01_ATGGTAACTG_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: NWU


title: SEQC_ILM_CNL_C_2_L08_CAGATC_AD0FD7ACXX

value: C

value: Illumina HiSeq 2000

value: CNL


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_537_CGATGT_s_2)

description: Test set

value: ER

value: ETHINYLESTRADIOL

value: 10 mg/kg

value: CORN OIL 100 %

value: HiScan SQ


title: SEQC_LIF_NWU_E_2_L06_AGGCGGATGA_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: E

value: AGGCGGATGA


title: SEQC_LIF_NWU_E_2_L06_AGGCGGATGA_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_2_L07_CAGATC_BD0FG1ACXX

value: CAGATC


title: SEQC_LIF_NWU_E_2_L05_AGGCGGATGA_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_E_2_L04_AGGCGGATGA_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_2_L07_CAGATC_AD0FD7ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_534_GCCAAT_s_1)

description: Test set

value: liver

value: Sprague-Dawley

value: CAR/PXR

value: MICONAZOLE

value: 920 mg/kg

value: ORAL GAVAGE

value: LIVER


title: SEQC_LIF_NWU_E_2_L05_AGGCGGATGA_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: AB 5500 Genetic Analyzer

value: NWU


title: SEQC_LIF_NWU_E_2_L03_AGGCGGATGA_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_F_1_L04_ATGGTAACTG_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: F

value: ATGGTAACTG


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_533_ACAGTG_s_1)

description: Test set

value: FLUCONAZOLE

value: 394 mg/kg

value: 5 d

value: M


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_532_TGACCA_s_1)

description: Test set

value: CLOTRIMAZOLE

value: 89 mg/kg

value: CORN OIL 100 %

value: HiScan SQ


title: SEQC_ILM_CNL_C_2_L06_CAGATC_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: CAGATC


title: SEQC_ILM_CNL_C_2_L05_CAGATC_BD0FG1ACXX


title: SEQC_LIF_NWU_E_2_L03_AGGCGGATGA_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: E

value: AGGCGGATGA


title: SEQC_ILM_CNL_C_3_L02_GGCTAC_AD0FD7ACXX

value: GGCTAC


title: SEQC_LIF_NWU_E_2_L02_AGGCGGATGA_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: AB 5500 Genetic Analyzer

value: NWU


title: SEQC_ILM_CNL_C_2_L05_CAGATC_AD0FD7ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC098LACXX_554_CTTGTA_s_7)

description: Test set

value: liver

value: Sprague-Dawley

value: ER

value: NORETHINDRONE

value: 375 mg/kg

value: ORAL GAVAGE

value: LIVER

value: 2x50 nt


title: SEQC_LIF_NWU_E_2_L01_AGGCGGATGA_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_E_2_L01_AGGCGGATGA_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_E_1_L06_GGCTCACCGC_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: GGCTCACCGC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC098LACXX_553_CAGATC_s_7)

description: Test set

value: ETHINYLESTRADIOL

value: 10 mg/kg

value: CORN OIL 100 %

value: 5 d

value: M

value: HiScan SQ


title: SEQC_LIF_NWU_E_1_L06_GGCTCACCGC_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer


title: SEQC_LIF_NWU_E_1_L05_GGCTCACCGC_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: NWU


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC098LACXX_552_GCCAAT_s_7)

description: Test set

value: liver

value: Sprague-Dawley

value: Control

value: Vehicle


title: SEQC_LIF_NWU_E_1_L05_GGCTCACCGC_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_2_L04_CAGATC_AD0FD7ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: CAGATC


title: SEQC_ILM_CNL_C_2_L04_CAGATC_BD0FG1ACXX


title: SEQC_LIF_NWU_E_1_L04_GGCTCACCGC_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: GGCTCACCGC


title: SEQC_LIF_NWU_F_1_L03_ATGGTAACTG_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: F

value: ATGGTAACTG


title: SEQC_LIF_NWU_E_2_L04_AGGCGGATGA_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: AGGCGGATGA


title: SEQC_ILM_CNL_C_2_L03_CAGATC_BD0FG1ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC098LACXX_551_ACAGTG_s_7)

description: Test set

value: ER

value: BETA-ESTRADIOL

value: 150 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M

value: 2x50 nt


title: SEQC_LIF_NWU_E_1_L03_GGCTCACCGC_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: NWU


title: SEQC_LIF_NWU_E_1_L03_GGCTCACCGC_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_E_1_L04_GGCTCACCGC_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_E_2_L02_AGGCGGATGA_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC098LACXX_550_TGACCA_s_7)

description: Test set

value: liver

value: Sprague-Dawley

value: CAR/PXR

value: MICONAZOLE

value: 920 mg/kg

value: HiScan SQ


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC0HK2ACXX_531_CGATGT_s_1)

description: Test set

value: Control

value: Vehicle


title: SEQC_LIF_NWU_E_1_L02_GGCTCACCGC_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: GGCTCACCGC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AC098LACXX_549_CGATGT_s_7)

description: Test set

value: FLUCONAZOLE

value: 394 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE


title: SEQC_LIF_NWU_E_1_L01_GGCTCACCGC_FC2_NWU00001_20120220

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_2_L02_CAGATC_AD0FD7ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: CAGATC


title: SEQC_ILM_CNL_C_2_L03_CAGATC_AD0FD7ACXX


title: SEQC_ILM_CNL_C_2_L02_CAGATC_BD0FG1ACXX


title: SEQC_LIF_NWU_E_1_L01_GGCTCACCGC_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: NWU


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_99430_L_LEF_NU_OG_TTAGGC_s_5)

description: Training Set

value: liver

value: Sprague-Dawley

value: AhR

value: LEFLUNOMIDE

value: 60 mg/kg

value: 5 d

value: LIVER

value: M


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_99596_L_CTL_NN_IP_GATCAG_s_1)

description: Training Set

value: Control

value: Vehicle

value: RSA/SALINE .1 %

value: INTRAPERITONEAL

value: 1 d

value: HiScan SQ


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_99612_L_CTL_NN_IP_GATCAG_s_2)

description: Training Set


title: SEQC_ILM_CNL_C_2_L01_CAGATC_AD0FD7ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: CAGATC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_99728_L_CTL_NN_IP_ACTTGA_s_6)

description: Training Set

value: liver

value: Sprague-Dawley

value: SALINE 100 %


title: SEQC_ILM_CNL_C_2_L01_CAGATC_BD0FG1ACXX


title: SEQC_ILM_CNL_C_1_L08_TTAGGC_BD0FG1ACXX

value: TTAGGC


title: SEQC_ILM_CNL_C_1_L08_TTAGGC_AD0FD7ACXX


title: SEQC_LIF_SQW_F_2_L03_AAAAGGGTTA_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: F

value: AB 5500 Genetic Analyzer

value: SQW

value: AAAAGGGTTA


title: SEQC_LIF_SQW_F_2_L05_AAAAGGGTTA_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_2_L06_AAAAGGGTTA_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_2_L04_AAAAGGGTTA_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_2_L06_AAAAGGGTTA_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_2_L05_AAAAGGGTTA_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_2_L03_AAAAGGGTTA_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_99358_L_LEF_NU_OG_TTAGGC_s_6)

description: Training Set

value: AhR

value: LEFLUNOMIDE

value: 60 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M


title: SEQC_LIF_SQW_F_2_L02_AAAAGGGTTA_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_1_L07_TTAGGC_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL


title: SEQC_LIF_SQW_F_2_L02_AAAAGGGTTA_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_99414_L_LEF_NU_OG_TTAGGC_s_4)

description: Training Set

value: liver

value: Sprague-Dawley

value: HiScan SQ


title: SEQC_LIF_NWU_E_1_L02_GGCTCACCGC_FC1_NWU00001_20120220

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: NWU

value: GGCTCACCGC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98741_L_CTL_NN_OG_GGCTAC_s_3)

description: Training Set

value: Control

value: Vehicle

value: CMC .5 %


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98681_L_CTL_NN_IP_CAGATC_s_4)

description: Training Set

value: SALINE 100 %

value: INTRAPERITONEAL

value: 1 d


title: SEQC_ILM_CNL_C_1_L06_TTAGGC_BD0FG1ACXX

value: TTAGGC


title: SEQC_LIF_SQW_F_1_L06_GTCGTCTTAG_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: F

value: SQW

value: GTCGTCTTAG


title: SEQC_LIF_SQW_F_1_L06_GTCGTCTTAG_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_2_L04_AAAAGGGTTA_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: AAAAGGGTTA


title: SEQC_LIF_SQW_F_1_L05_GTCGTCTTAG_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_1_L05_TTAGGC_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL


title: SEQC_LIF_SQW_F_1_L05_GTCGTCTTAG_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: AB 5500 Genetic Analyzer


