title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0577), replicate 1

description:
Forward (i5) barcode: GAGTCAGT, reverse (i7) barcode: AGGACAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Csnk2a2 knockdown (T0578), replicate 1

status: Public on Feb 02 2017

type: SRA

city: Toronto

first: Ulrich

last: Braunschweig

state: Ontario

address: 160 College Street

department: Donnelly Centre

country: Canada

institute: University of Toronto

description:
Forward (i5) barcode: GAGTCAGT, reverse (i7) barcode: CAACTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab

library_source: transcriptomic

data_processing:
CASAVA 1.8 was used for base calling.
Fastq files contain demultiplexed reads which were assigned to the appropriate treatment by matching to expected forward and reverse barcodes (sequenced in dedicated reads; not supplied).
Forward and reverse event reads were mapped to custom junction libraries representing all expected splice variants (supplied as processed files), using bowtie with settings --best -v 3 -k 1 --trim3 26 --trim5 20. Trimming was done to remove lower-quality, uninformative ends and because forward reads had a missing base call at position 11 due to a power outage. Junction libraries were first constructed from NCBIm37/mm9 gene annotations, and then refined based on the results of de novo mapping of the reads from one full Illumina lane from each cell line using tophat (default settings with -i 40 and providing Ensembl transcript annotations for NCBIm37), after quality trimming (minimum MAPQ of 33) from the 3'-end with the fastx toolkit. Mapped reads were counted per junction.
Alternative splicing analysis: Percent-spliced-in (PSI) values were calculated for each alternative exon, or part thereof in the case of alternative 5'-/3'-splice sites ('event'), from read tallies as follows: PSI was calculated independently from forward and reverse reads as the percentage of reads supporting inclusion divided by the total number of reads for the event. For alternative 5'/3'-ss events that were part of an alternative exon (Foxm1.A2, Mta1.A1, Uspl1.A3), the PSI was instead calculated with reference to the total reads supporting inclusion of that exon in order to assess independent regulation of alternative splice site usage. Only the read direction in which all reads unambiguously supported either inclusion or exclusion of an event was used, and the average if that applied for both. Exploratory analysis revealed that PSI values showed low-level batch effects per 96-well plate which we moderated by subtracting a weighted plate median in which negative controls (siNT and mock treatment) were given 20x more weight than other samples. To derive variances, and because PSI values are not nearly normally distributed but roughly follow a beta distribution, we elected to fit a beta distribution to each pair of replicate treatments, as well as to all negative controls from both replicates, using maximum-likelihood fitting as implemented in the fitdistr() function from the R package MASS {Venables & Ripley, Modern Applied Statistics with S (2002)}. Iterative optimization of shape parameters was initiated with settings x=PSI, shape1=1, shape2=1, method=”L-BFGS-B”, lower=0.01, and upper=mean number of reads supporting each PSI value. A modified Strictly Standardized Mean Difference (SSMD {Zhang, Genomics (2007)}) was then calculated based on the formula: SSMD = (μt – μc)/SQRT(vart + varc) where μt and μc are the means (corresponding to the PSI), and vart and varc the variances of the beta distributions fitted to the treatment replicates and negative controls, respectively. Events for which not all reads from at least one direction were informative (Mff.A2, Tead1.A2) were excluded from further analysis, as were events in individual treatments with less than 20 reads in one or both replicates (~9% of all event x treatment combinations). Additionally, the following events were removed from further splicing analysis: expression only events or constitutive exons, Fgf4, Gapdh, Srpk2, Srrm4; events with consistently low read counts: Atg13.A1, H2afy.A2, Tcf7l1 (N2A only), Dnmt3b (N2A only); or because measured inclusion was biased by differential length of isoforms:, Fgfr1, Sall4.
Expression analysis: Read counts from all splice variants of each gene were used to estimate relative mRNA expression levels, reads per million reads (RPMs). Differential expression analysis based on raw read counts was performed using the generalized linear models workflow from the R package edgeR. Plate, position (edge/interior) and treatment were used as design factors (where all treatments of each type of control were treated as replicates.) Models fitted using estimateDisp() to estimate the common, trended, and tag-wise dispersion for the CGR8 and N2A data separately. Subsequently, differences attributable to treatment, plate, or position contrasts were extracted with glmLRT() and represented as log2-fold changes with associated FDR. Fold-changes for treatments are relative to the siNT and mock-treatment controls.
Genome_build: NCBIm37/mm9
Supplementary_files_format_and_content: Processed files are either tab-delimited  tables (.tab) or FASTA files (.fa). KnockdownAnnotation.tab contains treatment annotations and well/plate positions. ScreenJuncUp.20-77.tab and ScreenJuncDn.20-77.tab contain the custom junction upstream and downstram junction libraries, respectively, and ScreenEvent_junctions.tab contains the information which junctions were used to calculate PSI for each event. PSI.SSMD.CGR8.tab and PSI.SSMD.N2A.tab contain raw PSI of each replicate and final SSMD. Reads_perEvent_CGR8.tab and Reads_perEvent_N2A.tab contain raw read counts on which expression analyis was based, and Expression.CGR8.treatments.tab and Expression.N2A.treatments.tab contain modeled relative abundance and fold-change with associated FDR for each treatment type.

