title: E17_4_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,OAT:421.1,SWEET_POTATO:105.3,BEEF:52.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_1_m5 [COPRO-Seq]

status: Public on May 20 2011

type: SRA

city: Saint Louis

first: Jeremiah

middle: J

last: Faith

state: MO

address: Campus Box 8510

country: USA

institute: Washington University in St. Louis

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,OAT:421.1,CHICK:105.3,RICE:52.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1

library_source: genomic

data_processing: After dividing sequence runs by barcode, we mapped the reads to the relevant genomes using the ssaha2 algorithm. Minimum score thresholds for ssaha were selected based on the distribution of scores for all mapped reads of a 32nt barcoded sample and a 36-nt non-barcoded sample (29 was selected as the minimum score for 32nt barcoded samples; 33 was the minimum score used for 36-nt non-barcoded samples). Although an 18-nt read is sufficient to map more than 90% of the sequencing reads, even at 32-36nt there is a large fraction of the reads that map to multiple locations within a genome or across genomes. Reads that map non-uniquely were discarded.

molecule: genomic DNA

organism:
[Clostridium] symbiosum
Bacteroides thetaiotaomicron VPI-5482
Bacteroides ovatus ATCC 8483
Bacteroides caccae ATCC 43185
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Marvinbryantia formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Agathobacter rectalis ATCC 33656
Desulfovibrio piger GOR1

source_name: mouse feces

growth_protocol: Fecal samples obtained from mice were span frozen in liquid nitrogen and stored at -80¬∞C and maintained at this temperature prior to processing.

extract_protocol:
Fecal samples obtained from mice were immediately frozen in liquid nitrogen and stored at -80 °C until processing. All of the samples were suspended in a solution containing 500 ul of acid-washed glass beads (Sigma-Aldrich), 500 ul of extraction buffer A (200 mM Tris [pH 8], 200 mM NaCl, 20 mM EDTA), 200 ul of 20% SDS, and 500 ul of a mixture of phenol:chloroform:isoamyl alcohol (25:24:1, pH 8.0; Ambion) and lysed by using a bead beater (BioSpec Products). Cellular debris was removed by centrifugation (8,000g; 3 min). The nucleic acids were precipitated with isopropanol and sodium acetate and resuspended in 100 ul TE. The resuspension was further purified with a Qiagen PCR column and eluted into 30 ul of EB buffer.
Libraries were prepared according to Illumina's instructions accompanying the genomic DNA Sample Kit. Briefly, gDNA was sonicated in a biorupter sonicator, cleaned up/concentrated through a Qiagen PCR column, and end-repaired. The blunt DNA was treated with Klenow fragment (exo minus) to add an A-overhang, and ligated to the relevant Illumina adapter sequence (either with our without a barcode).  Adaptered-DNA was then size-selected on a agarose gel and PCR amplified. The purified PCR was captured on an Illumina flow cell for cluster generation. Libraries were sequenced on the Genome Analyzer following the manufacturer's protocols.library strategy

tag: sample source

tag: diet

tag: time


title: E17_4_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,OAT:421.1,CHICK:105.3,RICE:52.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_1_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:421.1,CHICK:421.1,RICE:105.3,PEACH:52.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_4_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => CHICK:421.1,BEEF:421.1,PEA:105.3,APPLE:52.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_6_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,RICE:421.1,CHICK:105.3,PEA:52.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_6_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:421.1,RICE:421.1,CHICK:105.3:APPLE:52.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_4_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:421.1,CHICK:421.1,RICE:105.3,PEACH:52.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_1_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,OAT:421.1,SWEET_POTATO:105.3,BEEF:52.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_6_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,OAT:421.1,SWEET_POTATO:105.3,BEEF:52.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_1_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,RICE:421.1,CHICK:105.3,PEA:52.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_6_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => CHICK:421.1,BEEF:421.1,PEA:105.3,APPLE:52.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_7_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:421.1,RICE:421.1,CHICK:105.3:APPLE:52.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_6_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,BEEF:421.1,OAT:105.3,RICE:52.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_6_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,OAT:421.1,CHICK:105.3,RICE:52.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_6_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:421.1,CHICK:421.1,RICE:105.3,PEACH:52.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_4_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,RICE:421.1,CHICK:105.3,PEA:52.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_7_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,RICE:421.1,CHICK:105.3,PEA:52.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_7_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:421.1,CHICK:421.1,RICE:105.3,PEACH:52.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_1_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:250,OAT:250,BEEF:250,CHICK:250. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_7_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,BEEF:421.1,OAT:105.3,RICE:52.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_4_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,BEEF:421.1,OAT:105.3,RICE:52.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_1_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,RICE:250,OAT:250,BEEF:250. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_1_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:250,BEEF:250,PEACH:250,RICE:250. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_1_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:250,OAT:250,RICE:250,SWEET_POTATO:250. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_4_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:250,BEEF:250,PEACH:250,RICE:250. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_4_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:250,OAT:250,RICE:250,SWEET_POTATO:250. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_1_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,RICE:250,PEACH:250,CHICK:250. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_1_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,OAT:250,RICE:250,BEEF:250. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_1_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:250,APPLE:250,PEACH:250,BEEF:250. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_7_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:421.1,APPLE:421.1,BEEF:105.3,RICE:52.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_4_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:250,PEA:250,CHICK:250,OAT:250. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_4_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,OAT:250,RICE:250,BEEF:250. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_4_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,RICE:250,PEACH:250,CHICK:250. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_4_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,RICE:250,OAT:250,BEEF:250. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_1_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:250,PEA:250,CHICK:250,OAT:250. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_6_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:250,PEA:250,CHICK:250,OAT:250. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_6_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,RICE:250,OAT:250,BEEF:250. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_4_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:250,APPLE:250,PEACH:250,BEEF:250. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_6_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:250,OAT:250,BEEF:250,CHICK:250. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_6_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:250,OAT:250,RICE:250,SWEET_POTATO:250. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_6_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:250,BEEF:250,PEACH:250,RICE:250. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_6_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,RICE:250,PEACH:250,CHICK:250. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_6_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,OAT:250,RICE:250,BEEF:250. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E17_7_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,OAT:421.1,SWEET_POTATO:105.3,BEEF:52.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_7_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:250,BEEF:250,PEACH:250,RICE:250. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_7_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,RICE:250,OAT:250,BEEF:250. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_7_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:250,OAT:250,BEEF:250,CHICK:250. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_7_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:250,OAT:250,RICE:250,SWEET_POTATO:250. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_7_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:250,APPLE:250,PEACH:250,BEEF:250. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_7_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:250,PEA:250,CHICK:250,OAT:250. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_7_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,RICE:250,PEACH:250,CHICK:250. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_6_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:250,APPLE:250,PEACH:250,BEEF:250. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_1_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:666.7,RICE:222.2,BEEF:55.6,SWEET_POTATO:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_1_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,APPLE:222.2,BEEF:55.6,PEACH:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_1_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,CHICK:222.2,BEEF:55.6,PEA:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_1_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:666.7,PEACH:222.2,SWEET_POTATO:55.6,RICE:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_4_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:666.7,PEACH:222.2,CHICK:55.6,SWEET_POTATO:55.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_1_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:666.7,PEACH:222.2,CHICK:55.6,SWEET_POTATO:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_4_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,CHICK:222.2,BEEF:55.6,PEA:55.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_4_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:666.7,RICE:222.2,BEEF:55.6,SWEET_POTATO:55.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_1_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => RICE:666.7,APPLE:222.2,SWEET_POTATO:55.6,BEEF:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_4_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,PEACH:222.2,CHICK:55.6,OAT:55.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_4_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:666.7,PEA:222.2,OAT:55.6,RICE:55.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_6_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:666.7,RICE:222.2,BEEF:55.6,SWEET_POTATO:55.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_4_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => RICE:666.7,APPLE:222.2,SWEET_POTATO:55.6,BEEF:55.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_4_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:666.7,PEACH:222.2,SWEET_POTATO:55.6,RICE:55.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_6_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,CHICK:222.2,BEEF:55.6,PEA:55.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_6_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:666.7,PEA:222.2,OAT:55.6,RICE:55.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_6_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => RICE:666.7,APPLE:222.2,SWEET_POTATO:55.6,BEEF:55.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_6_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,PEACH:222.2,CHICK:55.6,OAT:55.6. Sample was taken after mouse was on the diet for 6 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_7_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,CHICK:222.2,BEEF:55.6,PEA:55.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_7_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:666.7,PEA:222.2,OAT:55.6,RICE:55.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_4_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,APPLE:222.2,BEEF:55.6,PEACH:55.6. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_7_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,PEACH:222.2,CHICK:55.6,OAT:55.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_7_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:666.7,RICE:222.2,BEEF:55.6,SWEET_POTATO:55.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E19_7_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:250,OAT:250,RICE:250,BEEF:250. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_7_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,APPLE:222.2,BEEF:55.6,PEACH:55.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_1_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,PEACH:222.2,CHICK:55.6,OAT:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_1_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:666.7,PEA:222.2,OAT:55.6,RICE:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_7_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:666.7,PEACH:222.2,SWEET_POTATO:55.6,RICE:55.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: 18_HF_HP_noDP [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 9-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09057.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1

organism:
[Clostridium] symbiosum
Bacteroides thetaiotaomicron VPI-5482
Bacteroides ovatus ATCC 8483
Bacteroides caccae ATCC 43185
Collinsella aerofaciens ATCC 25986
Marvinbryantia formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Agathobacter rectalis ATCC 33656
Desulfovibrio piger GOR1


title: 9_HF_HP_noDP_noRh [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 8-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09057.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655

organism:
[Clostridium] symbiosum
Bacteroides thetaiotaomicron VPI-5482
Bacteroides ovatus ATCC 8483
Bacteroides caccae ATCC 43185
Collinsella aerofaciens ATCC 25986
Marvinbryantia formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Agathobacter rectalis ATCC 33656


title: 10_HF_HP_noDP_noRh [COPRO-Seq]

value: Fecal pellet from a mouse (c57Bl6) colonized with 8-gut bacteria

value: Mouse was fed Harlan Teklad Diet TD.09057.


title: 19_HF_HP_noDP [COPRO-Seq]

value: Fecal pellet from a mouse (c57Bl6) colonized with 9-gut bacteria


title: 5_HF_LP_noDP_noRh [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 8-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09055.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655


title: 13_HF_LP_noDP [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 9-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09055.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: 15_HF_LP_noDP [COPRO-Seq]

value: Mouse was fed Harlan Teklad Diet TD.09055.


title: 7_HF_HP_noDP_noRh [COPRO-Seq]


title: 12_HF_LP_noDP [COPRO-Seq]


title: 3_HF_LP_noDP_noRh [COPRO-Seq]


title: 14_HF_LP_noDP [COPRO-Seq]


title: 6_HF_HP_noDP_noRh [COPRO-Seq]


title: 17_HF_HP_noDP [COPRO-Seq]


title: D3_14_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09058. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: 20_HF_HP_noDP [COPRO-Seq]


title: D3_7_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09058. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_14_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09624. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_14_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09051. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: 1_HF_LP_noDP_noRh [COPRO-Seq]


title: 2_HF_LP_noDP_noRh [COPRO-Seq]


title: E2_7_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_2_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09052. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_1_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E9_7_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => RICE:666.7,APPLE:222.2,SWEET_POTATO:55.6,BEEF:55.6. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_4_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_4_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09622. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_7_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09050. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_14_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09054. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_1_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09058. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_1_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09051. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_2_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09624. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_14_m9 [COPRO-Seq]

value: Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria

value: Mouse was fed Harlan Teklad Diet TD.09058

value: Sample was taken after mouse was on the diet for 14 days.


title: D2_2_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_7_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09620. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E15_1_m7 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,RICE:222.2,PEACH:55.6,BEEF:55.6. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_4_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09059. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_14_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09625. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_2_m12 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09057. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_2_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09055. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E2_14_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09624. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E2_7_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09622. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_7_m6 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09058. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E2_2_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09621. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_14_m11 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09051. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_4_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09052. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_4_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09054. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_2_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09625. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_1_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09055. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_2_m8 [COPRO-Seq]

value: Mouse was fed Harlan Teklad Diet TD.09055

value: Sample was taken after mouse was on the diet for 2 days.


title: E2_14_m7 [COPRO-Seq]

value: Mouse was fed Harlan Teklad Diet TD.09625


title: E2_4_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09620. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_2_m13 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_7_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09621. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E2_1_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09052. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_2_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09056. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_14_m13 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_7_m10 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09056. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_2_m8 [COPRO-Seq]

value: Mouse was fed Harlan Teklad Diet TD.09621


title: E1_4_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09623. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_14_m12 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09052. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_7_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_1_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09622. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_7_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09622. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_1_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09620. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_1_m13 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E2_2_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09622. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E2_7_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09623. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_7_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09620. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_1_m6 [COPRO-Seq]

value: Mouse was fed Harlan Teklad Diet TD.09053

value: Sample was taken after mouse was on the diet for 1 days.


title: D2_4_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_7_m6 [COPRO-Seq]

value: Sample was taken after mouse was on the diet for 7 days.


title: E3_14_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09623. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_4_m10 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09056. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_1_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09050. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_2_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09055. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_1_m10 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09056. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_1_m12 [COPRO-Seq]

value: Mouse was fed Harlan Teklad Diet TD.09050


title: E2_7_m4 [COPRO-Seq]

value: Mouse was fed Harlan Teklad Diet TD.09620


title: D3_4_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09055. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_14_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09622. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_1_m9 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09058. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_7_m13 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_4_m11 [COPRO-Seq]

value: Sample was taken after mouse was on the diet for 4 days.


title: D4_14_m3 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09052. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_4_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09621. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_7_m2 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09054. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D3_14_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09054. Sample was taken after mouse was on the diet for 14 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_1_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09625. Sample was taken after mouse was on the diet for 1 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_2_m13 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09053. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_7_m1 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09057. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E1_2_m4 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09623. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D4_4_m10 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09049. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_7_m9 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09058. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_7_m8 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09624. Sample was taken after mouse was on the diet for 7 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: E3_2_m2 [COPRO-Seq]

value: Mouse was fed Harlan Teklad Diet TD.09623


title: D3_2_m5 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09054. Sample was taken after mouse was on the diet for 2 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1


title: D2_4_m12 [COPRO-Seq]

description:
Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria. Mouse was fed Harlan Teklad Diet TD.09057. Sample was taken after mouse was on the diet for 4 days.
library strategy: COPRO-Seq
Eubacterium rectale ATCC 33656
Bacteroides caccae ATCC 43185
Bacteroides ovatus ATCC 8483
Bacteroides thetaiotaomicron VPI-5482
Clostridium symbiosum
Collinsella aerofaciens ATCC 25986
Blautia hydrogenotrophica DSM 10507
Bryantella formatexigens DSM 14469
Escherichia coli str. K-12 substr. MG1655
Desulfovibrio piger GOR1