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98619_L_CTL_NN_OG_TAGCTT_s_2)

description: Training Set

value: liver

value: Sprague-Dawley

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98611_L_CTL_NN_IP_CAGATC_s_5)

description: Training Set

value: Control

value: Vehicle

value: SALINE 100 %

value: INTRAPERITONEAL


title: SEQC_LIF_SQW_F_1_L04_GTCGTCTTAG_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: F

value: SQW

value: GTCGTCTTAG


title: SEQC_ILM_CNL_C_1_L04_TTAGGC_AD0FD7ACXX

value: C

value: Illumina HiSeq 2000

value: TTAGGC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98524_L_NAP_NN_OG_CGATGT_s_2)

description: Training Set

value: liver

value: AhR

value: BETA-NAPHTHOFLAVONE

value: CMC .5 %


title: SEQC_LIF_SQW_F_1_L02_GTCGTCTTAG_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: AB 5500 Genetic Analyzer


title: SEQC_LIF_SQW_F_1_L03_GTCGTCTTAG_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_1_L02_GTCGTCTTAG_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_1_L03_GTCGTCTTAG_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_2_L01_AAAAGGGTTA_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: AAAAGGGTTA


title: SEQC_LIF_SQW_F_1_L01_GTCGTCTTAG_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_1_L05_TTAGGC_AD0FD7ACXX

value: CNL


title: SEQC_ILM_CNL_C_1_L03_TTAGGC_BD0FG1ACXX


title: SEQC_LIF_SQW_F_2_L01_AAAAGGGTTA_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_F_1_L01_GTCGTCTTAG_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_E_2_L06_TATCGTGAGT_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: E

value: TATCGTGAGT


title: SEQC_ILM_CNL_C_1_L07_TTAGGC_AD0FD7ACXX


title: SEQC_ILM_CNL_C_1_L03_TTAGGC_AD0FD7ACXX


title: SEQC_ILM_CNL_C_1_L04_TTAGGC_BD0FG1ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98449_L_NAP_NN_OG_CGATGT_s_1)

description: Training Set

value: Sprague-Dawley

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: SEQC_LIF_SQW_E_2_L05_TATCGTGAGT_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: SQW


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98432_L_CTL_NN_OG_TAGCTT_s_1)

description: Training Set

value: Control

value: Vehicle


title: SEQC_LIF_SQW_F_1_L04_GTCGTCTTAG_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: F

value: GTCGTCTTAG


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98388_L_3ME_NN_OG_ATCACG_s_3)

description: Training Set

value: liver

value: AhR

value: 300 mg/kg

value: CMC .5 %


title: SEQC_ILM_CNL_C_1_L02_TTAGGC_BD0FG1ACXX

value: C

value: Illumina HiSeq 2000

value: CNL

value: TTAGGC


title: SEQC_LIF_SQW_E_2_L06_TATCGTGAGT_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: TATCGTGAGT


title: SEQC_LIF_SQW_E_2_L05_TATCGTGAGT_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_E_2_L04_TATCGTGAGT_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98377_L_NAP_NN_OG_CGATGT_s_3)

description: Training Set

value: Sprague-Dawley

value: BETA-NAPHTHOFLAVONE

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98512_L_3ME_NN_OG_ATCACG_s_1)

description: Training Set

value: liver

value: AhR


title: SEQC_LIF_SQW_E_2_L04_TATCGTGAGT_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: SQW


title: SEQC_ILM_CNL_C_1_L02_TTAGGC_AD0FD7ACXX

value: C


title: SEQC_LIF_SQW_E_2_L03_TATCGTGAGT_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_E_2_L02_TATCGTGAGT_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_C_1_L01_TTAGGC_BD0FG1ACXX

value: Illumina HiSeq 2000


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_97577_L_ECO_NU_OG_TGACCA_s_4)

description: Training Set

value: CAR/PXR

value: ECONAZOLE

value: 334 mg/kg

value: CORN OIL 100 %


title: SEQC_ILM_CNL_C_1_L01_TTAGGC_AD0FD7ACXX

value: CNL

value: TTAGGC


title: SEQC_ILM_CNL_B_5_L08_GAGTGG_BD0FG1ACXX

value: B

value: GAGTGG


title: SEQC_LIF_SQW_E_2_L01_TATCGTGAGT_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: TATCGTGAGT


title: SEQC_ILM_CNL_B_5_L08_GAGTGG_AD0FD7ACXX


title: SEQC_LIF_SQW_E_1_L06_CTGTTATACC_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: CTGTTATACC


title: SEQC_LIF_SQW_E_2_L01_TATCGTGAGT_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_E_2_L03_TATCGTGAGT_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_97849_L_PHE_NN_OG_ACAGTG_s_3)

description: Training Set

value: liver

value: Sprague-Dawley

value: PHENOBARBITAL

value: 54 mg/kg

value: WATER 100 %

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: SEQC_LIF_SQW_E_2_L02_TATCGTGAGT_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: SQW


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_97266_L_ECO_NU_OG_TGACCA_s_6)

description: Training Set

value: CAR/PXR

value: ECONAZOLE

value: 334 mg/kg

value: CORN OIL 100 %


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_97186_L_ECO_NU_OG_TGACCA_s_5)

description: Training Set


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_50944_L_MET_NN_OG_GCCAAT_s_4)

description: Training Set

value: METHIMAZOLE

value: 100 mg/kg

value: 3 d


title: SEQC_LIF_SQW_E_1_L06_CTGTTATACC_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: CTGTTATACC


title: SEQC_LIF_SQW_E_1_L02_CTGTTATACC_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_E_1_L05_CTGTTATACC_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_5_L07_GAGTGG_BD0FG1ACXX

value: B

value: Illumina HiSeq 2000

value: CNL

value: GAGTGG


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99846_L_CHL_NU_OG_CGATGT_s_6)

description: Training Set

value: liver

value: Sprague-Dawley

value: Cytotoxic

value: CHLOROFORM

value: 600 mg/kg

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_50980_L_MET_NN_OG_GCCAAT_s_5)

description: Training Set

value: CAR/PXR

value: METHIMAZOLE

value: 100 mg/kg

value: WATER 100 %

value: 3 d

value: HiScan SQ


title: SEQC_LIF_SQW_E_1_L05_CTGTTATACC_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: SQW

value: CTGTTATACC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_51024_L_MET_NN_OG_GCCAAT_s_6)

description: Training Set

value: liver

value: Sprague-Dawley


title: SEQC_LIF_SQW_E_1_L04_CTGTTATACC_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB029JACXX_98326_L_3ME_NN_OG_ATCACG_s_2)