molecule: total RNA

organism: Mus musculus

source_name: Embryonic stem cells

growth_protocol: CGR8 mouse embryonic stem cells (ESCs) were cultured as described previously on gelatin-coated plates (Gabut et al., Cell (2011), Han  et al., Nature (2013)). Mouse neuroblastoma (N2A) cells were grown in DMEM supplemented with 10% FBS, sodium pyruvate, MEM non-essential amino acids, and penicillin/streptomycin. All cell lines were maintained at 37°C with 5% CO2.

extract_protocol:
Forty-eight hours post-transfection, total RNA were purified from cultured cells using RNeasy Plus 96 Kit (Qiagen), as per the manufacturer’s instructions.
For each sample, a multiplex RT-PCR assay was first applied to simultaneously amplify 50 AS and/or expression events in a single reaction. The multiplex RT-PCR reaction was carried out in 96-well plates using the OneStep RT-PCR kit (Qiagen) as recommended by the manufacturer, with the following changes: reactions were performed in a volume of 20 uL with 2 uL of the purified total RNA as input, and a mixture of 50 pairs of primers was added to each reaction with a final concentration of 0.25 uM for each individual forward and reverse primer. Four identical Veriti 96-well Thermal Cyclers (Applied Biosystems) were used with the following conditions: 50°C for 30 minutes, 95°C for 15 minute, 30 cycles of 94°C for 40 seconds, 58°C for 1 minute (slow ramp rate), 72°C for 3 minutes, and a final extension step at 72°C for 10 minutes. Two sets of barcodes were incorporated into forward and reverse primers, respectively, after the universal adaptors and added to the amplicons in the second PCR reaction to allow demultiplexing all reads that were derived from a particular treatment. Primers sequences were: forward primer, AATGATACGGCGACCACCGAGATCTACACNNNNNNNNACACTCTTTCCCTACACGACGCTCTTCCGATCT (N denotes i5 barcode); reverse primer, CAAGCAGAAGACGGCATACGAGATNNNNNNNNGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT (N denotes i7 primer). The second PCR was performed using Phusion High-Fidelity DNA Polymerase (Thermo Scientific), as per the manufacturer’s instructions. For each 20 uL of reaction, 1 uL of the multiplex RT-PCR reaction products was used as templates. The thermal cycling conditions were as follows: 98°C for 30 seconds, 15 cycles of 98°C for 10 seconds, 65°C for 30 seconds, 72°C for 30 seconds, and a final extension step at 72°C for 5 minutes. The resulting libraries were pooled and sequenced.

treatment_protocol: Twenty-four hours prior to transfection, CGR8 and N2A cells were seeded in 96-well plates, 3000 and 5000 cells per well, respectively. Cells were transfected with the SMARTpool siRNAs at 50 nM final concentration using DharmaFECT1 reagent (Dharmacon), as recommended by the manufacturer.

tag: cell line


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Taf15 knockdown (T0570), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TCAGCTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tiparp knockdown (T0571), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GTACCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sox9 knockdown (T0568), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: AGGATCGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tdrd7 knockdown (T0569), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CTAGGTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tnpo1 knockdown (T0580), replicate 1

description:
Forward (i5) barcode: GAGTCAGT, reverse (i7) barcode: GTACTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zbtb7b knockdown (T0585), replicate 1

