title: GBM cell 1397

description:
Single cell from Tumor
1001000031.D3


title: GBM cell 1376

status: Public on Nov 01 2017

type: SRA

city: Stanford

first: Spyros

last: Darmanis

state: California

address: Clark Center, E300

department: Bioengineering

country: USA

institute: Stanford University

description:
Single cell from Tumor
1001000031.C6

library_source: transcriptomic

data_processing:
Short read trimming: Prinseq to remove short reads (-min_len 30) trim the first 10 bp on the 5’-end (-trim_left 10), trim reads with low quality on the 3’-end (-trim_qual_right 25) and filter low complexity reads (-lc_method entropy \-lc_threshold 65).  We used FASTQC to determine overrepresented sequences and removed those using cutadapt (-e 0.15 –m 30). We then used Prinseq to remove orphan pairs less than 30bp in length followed by removal of nextera adapters using Trim Galore  (--stringency 1).
Read alignment: reads were aligned to the hg19 genome with STAR using the following options (-outFilterType BySJout \--outFilterMultimapNmax 20 \--alignSJoverhangMin 8 \--alignSJDBoverhangMin 1 \--outFilterMismatchNmax 999 \--outFilterMismatchNoverLmax 0.04 \--alignIntronMin 20 \--alignIntronMax 1000000 \--alignMatesGapMax 1000000 \--outSAMstrandField intronMotif ).
Per-gene read assignement: aligned reads were converted to counts for every gene using HTSeq (-m intersection-nonempty \-s no).
Genome_build: hg19
Supplementary_files_format_and_content: tab-delimited text files with raw read values for each sample

molecule: polyA RNA

organism: Homo sapiens

source_name: Brain

extract_protocol:
single-cell sorting in 96-well plates followed by cDNA preparation using Smart-seq2
Smart-Seq2 for preparation of cDNA followed by library preparation using Nextera XT. Nextera tagmentation according to the standard protocol for single cell RNA-seq following Smart-Seq2

tag: diagnosis

value: glioblastoma

tag: plate id

tag: well

tag: tissue

value: Tumor

tag: patient id

tag: tsne cluster

tag: cell type

value: Neoplastic

tag: neoplastic

tag: selection

value: Endothelial(BSC)


title: GBM cell 1375

description:
Single cell from Tumor
1001000031.A11


title: GBM cell 1374

description:
Single cell from Tumor
1001000031.H5


title: GBM cell 1371

description:
Single cell from Tumor
1001000031.C9


title: GBM cell 1373

description:
Single cell from Tumor
1001000031.D1

value: Vascular

value: Regular


title: GBM cell 1372

description:
Single cell from Tumor
1001000031.D6


title: GBM cell 1368

description:
Single cell from Tumor
1001000031.G4


title: GBM cell 1366

description:
Single cell from Tumor
1001000031.A12


title: GBM cell 1369

description:
Single cell from Tumor
1001000031.F10


title: GBM cell 1367

description:
Single cell from Tumor
1001000031.F2


title: GBM cell 1364

description:
Single cell from Tumor
1001000031.C8


title: GBM cell 1365

description:
Single cell from Tumor
1001000031.D2


title: GBM cell 1363

description:
Single cell from Tumor
1001000031.C12


title: GBM cell 1383

description:
Single cell from Tumor
1001000031.F11


title: GBM cell 1362

description:
Single cell from Tumor
1001000031.A6


title: GBM cell 1358

description:
Single cell from Tumor
1001000031.B8


title: GBM cell 1359

description:
Single cell from Tumor
1001000031.G6


title: GBM cell 1357

description:
Single cell from Tumor
1001000031.D10


title: GBM cell 1378

description:
Single cell from Tumor
1001000031.E3


title: GBM cell 1356

description:
Single cell from Tumor
1001000031.G3


title: GBM cell 1381

description:
Single cell from Tumor
1001000031.E11


title: GBM cell 1377

description:
Single cell from Tumor
1001000031.B10


title: GBM cell 1351

description:
Single cell from Tumor
1001000031.A1


title: GBM cell 1354

description:
Single cell from Tumor
1001000031.B5


title: GBM cell 1355

description:
Single cell from Tumor
1001000031.C5


title: GBM cell 1370

description:
Single cell from Tumor
1001000031.E10


title: GBM cell 1349

description:
Single cell from Tumor
1001000031.F6


title: GBM cell 1348

description:
Single cell from Tumor
1001000031.C4

value: OPC


title: GBM cell 1353

description:
Single cell from Tumor
1001000031.D8


title: GBM cell 1347

description:
Single cell from Tumor
1001000031.H2


title: GBM cell 1361

description:
Single cell from Tumor
1001000031.A8

value: Immune cell


title: GBM cell 1345

description:
Single cell from Tumor
1001000031.B11


title: GBM cell 1341

description:
Single cell from Periphery
1001000028.C6

value: Periphery

value: Astrocytes(HEPACAM)


title: GBM cell 1342

description:
Single cell from Tumor
1001000031.B4


title: GBM cell 1346

description:
Single cell from Tumor
1001000031.G8


title: GBM cell 1343

description:
Single cell from Tumor
1001000031.B3


title: GBM cell 1352

description:
Single cell from Tumor
1001000031.F5


title: GBM cell 1360

description:
Single cell from Tumor
1001000031.D11


title: GBM cell 1340

description:
Single cell from Periphery
1001000028.F6


title: GBM cell 1350

description:
Single cell from Tumor
1001000031.B7


title: GBM cell 1339

description:
Single cell from Periphery
1001000028.D10

value: Astocyte


title: GBM cell 1338

description:
Single cell from Periphery
1001000019.E3

value: Oligodendrocyte


title: GBM cell 1336

description:
Single cell from Periphery
1001000019.D5


title: GBM cell 1337

description:
Single cell from Periphery
1001000019.G12


title: GBM cell 1334

description:
Single cell from Periphery
1001000019.C1


title: GBM cell 1333

description:
Single cell from Periphery
1001000019.B10


title: GBM cell 1335

description:
Single cell from Periphery
1001000019.A3


title: GBM cell 1332

description:
Single cell from Periphery
1001000019.F9


title: GBM cell 1327

description:
Single cell from Periphery
1001000019.C6


title: GBM cell 1326

description:
Single cell from Periphery
1001000019.B5


title: GBM cell 1331

description:
Single cell from Periphery
1001000019.F6


title: GBM cell 1330

description:
Single cell from Periphery
1001000019.G9


title: GBM cell 1328

description:
Single cell from Periphery
1001000019.C2


title: GBM cell 1325

description:
Single cell from Periphery
1001000018.F11


title: GBM cell 1329

description:
Single cell from Periphery
1001000019.B12


title: GBM cell 1323

description:
Single cell from Periphery
1001000018.C1


title: GBM cell 1320

description:
Single cell from Tumor
1001000017.F7

value: Oligodendrocytes(GC)