description: Training Set

value: AhR

value: 300 mg/kg

value: CMC .5 %


title: SEQC_LIF_SQW_E_1_L01_CTGTTATACC_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_5_L07_GAGTGG_AD0FD7ACXX

value: B

value: Illumina HiSeq 2000

value: CNL

value: GAGTGG


title: SEQC_ILM_CNL_B_5_L06_GAGTGG_BD0FG1ACXX


title: SEQC_LIF_SQW_E_1_L03_CTGTTATACC_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_E_1_L03_CTGTTATACC_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_5_L05_GAGTGG_BD0FG1ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99844_L_CHL_NU_OG_CGATGT_s_5)

description: Training Set

value: Cytotoxic

value: CHLOROFORM

value: 600 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M


title: SEQC_ILM_CNL_B_5_L04_GAGTGG_BD0FG1ACXX


title: SEQC_LIF_SQW_E_1_L04_CTGTTATACC_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences

value: E

value: AB 5500 Genetic Analyzer

value: SQW

value: CTGTTATACC


title: SEQC_ILM_CNL_B_5_L04_GAGTGG_AD0FD7ACXX


title: SEQC_LIF_SQW_E_1_L02_CTGTTATACC_FC1_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_LIV_D_5_L02_GGGTCGGTAT_FC1_23301020_20120502

value: D

value: LIV

value: GGGTCGGTAT


title: SEQC_ILM_CNL_B_5_L05_GAGTGG_AD0FD7ACXX

value: B

value: Illumina HiSeq 2000

value: CNL


title: SEQC_LIF_SQW_E_1_L01_CTGTTATACC_FC2_23311016_20120217

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_LIV_D_5_L04_GGGTCGGTAT_FC1_23301020_20120502


title: SEQC_LIF_LIV_D_5_L05_GGGTCGGTAT_FC1_23301020_20120502


title: SEQC_LIF_LIV_D_1_L05_AGCTTACTAC_FC1_23301020_20120502

value: AGCTTACTAC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99746_L_NIT_NN_IP_TGACCA_s_1)

description: Training Set

value: liver

value: Sprague-Dawley

value: DNA Damage

value: N-NITROSODIMETHYLAMINE

value: 10 mg/kg

value: SALINE 100 %

value: INTRAPERITONEAL

value: HiScan SQ


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99697_L_NIT_NN_IP_TGACCA_s_3)

description: Training Set

value: 5 d

value: LIVER

value: M


title: SEQC_LIF_LIV_D_1_L02_AGCTTACTAC_FC1_23301020_20120502

value: D

value: AB 5500 Genetic Analyzer

value: LIV


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99586_L_IFO_NN_OG_TGACCA_s_5)

description: Training Set

value: IFOSFAMIDE

value: 143 mg/kg

value: ORAL GAVAGE

value: 3 d


title: SEQC_LIF_LIV_C_5_L05_GCGGTGCTTG_FC1_23301020_20120502

value: C

value: GCGGTGCTTG


title: SEQC_LIF_LIV_D_1_L01_AGCTTACTAC_FC1_23301020_20120502

value: AGCTTACTAC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99747_L_NIT_NN_IP_TGACCA_s_2)

description: Training Set

value: liver

value: Sprague-Dawley

value: DNA Damage

value: N-NITROSODIMETHYLAMINE

value: 10 mg/kg


title: SEQC_LIF_LIV_D_5_L01_GGGTCGGTAT_FC1_23301020_20120502

value: GGGTCGGTAT


title: SEQC_LIF_LIV_D_1_L04_AGCTTACTAC_FC1_23301020_20120502


title: SEQC_LIF_LIV_D_1_L03_AGCTTACTAC_FC1_23301020_20120502


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99564_L_IFO_NN_OG_TGACCA_s_4)

description: Training Set

value: SALINE 100 %

value: LIVER

value: M

value: HiScan SQ


title: SEQC_ILM_CNL_B_5_L02_GAGTGG_BD0FG1ACXX

value: B

value: Illumina HiSeq 2000

value: CNL

value: GAGTGG


title: SEQC_ILM_CNL_B_5_L03_GAGTGG_AD0FD7ACXX


title: SEQC_LIF_LIV_C_5_L04_GCGGTGCTTG_FC1_23301020_20120502

value: C

value: AB 5500 Genetic Analyzer

value: LIV


title: SEQC_LIF_LIV_C_1_L05_CAGCAAACTT_FC1_23301020_20120502

value: CAGCAAACTT


title: SEQC_LIF_LIV_C_5_L02_GCGGTGCTTG_FC1_23301020_20120502

value: GCGGTGCTTG


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99534_L_IFO_NN_OG_TGACCA_s_6)

description: Training Set

value: liver

value: Sprague-Dawley

value: DNA Damage

value: IFOSFAMIDE

value: 143 mg/kg

value: ORAL GAVAGE

value: 3 d


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99336_L_AFL_NN_OG_ATCACG_s_8)

description: Training Set

value: AFLATOXIN B1

value: 0.3 mg/kg

value: CMC .5 %

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: SEQC_ILM_CNL_B_4_L08_AGTTCC_BD0FG1ACXX

value: B

value: Illumina HiSeq 2000

value: CNL

value: AGTTCC


title: SEQC_LIF_LIV_C_1_L03_CAGCAAACTT_FC1_23301020_20120502

value: C

value: AB 5500 Genetic Analyzer

value: LIV

value: CAGCAAACTT


title: SEQC_LIF_LIV_C_1_L02_CAGCAAACTT_FC1_23301020_20120502


title: SEQC_LIF_LIV_D_5_L03_GGGTCGGTAT_FC1_23301020_20120502

value: D

value: GGGTCGGTAT


title: SEQC_ILM_CNL_B_5_L01_GAGTGG_BD0FG1ACXX

value: GAGTGG


title: SEQC_LIF_LIV_B_5_L05_GAGAAGATGA_FC1_23301020_20120502

value: GAGAAGATGA


title: SEQC_ILM_CNL_B_4_L08_AGTTCC_AD0FD7ACXX


title: SEQC_LIF_LIV_B_5_L04_GAGAAGATGA_FC1_23301020_20120502


title: SEQC_LIF_LIV_C_1_L01_CAGCAAACTT_FC1_23301020_20120502


title: SEQC_LIF_LIV_B_5_L03_GAGAAGATGA_FC1_23301020_20120502


title: SEQC_LIF_LIV_B_5_L02_GAGAAGATGA_FC1_23301020_20120502


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99320_L_AFL_NN_OG_ATCACG_s_1)

description: Training Set

value: liver

value: Sprague-Dawley

value: DNA Damage

value: AFLATOXIN B1

value: 0.3 mg/kg

value: CMC .5 %

value: ORAL GAVAGE


title: SEQC_ILM_CNL_B_4_L07_AGTTCC_AD0FD7ACXX

value: B

value: Illumina HiSeq 2000

value: CNL


title: SEQC_ILM_CNL_B_5_L02_GAGTGG_AD0FD7ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98911_L_NAF_NU_OG_GCCAAT_s_5)

description: Training Set

value: PPARA

value: NAFENOPIN

value: 338 mg/kg

value: CORN OIL 100 %

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98864_L_NAF_NU_OG_GCCAAT_s_7)

description: Training Set

value: liver

value: Sprague-Dawley


title: SEQC_ILM_CNL_B_4_L07_AGTTCC_BD0FG1ACXX

value: AGTTCC


title: SEQC_ILM_CNL_B_4_L06_AGTTCC_BD0FG1ACXX


title: SEQC_LIF_LIV_B_1_L05_CGGGAGCCCG_FC1_23301020_20120502

value: AB 5500 Genetic Analyzer

value: LIV

value: CGGGAGCCCG


title: SEQC_LIF_LIV_B_1_L04_CGGGAGCCCG_FC1_23301020_20120502

value: B


title: SEQC_LIF_LIV_B_1_L03_CGGGAGCCCG_FC1_23301020_20120502


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98858_L_CAR_NU_OG_ACAGTG_s_3)

description: Training Set

value: Cytotoxic

value: CARBON TETRACHLORIDE

value: ORAL GAVAGE

value: 7 d


title: SEQC_LIF_LIV_B_5_L01_GAGAAGATGA_FC1_23301020_20120502

value: GAGAAGATGA


title: SEQC_LIF_LIV_B_1_L01_CGGGAGCCCG_FC1_23301020_20120502


title: SEQC_ILM_CNL_B_4_L04_AGTTCC_BD0FG1ACXX

value: Illumina HiSeq 2000

value: CNL


title: SEQC_LIF_LIV_A_5_L05_GTGCGGTTCC_FC1_23301020_20120502

value: A

value: GTGCGGTTCC


title: SEQC_LIF_LIV_A_5_L04_GTGCGGTTCC_FC1_23301020_20120502


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98873_L_CAR_NU_OG_ACAGTG_s_4)

description: Training Set

value: CORN OIL 100 %

value: LIVER

value: M

value: HiScan SQ


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98848_L_CTL_NU_OG_GCCAAT_s_8)

description: Training Set

value: liver

value: Sprague-Dawley

value: Control

value: Vehicle


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98842_L_NAF_NU_OG_GCCAAT_s_6)

description: Training Set

value: PPARA

value: NAFENOPIN

value: 338 mg/kg

value: 5 d


title: SEQC_LIF_LIV_A_5_L02_GTGCGGTTCC_FC1_23301020_20120502

value: AB 5500 Genetic Analyzer

value: LIV


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98800_L_BEZ_NU_OG_ACAGTG_s_6)

description: Training Set

value: BEZAFIBRATE

value: 617 mg/kg

value: ORAL GAVAGE

value: 7 d


title: SEQC_LIF_LIV_A_5_L01_GTGCGGTTCC_FC1_23301020_20120502

value: A

value: GTGCGGTTCC


title: SEQC_ILM_CNL_B_4_L05_AGTTCC_BD0FG1ACXX

value: B

value: Illumina HiSeq 2000

value: CNL

value: AGTTCC


title: SEQC_LIF_LIV_A_5_L03_GTGCGGTTCC_FC1_23301020_20120502


title: SEQC_ILM_CNL_B_4_L03_AGTTCC_BD0FG1ACXX


title: SEQC_LIF_LIV_A_1_L05_AACATGATGA_FC1_23301020_20120502

value: AACATGATGA


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98726_L_THI_NN_IP_CGATGT_s_3)

description: Training Set

value: liver

value: Sprague-Dawley

value: Cytotoxic

value: THIOACETAMIDE

value: 200 mg/kg

value: SALINE 100 %

value: INTRAPERITONEAL

value: LIVER

value: M

value: HiScan SQ


title: SEQC_LIF_LIV_A_1_L04_AACATGATGA_FC1_23301020_20120502

value: A

value: AB 5500 Genetic Analyzer

value: LIV


title: SEQC_ILM_CNL_B_4_L03_AGTTCC_AD0FD7ACXX

value: B

value: Illumina HiSeq 2000


title: SEQC_LIF_LIV_A_1_L03_AACATGATGA_FC1_23301020_20120502


title: SEQC_ILM_CNL_B_4_L05_AGTTCC_AD0FD7ACXX

value: CNL

value: AGTTCC


title: SEQC_LIF_LIV_B_1_L02_CGGGAGCCCG_FC1_23301020_20120502

value: CGGGAGCCCG


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98678_L_THI_NN_IP_CGATGT_s_2)

description: Training Set

value: liver

value: Sprague-Dawley

value: 5 d


title: SEQC_ILM_CNL_B_4_L04_AGTTCC_AD0FD7ACXX


title: SEQC_LIF_LIV_A_1_L01_AACATGATGA_FC1_23301020_20120502

value: AACATGATGA


title: SEQC_ILM_CNL_B_4_L02_AGTTCC_BD0FG1ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98658_L_BEZ_NU_OG_ACAGTG_s_8)

description: Training Set

value: PPARA

value: BEZAFIBRATE

value: 617 mg/kg

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 7 d


title: SEQC_LIF_PSU_D_5_L06_GGGTCGGTAT_FC2_23302023_20120308

value: D

value: AB 5500 Genetic Analyzer

value: PSU

value: GGGTCGGTAT


title: SEQC_LIF_LIV_A_1_L02_AACATGATGA_FC1_23301020_20120502

value: A

value: LIV


title: SEQC_ILM_CNL_B_4_L02_AGTTCC_AD0FD7ACXX

value: B

value: Illumina HiSeq 2000

value: CNL

value: AGTTCC


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98576_L_BEZ_NU_OG_ACAGTG_s_7)

description: Training Set

value: liver

value: Sprague-Dawley

value: LIVER

value: M

value: HiScan SQ


title: SEQC_LIF_PSU_D_5_L05_GGGTCGGTAT_FC1_23302023_20120308


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98573_L_THI_NN_IP_CGATGT_s_1)

description: Training Set

value: Cytotoxic

value: THIOACETAMIDE

value: 200 mg/kg

value: SALINE 100 %

value: INTRAPERITONEAL

value: 5 d


title: SEQC_LIF_PSU_D_5_L04_GGGTCGGTAT_FC2_23302023_20120308

value: D

value: AB 5500 Genetic Analyzer

value: PSU

value: GGGTCGGTAT


title: SEQC_ILM_CNL_B_4_L01_AGTTCC_BD0FG1ACXX

value: B

value: Illumina HiSeq 2000

value: CNL


title: SEQC_LIF_PSU_D_5_L04_GGGTCGGTAT_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_5_L03_GGGTCGGTAT_FC2_23302023_20120308


title: SEQC_LIF_PSU_D_5_L03_GGGTCGGTAT_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_5_L02_GGGTCGGTAT_FC2_23302023_20120308


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98455_L_PIR_NN_OG_GCCAAT_s_2)

description: Training Set

value: liver

value: Sprague-Dawley

value: PPARA

value: PIRINIXIC ACID

value: 364 mg/kg

value: CMC .5 %

value: ORAL GAVAGE


title: SEQC_LIF_PSU_D_5_L06_GGGTCGGTAT_FC1_23302023_20120308


title: SEQC_LIF_LIV_C_5_L03_GCGGTGCTTG_FC1_23301020_20120502

value: C

value: LIV

value: GCGGTGCTTG


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99837_L_CHL_NU_OG_CGATGT_s_4)

description: Training Set

value: Cytotoxic

value: CHLOROFORM

value: 600 mg/kg

value: CORN OIL 100 %

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: SEQC_LIF_PSU_D_5_L02_GGGTCGGTAT_FC1_23302023_20120308

value: D

value: AB 5500 Genetic Analyzer

value: PSU

value: GGGTCGGTAT


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98379_L_PIR_NN_OG_GCCAAT_s_4)

description: Training Set

value: liver

value: Sprague-Dawley

value: PPARA

value: PIRINIXIC ACID

value: 364 mg/kg

value: CMC .5 %


title: SEQC_LIF_PSU_D_5_L01_GGGTCGGTAT_FC2_23302023_20120308


title: SEQC_LIF_PSU_D_5_L05_GGGTCGGTAT_FC2_23302023_20120308


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_97998_L_PHE_NN_OG_ACAGTG_s_2)

description: Training Set

value: CAR/PXR

value: PHENOBARBITAL

value: 54 mg/kg

value: WATER 100 %

value: ORAL GAVAGE


title: SEQC_LIF_PSU_D_4_L06_GGGAGACGTT_FC2_23302023_20120308

value: GGGAGACGTT


title: SEQC_ILM_CNL_B_3_L08_TAGCTT_BD0FG1ACXX

value: B

value: Illumina HiSeq 2000

value: CNL

value: TAGCTT


title: SEQC_LIF_PSU_D_5_L01_GGGTCGGTAT_FC1_23302023_20120308

value: D

value: AB 5500 Genetic Analyzer

value: PSU

value: GGGTCGGTAT


title: SEQC_ILM_CNL_B_3_L07_TAGCTT_BD0FG1ACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_98518_L_PIR_NN_OG_GCCAAT_s_3)

description: Training Set

value: liver

value: Sprague-Dawley

value: PPARA

value: PIRINIXIC ACID

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: SEQC_ILM_NVS_F_2_L08_GTTTCG_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: F

value: NVS

value: GTTTCG


title: SEQC_ILM_CNL_B_3_L06_TAGCTT_BD0FG1ACXX

value: B

value: Illumina HiSeq 2000

value: CNL


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_97922_L_PHE_NN_OG_ACAGTG_s_1)

description: Training Set

value: CAR/PXR

value: PHENOBARBITAL

value: 54 mg/kg

value: WATER 100 %

value: ORAL GAVAGE


title: SEQC_LIF_PSU_D_4_L04_GGGAGACGTT_FC1_23302023_20120308

value: D

value: AB 5500 Genetic Analyzer

value: PSU

value: GGGAGACGTT


title: SEQC_ILM_CNL_B_3_L07_TAGCTT_AD0FD7ACXX

value: TAGCTT


title: SEQC_ILM_CNL_B_3_L05_TAGCTT_BD0FG1ACXX


title: SEQC_LIF_PSU_D_4_L06_GGGAGACGTT_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_3_L05_TAGCTT_AD0FD7ACXX


title: SEQC_ILM_NVS_F_2_L08_GTTTCG_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_4_L04_GGGAGACGTT_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_3_L04_TAGCTT_AD0FD7ACXX


title: SEQC_LIF_PSU_D_4_L03_GGGAGACGTT_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_5_L01_GAGTGG_AD0FD7ACXX

value: GAGTGG


title: SEQC_LIF_PSU_D_4_L02_GGGAGACGTT_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_3_L04_TAGCTT_BD0FG1ACXX


title: SEQC_ILM_NVS_F_2_L07_GTTTCG_AD0902ACXX

description: 92 poly-A tailed RNA sequences

value: F


title: SEQC_LIF_PSU_D_4_L02_GGGAGACGTT_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_4_L01_GGGAGACGTT_FC2_23302023_20120308


title: SEQC_ILM_NVS_F_2_L06_GTTTCG_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: NVS


title: SEQC_LIF_LIV_C_5_L01_GCGGTGCTTG_FC1_23301020_20120502

value: C

value: LIV

value: GCGGTGCTTG


title: SEQC_LIF_PSU_D_3_L06_AAGAGGAAAA_FC2_23302023_20120308

value: AAGAGGAAAA


title: SEQC_LIF_PSU_D_4_L01_GGGAGACGTT_FC1_23302023_20120308


title: SEQC_ILM_NVS_F_2_L07_GTTTCG_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: Illumina HiSeq 2000

value: GTTTCG


title: SEQC_ILM_CNL_B_3_L03_TAGCTT_BD0FG1ACXX

value: B

value: CNL


title: SEQC_LIF_PSU_D_3_L06_AAGAGGAAAA_FC1_23302023_20120308


title: SEQC_ILM_NVS_F_2_L06_GTTTCG_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_3_L05_AAGAGGAAAA_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_3_L02_TAGCTT_BD0FG1ACXX


title: SEQC_ILM_NVS_F_2_L05_GTTTCG_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_3_L05_AAGAGGAAAA_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_3_L04_AAGAGGAAAA_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_3_L03_TAGCTT_AD0FD7ACXX


title: SEQC_LIF_PSU_D_4_L05_GGGAGACGTT_FC1_23302023_20120308


title: SEQC_ILM_NVS_F_2_L04_GTTTCG_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_3_L03_AAGAGGAAAA_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_3_L01_TAGCTT_BD0FG1ACXX


title: SEQC_ILM_CNL_B_3_L02_TAGCTT_AD0FD7ACXX


title: SEQC_LIF_PSU_D_3_L04_AAGAGGAAAA_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_3_L02_AAGAGGAAAA_FC2_23302023_20120308


title: SEQC_ILM_NVS_F_2_L04_GTTTCG_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_3_L02_AAGAGGAAAA_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_3_L01_TAGCTT_AD0FD7ACXX


title: SEQC_ILM_NVS_F_2_L05_GTTTCG_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_NVS_F_2_L03_GTTTCG_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_2_L06_GAGCGAGGAT_FC2_23302023_20120308

value: GAGCGAGGAT


title: SEQC_ILM_CNL_B_2_L08_GCCAAT_BD0FG1ACXX

value: GCCAAT


title: SEQC_LIF_PSU_D_3_L03_AAGAGGAAAA_FC2_23302023_20120308

value: D

value: AB 5500 Genetic Analyzer


title: SEQC_LIF_PSU_D_3_L01_AAGAGGAAAA_FC1_23302023_20120308

value: PSU


title: SEQC_ILM_NVS_F_2_L03_GTTTCG_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_5_L03_GAGTGG_BD0FG1ACXX


title: SEQC_LIF_LIV_C_1_L04_CAGCAAACTT_FC1_23301020_20120502

value: CAGCAAACTT


title: SEQC_LIF_PSU_D_2_L05_GAGCGAGGAT_FC2_23302023_20120308


title: SEQC_ILM_NVS_F_2_L02_GTTTCG_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_2_L05_GAGCGAGGAT_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_2_L04_GAGCGAGGAT_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_2_L07_GCCAAT_BD0FG1ACXX


title: SEQC_ILM_NVS_F_2_L01_GTTTCG_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_3_L01_AAGAGGAAAA_FC2_23302023_20120308


title: SEQC_LIF_PSU_D_2_L02_GAGCGAGGAT_FC2_23302023_20120308


title: SEQC_ILM_NVS_F_2_L02_GTTTCG_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_2_L04_GAGCGAGGAT_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_2_L07_GCCAAT_AD0FD7ACXX


title: SEQC_LIF_PSU_D_2_L03_GAGCGAGGAT_FC2_23302023_20120308


title: In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_99328_L_AFL_NN_OG_ATCACG_s_7)

description: Training Set

value: liver

value: Sprague-Dawley

value: DNA Damage

value: AFLATOXIN B1

value: 0.3 mg/kg

value: CMC .5 %

value: ORAL GAVAGE

value: 5 d

value: LIVER

value: M

value: HiScan SQ


title: SEQC_LIF_PSU_D_2_L03_GAGCGAGGAT_FC1_23302023_20120308

value: GAGCGAGGAT


title: SEQC_LIF_PSU_D_2_L02_GAGCGAGGAT_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_2_L06_GCCAAT_BD0FG1ACXX

value: B

value: Illumina HiSeq 2000

value: CNL

value: GCCAAT


title: SEQC_ILM_NVS_F_2_L01_GTTTCG_AD0902ACXX

description: 92 poly-A tailed RNA sequences

value: F

value: NVS

value: GTTTCG


title: SEQC_LIF_PSU_D_2_L06_GAGCGAGGAT_FC1_23302023_20120308

value: D

value: AB 5500 Genetic Analyzer

value: PSU


title: SEQC_LIF_PSU_D_2_L01_GAGCGAGGAT_FC2_23302023_20120308


title: SEQC_ILM_NVS_F_1_L08_GTGAAA_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: GTGAAA


title: SEQC_LIF_PSU_D_2_L01_GAGCGAGGAT_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_2_L08_GCCAAT_AD0FD7ACXX


title: SEQC_ILM_CNL_B_2_L05_GCCAAT_AD0FD7ACXX


title: SEQC_LIF_PSU_D_1_L06_GGATGCGGTC_FC2_23302023_20120308

value: GGATGCGGTC


title: SEQC_LIF_PSU_D_1_L06_GGATGCGGTC_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_1_L05_GGATGCGGTC_FC2_23302023_20120308


title: SEQC_LIF_PSU_D_1_L05_GGATGCGGTC_FC1_23302023_20120308


title: SEQC_ILM_NVS_F_1_L08_GTGAAA_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_2_L04_GCCAAT_BD0FG1ACXX


title: SEQC_ILM_CNL_B_4_L01_AGTTCC_AD0FD7ACXX

value: AGTTCC


title: SEQC_ILM_NVS_F_1_L07_GTGAAA_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_2_L04_GCCAAT_AD0FD7ACXX


title: SEQC_LIF_PSU_D_1_L04_GGATGCGGTC_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_2_L03_GCCAAT_BD0FG1ACXX


title: SEQC_LIF_PSU_D_1_L04_GGATGCGGTC_FC2_23302023_20120308


title: SEQC_ILM_NVS_F_1_L07_GTGAAA_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_2_L03_GCCAAT_AD0FD7ACXX


title: SEQC_LIF_PSU_D_1_L02_GGATGCGGTC_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_3_L08_TAGCTT_AD0FD7ACXX

value: TAGCTT


title: SEQC_ILM_NVS_F_1_L06_GTGAAA_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_1_L01_GGATGCGGTC_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_2_L02_GCCAAT_BD0FG1ACXX


title: SEQC_ILM_NVS_F_1_L05_GTGAAA_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_1_L01_GGATGCGGTC_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_5_L06_GCGGTGCTTG_FC2_23302023_20120308

value: C

value: GCGGTGCTTG


title: SEQC_ILM_NVS_F_1_L05_GTGAAA_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_5_L05_GCGGTGCTTG_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_2_L02_GCCAAT_AD0FD7ACXX


title: SEQC_ILM_CNL_B_2_L01_GCCAAT_BD0FG1ACXX


title: SEQC_LIF_PSU_C_5_L05_GCGGTGCTTG_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_2_L01_GCCAAT_AD0FD7ACXX


title: SEQC_LIF_PSU_C_5_L04_GCGGTGCTTG_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_2_L05_GCCAAT_BD0FG1ACXX


title: SEQC_ILM_NVS_F_1_L06_GTGAAA_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_NVS_F_1_L04_GTGAAA_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_5_L03_GCGGTGCTTG_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_5_L04_GCGGTGCTTG_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_1_L08_CGATGT_BD0FG1ACXX

value: CGATGT


title: SEQC_LIF_PSU_D_1_L02_GGATGCGGTC_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_1_L08_CGATGT_AD0FD7ACXX

value: B


title: SEQC_ILM_NVS_F_1_L03_GTGAAA_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: Illumina HiSeq 2000


title: SEQC_ILM_NVS_F_1_L03_GTGAAA_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_1_L07_CGATGT_BD0FG1ACXX

value: CNL


title: SEQC_LIF_PSU_C_5_L01_GCGGTGCTTG_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_5_L02_GCGGTGCTTG_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_5_L02_GCGGTGCTTG_FC2_23302023_20120308


title: SEQC_ILM_NVS_F_1_L02_GTGAAA_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_5_L01_GCGGTGCTTG_FC2_23302023_20120308


title: SEQC_LIF_PSU_C_5_L06_GCGGTGCTTG_FC1_23302023_20120308


title: SEQC_ILM_NVS_F_1_L04_GTGAAA_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_4_L06_GAGTTGAATG_FC2_23302023_20120308

value: GAGTTGAATG


title: SEQC_LIF_PSU_C_4_L06_GAGTTGAATG_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_4_L05_GAGTTGAATG_FC2_23302023_20120308


title: SEQC_ILM_NVS_F_1_L02_GTGAAA_AD0902ACXX

description: 92 poly-A tailed RNA sequences

value: F


title: SEQC_ILM_CNL_B_1_L07_CGATGT_AD0FD7ACXX


title: SEQC_LIF_PSU_C_5_L03_GCGGTGCTTG_FC2_23302023_20120308


title: SEQC_LIF_PSU_C_4_L04_GAGTTGAATG_FC2_23302023_20120308


title: SEQC_LIF_PSU_C_4_L05_GAGTTGAATG_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_1_L06_CGATGT_BD0FG1ACXX


title: SEQC_ILM_CNL_B_1_L05_CGATGT_BD0FG1ACXX


title: SEQC_LIF_PSU_C_4_L04_GAGTTGAATG_FC1_23302023_20120308


title: SEQC_ILM_NVS_F_1_L01_GTGAAA_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: NVS


title: SEQC_ILM_NVS_F_1_L01_GTGAAA_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_1_L05_CGATGT_AD0FD7ACXX


title: SEQC_LIF_PSU_C_4_L03_GAGTTGAATG_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_4_L03_GAGTTGAATG_FC2_23302023_20120308


title: SEQC_ILM_NVS_E_2_L08_GTGGCC_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: E

value: GTGGCC


title: SEQC_LIF_PSU_C_4_L02_GAGTTGAATG_FC2_23302023_20120308

value: AB 5500 Genetic Analyzer


title: SEQC_ILM_CNL_B_1_L04_CGATGT_BD0FG1ACXX


title: SEQC_LIF_PSU_C_4_L02_GAGTTGAATG_FC1_23302023_20120308

value: PSU


title: SEQC_LIF_PSU_C_4_L01_GAGTTGAATG_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_4_L01_GAGTTGAATG_FC2_23302023_20120308


title: SEQC_ILM_NVS_E_2_L08_GTGGCC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_1_L04_CGATGT_AD0FD7ACXX


title: SEQC_ILM_NVS_E_2_L07_GTGGCC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_3_L06_GTGCGACACG_FC2_23302023_20120308

value: GTGCGACACG


title: SEQC_ILM_CNL_B_1_L03_CGATGT_BD0FG1ACXX


title: SEQC_LIF_PSU_C_3_L06_GTGCGACACG_FC1_23302023_20120308


title: SEQC_ILM_NVS_E_2_L07_GTGGCC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_3_L05_GTGCGACACG_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_3_L05_GTGCGACACG_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_1_L03_CGATGT_AD0FD7ACXX


title: SEQC_ILM_NVS_E_2_L06_GTGGCC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_3_L03_GTGCGACACG_FC2_23302023_20120308


title: SEQC_ILM_CNL_B_1_L02_CGATGT_BD0FG1ACXX


title: SEQC_LIF_PSU_C_3_L04_GTGCGACACG_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_1_L02_CGATGT_AD0FD7ACXX


title: SEQC_ILM_NVS_E_2_L05_GTGGCC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_3_L02_GTGCGACACG_FC2_23302023_20120308


title: SEQC_LIF_PSU_C_3_L03_GTGCGACACG_FC1_23302023_20120308


title: SEQC_ILM_CNL_B_1_L01_CGATGT_BD0FG1ACXX


title: SEQC_LIF_PSU_C_3_L02_GTGCGACACG_FC1_23302023_20120308


title: SEQC_ILM_NVS_E_2_L05_GTGGCC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_3_L01_GTGCGACACG_FC2_23302023_20120308


title: SEQC_ILM_NVS_E_2_L04_GTGGCC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_B_1_L01_CGATGT_AD0FD7ACXX