description:
Forward (i5) barcode: GAGTCAGT, reverse (i7) barcode: ACCTTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Synj2 knockdown (T0562), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TAGCATCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smyd2 knockdown (T0564), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CAGAGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tia1 knockdown (T0559), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: ACCTTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Srf knockdown (T0558), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GTCTCTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tfpt knockdown (T0556), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CCTTAACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tbl1x knockdown (T0552), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GAACAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smn1 knockdown (T0555), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: ATTACCGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tax1bp1 knockdown (T0548), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CTCTTGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Supt6h knockdown (T0554), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CGGCATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ssrp1 knockdown (T0567), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: AAGGATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tial1 knockdown (T0544), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GAGTAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Setd7 knockdown (T0545), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: ATGCTACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Suv39h1 knockdown (T0543), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: AGAGTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Terf2 knockdown (T0550), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TGCTTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcf3 knockdown (T0563), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CCGGATTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smc4 knockdown (T0566), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GTGTTCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Top2a knockdown (T0561), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TGAGACAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sept2 knockdown (T0560), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TCGATGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tef knockdown (T0542), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TAGCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sox4 knockdown (T0546), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GGCCTAAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Srrm2 knockdown (T0540), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GCAACGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tbx3 knockdown (T0541), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GCTATACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Snrpn knockdown (T0551), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TACGCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Syn1 knockdown (T0557), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CGCGTATA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tinf2 knockdown (T0565), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CGTTCCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarcd2 knockdown (T0553), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TGTCCTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarcc1 knockdown (T0536), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CGATAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0537), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GCTTCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Top3a knockdown (T0539), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: AGGAGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Syncrip knockdown (T0535), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CCAATAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcf12 knockdown (T0547), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GATGCATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sox2 knockdown (T0534), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TGAGCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prmt5 knockdown (T0531), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CTTGCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Top2b knockdown (T0532), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: AACGCCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sox8 knockdown (T0530), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: GTGACTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sp2 knockdown (T0529), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CGTAGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcerg1 knockdown (T0528), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TTGCCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tlr5 knockdown (T0523), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CAAGACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Terf2ip knockdown (T0524), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GTGTGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0525), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: ACGTCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarcd1 knockdown (T0572), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: ATCCATGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tarbp2 knockdown (T0526), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CCAATTCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tfam knockdown (T0527), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CAAGGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tbx2 knockdown (T0522), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CTTGAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Set knockdown (T0521), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: AACGGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sos1 knockdown (T0538), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: TGCAGTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Stat6 knockdown (T0520), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GTTGGTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcp1 knockdown (T0518), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: AGAGGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Supt5h knockdown (T0516), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CTTCGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tada3 knockdown (T0549), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: ACACCAGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Timeless knockdown (T0517), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GAGACTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcf4 knockdown (T0515), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GACTTCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0507), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TCGTTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sp3 knockdown (T0509), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: AGGTCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Taf12 knockdown (T0514), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CCATAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarcal1 knockdown (T0510), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CAGACAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sox15 knockdown (T0511), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: ACACCTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sip1 knockdown (T0513), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GATGCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tfdp1 knockdown (T0512), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TACCTAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Slc6a8 knockdown (T0533), replicate 1

description:
Forward (i5) barcode: CTGCTTCG, reverse (i7) barcode: CTTCAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Top3b knockdown (T0505), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CTGTTCTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcf7l1 knockdown (T0504), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GGCGTATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tada2a knockdown (T0496), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CTGTCTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Top1 knockdown (T0495), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GTCAAGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Suv39h2 knockdown (T0503), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: AAGGAACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tceb3 knockdown (T0497), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TGCAACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sirt2 knockdown (T0501), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CGAACCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Terf1 knockdown (T0499), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TAATCCGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Taf11 knockdown (T0502), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GGTTGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Thrap3 knockdown (T0493), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TACCGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Topors knockdown (T0492), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CCAACGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcf7 knockdown (T0491), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GTTCACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcf15 knockdown (T0498), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TTCGCGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tbx1 knockdown (T0508), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: CGTTCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tlr2 knockdown (T0490), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TCTCACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcea3 knockdown (T0489), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GGCGATAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sp1 knockdown (T0506), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GCTACCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcea1 knockdown (T0487), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: ATCCAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sept7 knockdown (T0486), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TCTCGTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarcb1 knockdown (T0488), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GAACACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Topbp1 knockdown (T0484), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: AGACTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sin3a knockdown (T0483), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TAGGCCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tcfl5 knockdown (T0485), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GGAAGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Son knockdown (T0500), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GTAGTGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0519), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: AGTGCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0481), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: TCCATGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbbp7 knockdown (T0477), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTAGTCGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rad54l knockdown (T0476), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACACGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbm15 knockdown (T0475), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GAGATGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ring1 knockdown (T0478), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACAGCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0480), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CACATGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbm11 knockdown (T0474), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AAGGATCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rhobtb2 knockdown (T0469), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CGTATTGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp1cc knockdown (T0468), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GTACGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rad50 knockdown (T0466), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGACCTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rxrb knockdown (T0472), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACCTCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pole knockdown (T0471), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TCGACTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Psen1 knockdown (T0473), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TACCTACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rest knockdown (T0464), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CAGTACTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sirt1 knockdown (T0494), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: ACTCTGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rnpep knockdown (T0461), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TCCTACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Upf1 knockdown (T0463), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ATGGCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarcad1 knockdown (T0462), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTTCACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rpl5 knockdown (T0467), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CCTTCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pms1 knockdown (T0465), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTACAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ran knockdown (T0479), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GAGTCTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hltf knockdown (T0455), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGTCAGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Setdb1 knockdown (T0459), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GCGCATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pcgf2 knockdown (T0457), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CGTTAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbm6 knockdown (T0456), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGCTGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbm5 knockdown (T0452), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CAACCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbms2 knockdown (T0449), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GGATAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Srsf7 knockdown (T0460), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGGTAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zbtb32 knockdown (T0470), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GCAAGGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Thoc1 knockdown (T0482), replicate 1