title: GBM cell 1321

description:
Single cell from Tumor
1001000017.B12


title: GBM cell 1322

description:
Single cell from Tumor
1001000017.H4


title: GBM cell 1344

description:
Single cell from Tumor
1001000031.F12


title: GBM cell 1318

description:
Single cell from Tumor
1001000017.G9


title: GBM cell 1316

description:
Single cell from Tumor
1001000017.D8


title: GBM cell 1313

description:
Single cell from Tumor
1001000017.A6


title: GBM cell 1312

description:
Single cell from Tumor
1001000017.B5


title: GBM cell 1315

description:
Single cell from Tumor
1001000017.G5


title: GBM cell 1310

description:
Single cell from Tumor
1001000017.F10


title: GBM cell 1324

description:
Single cell from Periphery
1001000018.D10


title: GBM cell 1308

description:
Single cell from Tumor
1001000017.D9


title: GBM cell 1306

description:
Single cell from Tumor
1001000017.B1


title: GBM cell 1317

description:
Single cell from Tumor
1001000017.F5


title: GBM cell 1314

description:
Single cell from Tumor
1001000017.E5


title: GBM cell 1305

description:
Single cell from Tumor
1001000017.E10


title: GBM cell 1303

description:
Single cell from Tumor
1001000017.C9


title: GBM cell 1304

description:
Single cell from Tumor
1001000017.E12


title: GBM cell 1307

description:
Single cell from Tumor
1001000017.G1


title: GBM cell 1302

description:
Single cell from Tumor
1001000017.D10


title: GBM cell 1301

description:
Single cell from Tumor
1001000017.F6


title: GBM cell 1299

description:
Single cell from Tumor
1001000017.E2


title: GBM cell 1300

description:
Single cell from Tumor
1001000017.F12


title: GBM cell 1297

description:
Single cell from Tumor
1001000017.A8


title: GBM cell 1319

description:
Single cell from Tumor
1001000017.D1


title: GBM cell 1298

description:
Single cell from Tumor
1001000017.B7


title: GBM cell 1309

description:
Single cell from Tumor
1001000017.B3


title: GBM cell 1296

description:
Single cell from Tumor
1001000017.G11


title: GBM cell 1295

description:
Single cell from Tumor
1001000017.H7


title: GBM cell 1293

description:
Single cell from Tumor
1001000017.A9


title: GBM cell 1290

description:
Single cell from Tumor
1001000017.C10


title: GBM cell 1311

description:
Single cell from Tumor
1001000017.E4


title: GBM cell 1292

description:
Single cell from Tumor
1001000017.F3


title: GBM cell 1291

description:
Single cell from Tumor
1001000017.A4


title: GBM cell 1288

description:
Single cell from Periphery
1001000015.B2


title: GBM cell 1284

description:
Single cell from Periphery
1001000014.G12


title: GBM cell 1294

description:
Single cell from Tumor
1001000017.A11


title: GBM cell 1289

description:
Single cell from Tumor
1001000017.A3


title: GBM cell 1287

description:
Single cell from Periphery
1001000014.E5


title: GBM cell 1286

description:
Single cell from Periphery
1001000014.F11


title: GBM cell 1281

description:
Single cell from Periphery
1001000014.E6


title: GBM cell 1285

description:
Single cell from Periphery
1001000014.C1


title: GBM cell 1279

description:
Single cell from Periphery
1001000014.F6


title: GBM cell 1278

description:
Single cell from Periphery
1001000014.E3


title: GBM cell 1282

description:
Single cell from Periphery
1001000014.D12


title: GBM cell 1276

description:
Single cell from Periphery
1001000014.E9


title: GBM cell 1275

description:
Single cell from Periphery
1001000014.G7


title: GBM cell 1273

description:
Single cell from Periphery
1001000014.H9


title: GBM cell 1271

description:
Single cell from Tumor
1001000012.F12


title: GBM cell 1272

description:
Single cell from Tumor
1001000012.G11


title: GBM cell 1274

description:
Single cell from Periphery
1001000014.B2


title: GBM cell 1270

description:
Single cell from Tumor
1001000012.A12


title: GBM cell 1269

description:
Single cell from Tumor
1001000012.D12


title: GBM cell 1267

description:
Single cell from Tumor
1001000012.E11


title: GBM cell 1268

description:
Single cell from Tumor
1001000012.B12


title: GBM cell 1265

description:
Single cell from Tumor
1001000012.E12


title: GBM cell 1264

description:
Single cell from Tumor
1001000012.F11


title: GBM cell 1262

description:
Single cell from Tumor
1001000012.D6


title: GBM cell 1263

description:
Single cell from Tumor
1001000012.C12


title: GBM cell 1260

description:
Single cell from Tumor
1001000012.G2


title: GBM cell 1283

description:
Single cell from Periphery
1001000014.D6


title: GBM cell 1280

description:
Single cell from Periphery
1001000014.C3


title: GBM cell 1261

description:
Single cell from Tumor
1001000012.A7


title: GBM cell 1258

description:
Single cell from Tumor
1001000012.H8


title: GBM cell 1256

description:
Single cell from Tumor
1001000012.H4


title: GBM cell 1254

description:
Single cell from Tumor
1001000012.D9


title: GBM cell 1259

description:
Single cell from Tumor
1001000012.H3


title: GBM cell 1277

description:
Single cell from Periphery
1001000014.C8


title: GBM cell 1255

description:
Single cell from Tumor
1001000012.C11


title: GBM cell 1257

description:
Single cell from Tumor
1001000012.E7


title: GBM cell 1253

description:
Single cell from Tumor
1001000012.F5


title: GBM cell 1266

description:
Single cell from Tumor
1001000012.G12


title: GBM cell 1250

description:
Single cell from Tumor
1001000012.G3


title: GBM cell 1248

description:
Single cell from Tumor
1001000012.D1


title: GBM cell 1251

description:
Single cell from Tumor
1001000012.H1


title: GBM cell 1249

description:
Single cell from Tumor
1001000012.H7


title: GBM cell 1252

description:
Single cell from Tumor
1001000012.A2


title: GBM cell 1247

description:
Single cell from Tumor
1001000012.C8


title: GBM cell 1246

description:
Single cell from Tumor
1001000012.B4


title: GBM cell 1243

description:
Single cell from Tumor
1001000012.D11


title: GBM cell 1244

description:
Single cell from Tumor
1001000012.H10


title: GBM cell 1245

description:
Single cell from Tumor
1001000012.B6


title: GBM cell 1242

description:
Single cell from Tumor
1001000012.B8


title: GBM cell 1241

description:
Single cell from Tumor
1001000012.A3


title: GBM cell 1240

description:
Single cell from Tumor
1001000012.H2


title: GBM cell 1238

description:
Single cell from Tumor
1001000012.D2


title: GBM cell 1235

description:
Single cell from Tumor
1001000012.B10


title: GBM cell 1234

description:
Single cell from Tumor
1001000012.B7


title: GBM cell 1237

description:
Single cell from Tumor
1001000012.A10


title: GBM cell 1236

description:
Single cell from Tumor
1001000012.B11


title: GBM cell 1232

description:
Single cell from Tumor
1001000012.G6


title: GBM cell 1233

description:
Single cell from Tumor
1001000012.D4


title: GBM cell 1231

description:
Single cell from Tumor
1001000012.C2


title: GBM cell 1230

description:
Single cell from Tumor
1001000012.A6


title: GBM cell 1229

description:
Single cell from Tumor
1001000012.C10


title: GBM cell 1227

description:
Single cell from Tumor
1001000012.C9


title: GBM cell 1224

description:
Single cell from Tumor
1001000012.G10


title: GBM cell 1225

description:
Single cell from Tumor
1001000012.B3


title: GBM cell 1222

description:
Single cell from Tumor
1001000012.G7


title: GBM cell 1226

description:
Single cell from Tumor
1001000012.C1


title: GBM cell 1220

description:
Single cell from Tumor
1001000012.G9


title: GBM cell 1214

description:
Single cell from Tumor
1001000012.H6


title: GBM cell 1219

description:
Single cell from Tumor
1001000012.F8


title: GBM cell 1217

description:
Single cell from Tumor
1001000012.C6


title: GBM cell 1213

description:
Single cell from Tumor
1001000012.F4


title: GBM cell 1215

description:
Single cell from Tumor
1001000012.F9


title: GBM cell 1216

description:
Single cell from Tumor
1001000012.C4


title: GBM cell 1212

description:
Single cell from Tumor
1001000012.F7


title: GBM cell 1239

description:
Single cell from Tumor
1001000012.D3


title: GBM cell 1210

description:
Single cell from Tumor
1001000012.A4


title: GBM cell 1211

description:
Single cell from Tumor
1001000012.G1


title: GBM cell 1209

description:
Single cell from Tumor
1001000012.F2


title: GBM cell 1208

description:
Single cell from Tumor
1001000012.E6


title: GBM cell 1207

description:
Single cell from Tumor
1001000012.A8


title: GBM cell 1206

description:
Single cell from Tumor
1001000012.H9


title: GBM cell 1228

description:
Single cell from Tumor
1001000012.B5


title: GBM cell 1205

description:
Single cell from Tumor
1001000012.D5


title: GBM cell 1204

description:
Single cell from Tumor
1001000012.G8


title: GBM cell 1203

description:
Single cell from Tumor
1001000012.B2


title: GBM cell 1223

description:
Single cell from Tumor
1001000012.D8


title: GBM cell 1199

description:
Single cell from Tumor
1001000012.C5


title: GBM cell 1202

description:
Single cell from Tumor
1001000012.D10


title: GBM cell 1200

description:
Single cell from Tumor
1001000012.A5


title: GBM cell 1198

description:
Single cell from Tumor
1001000012.G5


title: GBM cell 1201

description:
Single cell from Tumor
1001000012.B1


title: GBM cell 1197

description:
Single cell from Tumor
1001000012.A9


title: GBM cell 1221

description:
Single cell from Tumor
1001000012.A1


title: GBM cell 1195

description:
Single cell from Tumor
1001000012.F3


title: GBM cell 1194

description:
Single cell from Tumor
1001000012.E4


title: GBM cell 1192

description:
Single cell from Tumor
1001000012.G4


title: GBM cell 1188

description:
Single cell from Tumor
1001000012.E1


title: GBM cell 1218

description:
Single cell from Tumor
1001000012.C3


title: GBM cell 1196

description:
Single cell from Tumor
1001000012.H5


title: GBM cell 1190

description:
Single cell from Tumor
1001000012.F1


title: GBM cell 1187

description:
Single cell from Tumor
1001000012.E3


title: GBM cell 1191

description:
Single cell from Tumor
1001000012.E9


title: GBM cell 1186

description:
Single cell from Tumor
1001000012.A11


title: GBM cell 1184

description:
Single cell from Periphery
1001000010.F1


title: GBM cell 1183

description:
Single cell from Periphery
1001000010.B5


title: GBM cell 1185

description:
Single cell from Tumor
1001000012.C7


title: GBM cell 1180

description:
Single cell from Periphery
1001000010.G2


title: GBM cell 1189

description:
Single cell from Tumor
1001000012.E10


title: GBM cell 1179

description:
Single cell from Periphery
1001000010.F8


title: GBM cell 1182

description:
Single cell from Periphery
1001000010.C5


title: GBM cell 1177

description:
Single cell from Periphery
1001000010.E8


title: GBM cell 1176

description:
Single cell from Periphery
1001000010.F7


title: GBM cell 1178

description:
Single cell from Periphery
1001000010.D5


title: GBM cell 1175

description:
Single cell from Periphery
1001000010.F10


title: GBM cell 1181

description:
Single cell from Periphery
1001000010.B4


title: GBM cell 1174

description:
Single cell from Periphery
1001000010.H3


title: GBM cell 1171

description:
Single cell from Periphery
1001000010.C1


title: GBM cell 1173

description:
Single cell from Periphery
1001000010.G3


title: GBM cell 1170

description:
Single cell from Periphery
1001000010.D9


title: GBM cell 1169

description:
Single cell from Periphery
1001000194.C8


title: GBM cell 1167

description:
Single cell from Periphery
1001000194.C5


title: GBM cell 1168

description:
Single cell from Periphery
1001000194.G12


title: GBM cell 1166

description:
Single cell from Periphery
1001000194.E8


title: GBM cell 1193

description:
Single cell from Tumor
1001000012.F6


title: GBM cell 1164

description:
Single cell from Periphery
1001000194.F5


title: GBM cell 1162

description:
Single cell from Periphery
1001000194.G3


title: GBM cell 1163

description:
Single cell from Periphery
1001000194.G11


title: GBM cell 1160

description:
Single cell from Periphery
1001000187.E10


title: GBM cell 1159

description:
Single cell from Periphery
1001000187.A1


title: GBM cell 1158

description:
Single cell from Periphery
1001000187.B3


title: GBM cell 1161

description:
Single cell from Tumor
1001000191.B4


title: GBM cell 1165

description:
Single cell from Periphery
1001000194.G10


title: GBM cell 1155

description:
Single cell from Periphery
1001000187.C3


title: GBM cell 1157

description:
Single cell from Periphery
1001000187.E5


title: GBM cell 1152

description:
Single cell from Periphery
1001000187.F3

value: Neuron


title: GBM cell 1154

description:
Single cell from Periphery
1001000187.D6


title: GBM cell 1149

description:
Single cell from Periphery
1001000187.F10


title: GBM cell 1151

description:
Single cell from Periphery
1001000187.B1


title: GBM cell 1156

description:
Single cell from Periphery
1001000187.G11


title: GBM cell 1153

description:
Single cell from Periphery
1001000187.C12


title: GBM cell 1148

description:
Single cell from Periphery
1001000187.F9


title: GBM cell 1150

description:
Single cell from Periphery
1001000187.H2


title: GBM cell 1147

description:
Single cell from Periphery
1001000187.B8


title: GBM cell 1172

description:
Single cell from Periphery