title: SEQC_LIF_PSU_C_2_L06_GGGTTATGCC_FC2_23302023_20120308

value: GGGTTATGCC


title: SEQC_LIF_PSU_C_3_L01_GTGCGACACG_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_5_L08_CGTACG_BD0FG1ACXX

value: A

value: CGTACG


title: SEQC_ILM_NVS_E_2_L04_GTGGCC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_2_L06_GGGTTATGCC_FC1_23302023_20120308

value: C


title: SEQC_LIF_PSU_C_2_L05_GGGTTATGCC_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_5_L08_CGTACG_AD0FD7ACXX


title: SEQC_LIF_PSU_C_2_L05_GGGTTATGCC_FC1_23302023_20120308


title: SEQC_ILM_NVS_E_2_L06_GTGGCC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_2_L04_GGGTTATGCC_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_2_L04_GGGTTATGCC_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_5_L07_CGTACG_BD0FG1ACXX


title: SEQC_ILM_NVS_E_2_L03_GTGGCC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_D_4_L05_GGGAGACGTT_FC2_23302023_20120308

value: D

value: GGGAGACGTT


title: SEQC_LIF_PSU_C_2_L03_GGGTTATGCC_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_5_L07_CGTACG_AD0FD7ACXX


title: SEQC_LIF_PSU_C_2_L03_GGGTTATGCC_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_2_L02_GGGTTATGCC_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_5_L06_CGTACG_BD0FG1ACXX


title: SEQC_LIF_PSU_C_3_L04_GTGCGACACG_FC2_23302023_20120308


title: SEQC_ILM_NVS_E_2_L02_GTGGCC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_NVS_E_2_L02_GTGGCC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_2_L01_GGGTTATGCC_FC2_23302023_20120308


title: SEQC_LIF_PSU_C_1_L06_ATAGGTTATA_FC2_23302023_20120308

value: ATAGGTTATA


title: SEQC_ILM_CNL_A_5_L05_CGTACG_AD0FD7ACXX

value: Illumina HiSeq 2000


title: SEQC_ILM_NVS_E_2_L01_GTGGCC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_NVS_E_2_L03_GTGGCC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_1_L05_ATAGGTTATA_FC2_23302023_20120308


title: SEQC_ILM_NVS_E_2_L01_GTGGCC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_C_1_L05_ATAGGTTATA_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_5_L04_CGTACG_BD0FG1ACXX

value: CNL


title: SEQC_LIF_PSU_C_2_L01_GGGTTATGCC_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_1_L03_GGATGCGGTC_FC2_23302023_20120308

value: GGATGCGGTC


title: SEQC_ILM_NVS_E_1_L08_GTCCGC_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: GTCCGC


title: SEQC_ILM_CNL_A_5_L04_CGTACG_AD0FD7ACXX


title: SEQC_LIF_PSU_C_1_L04_ATAGGTTATA_FC2_23302023_20120308


title: SEQC_LIF_PSU_C_2_L02_GGGTTATGCC_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_1_L04_ATAGGTTATA_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_1_L03_GGATGCGGTC_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_1_L03_ATAGGTTATA_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_5_L03_CGTACG_BD0FG1ACXX


title: SEQC_LIF_PSU_C_1_L03_ATAGGTTATA_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_5_L03_CGTACG_AD0FD7ACXX


title: SEQC_ILM_CNL_A_5_L05_CGTACG_BD0FG1ACXX


title: SEQC_LIF_PSU_C_1_L02_ATAGGTTATA_FC2_23302023_20120308


title: SEQC_LIF_PSU_C_1_L02_ATAGGTTATA_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_1_L01_ATAGGTTATA_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_5_L02_CGTACG_BD0FG1ACXX


title: SEQC_LIF_PSU_C_1_L06_ATAGGTTATA_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_5_L06_GAGAAGATGA_FC2_23302023_20120308

value: B

value: GAGAAGATGA


title: SEQC_ILM_NVS_E_1_L06_GTCCGC_BD08PVACXX

description: 92 poly-A tailed RNA sequences

value: E

value: NVS


title: SEQC_ILM_CNL_A_5_L02_CGTACG_AD0FD7ACXX


title: SEQC_LIF_PSU_B_5_L06_GAGAAGATGA_FC1_23302023_20120308

value: AB 5500 Genetic Analyzer

value: PSU


title: SEQC_LIF_PSU_B_5_L05_GAGAAGATGA_FC2_23302023_20120308


title: SEQC_ILM_NVS_E_1_L06_GTCCGC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_NVS_E_1_L08_GTCCGC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_NVS_E_1_L05_GTCCGC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_NVS_E_1_L07_GTCCGC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_5_L04_GAGAAGATGA_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_5_L04_GAGAAGATGA_FC1_23302023_20120308


title: SEQC_ILM_NVS_E_1_L05_GTCCGC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_5_L03_GAGAAGATGA_FC2_23302023_20120308


title: SEQC_ILM_NVS_E_1_L04_GTCCGC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_4_L08_AGTCAA_BD0FG1ACXX

value: AGTCAA


title: SEQC_LIF_PSU_B_5_L02_GAGAAGATGA_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_5_L03_GAGAAGATGA_FC1_23302023_20120308


title: SEQC_ILM_NVS_E_1_L07_GTCCGC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_4_L08_AGTCAA_AD0FD7ACXX

value: A


title: SEQC_LIF_PSU_B_5_L02_GAGAAGATGA_FC1_23302023_20120308


title: SEQC_LIF_PSU_C_1_L01_ATAGGTTATA_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_5_L01_GAGAAGATGA_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_4_L07_AGTCAA_BD0FG1ACXX


title: SEQC_ILM_NVS_E_1_L04_GTCCGC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_5_L01_GAGAAGATGA_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_4_L06_GTGCGGCAGA_FC2_23302023_20120308

value: GTGCGGCAGA


title: SEQC_ILM_CNL_A_4_L07_AGTCAA_AD0FD7ACXX


title: SEQC_ILM_NVS_E_1_L03_GTCCGC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_5_L01_CGTACG_BD0FG1ACXX

value: CGTACG


title: SEQC_LIF_PSU_B_4_L06_GTGCGGCAGA_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_4_L05_GTGCGGCAGA_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_5_L05_GAGAAGATGA_FC1_23302023_20120308


title: SEQC_ILM_NVS_E_1_L03_GTCCGC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_5_L01_CGTACG_AD0FD7ACXX


title: SEQC_ILM_CNL_A_4_L06_AGTCAA_BD0FG1ACXX


title: SEQC_LIF_PSU_B_4_L05_GTGCGGCAGA_FC1_23302023_20120308


title: SEQC_ILM_NVS_E_1_L02_GTCCGC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_NVS_E_1_L02_GTCCGC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_4_L04_GTGCGGCAGA_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_4_L03_GTGCGGCAGA_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_4_L03_GTGCGGCAGA_FC1_23302023_20120308


title: SEQC_ILM_NVS_E_1_L01_GTCCGC_BD08PVACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_4_L02_GTGCGGCAGA_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_4_L01_GTGCGGCAGA_FC2_23302023_20120308


title: SEQC_ILM_NVS_E_1_L01_GTCCGC_AD0902ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_4_L04_AGTCAA_AD0FD7ACXX


title: SEQC_ILM_CNL_A_4_L04_AGTCAA_BD0FG1ACXX


title: SEQC_LIF_PSU_B_4_L01_GTGCGGCAGA_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_3_L06_GCGGTAAGCT_FC2_23302023_20120308

value: GCGGTAAGCT


title: SEQC_ILM_MAY_F_2_L08_GTTTCG_BD0E99ACXX

description: 92 poly-A tailed RNA sequences

value: F

value: MAY

value: GTTTCG


title: SEQC_ILM_CNL_A_4_L03_AGTCAA_BD0FG1ACXX

value: Illumina HiSeq 2000

value: CNL


title: SEQC_LIF_PSU_B_3_L05_GCGGTAAGCT_FC2_23302023_20120308


title: SEQC_ILM_MAY_F_2_L08_GTTTCG_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_4_L03_AGTCAA_AD0FD7ACXX


title: SEQC_LIF_PSU_B_3_L06_GCGGTAAGCT_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_2_L07_GTTTCG_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_3_L04_GCGGTAAGCT_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_3_L05_GCGGTAAGCT_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_4_L02_AGTCAA_BD0FG1ACXX


title: SEQC_LIF_PSU_B_4_L04_GTGCGGCAGA_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_3_L04_GCGGTAAGCT_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_2_L07_GTTTCG_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_3_L03_GCGGTAAGCT_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_4_L05_AGTCAA_AD0FD7ACXX


title: SEQC_ILM_CNL_A_4_L02_AGTCAA_AD0FD7ACXX


title: SEQC_LIF_PSU_B_3_L03_GCGGTAAGCT_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_2_L06_GTTTCG_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_4_L02_GTGCGGCAGA_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_4_L01_AGTCAA_BD0FG1ACXX


title: SEQC_LIF_PSU_B_3_L02_GCGGTAAGCT_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_3_L02_GCGGTAAGCT_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_3_L01_GCGGTAAGCT_FC2_23302023_20120308


title: SEQC_ILM_MAY_F_2_L06_GTTTCG_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_F_2_L05_GTTTCG_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_4_L05_AGTCAA_BD0FG1ACXX


title: SEQC_LIF_PSU_B_3_L01_GCGGTAAGCT_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_2_L06_GCGAGGGACA_FC2_23302023_20120308

value: GCGAGGGACA


title: SEQC_ILM_CNL_A_3_L08_GATCAG_BD0FG1ACXX

value: GATCAG


title: SEQC_LIF_PSU_B_2_L06_GCGAGGGACA_FC1_23302023_20120308

value: B


title: SEQC_ILM_MAY_F_2_L04_GTTTCG_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_3_L08_GATCAG_AD0FD7ACXX


title: SEQC_LIF_PSU_B_2_L04_GCGAGGGACA_FC2_23302023_20120308


title: SEQC_ILM_MAY_F_2_L05_GTTTCG_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_2_L04_GCGAGGGACA_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_2_L05_GCGAGGGACA_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_2_L04_GTTTCG_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_2_L03_GCGAGGGACA_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_3_L07_GATCAG_AD0FD7ACXX


title: SEQC_LIF_PSU_B_2_L05_GCGAGGGACA_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_2_L03_GCGAGGGACA_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_2_L02_GCGAGGGACA_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_3_L06_GATCAG_BD0FG1ACXX


title: SEQC_ILM_CNL_A_3_L07_GATCAG_BD0FG1ACXX


title: SEQC_LIF_PSU_B_2_L01_GCGAGGGACA_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_4_L01_AGTCAA_AD0FD7ACXX


title: SEQC_LIF_PSU_B_2_L02_GCGAGGGACA_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_2_L03_GTTTCG_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_F_2_L03_GTTTCG_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_1_L06_AGGGAGTGGT_FC2_23302023_20120308

value: AGGGAGTGGT


title: SEQC_LIF_PSU_B_1_L06_AGGGAGTGGT_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_2_L02_GTTTCG_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_F_2_L02_GTTTCG_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_1_L05_AGGGAGTGGT_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_3_L04_GATCAG_BD0FG1ACXX


title: SEQC_LIF_PSU_B_1_L05_AGGGAGTGGT_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_2_L01_GTTTCG_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_F_2_L01_GTTTCG_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_F_1_L08_GTGAAA_BD0E99ACXX

description: 92 poly-A tailed RNA sequences

value: GTGAAA


title: SEQC_ILM_CNL_A_3_L03_GATCAG_BD0FG1ACXX


title: SEQC_LIF_PSU_B_1_L03_AGGGAGTGGT_FC2_23302023_20120308

value: AB 5500 Genetic Analyzer


title: SEQC_ILM_CNL_A_3_L03_GATCAG_AD0FD7ACXX


title: SEQC_LIF_PSU_B_1_L04_AGGGAGTGGT_FC2_23302023_20120308

value: PSU


title: SEQC_LIF_PSU_B_1_L04_AGGGAGTGGT_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_1_L02_AGGGAGTGGT_FC2_23302023_20120308


title: SEQC_LIF_PSU_B_1_L03_AGGGAGTGGT_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_2_L01_GCGAGGGACA_FC1_23302023_20120308


title: SEQC_LIF_PSU_B_1_L01_AGGGAGTGGT_FC2_23302023_20120308


title: SEQC_ILM_MAY_F_1_L08_GTGAAA_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_B_1_L02_AGGGAGTGGT_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_3_L05_GATCAG_BD0FG1ACXX


title: SEQC_ILM_MAY_F_1_L07_GTGAAA_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_3_L02_GATCAG_AD0FD7ACXX


title: SEQC_ILM_CNL_A_3_L05_GATCAG_AD0FD7ACXX


title: SEQC_LIF_PSU_B_1_L01_AGGGAGTGGT_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_5_L06_GTGCGGTTCC_FC1_23302023_20120308

value: GTGCGGTTCC


title: SEQC_ILM_MAY_F_1_L07_GTGAAA_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_5_L06_GTGCGGTTCC_FC2_23302023_20120308

value: A


title: SEQC_LIF_PSU_A_5_L05_GTGCGGTTCC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_5_L05_GTGCGGTTCC_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_3_L01_GATCAG_BD0FG1ACXX


title: SEQC_ILM_MAY_F_1_L06_GTGAAA_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_3_L04_GATCAG_AD0FD7ACXX


title: SEQC_ILM_CNL_A_3_L01_GATCAG_AD0FD7ACXX


title: SEQC_LIF_PSU_A_5_L04_GTGCGGTTCC_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_1_L06_GTGAAA_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_2_L08_ACAGTG_BD0FG1ACXX

value: ACAGTG


title: SEQC_LIF_PSU_A_5_L03_GTGCGGTTCC_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_5_L03_GTGCGGTTCC_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_3_L02_GATCAG_BD0FG1ACXX


title: SEQC_LIF_PSU_A_5_L02_GTGCGGTTCC_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_1_L04_GTGAAA_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_5_L02_GTGCGGTTCC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_5_L01_GTGCGGTTCC_FC2_23302023_20120308


title: SEQC_ILM_MAY_F_1_L05_GTGAAA_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_F_1_L05_GTGAAA_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_F_1_L04_GTGAAA_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_2_L07_ACAGTG_BD0FG1ACXX


title: SEQC_LIF_PSU_A_4_L06_GCGGTAAGGC_FC2_23302023_20120308

value: GCGGTAAGGC


title: SEQC_ILM_CNL_A_2_L08_ACAGTG_AD0FD7ACXX


title: SEQC_ILM_CNL_A_2_L06_ACAGTG_BD0FG1ACXX


title: SEQC_ILM_CNL_A_2_L07_ACAGTG_AD0FD7ACXX


title: SEQC_LIF_PSU_A_4_L05_GCGGTAAGGC_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_4_L05_GCGGTAAGGC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_5_L04_GTGCGGTTCC_FC2_23302023_20120308


title: SEQC_ILM_MAY_F_1_L03_GTGAAA_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_4_L04_GCGGTAAGGC_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_4_L06_GCGGTAAGGC_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_1_L03_GTGAAA_AD0E8UACXX

description: 92 poly-A tailed RNA sequences