description:
Forward (i5) barcode: CCTATTGA, reverse (i7) barcode: GGTTAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sall1 knockdown (T0451), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACTGTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pola1 knockdown (T0450), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TCTGCTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp2r5c knockdown (T0446), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GAGAGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pold1 knockdown (T0447), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CGAATACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pop7 knockdown (T0445), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGCACTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Srsf2 knockdown (T0444), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CATGACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Srsf3 knockdown (T0442), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GTCTTGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0441), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ATCGTTCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rec8 knockdown (T0443), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGTCGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Polr2b knockdown (T0440), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CATCGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pot1a knockdown (T0458), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: ACAGAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rara knockdown (T0439), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGGAGTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp1r9b knockdown (T0437), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGTGACTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Slbp knockdown (T0438), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTGAACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prdm5 knockdown (T0454), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GACTGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rad18 knockdown (T0434), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GACAACTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp4r2 knockdown (T0453), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: AGCATCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sf3a3 knockdown (T0436), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: GGATGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0429), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GATGACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rad21 knockdown (T0431), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CTTGGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rfc1 knockdown (T0430), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CAGAAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rarg knockdown (T0432), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGTGACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sall4 knockdown (T0433), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TACGGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarca2 knockdown (T0422), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACTGTGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rps3 knockdown (T0426), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATGCGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0423), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCATCCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sart1 knockdown (T0448), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: TGGAACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Piwil2 knockdown (T0421), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACGTGTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp1r10 knockdown (T0420), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CTGAGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pprc1 knockdown (T0424), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GGATATCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Snupn knockdown (T0427), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TTCCATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Polb knockdown (T0428), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGAAGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ptbp1 knockdown (T0425), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGCAACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sall3 knockdown (T0415), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GAGTGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbmy1a1 knockdown (T0418), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TTGGTACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sub1 knockdown (T0417), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGGACTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp2r1a knockdown (T0412), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACAGCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Psen2 knockdown (T0413), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATAACGCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0411), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGCCTATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbbp4 knockdown (T0409), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AACCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Jmjd6 knockdown (T0416), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TTCGCCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pnn knockdown (T0410), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GAGACAGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rnf8 knockdown (T0407), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATGGTTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ruvbl2 knockdown (T0435), replicate 1