1001000010.C8


title: GBM cell 1146

description:
Single cell from Periphery
1001000187.A4


title: GBM cell 1145

description:
Single cell from Periphery
1001000187.E12


title: GBM cell 1143

description:
Single cell from Periphery
1001000187.G1


title: GBM cell 1140

description:
Single cell from Periphery
1001000187.G8


title: GBM cell 1139

description:
Single cell from Periphery
1001000187.D9


title: GBM cell 1142

description:
Single cell from Periphery
1001000187.H11


title: GBM cell 1137

description:
Single cell from Periphery
1001000187.E3


title: GBM cell 1135

description:
Single cell from Periphery
1001000187.D12


title: GBM cell 1136

description:
Single cell from Periphery
1001000187.G12


title: GBM cell 1134

description:
Single cell from Periphery
1001000187.E2


title: GBM cell 1133

description:
Single cell from Periphery
1001000187.E9


title: GBM cell 1132

description:
Single cell from Periphery
1001000187.C6


title: GBM cell 1131

description:
Single cell from Periphery
1001000187.H5


title: GBM cell 1129

description:
Single cell from Periphery
1001000187.A2


title: GBM cell 1128

description:
Single cell from Periphery
1001000187.B5


title: GBM cell 1127

description:
Single cell from Periphery
1001000187.G5


title: GBM cell 1125

description:
Single cell from Periphery
1001000187.B11


title: GBM cell 1126

description:
Single cell from Periphery
1001000187.F6


title: GBM cell 1124

description:
Single cell from Periphery
1001000187.H7


title: GBM cell 1121

description:
Single cell from Periphery
1001000187.A12


title: GBM cell 1120

description:
Single cell from Periphery
1001000187.B7


title: GBM cell 1119

description:
Single cell from Periphery
1001000187.F2


title: GBM cell 1122

description:
Single cell from Periphery
1001000187.A9


title: GBM cell 1123

description:
Single cell from Periphery
1001000187.D7


title: GBM cell 1144

description:
Single cell from Periphery
1001000187.C4


title: GBM cell 1141

description:
Single cell from Periphery
1001000187.B10


title: GBM cell 1118

description:
Single cell from Periphery
1001000187.H3


title: GBM cell 1117

description:
Single cell from Periphery
1001000187.E4


title: GBM cell 1115

description:
Single cell from Periphery
1001000187.H1


title: GBM cell 1116

description:
Single cell from Periphery
1001000187.C5


title: GBM cell 1114

description:
Single cell from Periphery
1001000187.C2


title: GBM cell 1130

description:
Single cell from Periphery
1001000187.G9


title: GBM cell 1112

description:
Single cell from Periphery
1001000187.H8


title: GBM cell 1107

description:
Single cell from Periphery
1001000187.F11


title: GBM cell 1113

description:
Single cell from Periphery
1001000187.E11


title: GBM cell 1106

description:
Single cell from Periphery
1001000187.A7


title: GBM cell 1104

description:
Single cell from Periphery
1001000187.C7


title: GBM cell 1108

description:
Single cell from Periphery
1001000187.F8


title: GBM cell 1110

description:
Single cell from Periphery
1001000187.D8


title: GBM cell 1105

description:
Single cell from Periphery
1001000187.F5


title: GBM cell 1102

description:
Single cell from Periphery
1001000187.G10


title: GBM cell 1103

description:
Single cell from Periphery
1001000187.D2


title: GBM cell 1096

description:
Single cell from Periphery
1001000187.D11


title: GBM cell 1097

description:
Single cell from Periphery
1001000187.C1


title: GBM cell 1101

description:
Single cell from Periphery
1001000187.G2


title: GBM cell 1092

description:
Single cell from Periphery
1001000187.D1


title: GBM cell 1138

description:
Single cell from Periphery
1001000187.F4


title: GBM cell 1090

description:
Single cell from Periphery
1001000187.F7


title: GBM cell 1088

description:
Single cell from Periphery
1001000187.H6


title: GBM cell 1086

description:
Single cell from Periphery
1001000187.A8


title: GBM cell 1100

description:
Single cell from Periphery
1001000187.B4


title: GBM cell 1087

description:
Single cell from Periphery
1001000187.A11


title: GBM cell 1099

description:
Single cell from Periphery
1001000187.G3


title: GBM cell 1098

description:
Single cell from Periphery
1001000187.B12


title: GBM cell 1095

description:
Single cell from Periphery
1001000187.C8


title: GBM cell 1085

description:
Single cell from Periphery
1001000187.A3


title: GBM cell 1080

description:
Single cell from Periphery
1001000186.G5


title: GBM cell 1093

description:
Single cell from Periphery
1001000187.B6


title: GBM cell 1078

description:
Single cell from Periphery
1001000186.E5


title: GBM cell 1077

description:
Single cell from Periphery
1001000186.H9


title: GBM cell 1075

description:
Single cell from Periphery
1001000186.A12


title: GBM cell 1072

description:
Single cell from Periphery
1001000186.C12


title: GBM cell 1091

description:
Single cell from Periphery
1001000187.B9


title: GBM cell 1089

description:
Single cell from Periphery
1001000187.G6


title: GBM cell 1111

description:
Single cell from Periphery
1001000187.E6


title: GBM cell 1109

description:
Single cell from Periphery
1001000187.B2


title: GBM cell 1084

description:
Single cell from Periphery
1001000187.F1


title: GBM cell 1083

description:
Single cell from Periphery
1001000186.D3


title: GBM cell 1079

description:
Single cell from Periphery
1001000186.B11


title: GBM cell 1081

description:
Single cell from Periphery
1001000186.F10


title: GBM cell 1094

description:
Single cell from Periphery
1001000187.G4


title: GBM cell 1063

description:
Single cell from Periphery
1001000186.G9


title: GBM cell 1068

description:
Single cell from Periphery
1001000186.D7


title: GBM cell 1082

description:
Single cell from Periphery
1001000186.C9


title: GBM cell 1060

description:
Single cell from Periphery
1001000186.H2


title: GBM cell 1076

description:
Single cell from Periphery
1001000186.E8


title: GBM cell 1074

description:
Single cell from Periphery
1001000186.G8


title: GBM cell 1073

description:
Single cell from Periphery
1001000186.D5


title: GBM cell 1071

description:
Single cell from Periphery
1001000186.D11


title: GBM cell 1070

description:
Single cell from Periphery
1001000186.H6


title: GBM cell 1069

description:
Single cell from Periphery
1001000186.G10


title: GBM cell 1067

description:
Single cell from Periphery
1001000186.E9


title: GBM cell 1065

description:
Single cell from Periphery
1001000186.B2


title: GBM cell 1064

description:
Single cell from Periphery
1001000186.A6


title: GBM cell 1053

description:
Single cell from Periphery
1001000186.F9


title: GBM cell 1054

description:
Single cell from Periphery
1001000186.F11


title: GBM cell 1052

description:
Single cell from Periphery
1001000186.A9


title: GBM cell 1066

description:
Single cell from Periphery
1001000186.A10


title: GBM cell 1062

description:
Single cell from Periphery
1001000186.D1


title: GBM cell 1050

description:
Single cell from Periphery
1001000186.C1


title: GBM cell 1049

description:
Single cell from Periphery
1001000186.D12


title: GBM cell 1061

description:
Single cell from Periphery
1001000186.D9


title: GBM cell 1059

description:
Single cell from Periphery
1001000186.C6


title: GBM cell 1058

description:
Single cell from Periphery
1001000186.C10


title: GBM cell 1051

description:
Single cell from Periphery
1001000186.H5


title: GBM cell 1047

description:
Single cell from Periphery
1001000186.D4


title: GBM cell 1046

description:
Single cell from Periphery
1001000186.E11


title: GBM cell 1044

description:
Single cell from Periphery
1001000186.H3


title: GBM cell 1045

description:
Single cell from Periphery
1001000186.F1


title: GBM cell 1057

description:
Single cell from Periphery
1001000186.F5


title: GBM cell 1043

description:
Single cell from Periphery
1001000186.F7


title: GBM cell 1056

description:
Single cell from Periphery
1001000186.C7


title: GBM cell 1042

description:
Single cell from Periphery
1001000186.C4


title: GBM cell 1041

description:
Single cell from Periphery
1001000186.E7


title: GBM cell 1040

description:
Single cell from Periphery
1001000186.D6


title: GBM cell 1055

description:
Single cell from Periphery
1001000186.E6


title: GBM cell 1036

description:
Single cell from Periphery
1001000186.G4


title: GBM cell 1037

description:
Single cell from Periphery
1001000186.D8


title: GBM cell 1039

description:
Single cell from Periphery
1001000186.G1


title: GBM cell 1038

description:
Single cell from Periphery
1001000186.H7


title: GBM cell 1034

description:
Single cell from Periphery
1001000186.H4


title: GBM cell 1033

description:
Single cell from Periphery
1001000186.G12


title: GBM cell 1031

description:
Single cell from Periphery
1001000186.A2


title: GBM cell 1030

description:
Single cell from Periphery
1001000186.F6


title: GBM cell 1027

description:
Single cell from Periphery
1001000186.B10


title: GBM cell 1029

description:
Single cell from Periphery
1001000186.C8


title: GBM cell 1048

description:
Single cell from Periphery
1001000186.B7


title: GBM cell 1028

description:
Single cell from Periphery
1001000186.B4


title: GBM cell 1025

description:
Single cell from Periphery
1001000186.B6


title: GBM cell 1026

description:
Single cell from Periphery
1001000186.E4


title: GBM cell 1023

description:
Single cell from Periphery
1001000186.D2


title: GBM cell 1032

description:
Single cell from Periphery
1001000186.E10


title: GBM cell 1021

description:
Single cell from Tumor
1001000185.H4


title: GBM cell 1022

description:
Single cell from Tumor
1001000185.F7


title: GBM cell 1020

description:
Single cell from Tumor
1001000185.D12


title: GBM cell 1018

description:
Single cell from Tumor
1001000185.H7


title: GBM cell 1017

description:
Single cell from Tumor
1001000185.B2


title: GBM cell 1014

description:
Single cell from Tumor
1001000185.G3


title: GBM cell 1013

description:
Single cell from Tumor
1001000185.G4


title: GBM cell 1016

description:
Single cell from Tumor
1001000185.A2


title: GBM cell 1015

description:
Single cell from Tumor
1001000185.C2


title: GBM cell 1035

description:
Single cell from Periphery
1001000186.E1


title: GBM cell 1019

description:
Single cell from Tumor
1001000185.E7


title: GBM cell 1011

description:
Single cell from Tumor
1001000185.F5


title: GBM cell 1012

description:
Single cell from Tumor
1001000185.C6


title: GBM cell 1007

description:
Single cell from Tumor
1001000185.B4


title: GBM cell 1008

description:
Single cell from Tumor
1001000185.D1


title: GBM cell 1010

description:
Single cell from Tumor
1001000185.E9


title: GBM cell 1006

description:
Single cell from Tumor
1001000185.E2


title: GBM cell 1003

description:
Single cell from Tumor
1001000185.B11


title: GBM cell 1000

description:
Single cell from Tumor
1001000185.F1


title: GBM cell 1001

description:
Single cell from Tumor
1001000185.G1


title: GBM cell 1005

description:
Single cell from Tumor
1001000185.A9


title: GBM cell 1002

description:
Single cell from Tumor
1001000185.F3


title: GBM cell 997

description:
Single cell from Tumor
1001000185.F11


title: GBM cell 1024

description:
Single cell from Periphery
1001000186.E12


title: GBM cell 1004

description:
Single cell from Tumor
1001000185.C4


title: GBM cell 998

description:
Single cell from Tumor
1001000185.B1


title: GBM cell 995

description:
Single cell from Tumor
1001000185.B6


title: GBM cell 996

description:
Single cell from Tumor
1001000185.E4


title: GBM cell 994

description:
Single cell from Tumor
1001000185.H1


title: GBM cell 993

description:
Single cell from Tumor
1001000185.E10


title: GBM cell 1009

description:
Single cell from Tumor
1001000185.H9


title: GBM cell 991

description:
Single cell from Tumor
1001000185.G12


title: GBM cell 992

description:
Single cell from Tumor
1001000185.A12


title: GBM cell 986

description:
Single cell from Tumor
1001000185.F8


title: GBM cell 999

description:
Single cell from Tumor
1001000185.A6


title: GBM cell 985

description:
Single cell from Tumor
1001000185.G7


title: GBM cell 987

description:
Single cell from Tumor
1001000185.C1


title: GBM cell 989

description:
Single cell from Tumor
1001000185.D6


title: GBM cell 983

description:
Single cell from Tumor
1001000185.C8


title: GBM cell 978

description:
Single cell from Tumor
1001000185.D7


title: GBM cell 979

description:
Single cell from Tumor
1001000185.E1


title: GBM cell 984

description:
Single cell from Tumor
1001000185.A4


title: GBM cell 976

description:
Single cell from Tumor
1001000185.G5


title: GBM cell 977

description:
Single cell from Tumor
1001000185.A8


title: GBM cell 981

description:
Single cell from Tumor
1001000185.B8


title: GBM cell 970

description:
Single cell from Tumor
1001000185.E8


title: GBM cell 974

description:
Single cell from Tumor
1001000185.C3


title: GBM cell 972

description:
Single cell from Tumor
1001000185.A3


title: GBM cell 971

description:
Single cell from Tumor
1001000185.G8


title: GBM cell 990

description:
Single cell from Tumor
1001000185.H2


title: GBM cell 975

description:
Single cell from Tumor
1001000185.D9


title: GBM cell 969

description:
Single cell from Tumor
1001000185.B5


title: GBM cell 988

description:
Single cell from Tumor
1001000185.H11


title: GBM cell 968

description:
Single cell from Tumor
1001000185.F10


title: GBM cell 966

description:
Single cell from Tumor
1001000185.A1


title: GBM cell 965

description:
Single cell from Tumor
1001000185.B7


title: GBM cell 980

description:
Single cell from Tumor
1001000185.E6


title: GBM cell 982

description:
Single cell from Tumor
1001000185.D11


title: GBM cell 967

description:
Single cell from Tumor
1001000185.E3


title: GBM cell 964

description:
Single cell from Tumor
1001000185.G2


title: GBM cell 962

description:
Single cell from Tumor
1001000185.C5


title: GBM cell 959

description:
Single cell from Tumor
1001000185.H5


title: GBM cell 958

description:
Single cell from Tumor
1001000185.E11


title: GBM cell 960

description:
Single cell from Tumor
1001000185.F4


title: GBM cell 973

description:
Single cell from Tumor
1001000185.F6


title: GBM cell 956

description:
Single cell from Tumor
1001000185.D3


title: GBM cell 952

description:
Single cell from Tumor
1001000185.A7


title: GBM cell 950

description:
Single cell from Tumor
1001000185.D5


title: GBM cell 961

description:
Single cell from Tumor
1001000185.H8


title: GBM cell 946

description:
Single cell from Tumor
1001000185.G11


title: GBM cell 949

description:
Single cell from Tumor
1001000185.D10


title: GBM cell 947

description:
Single cell from Tumor
1001000185.C7


title: GBM cell 948

description:
Single cell from Tumor
1001000185.A5


title: GBM cell 944

description:
Single cell from Tumor
1001000185.C9


title: GBM cell 957

description:
Single cell from Tumor
1001000185.B9


title: GBM cell 954

description:
Single cell from Tumor
1001000185.E5


title: GBM cell 940

description:
Single cell from Tumor
1001000184.D8


title: GBM cell 941

description:
Single cell from Tumor
1001000184.E9


title: GBM cell 951

description:
Single cell from Tumor
1001000185.A11


title: GBM cell 943

description:
Single cell from Tumor
1001000185.F9


title: GBM cell 945

description:
Single cell from Tumor
1001000185.G6


title: GBM cell 942

description:
Single cell from Tumor
1001000184.G3


title: GBM cell 939

description:
Single cell from Tumor
1001000184.D11


title: GBM cell 938

description:
Single cell from Tumor
1001000184.E6


title: GBM cell 936

description:
Single cell from Tumor
1001000184.D2


title: GBM cell 937

description:
Single cell from Tumor
1001000184.C12


title: GBM cell 935

description:
Single cell from Tumor
1001000184.G2


title: GBM cell 955

description:
Single cell from Tumor
1001000185.F12


title: GBM cell 963

description:
Single cell from Tumor
1001000185.D2


title: GBM cell 934

description:
Single cell from Tumor
1001000184.F8


title: GBM cell 953

description:
Single cell from Tumor
1001000185.B12


title: GBM cell 931

description:
Single cell from Tumor
1001000184.C7


title: GBM cell 932

description:
Single cell from Tumor
1001000184.E4


title: GBM cell 929

description:
Single cell from Tumor
1001000184.E11


title: GBM cell 933

description:
Single cell from Tumor
1001000184.H7


title: GBM cell 930

description:
Single cell from Tumor
1001000184.F2


title: GBM cell 928

description:
Single cell from Tumor
1001000184.D4


title: GBM cell 927

description:
Single cell from Tumor
1001000184.C2


title: GBM cell 925

description:
Single cell from Tumor
1001000184.G9


title: GBM cell 921

description:
Single cell from Tumor
1001000184.G6


title: GBM cell 924

description:
Single cell from Tumor
1001000184.E10


title: GBM cell 926

description:
Single cell from Tumor
1001000184.C8


title: GBM cell 917

description:
Single cell from Tumor
1001000184.H11


title: GBM cell 918

description:
Single cell from Tumor
1001000184.H3


title: GBM cell 916

description:
Single cell from Tumor
1001000184.D12


title: GBM cell 919

description:
Single cell from Tumor
1001000184.F11


title: GBM cell 923

description:
Single cell from Tumor
1001000184.E1


title: GBM cell 922

description:
Single cell from Tumor
1001000184.F5


title: GBM cell 915

description:
Single cell from Tumor
1001000184.D6


title: GBM cell 914

description:
Single cell from Tumor
1001000184.E12


title: GBM cell 911

description:
Single cell from Tumor
1001000184.F7


title: GBM cell 913

description:
Single cell from Tumor
1001000184.G7


title: GBM cell 909

description:
Single cell from Tumor
1001000184.H1


title: GBM cell 910

description:
Single cell from Tumor
1001000184.C6


title: GBM cell 908

description:
Single cell from Tumor
1001000184.G4


title: GBM cell 912

description:
Single cell from Tumor
1001000184.G12


title: GBM cell 907

description:
Single cell from Tumor
1001000184.C10


title: GBM cell 904

description:
Single cell from Tumor
1001000184.H9


title: GBM cell 906

description:
Single cell from Tumor
1001000184.D1


title: GBM cell 905

description:
Single cell from Tumor
1001000184.H2


title: GBM cell 902

description:
Single cell from Tumor
1001000184.F1


title: GBM cell 903

description:
Single cell from Tumor
1001000184.F9


title: GBM cell 900

description:
Single cell from Tumor
1001000184.F12


title: GBM cell 899

description:
Single cell from Tumor
1001000184.H8


title: GBM cell 901

description:
Single cell from Tumor
1001000184.D3


title: GBM cell 920

description:
Single cell from Tumor
1001000184.H6


title: GBM cell 898

description:
Single cell from Tumor
1001000184.E5


title: GBM cell 897

description:
Single cell from Tumor
1001000184.F3


title: GBM cell 896

description:
Single cell from Tumor
1001000184.D10


title: GBM cell 892

description:
Single cell from Tumor
1001000184.C3


title: GBM cell 891

description:
Single cell from Tumor
1001000184.D5


title: GBM cell 884

description:
Single cell from Tumor
1001000184.D7


title: GBM cell 894

description:
Single cell from Tumor
1001000184.H5


title: GBM cell 890

description:
Single cell from Tumor
1001000184.E3


title: GBM cell 885

description:
Single cell from Tumor
1001000184.G5


title: GBM cell 880

description:
Single cell from Tumor
1001000184.D9


title: GBM cell 893

description:
Single cell from Tumor
1001000184.H10


title: GBM cell 886

description:
Single cell from Tumor
1001000184.C5


title: GBM cell 883

description:
Single cell from Tumor
1001000184.C11


title: GBM cell 895

description:
Single cell from Tumor
1001000184.E8


title: GBM cell 882

description:
Single cell from Tumor
1001000184.F6


title: GBM cell 881

description:
Single cell from Tumor
1001000184.G11


title: GBM cell 879

description:
Single cell from Tumor
1001000184.A3


title: GBM cell 876

description:
Single cell from Tumor
1001000184.A7


title: GBM cell 870

description:
Single cell from Tumor
1001000184.A10


title: GBM cell 877

description:
Single cell from Tumor
1001000184.B5


title: GBM cell 868

description:
Single cell from Tumor
1001000184.A8


title: GBM cell 878

description:
Single cell from Tumor
1001000184.A2


title: GBM cell 875

description:
Single cell from Tumor
1001000184.B4


title: GBM cell 872

description:
Single cell from Tumor
1001000184.A9


title: GBM cell 873

description:
Single cell from Tumor
1001000184.B11


title: GBM cell 874

description:
Single cell from Tumor
1001000184.A5


title: GBM cell 869

description:
Single cell from Tumor
1001000184.B10


title: GBM cell 867

description:
Single cell from Tumor
1001000184.A4


title: GBM cell 888

description:
Single cell from Tumor
1001000184.E2


title: GBM cell 889

description:
Single cell from Tumor
1001000184.F10


title: GBM cell 887

description:
Single cell from Tumor
1001000184.H4


title: GBM cell 866

description:
Single cell from Tumor
1001000184.B6


title: GBM cell 865

description:
Single cell from Tumor
1001000184.A6


title: GBM cell 863

description:
Single cell from Tumor
1001000184.B3


title: GBM cell 861

description:
Single cell from Tumor
1001000184.B2


title: GBM cell 859

description:
Single cell from Tumor
1001000184.B8


title: GBM cell 862

description:
Single cell from Tumor
1001000184.B9


title: GBM cell 860

description:
Single cell from Tumor
1001000184.A11


title: GBM cell 858

description:
Single cell from Tumor
1001000184.A1


title: GBM cell 864

description:
Single cell from Tumor
1001000184.C1


title: GBM cell 857

description:
Single cell from Tumor
1001000183.C3


title: GBM cell 856

description:
Single cell from Tumor
1001000183.D12


title: GBM cell 871

description:
Single cell from Tumor
1001000184.B7


title: GBM cell 855

description:
Single cell from Tumor
1001000183.A11


title: GBM cell 852

description:
Single cell from Tumor
1001000183.A2


title: GBM cell 854

description:
Single cell from Tumor
1001000183.G5


title: GBM cell 851

description:
Single cell from Tumor
1001000183.B5


title: GBM cell 849

description:
Single cell from Tumor
1001000183.F7


title: GBM cell 850

description:
Single cell from Tumor
1001000183.D6


title: GBM cell 846

description:
Single cell from Tumor
1001000183.H1


title: GBM cell 842

description:
Single cell from Tumor
1001000183.A4


title: GBM cell 843

description:
Single cell from Tumor
1001000183.C10


title: GBM cell 848

description:
Single cell from Tumor
1001000183.B10


title: GBM cell 845

description:
Single cell from Tumor
1001000183.B3


title: GBM cell 847

description:
Single cell from Tumor
1001000183.D1


title: GBM cell 840

description:
Single cell from Tumor
1001000183.F2


title: GBM cell 839

description:
Single cell from Tumor
1001000183.G7


title: GBM cell 844

description:
Single cell from Tumor
1001000183.E5


title: GBM cell 838

description:
Single cell from Tumor
1001000183.B2


title: GBM cell 837

description:
Single cell from Tumor
1001000183.E7


title: GBM cell 841

description:
Single cell from Tumor
1001000183.E11


title: GBM cell 831

description:
Single cell from Tumor
1001000183.F12


title: GBM cell 833

description:
Single cell from Tumor
1001000183.D7


title: GBM cell 832

description:
Single cell from Tumor
1001000183.D9


title: GBM cell 835

description:
Single cell from Tumor
1001000183.H5


title: GBM cell 829

description:
Single cell from Tumor
1001000183.C12


title: GBM cell 828

description:
Single cell from Tumor
1001000183.A1


title: GBM cell 827

description:
Single cell from Tumor
1001000183.D10


title: GBM cell 825

description:
Single cell from Tumor
1001000183.H7


title: GBM cell 834

description:
Single cell from Tumor
1001000183.C7


title: GBM cell 853

description:
Single cell from Tumor
1001000183.E2


title: GBM cell 830

description:
Single cell from Tumor
1001000183.F3


title: GBM cell 2188

description:
Single cell from Tumor
1001000237.G7


title: GBM cell 2187

description:
Single cell from Tumor
1001000237.B2


title: GBM cell 826

description:
Single cell from Tumor
1001000183.B7


title: GBM cell 2186

description:
Single cell from Tumor
1001000237.F11


title: GBM cell 2185

description:
Single cell from Tumor
1001000237.F7


title: GBM cell 2181

description:
Single cell from Tumor
1001000237.C5


title: GBM cell 2182

description:
Single cell from Tumor
1001000237.F5


title: GBM cell 2180

description:
Single cell from Tumor
1001000237.D8


title: GBM cell 2175

description:
Single cell from Tumor
1001000237.G3


title: GBM cell 2173

description:
Single cell from Tumor
1001000237.D2


title: GBM cell 2177

description:
Single cell from Tumor
1001000237.A6


title: GBM cell 2184

description:
Single cell from Tumor
1001000237.G9


title: GBM cell 2174

description:
Single cell from Tumor
1001000237.B6


title: GBM cell 2176

description:
Single cell from Tumor
1001000237.C6


title: GBM cell 2183

description:
Single cell from Tumor
1001000237.B4


title: GBM cell 2179

description:
Single cell from Tumor
1001000237.G5


title: GBM cell 2178

description:
Single cell from Tumor
1001000237.F4


title: GBM cell 836

description:
Single cell from Tumor
1001000183.E10


title: GBM cell 2170

description:
Single cell from Tumor
1001000237.C3


title: GBM cell 2168

description:
Single cell from Tumor
1001000237.A11


title: GBM cell 2171

description:
Single cell from Tumor
1001000237.B12


title: GBM cell 2163

description:
Single cell from Tumor
1001000237.H8


title: GBM cell 2164

description:
Single cell from Tumor
1001000237.D4


title: GBM cell 2167

description:
Single cell from Tumor
1001000237.B8


title: GBM cell 2162

description:
Single cell from Tumor
1001000237.B10


title: GBM cell 2165

description:
Single cell from Tumor
1001000237.C1


title: GBM cell 2158

description:
Single cell from Tumor
1001000237.C2


title: GBM cell 2161

description:
Single cell from Tumor
1001000237.E4


title: GBM cell 2156

description:
Single cell from Tumor
1001000237.D9


title: GBM cell 2159

description:
Single cell from Tumor
1001000237.A2


title: GBM cell 2155

description:
Single cell from Tumor
1001000237.E12


title: GBM cell 2153

description:
Single cell from Tumor
1001000237.F1


title: GBM cell 2157

description:
Single cell from Tumor
1001000237.G8


title: GBM cell 2154

description:
Single cell from Tumor
1001000237.H5


title: GBM cell 2172

description:
Single cell from Tumor
1001000237.E2


title: GBM cell 2160

description:
Single cell from Tumor
1001000237.E6


title: GBM cell 2151

description:
Single cell from Tumor
1001000237.F8


title: GBM cell 2150

description:
Single cell from Tumor
1001000237.A4


title: GBM cell 2148

description:
Single cell from Tumor
1001000237.C8


title: GBM cell 2146

description:
Single cell from Tumor
1001000237.F6


title: GBM cell 2149

description:
Single cell from Tumor
1001000237.G11


title: GBM cell 2147

description:
Single cell from Tumor
1001000237.E8


title: GBM cell 2145

description:
Single cell from Tumor
1001000237.C12


title: GBM cell 2166

description:
Single cell from Tumor
1001000237.F9


title: GBM cell 2169

description:
Single cell from Tumor
1001000237.D6


title: GBM cell 2152

description:
Single cell from Tumor
1001000237.F10


title: GBM cell 2142

description:
Single cell from Tumor
1001000237.H1


title: GBM cell 2144

description:
Single cell from Tumor
1001000237.D7


title: GBM cell 2141

description:
Single cell from Tumor
1001000237.H3


title: GBM cell 2140

description:
Single cell from Tumor
1001000237.D12


title: GBM cell 2143

description:
Single cell from Tumor
1001000237.G6


title: GBM cell 2138

description:
Single cell from Tumor
1001000237.H11


title: GBM cell 2135

description:
Single cell from Tumor
1001000237.F12


title: GBM cell 2136

description:
Single cell from Tumor
1001000237.A9


title: GBM cell 2132

description:
Single cell from Tumor
1001000237.G4


title: GBM cell 2133

description:
Single cell from Tumor
1001000237.G10


title: GBM cell 2131

description:
Single cell from Tumor
1001000237.D5


title: GBM cell 2134

description:
Single cell from Tumor
1001000237.A10


title: GBM cell 2129

description:
Single cell from Tumor
1001000237.D1


title: GBM cell 2126

description:
Single cell from Tumor
1001000237.D10


title: GBM cell 2127

description:
Single cell from Tumor
1001000237.H7


title: GBM cell 2124

description:
Single cell from Tumor
1001000237.B1


title: GBM cell 2123

description:
Single cell from Tumor
1001000237.A12


title: GBM cell 2128

description:
Single cell from Tumor
1001000237.E1


title: GBM cell 2122

description:
Single cell from Tumor
1001000237.C10


title: GBM cell 2120

description:
Single cell from Tumor
1001000237.B5


title: GBM cell 2119

description:
Single cell from Tumor
1001000237.C9


title: GBM cell 2118

description:
Single cell from Tumor
1001000237.G2


title: GBM cell 2117

description:
Single cell from Tumor
1001000237.D3


title: GBM cell 2137

description:
Single cell from Tumor
1001000237.A7


title: GBM cell 2116

description:
Single cell from Tumor
1001000237.G12


title: GBM cell 2139

description:
Single cell from Tumor
1001000237.E10


title: GBM cell 2112

description:
Single cell from Tumor
1001000237.C4


title: GBM cell 2115

description:
Single cell from Tumor
1001000237.B11


title: GBM cell 2113

description:
Single cell from Tumor
1001000237.A3


title: GBM cell 2111

description:
Single cell from Tumor
1001000237.E5


title: GBM cell 2114

description:
Single cell from Tumor
1001000237.E3


title: GBM cell 2108

description:
Single cell from Tumor
1001000236.F11


title: GBM cell 2110

description:
Single cell from Tumor
1001000236.A5


title: GBM cell 2130

description:
Single cell from Tumor
1001000237.B3


title: GBM cell 2106

description:
Single cell from Tumor
1001000236.B10


title: GBM cell 2107

description:
Single cell from Tumor
1001000236.G2


title: GBM cell 2104

description:
Single cell from Tumor
1001000236.D8


title: GBM cell 2125

description:
Single cell from Tumor
1001000237.F3


title: GBM cell 2121

description:
Single cell from Tumor
1001000237.A5


title: GBM cell 2105

description:
Single cell from Tumor
1001000236.G10


title: GBM cell 2103

description:
Single cell from Tumor
1001000236.D1


title: GBM cell 2101

description:
Single cell from Tumor
1001000236.H6


title: GBM cell 2100

description:
Single cell from Tumor
1001000236.A11


title: GBM cell 2098

description:
Single cell from Tumor
1001000236.E5


title: GBM cell 2099

description:
Single cell from Tumor
1001000236.G1


title: GBM cell 2094

description:
Single cell from Tumor
1001000236.G4


title: GBM cell 2096

description:
Single cell from Tumor
1001000236.G12


title: GBM cell 2093

description:
Single cell from Tumor
1001000236.C5


title: GBM cell 2097

description:
Single cell from Tumor
1001000236.G6


title: GBM cell 2109

description:
Single cell from Tumor
1001000236.B5


title: GBM cell 2092

description:
Single cell from Tumor
1001000236.C11


title: GBM cell 2091

description:
Single cell from Tumor
1001000236.G8


title: GBM cell 2090

description:
Single cell from Tumor
1001000236.F1


title: GBM cell 2089

description:
Single cell from Tumor
1001000236.E7


title: GBM cell 2088

description:
Single cell from Tumor
1001000236.C9


title: GBM cell 2086

description:
Single cell from Tumor
1001000236.H8


title: GBM cell 2087

description:
Single cell from Tumor
1001000236.D6


title: GBM cell 2084

description:
Single cell from Tumor
1001000236.A8


title: GBM cell 2083

description:
Single cell from Tumor
1001000236.C2


title: GBM cell 2080

description:
Single cell from Tumor
1001000236.A1


title: GBM cell 2082

description:
Single cell from Tumor
1001000236.E4


title: GBM cell 2081

description:
Single cell from Tumor
1001000236.F7


title: GBM cell 2102

description:
Single cell from Tumor
1001000236.H10


title: GBM cell 2077

description:
Single cell from Tumor
1001000236.D4


title: GBM cell 2078

description:
Single cell from Tumor
1001000236.E9


title: GBM cell 2076

description:
Single cell from Tumor
1001000236.F3


title: GBM cell 2079

description:
Single cell from Tumor
1001000236.B12


title: GBM cell 2074

description:
Single cell from Tumor
1001000236.C7


title: GBM cell 2095

description:
Single cell from Tumor
1001000236.B7


title: GBM cell 2071

description:
Single cell from Tumor
1001000236.H5


title: GBM cell 2073

description:
Single cell from Tumor
1001000236.A3


title: GBM cell 2072

description:
Single cell from Tumor
1001000236.A12


title: GBM cell 2069

description:
Single cell from Tumor
1001000236.C12


title: GBM cell 2066

description:
Single cell from Tumor
1001000236.D12


title: GBM cell 2068

description:
Single cell from Tumor
1001000236.F5


title: GBM cell 2065

description:
Single cell from Tumor
1001000236.C10


title: GBM cell 2085

description:
Single cell from Tumor
1001000236.H2


title: GBM cell 2064

description:
Single cell from Tumor
1001000236.F9


title: GBM cell 2063

description:
Single cell from Tumor
1001000236.E8


title: GBM cell 2062

description:
Single cell from Tumor
1001000236.G7


title: GBM cell 2060

description:
Single cell from Tumor
1001000236.G3


title: GBM cell 2061

description:
Single cell from Tumor
1001000236.F2


title: GBM cell 2058

description:
Single cell from Tumor
1001000236.B6


title: GBM cell 2059

description:
Single cell from Tumor
1001000236.B11


title: GBM cell 2055

description:
Single cell from Tumor
1001000236.G11


title: GBM cell 2075

description:
Single cell from Tumor
1001000236.B8


title: GBM cell 2053

description:
Single cell from Tumor
1001000236.D2


title: GBM cell 2056

description:
Single cell from Tumor
1001000236.D9


title: GBM cell 2070

description:
Single cell from Tumor
1001000236.B3


title: GBM cell 2051

description:
Single cell from Tumor
1001000236.G9


title: GBM cell 2050

description:
Single cell from Tumor
1001000236.D10


title: GBM cell 2049

description:
Single cell from Tumor
1001000236.A6


title: GBM cell 2048

description:
Single cell from Tumor
1001000236.H7


title: GBM cell 2054

description:
Single cell from Tumor
1001000236.A10


title: GBM cell 2052

description:
Single cell from Tumor
1001000236.E6


title: GBM cell 2046

description:
Single cell from Tumor
1001000236.B1


title: GBM cell 2045

description:
Single cell from Tumor
1001000236.C4


title: GBM cell 2047

description:
Single cell from Tumor
1001000236.G5


title: GBM cell 2038

description:
Single cell from Tumor
1001000236.B9


title: GBM cell 2039

description:
Single cell from Tumor
1001000236.H1


title: GBM cell 2040

description:
Single cell from Tumor
1001000236.C8


title: GBM cell 2067

description:
Single cell from Tumor
1001000236.D11


title: GBM cell 2041

description:
Single cell from Tumor
1001000236.F6


title: GBM cell 2044

description:
Single cell from Tumor
1001000236.C3


title: GBM cell 2042

description:
Single cell from Tumor
1001000236.E3


title: GBM cell 2043

description:
Single cell from Tumor
1001000236.A7


title: GBM cell 2036

description:
Single cell from Tumor
1001000236.D7


title: GBM cell 2057

description:
Single cell from Tumor
1001000236.F10


title: GBM cell 2035

description:
Single cell from Tumor
1001000236.B2


title: GBM cell 2037

description:
Single cell from Tumor
1001000236.C1


title: GBM cell 2033

description:
Single cell from Tumor
1001000236.E10


title: GBM cell 2031

description:
Single cell from Tumor
1001000236.D3


title: GBM cell 2030

description:
Single cell from Tumor
1001000236.H11


title: GBM cell 2029

description:
Single cell from Tumor
1001000236.A9


title: GBM cell 2026

description:
Single cell from Tumor
1001000236.A4


title: GBM cell 2025

description:
Single cell from Tumor
1001000236.C6


title: GBM cell 2028

description:
Single cell from Tumor
1001000236.E1


title: GBM cell 2022

description:
Single cell from Tumor
1001000236.H3


title: GBM cell 2023

description:
Single cell from Tumor
1001000236.B4


title: GBM cell 2021

description:
Single cell from Tumor
1001000236.E12


title: GBM cell 2020

description:
Single cell from Tumor
1001000235.D2


title: GBM cell 2019

description:
Single cell from Tumor
1001000235.A4


title: GBM cell 2018

description:
Single cell from Tumor
1001000235.G9


title: GBM cell 2034

description:
Single cell from Tumor
1001000236.F4


title: GBM cell 2013

description:
Single cell from Tumor
1001000235.D12


title: GBM cell 2017

description:
Single cell from Tumor
1001000235.C5


title: GBM cell 2032

description:
Single cell from Tumor
1001000236.A2


title: GBM cell 2016

description:
Single cell from Tumor
1001000235.D7


title: GBM cell 2014

description:
Single cell from Tumor
1001000235.H7


title: GBM cell 2011

description:
Single cell from Tumor
1001000235.H2


title: GBM cell 2010

description:
Single cell from Tumor
1001000235.E9


title: GBM cell 2007

description:
Single cell from Tumor
1001000235.C11


title: GBM cell 2009

description:
Single cell from Tumor
1001000235.B4


title: GBM cell 2012

description:
Single cell from Tumor
1001000235.E7


title: GBM cell 2015

description:
Single cell from Tumor
1001000235.F9


title: GBM cell 2006

description:
Single cell from Tumor
1001000235.B1


title: GBM cell 2005

description:
Single cell from Tumor
1001000235.F11


title: GBM cell 2008

description:
Single cell from Tumor
1001000235.A6


title: GBM cell 2003

description:
Single cell from Tumor
1001000235.C3


title: GBM cell 2027

description:
Single cell from Tumor
1001000236.D5


title: GBM cell 2024

description:
Single cell from Tumor
1001000236.H4


title: GBM cell 2004

description:
Single cell from Tumor
1001000235.G10


title: GBM cell 1998

description:
Single cell from Tumor
1001000235.H10


title: GBM cell 1999

description:
Single cell from Tumor
1001000235.H4


title: GBM cell 2001

description:
Single cell from Tumor
1001000235.D10


title: GBM cell 1996

description:
Single cell from Tumor
1001000235.H9


title: GBM cell 2000

description:
Single cell from Tumor
1001000235.E1


title: GBM cell 1995

description:
Single cell from Tumor
1001000235.H6


title: GBM cell 1997

description:
Single cell from Tumor
1001000235.D5


title: GBM cell 1993

description:
Single cell from Tumor
1001000235.A12


title: GBM cell 1994

description:
Single cell from Tumor
1001000235.B12


title: GBM cell 1992

description:
Single cell from Tumor
1001000235.C4


title: GBM cell 1991

description:
Single cell from Tumor
1001000235.F1


title: GBM cell 1990

description:
Single cell from Tumor
1001000235.D3


title: GBM cell 1987

description:
Single cell from Tumor
1001000235.G7


title: GBM cell 1985

description:
Single cell from Tumor
1001000235.E11


title: GBM cell 1979

description:
Single cell from Tumor
1001000235.A1


title: GBM cell 1989

description:
Single cell from Tumor
1001000235.C9


title: GBM cell 1988

description:
Single cell from Tumor
1001000235.F5


title: GBM cell 1978

description:
Single cell from Tumor
1001000235.G3


title: GBM cell 1984

description:
Single cell from Tumor
1001000235.A10


title: GBM cell 1983

description:
Single cell from Tumor
1001000235.C7


title: GBM cell 1982

description:
Single cell from Tumor
1001000235.E10


title: GBM cell 2002

description:
Single cell from Tumor
1001000235.F7


title: GBM cell 1980

description:
Single cell from Tumor
1001000235.B6


title: GBM cell 1975

description:
Single cell from Tumor
1001000235.E8


title: GBM cell 1974

description:
Single cell from Tumor
1001000235.B9


title: GBM cell 1986

description:
Single cell from Tumor
1001000235.G1


title: GBM cell 1973

description:
Single cell from Tumor
1001000235.H3


title: GBM cell 1977

description:
Single cell from Tumor
1001000235.H1


title: GBM cell 1972

description:
Single cell from Tumor
1001000235.D8


title: GBM cell 1970

description:
Single cell from Tumor
1001000235.C10


title: GBM cell 1971

description:
Single cell from Tumor
1001000235.B2


title: GBM cell 1968

description:
Single cell from Tumor
1001000235.G12


title: GBM cell 1966

description:
Single cell from Tumor
1001000235.A3


title: GBM cell 1969

description:
Single cell from Tumor
1001000235.D1


title: GBM cell 1967

description:
Single cell from Tumor
1001000235.H8


title: GBM cell 1965

description:
Single cell from Tumor
1001000235.C8


title: GBM cell 1964

description:
Single cell from Tumor
1001000235.E12


title: GBM cell 1963

description:
Single cell from Tumor
1001000235.D11


title: GBM cell 1981

description:
Single cell from Tumor
1001000235.F3


title: GBM cell 1959

description:
Single cell from Tumor
1001000235.B7


title: GBM cell 1962

description:
Single cell from Tumor
1001000235.H11


title: GBM cell 1960

description:
Single cell from Tumor
1001000235.F12


title: GBM cell 1961

description:
Single cell from Tumor
1001000235.G6


title: GBM cell 1976

description:
Single cell from Tumor
1001000235.F10


title: GBM cell 1957

description:
Single cell from Tumor
1001000235.A5


title: GBM cell 1956

description:
Single cell from Tumor
1001000235.G11


title: GBM cell 1955

description:
Single cell from Tumor
1001000235.F8


title: GBM cell 1958

description:
Single cell from Tumor
1001000235.B11


title: GBM cell 1954

description:
Single cell from Tumor
1001000235.E6


title: GBM cell 1953

description:
Single cell from Tumor
1001000235.B10


title: GBM cell 1951

description:
Single cell from Tumor
1001000235.A2


title: GBM cell 1949

description:
Single cell from Tumor
1001000235.B8


title: GBM cell 1948

description:
Single cell from Tumor
1001000235.F2


title: GBM cell 1947

description:
Single cell from Tumor
1001000235.D6


title: GBM cell 1950

description:
Single cell from Tumor
1001000235.F6


title: GBM cell 1946

description:
Single cell from Tumor
1001000235.C12


title: GBM cell 1945

description:
Single cell from Tumor
1001000235.D9


title: GBM cell 1944

description:
Single cell from Tumor
1001000235.B3


title: GBM cell 1942

description:
Single cell from Tumor
1001000235.G8


title: GBM cell 1941

description:
Single cell from Tumor
1001000235.A11


title: GBM cell 1943

description:
Single cell from Tumor
1001000235.G2


title: GBM cell 1940

description:
Single cell from Tumor
1001000235.D4


title: GBM cell 1938

description:
Single cell from Tumor
1001000235.A9


title: GBM cell 1939

description:
Single cell from Tumor
1001000235.F4


title: GBM cell 1937

description:
Single cell from Tumor
1001000235.C1


title: GBM cell 1936

description:
Single cell from Tumor
1001000235.G4


title: GBM cell 1934

description:
Single cell from Periphery
1001000234.C3

value: Unpanned


title: GBM cell 1933

description:
Single cell from Periphery
1001000234.E10


title: GBM cell 1931

description:
Single cell from Periphery
1001000233.C4


title: GBM cell 1929

description:
Single cell from Periphery
1001000233.D10


title: GBM cell 1932

description:
Single cell from Periphery
1001000233.G11


title: GBM cell 1952

description:
Single cell from Tumor
1001000235.B5


title: GBM cell 1928

description:
Single cell from Periphery
1001000233.A6


title: GBM cell 1926

description:
Single cell from Periphery
1001000232.B3


title: GBM cell 1927

description:
Single cell from Periphery
1001000233.H10


title: GBM cell 1923

description:
Single cell from Tumor
1001000231.H1


title: GBM cell 1930

description:
Single cell from Periphery
1001000233.C6


title: GBM cell 1921

description:
Single cell from Tumor
1001000231.D2


title: GBM cell 1922

description:
Single cell from Tumor
1001000231.C7


title: GBM cell 1918

description:
Single cell from Tumor
1001000231.G4


title: GBM cell 1920

description:
Single cell from Tumor
1001000231.F11


title: GBM cell 1925

description:
Single cell from Periphery
1001000232.G3


title: GBM cell 1915

description:
Single cell from Tumor
1001000231.A5


title: GBM cell 1917

description:
Single cell from Tumor
1001000231.B6


title: GBM cell 1913

description:
Single cell from Tumor
1001000231.A10


title: GBM cell 1916

description:
Single cell from Tumor
1001000231.E5


title: GBM cell 1935

description:
Single cell from Periphery
1001000234.C9


title: GBM cell 1911

description:
Single cell from Tumor
1001000231.D4


title: GBM cell 1912

description:
Single cell from Tumor
1001000231.H4


title: GBM cell 1908

description:
Single cell from Tumor
1001000231.F3


title: GBM cell 1907

description:
Single cell from Tumor
1001000231.G2


title: GBM cell 1909

description:
Single cell from Tumor
1001000231.A12


title: GBM cell 1910

description:
Single cell from Tumor
1001000231.G11


title: GBM cell 1906

description:
Single cell from Tumor
1001000231.B8


title: GBM cell 1924

description:
Single cell from Periphery
1001000232.E4


title: GBM cell 1914

description:
Single cell from Tumor
1001000231.D11


title: GBM cell 1905

description:
Single cell from Tumor
1001000231.E11


title: GBM cell 1903

description:
Single cell from Tumor
1001000231.B10


title: GBM cell 1904

description:
Single cell from Tumor
1001000231.C9


title: GBM cell 1919

description:
Single cell from Tumor
1001000231.A8


title: GBM cell 1902

description:
Single cell from Tumor
1001000231.H2


title: GBM cell 1901

description:
Single cell from Tumor
1001000231.E3


title: GBM cell 1898

description:
Single cell from Tumor
1001000231.G6


title: GBM cell 1899

description:
Single cell from Tumor
1001000231.A1


title: GBM cell 1897

description:
Single cell from Tumor
1001000231.H10


title: GBM cell 1892

description:
Single cell from Tumor
1001000231.C10


title: GBM cell 1895

description:
Single cell from Tumor
1001000231.E2


title: GBM cell 1896

description:
Single cell from Tumor
1001000231.B2


title: GBM cell 1894

description:
Single cell from Tumor
1001000231.D6


title: GBM cell 1893

description:
Single cell from Tumor
1001000231.B12


title: GBM cell 1890

description:
Single cell from Tumor
1001000231.H9


title: GBM cell 1891

description:
Single cell from Tumor
1001000231.C5


title: GBM cell 1887

description:
Single cell from Tumor
1001000231.E10


title: GBM cell 1888

description:
Single cell from Tumor
1001000231.E8


title: GBM cell 1886

description:
Single cell from Tumor
1001000231.G3


title: GBM cell 1889

description:
Single cell from Tumor
1001000231.D5


title: GBM cell 1883

description:
Single cell from Tumor
1001000231.A2


title: GBM cell 1882

description:
Single cell from Tumor
1001000231.A7


title: GBM cell 1881

description:
Single cell from Tumor
1001000231.D8


title: GBM cell 1880

description:
Single cell from Tumor
1001000231.H7


title: GBM cell 1879

description:
Single cell from Tumor
1001000231.B1


title: GBM cell 1900

description:
Single cell from Tumor
1001000231.C3


title: GBM cell 1878

description:
Single cell from Tumor
1001000231.F7


title: GBM cell 1877

description:
Single cell from Tumor
1001000231.C6


title: GBM cell 1876

description:
Single cell from Tumor
1001000231.E12


title: GBM cell 1875

description:
Single cell from Tumor
1001000231.G1


title: GBM cell 1874

description:
Single cell from Tumor
1001000231.E6


title: GBM cell 1873

description:
Single cell from Tumor
1001000231.A4


title: GBM cell 1872

description:
Single cell from Tumor
1001000231.C11


title: GBM cell 1870

description:
Single cell from Tumor
1001000231.C8


title: GBM cell 1871

description:
Single cell from Tumor
1001000231.D12


title: GBM cell 1867

description:
Single cell from Tumor
1001000231.A9


title: GBM cell 1866

description:
Single cell from Tumor
1001000231.G10


title: GBM cell 1865

description:
Single cell from Tumor
1001000231.D10


title: GBM cell 1868

description:
Single cell from Tumor
1001000231.F12


title: GBM cell 1869

description:
Single cell from Tumor
1001000231.F2


title: GBM cell 1864

description:
Single cell from Tumor
1001000231.D9


title: GBM cell 1885

description:
Single cell from Tumor
1001000231.E1


title: GBM cell 1863

description:
Single cell from Tumor
1001000231.B7


title: GBM cell 1862

description:
Single cell from Tumor
1001000231.C2


title: GBM cell 1861

description:
Single cell from Tumor
1001000231.C1


title: GBM cell 1860

description:
Single cell from Tumor
1001000231.H5


title: GBM cell 1859

description:
Single cell from Tumor
1001000231.G8


title: GBM cell 1858

description:
Single cell from Tumor
1001000231.G5


title: GBM cell 1856

description:
Single cell from Tumor
1001000231.G12


title: GBM cell 1857

description:
Single cell from Tumor
1001000231.F4


title: GBM cell 1854

description:
Single cell from Tumor
1001000231.D3


title: GBM cell 1855

description:
Single cell from Tumor
1001000231.B9


title: GBM cell 1851

description:
Single cell from Tumor
1001000231.H3


title: GBM cell 1850

description:
Single cell from Tumor
1001000231.B3


title: GBM cell 1849

description:
Single cell from Tumor
1001000231.G9


title: GBM cell 1847

description:
Single cell from Tumor
1001000231.H6


title: GBM cell 1846

description:
Single cell from Tumor
1001000231.F6


title: GBM cell 1852

description:
Single cell from Tumor
1001000231.H8


title: GBM cell 1844

description:
Single cell from Tumor
1001000231.E7


title: GBM cell 1845

description:
Single cell from Tumor
1001000231.D7


title: GBM cell 1843

description:
Single cell from Tumor
1001000231.B5


title: GBM cell 1841

description:
Single cell from Tumor
1001000231.A6


title: GBM cell 1842

description:
Single cell from Tumor
1001000231.A11


title: GBM cell 1839

description:
Single cell from Tumor
1001000231.G7


title: GBM cell 1836

description:
Single cell from Tumor
1001000231.A3


title: GBM cell 1835

description:
Single cell from Tumor
1001000231.F8


title: GBM cell 1834

description:
Single cell from Tumor
1001000230.D5


title: GBM cell 1840

description:
Single cell from Tumor
1001000231.F10


title: GBM cell 1838

description:
Single cell from Tumor
1001000231.H11


title: GBM cell 1833

description:
Single cell from Tumor
1001000230.H2


title: GBM cell 1831

description:
Single cell from Tumor
1001000230.H9


title: GBM cell 1829

description:
Single cell from Tumor
1001000230.F3


title: GBM cell 1830

description:
Single cell from Tumor
1001000230.G1


title: GBM cell 1853

description:
Single cell from Tumor
1001000231.C4


title: GBM cell 1827

description:
Single cell from Tumor
1001000230.E3


title: GBM cell 1826

description:
Single cell from Tumor
1001000230.A8


title: GBM cell 1828

description:
Single cell from Tumor
1001000230.A10


title: GBM cell 1825

description:
Single cell from Tumor
1001000230.C3


title: GBM cell 1884

description:
Single cell from Tumor
1001000231.B4


title: GBM cell 1848

description:
Single cell from Tumor
1001000231.B11


title: GBM cell 1824

description:
Single cell from Tumor
1001000230.C12


title: GBM cell 1823

description:
Single cell from Tumor
1001000230.H7


title: GBM cell 1822

description:
Single cell from Tumor
1001000230.F10


title: GBM cell 1820

description:
Single cell from Tumor
1001000230.F1


title: GBM cell 1821

description:
Single cell from Tumor
1001000230.G8


title: GBM cell 1818

description:
Single cell from Tumor
1001000230.D11


title: GBM cell 1819

description:
Single cell from Tumor
1001000230.B2


title: GBM cell 1837

description:
Single cell from Tumor
1001000231.F1


title: GBM cell 1817

description:
Single cell from Tumor
1001000230.G11


title: GBM cell 1816

description:
Single cell from Tumor
1001000230.C5


title: GBM cell 1815

description:
Single cell from Tumor
1001000230.C1


title: GBM cell 1813

description:
Single cell from Tumor
1001000230.E7


title: GBM cell 1814

description:
Single cell from Tumor
1001000230.C11


title: GBM cell 1812

description:
Single cell from Tumor
1001000230.H10


title: GBM cell 1810

description:
Single cell from Tumor
1001000230.G6


title: GBM cell 1811

description:
Single cell from Tumor
1001000230.H6


title: GBM cell 1808

description:
Single cell from Tumor
1001000230.E10


title: GBM cell 1809

description:
Single cell from Tumor
1001000230.C7


title: GBM cell 1803

description:
Single cell from Tumor
1001000230.D3


title: GBM cell 1805

description:
Single cell from Tumor
1001000230.G12


title: GBM cell 1798

description:
Single cell from Tumor
1001000230.G4


title: GBM cell 1800

description:
Single cell from Tumor
1001000230.H4


title: GBM cell 1804

description:
Single cell from Tumor
1001000230.B1


title: GBM cell 1799

description:
Single cell from Tumor
1001000230.B8


title: GBM cell 1795

description:
Single cell from Tumor
1001000230.D8


title: GBM cell 1797

description:
Single cell from Tumor
1001000230.B11


title: GBM cell 1796

description:
Single cell from Tumor
1001000230.F5


title: GBM cell 1792

description:
Single cell from Tumor
1001000230.A5


title: GBM cell 1791

description:
Single cell from Tumor
1001000230.G2


title: GBM cell 1790

description:
Single cell from Tumor
1001000230.G10


title: GBM cell 1793

description:
Single cell from Tumor
1001000230.H11


title: GBM cell 1788

description:
Single cell from Tumor
1001000230.E2


title: GBM cell 1789

description:
Single cell from Tumor
1001000230.D12


title: GBM cell 1832

description:
Single cell from Tumor
1001000230.F12


title: GBM cell 1807

description:
Single cell from Tumor
1001000230.A3


title: GBM cell 1806

description:
Single cell from Tumor
1001000230.F7


title: GBM cell 1786

description:
Single cell from Tumor
1001000230.C4


title: GBM cell 1787

description:
Single cell from Tumor
1001000230.A7


title: GBM cell 1783

description:
Single cell from Tumor
1001000230.G9


title: GBM cell 1785

description:
Single cell from Tumor
1001000230.H8


title: GBM cell 1802

description:
Single cell from Tumor
1001000230.E5


title: GBM cell 1779

description:
Single cell from Tumor
1001000230.H1


title: GBM cell 1781

description:
Single cell from Tumor
1001000230.F2


title: GBM cell 1784

description:
Single cell from Tumor
1001000230.D6


title: GBM cell 1777

description:
Single cell from Tumor
1001000230.B7


title: GBM cell 1774

description:
Single cell from Tumor
1001000230.C2


title: GBM cell 1776

description:
Single cell from Tumor
1001000230.B10


title: GBM cell 1794

description:
Single cell from Tumor
1001000230.C9


title: GBM cell 1770

description:
Single cell from Tumor
1001000230.E12


title: GBM cell 1780

description:
Single cell from Tumor
1001000230.A2


title: GBM cell 1772

description:
Single cell from Tumor
1001000230.G7


title: GBM cell 1778

description:
Single cell from Tumor
1001000230.F11


title: GBM cell 1801

description:
Single cell from Tumor
1001000230.E9


title: GBM cell 1771

description:
Single cell from Tumor
1001000230.B9


title: GBM cell 1769

description:
Single cell from Tumor
1001000230.F9


title: GBM cell 1763

description:
Single cell from Tumor
1001000230.B3


title: GBM cell 1764

description:
Single cell from Tumor
1001000230.B5


title: GBM cell 1767

description:
Single cell from Tumor
1001000230.G5


title: GBM cell 1761

description:
Single cell from Tumor
1001000230.C8


title: GBM cell 1759

description:
Single cell from Tumor
1001000230.C10


title: GBM cell 1762

description:
Single cell from Tumor
1001000230.H5


title: GBM cell 1757

description:
Single cell from Tumor
1001000230.E8


title: GBM cell 1768

description:
Single cell from Tumor
1001000230.A11


title: GBM cell 1765

description:
Single cell from Tumor
1001000230.F8


title: GBM cell 1760

description:
Single cell from Tumor
1001000230.E4


title: GBM cell 1782

description:
Single cell from Tumor
1001000230.D9


title: GBM cell 1756

description:
Single cell from Tumor
1001000230.E11


title: GBM cell 1775

description:
Single cell from Tumor
1001000230.A4


title: GBM cell 1773

description:
Single cell from Tumor
1001000230.A9


title: GBM cell 1755

description:
Single cell from Tumor
1001000230.D7


title: GBM cell 1754

description:
Single cell from Tumor
1001000230.E1


title: GBM cell 1752

description:
Single cell from Tumor
1001000230.F4


title: GBM cell 1753

description:
Single cell from Tumor
1001000230.H3


title: GBM cell 1758

description:
Single cell from Tumor
1001000230.D2


title: GBM cell 1744

description:
Single cell from Tumor
1001000229.B1


title: GBM cell 1745

description:
Single cell from Tumor
1001000229.E8


title: GBM cell 1743

description:
Single cell from Tumor
1001000229.F5


title: GBM cell 1748

description:
Single cell from Tumor
1001000229.H11


title: GBM cell 1746

description:
Single cell from Tumor
1001000229.G11


title: GBM cell 1750

description:
Single cell from Tumor
1001000229.F12


title: GBM cell 1742

description:
Single cell from Tumor
1001000229.E1


title: GBM cell 1749

description:
Single cell from Tumor
1001000229.A10


title: GBM cell 1766

description:
Single cell from Tumor
1001000230.B12


title: GBM cell 1738

description:
Single cell from Tumor
1001000229.G6


title: GBM cell 1737

description:
Single cell from Tumor
1001000229.G4


title: GBM cell 1751

description:
Single cell from Tumor
1001000230.D4


title: GBM cell 1730

description:
Single cell from Tumor
1001000229.C7


title: GBM cell 1733

description:
Single cell from Tumor
1001000229.E3


title: GBM cell 1731

description:
Single cell from Tumor
1001000229.F3


title: GBM cell 1734

description:
Single cell from Tumor
1001000229.D8


title: GBM cell 1732

description:
Single cell from Tumor
1001000229.D1


title: GBM cell 1726

description:
Single cell from Tumor
1001000229.D3


title: GBM cell 1724

description:
Single cell from Tumor
1001000229.A8


title: GBM cell 1736

description:
Single cell from Tumor
1001000229.B12


title: GBM cell 1723

description:
Single cell from Tumor
1001000229.A11


title: GBM cell 1727

description:
Single cell from Tumor
1001000229.C1


title: GBM cell 1747

description:
Single cell from Tumor
1001000229.C12


title: GBM cell 1729

description:
Single cell from Tumor
1001000229.B6


title: GBM cell 1721

description:
Single cell from Tumor
1001000229.A1


title: GBM cell 1719

description:
Single cell from Tumor
1001000229.C8


title: GBM cell 1722

description:
Single cell from Tumor
1001000229.F8


title: GBM cell 1715

description:
Single cell from Tumor
1001000229.E4


title: GBM cell 1716

description:
Single cell from Tumor
1001000229.B7


title: GBM cell 1717

description:
Single cell from Tumor
1001000229.B4


title: GBM cell 1740

description:
Single cell from Tumor
1001000229.C10


title: GBM cell 1714

description:
Single cell from Tumor
1001000229.E12


title: GBM cell 1720

description:
Single cell from Tumor
1001000229.H3


title: GBM cell 1728

description:
Single cell from Tumor
1001000229.A3


title: GBM cell 1718

description:
Single cell from Tumor
1001000229.F1


title: GBM cell 1735

description:
Single cell from Tumor
1001000229.H5


title: GBM cell 1713

description:
Single cell from Tumor
1001000229.G1


title: GBM cell 1708

description:
Single cell from Tumor
1001000229.G8


title: GBM cell 1710

description:
Single cell from Tumor
1001000229.B10


title: GBM cell 1709

description:
Single cell from Tumor
1001000229.D10


title: GBM cell 1704

description:
Single cell from Tumor
1001000229.H1


title: GBM cell 1705

description:
Single cell from Tumor
1001000229.C5


title: GBM cell 1703

description:
Single cell from Tumor
1001000229.D5


title: GBM cell 1702

description:
Single cell from Tumor
1001000229.F6


title: GBM cell 1699

description:
Single cell from Tumor
1001000229.H6


title: GBM cell 1697

description:
Single cell from Tumor
1001000229.E9


title: GBM cell 1698

description:
Single cell from Tumor
1001000229.E2


title: GBM cell 1696

description:
Single cell from Tumor
1001000229.D7


title: GBM cell 1695

description:
Single cell from Tumor
1001000229.G7


title: GBM cell 1711

description:
Single cell from Tumor
1001000229.C3


title: GBM cell 1694

description:
Single cell from Tumor
1001000229.A6


title: GBM cell 1692

description:
Single cell from Tumor
1001000229.H10


title: GBM cell 1707

description:
Single cell from Tumor
1001000229.E10


title: GBM cell 1685

description:
Single cell from Tumor
1001000229.C11


title: GBM cell 1689

description:
Single cell from Tumor
1001000229.D2


title: GBM cell 1684

description:
Single cell from Tumor
1001000229.B5


title: GBM cell 1683

description:
Single cell from Tumor
1001000229.A2


title: GBM cell 1687

description:
Single cell from Tumor
1001000229.A4


title: GBM cell 1706

description:
Single cell from Tumor
1001000229.E6


title: GBM cell 1688

description:
Single cell from Tumor
1001000229.C6


title: GBM cell 1712

description:
Single cell from Tumor
1001000229.H8


title: GBM cell 1686

description:
Single cell from Tumor
1001000229.H4


title: GBM cell 1682

description:
Single cell from Tumor
1001000229.A7


title: GBM cell 1690

description:
Single cell from Tumor
1001000229.G5


title: GBM cell 1691

description:
Single cell from Tumor
1001000229.F4


title: GBM cell 1676

description:
Single cell from Tumor
1001000229.H2


title: GBM cell 1675

description:
Single cell from Tumor
1001000229.E11


title: GBM cell 1701

description:
Single cell from Tumor
1001000229.B2


title: GBM cell 1681

description:
Single cell from Tumor
1001000229.H9


title: GBM cell 1680

description:
Single cell from Tumor
1001000229.F9


title: GBM cell 1678

description:
Single cell from Tumor
1001000229.F2


title: GBM cell 1674

description:
Single cell from Tumor
1001000229.C2


title: GBM cell 1673

description:
Single cell from Tumor
1001000229.D11


title: GBM cell 1677

description:
Single cell from Tumor
1001000229.D4


title: GBM cell 1700

description:
Single cell from Tumor
1001000229.B9


title: GBM cell 1693

description:
Single cell from Tumor
1001000229.F11


title: GBM cell 1679

description:
Single cell from Tumor
1001000229.G12


title: GBM cell 1670

description:
Single cell from Tumor
1001000229.G2


title: GBM cell 1669

description:
Single cell from Tumor
1001000229.C4


title: GBM cell 1667

description:
Single cell from Tumor
1001000229.G9


title: GBM cell 1668

description:
Single cell from Tumor
1001000229.D6


title: GBM cell 1671

description:
Single cell from Tumor
1001000229.E7


title: GBM cell 1666

description:
Single cell from Tumor
1001000229.B8


title: GBM cell 1660

description:
Single cell from Tumor
1001000229.A12


title: GBM cell 1665

description:
Single cell from Tumor
1001000229.C9


title: GBM cell 1664

description:
Single cell from Tumor
1001000229.H7


title: GBM cell 1662

description:
Single cell from Tumor
1001000229.B3


title: GBM cell 1663

description:
Single cell from Tumor
1001000229.F7


title: GBM cell 1659

description:
Single cell from Tumor
1001000229.G10


title: GBM cell 1661

description:
Single cell from Tumor
1001000229.B11


title: GBM cell 1657

description:
Single cell from Tumor
1001000037.C1


title: GBM cell 1658

description:
Single cell from Tumor
1001000037.H4


title: GBM cell 1653

description:
Single cell from Tumor
1001000037.F9


title: GBM cell 1656

description:
Single cell from Tumor
1001000037.D6


title: GBM cell 1654

description:
Single cell from Tumor
1001000037.B9


title: GBM cell 1655

description:
Single cell from Tumor
1001000037.H7


title: GBM cell 1652

description:
Single cell from Tumor
1001000037.A9


title: GBM cell 1672

description:
Single cell from Tumor
1001000229.E5


title: GBM cell 1651

description:
Single cell from Tumor
1001000037.F4


title: GBM cell 1650

description:
Single cell from Tumor
1001000037.D9


title: GBM cell 1649

description:
Single cell from Tumor
1001000037.H5


title: GBM cell 1647

description:
Single cell from Tumor
1001000037.H3


title: GBM cell 1646

description:
Single cell from Tumor
1001000037.C2


title: GBM cell 1643

description:
Single cell from Tumor
1001000037.E11


title: GBM cell 1644

description:
Single cell from Tumor
1001000037.E9


title: GBM cell 1642

description:
Single cell from Tumor
1001000037.E4


title: GBM cell 1645

description:
Single cell from Tumor
1001000037.H1


title: GBM cell 1641

description:
Single cell from Tumor
1001000037.G10


title: GBM cell 1638

description:
Single cell from Tumor
1001000037.C5


title: GBM cell 1637

description:
Single cell from Tumor
1001000037.G5


title: GBM cell 1640

description:
Single cell from Tumor
1001000037.A3


title: GBM cell 1635

description:
Single cell from Tumor
1001000037.A4


title: GBM cell 1648

description:
Single cell from Tumor
1001000037.D8


title: GBM cell 1633

description:
Single cell from Tumor
1001000037.A2


title: GBM cell 1634

description:
Single cell from Tumor
1001000037.A6


title: GBM cell 1632

description:
Single cell from Tumor
1001000037.B6


title: GBM cell 1636

description:
Single cell from Tumor
1001000037.E1


title: GBM cell 1629

description:
Single cell from Tumor
1001000037.A11


title: GBM cell 1628

description:
Single cell from Tumor
1001000037.A12


title: GBM cell 1630

description:
Single cell from Tumor
1001000037.A1


title: GBM cell 1627

description:
Single cell from Tumor
1001000037.E6


title: GBM cell 1631

description:
Single cell from Tumor
1001000037.F11


title: GBM cell 1626

description:
Single cell from Tumor
1001000037.G3


title: GBM cell 1625

description:
Single cell from Tumor
1001000037.C10


title: GBM cell 1624

description:
Single cell from Tumor
1001000037.H6


title: GBM cell 1622

description:
Single cell from Tumor
1001000037.C4


title: GBM cell 1621

description:
Single cell from Tumor
1001000037.F2


title: GBM cell 1620

description:
Single cell from Tumor
1001000037.D1


title: GBM cell 1623

description:
Single cell from Tumor
1001000037.H8


title: GBM cell 1639

description:
Single cell from Tumor
1001000037.F6


title: GBM cell 1619

description:
Single cell from Tumor
1001000037.G12


title: GBM cell 1618

description:
Single cell from Tumor
1001000037.C3


title: GBM cell 1615

description:
Single cell from Tumor
1001000037.D5


title: GBM cell 1617

description:
Single cell from Tumor
1001000037.F7


title: GBM cell 1614

description:
Single cell from Tumor
1001000037.D4


title: GBM cell 1616

description:
Single cell from Tumor
1001000037.F5


title: GBM cell 1613

description:
Single cell from Tumor
1001000037.G4


title: GBM cell 1610

description:
Single cell from Tumor
1001000037.A10


title: GBM cell 1609

description:
Single cell from Tumor
1001000037.B5


title: GBM cell 1608

description:
Single cell from Tumor
1001000037.C12


title: GBM cell 1606

description:
Single cell from Tumor
1001000037.F10


title: GBM cell 1605

description:
Single cell from Tumor
1001000037.B3


title: GBM cell 1604

description:
Single cell from Tumor
1001000037.D3


title: GBM cell 1603

description:
Single cell from Tumor
1001000037.D10


title: GBM cell 1599

description:
Single cell from Tumor
1001000037.B7


title: GBM cell 1601

description:
Single cell from Tumor
1001000037.G2


title: GBM cell 1600

description:
Single cell from Tumor
1001000037.B1


title: GBM cell 1602

description:
Single cell from Tumor
1001000037.E3


title: GBM cell 1598

description:
Single cell from Tumor
1001000037.G7


title: GBM cell 1596

description:
Single cell from Tumor
1001000037.G11


title: GBM cell 1594

description:
Single cell from Tumor
1001000037.E8


title: GBM cell 1607

description:
Single cell from Tumor
1001000037.D2


title: GBM cell 1595

description:
Single cell from Tumor
1001000037.A5


title: GBM cell 1611

description:
Single cell from Tumor
1001000037.E2


title: GBM cell 1592

description:
Single cell from Tumor
1001000037.F12


title: GBM cell 1593

description:
Single cell from Tumor
1001000037.B11


title: GBM cell 1591

description:
Single cell from Tumor
1001000037.D7


title: GBM cell 1612

description:
Single cell from Tumor
1001000037.H10


title: GBM cell 1590

description:
Single cell from Tumor
1001000037.E10


title: GBM cell 1589

description:
Single cell from Tumor
1001000037.C7


title: GBM cell 1584

description:
Single cell from Tumor
1001000037.B10


title: GBM cell 1583

description:
Single cell from Tumor
1001000037.C11


title: GBM cell 1587

description:
Single cell from Tumor
1001000037.C6


title: GBM cell 1582

description:
Single cell from Tumor
1001000037.F1


title: GBM cell 1588

description:
Single cell from Tumor
1001000037.B12


title: GBM cell 1579

description:
Single cell from Tumor
1001000037.C9


title: GBM cell 1585

description:
Single cell from Tumor
1001000037.G1


title: GBM cell 1586

description:
Single cell from Tumor
1001000037.A8


title: GBM cell 1597

description:
Single cell from Tumor
1001000037.E7


title: GBM cell 1576

description:
Single cell from Tumor
1001000036.E12


title: GBM cell 1578

description:
Single cell from Tumor
1001000037.G9


title: GBM cell 1581

description:
Single cell from Tumor
1001000037.C8


title: GBM cell 1577

description:
Single cell from Tumor
1001000037.B8


title: GBM cell 1574

description:
Single cell from Tumor
1001000036.F9


title: GBM cell 1573

description:
Single cell from Tumor
1001000036.D2


title: GBM cell 1572

description:
Single cell from Tumor
1001000036.E5


title: GBM cell 1575

description:
Single cell from Tumor
1001000036.A8


title: GBM cell 1571

description:
Single cell from Tumor
1001000036.E11


title: GBM cell 1567

description:
Single cell from Tumor
1001000036.A3


title: GBM cell 1568

description:
Single cell from Tumor
1001000036.C11


title: GBM cell 1565

description:
Single cell from Tumor
1001000036.D10


title: GBM cell 1564

description:
Single cell from Tumor
1001000036.A11


title: GBM cell 1741

description:
Single cell from Tumor
1001000229.A5


title: GBM cell 1739

description:
Single cell from Tumor
1001000229.F10


title: GBM cell 1566

description:
Single cell from Tumor
1001000036.B7


title: GBM cell 1569

description:
Single cell from Tumor
1001000036.B5


title: GBM cell 1563

description:
Single cell from Tumor
1001000036.F4


title: GBM cell 1725

description:
Single cell from Tumor
1001000229.G3


title: GBM cell 1562

description:
Single cell from Tumor
1001000036.G3


title: GBM cell 1560

description:
Single cell from Tumor
1001000036.E2


title: GBM cell 1561

description:
Single cell from Tumor
1001000036.H5


title: GBM cell 1558

description:
Single cell from Tumor
1001000036.B9


title: GBM cell 1559

description:
Single cell from Tumor
1001000036.D6


title: GBM cell 1580

description:
Single cell from Tumor
1001000037.F8


title: GBM cell 1557

description:
Single cell from Tumor
1001000036.C1


title: GBM cell 1556

description:
Single cell from Tumor
1001000036.D11


title: GBM cell 1555

description:
Single cell from Tumor
1001000036.B3


title: GBM cell 1553

description:
Single cell from Periphery
1001000034.H10


title: GBM cell 1552

description:
Single cell from Periphery
1001000034.C12


title: GBM cell 1551

description:
Single cell from Periphery
1001000034.B2


title: GBM cell 1549

description:
Single cell from Periphery
1001000034.G7


title: GBM cell 1554

description:
Single cell from Tumor
1001000036.H9


title: GBM cell 1550

description:
Single cell from Periphery
1001000034.D3


title: GBM cell 1547

description:
Single cell from Tumor
1001000033.B4


title: GBM cell 1548

description:
Single cell from Periphery
1001000034.C11


title: GBM cell 1546

description:
Single cell from Tumor
1001000033.D10


title: GBM cell 1570

description:
Single cell from Tumor
1001000036.E9


title: GBM cell 1544

description:
Single cell from Tumor
1001000033.G5


title: GBM cell 1543

description:
Single cell from Tumor
1001000033.D4


title: GBM cell 1541

description:
Single cell from Tumor
1001000033.E3


title: GBM cell 1539

description:
Single cell from Tumor
1001000033.D1


title: GBM cell 1542

description:
Single cell from Tumor
1001000033.C8


title: GBM cell 1538

description:
Single cell from Tumor
1001000033.G7


title: GBM cell 1540

description:
Single cell from Tumor
1001000033.H1


title: GBM cell 1537

description:
Single cell from Tumor
1001000033.A2


title: GBM cell 1535

description:
Single cell from Tumor
1001000033.C1


title: GBM cell 1534

description:
Single cell from Tumor
1001000033.F2


title: GBM cell 1529

description:
Single cell from Tumor
1001000033.E12


title: GBM cell 1533

description:
Single cell from Tumor
1001000033.C9


title: GBM cell 1531

description:
Single cell from Tumor
1001000033.H9


title: GBM cell 1528

description:
Single cell from Tumor
1001000033.A10


title: GBM cell 1536

description:
Single cell from Tumor
1001000033.H8


title: GBM cell 1530

description:
Single cell from Tumor
1001000033.H6


title: GBM cell 1527

description:
Single cell from Tumor
1001000033.C4


title: GBM cell 1526

description:
Single cell from Tumor
1001000033.C3


title: GBM cell 1523

description:
Single cell from Tumor
1001000033.D3


title: GBM cell 1520

description:
Single cell from Tumor
1001000033.G3


title: GBM cell 1524

description:
Single cell from Tumor
1001000033.F4


title: GBM cell 1521

description:
Single cell from Tumor
1001000033.G4


title: GBM cell 1522

description:
Single cell from Tumor
1001000033.C2


title: GBM cell 1525

description:
Single cell from Tumor
1001000033.B7


title: GBM cell 1519

description:
Single cell from Tumor
1001000033.G2


title: GBM cell 1545

description:
Single cell from Tumor
1001000033.A9


title: GBM cell 1517

description:
Single cell from Tumor
1001000033.B9


title: GBM cell 1518

description:
Single cell from Tumor
1001000033.G8


title: GBM cell 1516

description:
Single cell from Tumor
1001000033.G10


title: GBM cell 1515

description:
Single cell from Tumor
1001000033.E1


title: GBM cell 1511

description:
Single cell from Tumor
1001000033.D2


title: GBM cell 1512

description:
Single cell from Tumor
1001000033.E11


title: GBM cell 1532

description:
Single cell from Tumor
1001000033.F1


title: GBM cell 1510

description:
Single cell from Tumor
1001000033.G6


title: GBM cell 1508

description:
Single cell from Tumor
1001000033.A1


title: GBM cell 1509

description:
Single cell from Tumor
1001000033.B6


title: GBM cell 1507

description:
Single cell from Tumor
1001000033.A3


title: C42B_deletion_ld9_rep2 RNA-seq

city: Los Angeles

first: Zhifei

last: Luo

state: CA

address: 1450 Biggy Street, NRT 6514

institute: University of Southern California

data_processing:
RNA-seq data was inspected by FastQC and trimmed using Trimmomatic version 0.35. Reads were mapped to human genome GRCh37 using STAR version 2.5.2b with default settings.
Alignment results were processed for gene quantification using featureCounts version 1.5.1 with the strand-specific option
Differentially expressed genes were determined using DESeq2 version 1.14.1
TPM values for each gene were calculated by RSEM v1.3.0
Genome_build: GRCh37

molecule: total RNA

source_name: Human prostate cell line C42B

growth_protocol: The human prostate cell line C4-2B was grown in RPMI 1640 medium (Corning Cellgro) with 10% fetal bovine serum (Gibco Life Technologies) without antibiotics. RWPE-1 cells were cultured in Keratinocyte Serum Free Medium (Thermo Fisher Scientific, cat. no. 17005-042) without antibiotics. To passage the cells, 0.05% trypsin-0.02% EDTA solution was used and the trypsinization was stopped by adding Dulbecco's phosphate-buffered saline containing 2% FBS. Cells were grown at 37 °C with 5% CO2 for under 20 passages. The cell line identity was confirmed using the STR cell line authentication method at the Norris Comprehensive Cancer Center Media Core and was shown to be free of mycoplasma using the universal mycoplasma detection kit (ATCC 30-1012K).

extract_protocol:
The RNA-seq libraries were made using KAPA stranded mRNA-seq kits (KAPK Biosystems, cat. no. kk8421) according to manufacturer’s instructions
In situ HiC experiments were performed in RWPE-1 cells following the original protocol by Rao et al with minor modifications. HiC was performed in duplicate and 5 x 106 cells were used for each experiment. 100U of MboI restriction enzyme (NEB, R0147) was used to digest chromatin. For ligation, 2000U T4 DNA Ligase (NEB, M0202) was added and incubated at room temperature for 4 hours with slow rotation. HiC material was sheared to a size of 300-500bp using a Covaris instrument (Covaris S2, Woburn, MA). Biotin-tagged DNA was pulled down using Dynabeads MyOne Streptavidin C1 beads (Life technologies, 65002) with 2X Binding Buffer (2X BB: 10mM Tris-HCl (pH 7.5), 1nM EDTA, 2M NaCl). HiC library was amplified with 14 cycles of PCR using Illumina primers.

treatment_protocol: To delete the 7p15.2 risk SNP-containing region in C4-2B cells, 1×10^5 cells were mixed with 1.5μg plasmid and electroporated in a 10μl tip using a Neon transfection kit and device (Invitrogen, catalog#MPK5000) with the following conditions: pulse voltage 1250, pulse width 20, pulse number 1. Each tip was used 3 times and 3x105 transfected cells were seeded into 1 well of a 6 well plate (>80% efficiency). C4-2B were first transfected with a GFP plasmid plus gRNA 3+4 or 5+6. 48 hours after transfection, C4-2B cells were sorted into 96-well plates, one cell per well using a BD FACS Aria I or II cell sorter (BD Biosciences) at the USC Stem Cell flow cytometer core. When 50% confluent in 96 well plates, the C4-2B cells were dissociated directly by vigorously pipetting 20 times. 70% of the cells were collected for genotyping and the rest were left in the plate for subculture. However, due to the tetraploid karyotype of C4-2B cells, only partial deletions were identified in the first round of screening (78 of 193 colonies had some of the alleles deleted). Therefore, two rounds of genome editing were performed in C4-2B cells. The 2 colonies with the largest number of deleted alleles were re-transfected using gRNAs 1+2; 48 hours later 400ng/µl puromycin was added to the media and cells were cultured for 4 days. The surviving cells were seeded individually into 96 well plates and genotyped as described above. Among the 250 tested colonies, 3 (1 previously transfected with gRNA 3+4 and 2 previously transfected with gRNA 5+6) were identified as full deletion clones. For overexpression, RWPE-1 cells were transfected with equal amounts of a HOXA13 expression vector (GeneCopoeiaTM cat. no. EX-I0919-M14) or the corresponding control plasmid expressing eGFP (GeneCopoeiaTM cat. no. EX-EGFP-M14) and harvested 48 hours later. Cells were analyzed by FACS to identify GFP-positive cells and the top 10% eGFP positive cells from 3 control and 3 HOXA13-expressing flasks were collected by cell sorting and subjected to RNA isolation, followed by RNA-seq analysis.

tag: treatment

value: Genome Editing

tag: genotype

value: 7p15.2 risk region deleted


title: C42B_deletion_le5_rep3 RNA-seq


title: C42B_deletion_ld9_rep1 RNA-seq


title: C42B_deletion_m_rep2 RNA-seq


title: C42B_deletion_le5_rep1 RNA-seq


title: C42B_deletion_m_rep3 RNA-seq


title: C42B_control3_rep1 RNA-seq

value: wild type


title: C42B_control3_rep2 RNA-seq


title: C42B_deletion_m_rep1 RNA-seq


title: C42B_control2_rep3 RNA-seq


title: C42B_control1_rep3 RNA-seq


title: C42B_control2_rep1 RNA-seq


title: C42B_control1_rep2 RNA-seq


title: C42B_control1_rep1 RNA-seq


title: GBM cell 1514

description:
Single cell from Tumor
1001000033.B1

value: glioblastoma

value: Tumor


title: GBM cell 1513

description:
Single cell from Tumor
1001000033.E7