description:
Forward (i5) barcode: AGATCGTC, reverse (i7) barcode: CTGACACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Polr2g knockdown (T0408), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTCGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Riok2 knockdown (T0406), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GGTATTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp2r5a knockdown (T0404), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACACGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rfc4 knockdown (T0405), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGCTCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rad17 knockdown (T0419), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGTATACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp1r12a knockdown (T0403), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCTACGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rad51 knockdown (T0401), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACCACATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbms1 knockdown (T0402), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GAAGCATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pou2f1 knockdown (T0400), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ACCATGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sfpq knockdown (T0395), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTGAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Poll knockdown (T0396), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GGTTCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sfswap knockdown (T0414), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCGGATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rev3l knockdown (T0398), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTTCCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Piwil1 knockdown (T0397), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CCATTAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prpf8 knockdown (T0399), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AACGCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rangap1 knockdown (T0394), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTAGTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarca5 knockdown (T0392), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: GTGAACAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pinx1 knockdown (T0391), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CTCACAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rorc knockdown (T0388), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGTCCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Plrg1 knockdown (T0390), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: ATCCTACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Polr2a knockdown (T0393), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGCTGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prpf4 knockdown (T0387), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CATGTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarca4 knockdown (T0386), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: CGCGTTAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0385), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: TGTGTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0384), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCACAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pabpn1 knockdown (T0383), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACCTCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppil1 knockdown (T0380), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TATACGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nr2f2 knockdown (T0381), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGACGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mtf2 knockdown (T0378), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCCATCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Npas1 knockdown (T0382), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATGCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nbn knockdown (T0379), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGCCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mxi1 knockdown (T0376), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGGACTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbd1 knockdown (T0375), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTCACTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mecp2 knockdown (T0374), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTACGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phox2a knockdown (T0372), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACAGTGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prim1 knockdown (T0373), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GGTAGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcm3 knockdown (T0371), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CCGCTATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nfe2l2 knockdown (T0367), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CCTATAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppm1g knockdown (T0366), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CAGTCTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nol3 knockdown (T0369), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCAGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nr1h2 knockdown (T0370), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TATTGCGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppan knockdown (T0368), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ATGGAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ncoa3 knockdown (T0365), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TTGCGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Matr3 knockdown (T0362), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATCTGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mnt knockdown (T0364), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CGTTGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nsd1 knockdown (T0361), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ACACCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Sf3a1 knockdown (T0389), replicate 1

description:
Forward (i5) barcode: ACACAGCT, reverse (i7) barcode: AGGTTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pcbp2 knockdown (T0363), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGGCCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcm6 knockdown (T0360), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CAAGTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppargc1a knockdown (T0377), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAGGTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Msh3 knockdown (T0358), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CACTTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nusap1 knockdown (T0350), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GATCGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nr6a1 knockdown (T0359), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGCTAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phf2 knockdown (T0351), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCTCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nr1d1 knockdown (T0357), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGGTTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mef2d knockdown (T0349), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AACCTACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mlh1 knockdown (T0347), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GGTAATGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prkrir knockdown (T0356), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGTCCACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcm4 knockdown (T0353), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGAGGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ndel1 knockdown (T0355), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TAATCGGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pcna knockdown (T0352), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCTGCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ncor2 knockdown (T0346), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TACGTAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0345), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CGTTAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ndrg2 knockdown (T0343), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGAGTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ybx1 knockdown (T0344), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TGCAGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Orc6 knockdown (T0341), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GTCAAGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mre11a knockdown (T0338), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGGTACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ncor1 knockdown (T0336), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACGACATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pou6f1 knockdown (T0335), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTCTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0333), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TAGGTTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ndrg1 knockdown (T0331), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GACATGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nfe2l1 knockdown (T0354), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: AGTGGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Msh6 knockdown (T0332), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TACGCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pcbp4 knockdown (T0339), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCAGGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Paxip1 knockdown (T0330), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCCTCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcm7 knockdown (T0348), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: CTACTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nras knockdown (T0326), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGGTTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nr2f6 knockdown (T0325), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AAGCTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nr1d2 knockdown (T0329), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTAGTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcm5 knockdown (T0328), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CACTTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbtd1 knockdown (T0323), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GATGGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nfyb knockdown (T0321), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AAGCCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbd3 knockdown (T0324), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACTGTCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mef2a knockdown (T0322), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GACACTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mll1 knockdown (T0319), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTTCCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phip knockdown (T0320), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GAAGACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbd2 knockdown (T0337), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: GAAGAGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nr4a1 knockdown (T0318), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTCATCTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nde1 knockdown (T0317), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTAGCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0315), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACTCAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Spen knockdown (T0342), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: TCGTAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nfil3 knockdown (T0313), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGACCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phox2b knockdown (T0312), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTTATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mki67ip knockdown (T0314), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGCGAATA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcm3ap knockdown (T0311), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCGTTGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mxd4 knockdown (T0310), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTAGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0327), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTGGCGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nfyc knockdown (T0309), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GAGTCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppargc1b knockdown (T0308), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ACCAACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kat2b knockdown (T0306), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TCGAAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab