title: ChIP-seq from neural tube (ENCLB769ERM)

description:
https://www.encodeproject.org/experiments/ENCSR099BYW/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse neural tube
experiment encode accession: ENCSR099BYW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR254WNU
encode release date: 2014-12-08
lab: Bing Ren, UCSD
library encode accession: ENCLB769ERM
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

value: Neural tube from 34 embryonic 14.5 day mice

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS025AAA at ENCODE; https://www.encodeproject.org/ENCBS025AAA/


title: ChIP-seq from lung (ENCLB267WVU)

status: Public on Jun 22 2016

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR154DTK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 16.5 day mouse lung
experiment encode accession: ENCSR154DTK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR559FAB
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB267WVU
size range: 300-500

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Mus musculus

source_name: Mus musculus strain B6NCrl lung tissue mixed sex embryo (16.5 days)

tag: antibody

value: lung

value: tissue

tag: description

value: Lung pooled from embyonic 16.5 day mice

tag: biosample encode accession

tag: age

tag: dev stage

value: embryonic

tag: Sex

tag: health state

tag: lab

tag: link

value: ENCBS377RBN at ENCODE; https://www.encodeproject.org/ENCBS377RBN/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from lung (ENCLB478CTY)

description:
https://www.encodeproject.org/experiments/ENCSR154DTK/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 16.5 day mouse lung
experiment encode accession: ENCSR154DTK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR559FAB
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB478CTY
size range: 300-500

value: Lung from 41 embyonic 16.5 day mice

value: ENCBS833ZFI at ENCODE; https://www.encodeproject.org/ENCBS833ZFI/


title: ChIP-seq from forebrain (ENCLB803SIF)

description:
https://www.encodeproject.org/experiments/ENCSR243JOL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 12.5 day mouse forebrain
experiment encode accession: ENCSR243JOL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR523QKO
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB803SIF
size range: 300-500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (12.5 days)

value: forebrain

value: Forebrain from 120 embryonic 12.5 day mice

value: ENCBS974GPH at ENCODE; https://www.encodeproject.org/ENCBS974GPH/


title: ChIP-seq from intestine (ENCLB715ZLS)

description:
https://www.encodeproject.org/experiments/ENCSR157LYR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 14.5 day mouse intestine
experiment encode accession: ENCSR157LYR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR645QSY
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB715ZLS
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap intestine tissue mixed sex embryo (14.5 days)

value: intestine

value: Intestine from 24 embryonic 14.5 day mice

value: ENCBS008AAA at ENCODE; https://www.encodeproject.org/ENCBS008AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from midbrain (ENCLB063YGK)

description:
https://www.encodeproject.org/experiments/ENCSR252ONR/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR252ONR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR415FCU
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB063YGK
size range: 300-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (12.5 days)

value: midbrain

value: Midbrain from 88 embryonic 12.5 day mice

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS280TPA at ENCODE; https://www.encodeproject.org/ENCBS280TPA/


title: ChIP-seq from neural tube (ENCLB010LER)

description:
https://www.encodeproject.org/experiments/ENCSR107SLP/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K36me3 ChIP-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR107SLP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR295GGT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB010LER
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (13.5 days)

value: neural tube

value: tissue

value: Neural tube from embryonic 13.5 day mice

value: embryonic

value: ENCBS956BQY at ENCODE; https://www.encodeproject.org/ENCBS956BQY/


title: ChIP-seq from limb (ENCLB604DWR)

description:
https://www.encodeproject.org/experiments/ENCSR233LBT/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 12.5 day mouse limb
experiment encode accession: ENCSR233LBT
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR218CUA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB604DWR
size range: 300-500

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (12.5 days)

value: limb

value: Limb from 68 embryonic 12.5 day mice

value: ENCBS313XRY at ENCODE; https://www.encodeproject.org/ENCBS313XRY/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: total RNA-seq from heart (ENCLB230FGL)

description:
https://www.encodeproject.org/experiments/ENCSR150CUE/
***************
biological replicate number: 2
technical replicate number: 1
description: e12.5 heart
experiment encode accession: ENCSR150CUE
assay title: total RNA-seq
assembly: mm10
encode release date: 2016-05-03
lab: Barbara Wold, Caltech
library encode accession: ENCLB230FGL
size range: >200
spikeins used: /references/ENCSR884LPM/
nucleic acid starting quantity: 10.0
nucleic acid starting quantity units: ng

library_source: transcriptomic

molecule: total RNA

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (12.5 days)

value: heart

value: ENCBS004ZLN at ENCODE; https://www.encodeproject.org/ENCBS004ZLN/


title: ChIP-seq from limb (ENCLB441LDF)

description:
https://www.encodeproject.org/experiments/ENCSR098AHF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR098AHF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR070OXL
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB441LDF
size range: 300-500

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (15.5 days)

value: Limb from 78 embryonic 15.5 day mice

value: ENCBS735QNY at ENCODE; https://www.encodeproject.org/ENCBS735QNY/


title: total RNA-seq from heart (ENCLB613DIH)

description:
https://www.encodeproject.org/experiments/ENCSR150CUE/
***************
biological replicate number: 1
technical replicate number: 1
description: e12.5 heart
experiment encode accession: ENCSR150CUE
assay title: total RNA-seq
assembly: mm10
encode release date: 2016-05-03
lab: Barbara Wold, Caltech
library encode accession: ENCLB613DIH
size range: >200
spikeins used: /references/ENCSR884LPM/
nucleic acid starting quantity: 10.0
nucleic acid starting quantity units: ng

value: Heart from 12.5 day mice

value: pooled male and female

value: ENCBS452TDN at ENCODE; https://www.encodeproject.org/ENCBS452TDN/


title: ChIP-seq from neural tube (ENCLB662XVP)

description:
https://www.encodeproject.org/experiments/ENCSR295GGT/
***************
biological replicate number: 2
technical replicate number: 1,2,3
description: Control ChIP-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR295GGT
assay title: ChIP-seq
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB662XVP
size range: 300-500

value: Control

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS549OYR at ENCODE; https://www.encodeproject.org/ENCBS549OYR/


title: ChIP-seq from neural tube (ENCLB230QGB)

description:
https://www.encodeproject.org/experiments/ENCSR093BYV/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K4me3 ChIP-seq on embryonic 14.5 day mouse neural tube
experiment encode accession: ENCSR093BYV
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR254WNU
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB230QGB
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap neural tube tissue mixed sex embryo (14.5 days)

value: neural tube

value: tissue

value: Neural tube from 24 embryonic 14.5 day mice

value: embryonic

value: ENCBS013AAA at ENCODE; https://www.encodeproject.org/ENCBS013AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from limb (ENCLB098AEH)

description:
https://www.encodeproject.org/experiments/ENCSR098AHF/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR098AHF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR070OXL
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB098AEH
size range: 300-500

value: limb

value: Limb from 62 embryonic 15.5 day mice

value: ENCBS696JKV at ENCODE; https://www.encodeproject.org/ENCBS696JKV/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from heart (ENCLB909QYX)

description:
https://www.encodeproject.org/experiments/ENCSR149GUT/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR149GUT
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB909QYX
size range: 180-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (13.5 days)

value: heart

value: Heart from embryonic 13.5 day mice

value: ENCBS490ZWZ at ENCODE; https://www.encodeproject.org/ENCBS490ZWZ/


title: ChIP-seq from limb (ENCLB980TSP)

description:
https://www.encodeproject.org/experiments/ENCSR233LBT/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K36me3 ChIP-seq on embryonic 12.5 day mouse limb
experiment encode accession: ENCSR233LBT
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR218CUA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB980TSP
size range: 300-500

value: Limb from 88 embryonic 12.5 day mice

value: pooled male and female

value: ENCBS731DGJ at ENCODE; https://www.encodeproject.org/ENCBS731DGJ/


title: WGBS from heart (ENCLB086MBV)

description:
https://www.encodeproject.org/experiments/ENCSR149GUT/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR149GUT
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB086MBV
size range: 180-500

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS814PLT at ENCODE; https://www.encodeproject.org/ENCBS814PLT/


title: ChIP-seq from liver (ENCLB758OUO)

description:
https://www.encodeproject.org/experiments/ENCSR220PXJ/
***************
biological replicate number: 2
technical replicate number: 1,2
description: Control ChIP-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR220PXJ
assay title: ChIP-seq
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB758OUO
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (13.5 days)

value: Control

value: liver

value: tissue

value: Liver from embryonic 13.5 day mice

value: ENCBS373XWZ at ENCODE; https://www.encodeproject.org/ENCBS373XWZ/


title: microRNA-seq from embryonic facial prominence (ENCLB557VEK)

description:
https://www.encodeproject.org/experiments/ENCSR091ZTZ/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq  on embryonic 11.5 day mouse cranioface
experiment encode accession: ENCSR091ZTZ
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB557VEK
size range: <30

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (11.5 days)

value: embryonic facial prominence

value: Craniofacial prominence from 88 embyronic 11.5 day mice

value: embryonic

value: ENCBS468NAL at ENCODE; https://www.encodeproject.org/ENCBS468NAL/


title: ChIP-seq from intestine (ENCLB367PNW)

description:
https://www.encodeproject.org/experiments/ENCSR157LYR/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K4me1 ChIP-seq on embryonic 14.5 day mouse intestine
experiment encode accession: ENCSR157LYR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR645QSY
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB367PNW
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

value: intestine

value: Intestine from 34 embryonic 14.5 day mice

value: ENCBS020AAA at ENCODE; https://www.encodeproject.org/ENCBS020AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from limb (ENCLB611NMB)

description:
https://www.encodeproject.org/experiments/ENCSR229LTY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 12.5 day mouse limb
experiment encode accession: ENCSR229LTY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR218CUA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB611NMB
size range: 300-500

value: limb

value: Limb from 88 embryonic 12.5 day mice

value: pooled male and female

value: ENCBS731DGJ at ENCODE; https://www.encodeproject.org/ENCBS731DGJ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from limb (ENCLB412XIA)

description:
https://www.encodeproject.org/experiments/ENCSR229LTY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 12.5 day mouse limb
experiment encode accession: ENCSR229LTY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR218CUA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB412XIA
size range: 300-500

value: Limb from 68 embryonic 12.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS313XRY at ENCODE; https://www.encodeproject.org/ENCBS313XRY/


title: microRNA-seq from embryonic facial prominence (ENCLB002ZQQ)

description:
https://www.encodeproject.org/experiments/ENCSR091ZTZ/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq  on embryonic 11.5 day mouse cranioface
experiment encode accession: ENCSR091ZTZ
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB002ZQQ
size range: <30

value: embryonic facial prominence

value: tissue

value: Craniofacial prominence from 109 embyronic 11.5 day mice

value: ENCBS141GPQ at ENCODE; https://www.encodeproject.org/ENCBS141GPQ/


title: WGBS from heart (ENCLB054AXP)

description:
https://www.encodeproject.org/experiments/ENCSR149GUT/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR149GUT
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB054AXP
size range: 180-500

value: heart

value: Heart from embryonic 13.5 day mice

value: embryonic

value: ENCBS814PLT at ENCODE; https://www.encodeproject.org/ENCBS814PLT/


title: ChIP-seq from limb (ENCLB333RWN)

description:
https://www.encodeproject.org/experiments/ENCSR218CUA/
***************
biological replicate number: 1
technical replicate number: 1,2
description: Control ChIP-seq on embryonic 12.5 day mouse limb
experiment encode accession: ENCSR218CUA
assay title: ChIP-seq
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB333RWN
size range: 300-500

value: Control

value: limb


title: ChIP-seq from kidney (ENCLB748JTN)

description:
https://www.encodeproject.org/experiments/ENCSR091DHJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on embryonic 14.5 day mouse kidney
experiment encode accession: ENCSR091DHJ
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB748JTN
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap kidney tissue mixed sex embryo (14.5 days)

value: kidney

value: Kidney from pooled embryonic 14.5 day mice

value: pooled male and female

value: ENCBS565AAA at ENCODE; https://www.encodeproject.org/ENCBS565AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from kidney (ENCLB148MJJ)

description:
https://www.encodeproject.org/experiments/ENCSR091DHJ/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on embryonic 14.5 day mouse kidney
experiment encode accession: ENCSR091DHJ
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB148MJJ
size range: 300-500

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS569AAA at ENCODE; https://www.encodeproject.org/ENCBS569AAA/


title: ChIP-seq from limb (ENCLB179JSX)

description:
https://www.encodeproject.org/experiments/ENCSR218CUA/
***************
biological replicate number: 2
technical replicate number: 1
description: Control ChIP-seq on embryonic 12.5 day mouse limb
experiment encode accession: ENCSR218CUA
assay title: ChIP-seq
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB179JSX
size range: 300-500

value: tissue

value: Limb from 68 embryonic 12.5 day mice

value: ENCBS313XRY at ENCODE; https://www.encodeproject.org/ENCBS313XRY/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from embryonic facial prominence (ENCLB171DJI)

description:
https://www.encodeproject.org/experiments/ENCSR091WNX/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR091WNX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR981PSX
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB171DJI
size range: 300-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (15.5 days)

value: embryonic facial prominence

value: Embryonic facial prominence from 78 embryonic 15.5 day mice

value: ENCBS543BPM at ENCODE; https://www.encodeproject.org/ENCBS543BPM/


title: WGBS from neural tube (ENCLB369PTG)

description:
https://www.encodeproject.org/experiments/ENCSR144UTF/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse neural tube
experiment encode accession: ENCSR144UTF
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB369PTG
size range: 180-500

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (12.5 days)

value: neural tube

value: Neural tube from 88 embryonic 12.5 day mice

value: embryonic

value: ENCBS254TSW at ENCODE; https://www.encodeproject.org/ENCBS254TSW/


title: ChIP-seq from embryonic facial prominence (ENCLB871XDC)

description:
https://www.encodeproject.org/experiments/ENCSR091WNX/
***************
biological replicate number: 2
technical replicate number: 2,1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR091WNX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR981PSX
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB871XDC
size range: 300-500

value: Embryonic facial prominence from 62 embryonic 15.5 day mice

value: pooled male and female

value: ENCBS900XQR at ENCODE; https://www.encodeproject.org/ENCBS900XQR/


title: ChIP-seq from midbrain (ENCLB332PQB)

description:
https://www.encodeproject.org/experiments/ENCSR088UKA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 11.5 day mouse midbrain
experiment encode accession: ENCSR088UKA
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR081UQY
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB332PQB
size range: 300-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (11.5 days)

value: midbrain

value: Midbrain of 109 embyronic 11.5 day mice

value: healthy

value: ENCBS228OBS at ENCODE; https://www.encodeproject.org/ENCBS228OBS/


title: WGBS from neural tube (ENCLB598SZY)

description:
https://www.encodeproject.org/experiments/ENCSR144UTF/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse neural tube
experiment encode accession: ENCSR144UTF
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB598SZY
size range: 180-500

value: tissue

value: Len Pennacchio, LBNL


title: ChIP-seq from embryonic facial prominence (ENCLB080DFK)

description:
https://www.encodeproject.org/experiments/ENCSR195NDO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR195NDO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR445HBA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB080DFK
size range: 300-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (12.5 days)

value: Embryonic facial prominence from 120 embryonic 12.5 day mice

value: ENCBS047UII at ENCODE; https://www.encodeproject.org/ENCBS047UII/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from heart (ENCLB576AVF)

description:
https://www.encodeproject.org/experiments/ENCSR149GUT/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR149GUT
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB576AVF
size range: 180-500

value: heart

value: Heart from embryonic 13.5 day mice

value: ENCBS490ZWZ at ENCODE; https://www.encodeproject.org/ENCBS490ZWZ/


title: ChIP-seq from forebrain (ENCLB310YFJ)

description:
https://www.encodeproject.org/experiments/ENCSR087JEN/
***************
biological replicate number: 2
technical replicate number: 3,2,1
description: H3K36me3 ChIP-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR087JEN
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR583ZEV
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB310YFJ
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (13.5 days)

value: forebrain

value: Forebrain from embryonic 13.5 day mice

value: embryonic

value: ENCBS793ZRY at ENCODE; https://www.encodeproject.org/ENCBS793ZRY/


title: WGBS from forebrain (ENCLB777KRQ)

description:
https://www.encodeproject.org/experiments/ENCSR141ZVB/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR141ZVB
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB777KRQ
size range: 180-500

value: pooled male and female


title: ChIP-seq from forebrain (ENCLB731NVJ)

description:
https://www.encodeproject.org/experiments/ENCSR161UUY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 12.5 day mouse forebrain
experiment encode accession: ENCSR161UUY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR523QKO
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB731NVJ
size range: 300-500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (12.5 days)

value: Forebrain from 120 embryonic 12.5 day mice

value: ENCBS974GPH at ENCODE; https://www.encodeproject.org/ENCBS974GPH/


title: WGBS from forebrain (ENCLB822LAJ)

description:
https://www.encodeproject.org/experiments/ENCSR141ZVB/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR141ZVB
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB822LAJ
size range: 180-500

value: healthy

value: ENCBS273RVL at ENCODE; https://www.encodeproject.org/ENCBS273RVL/


title: ChIP-seq from forebrain (ENCLB714JHS)

description:
https://www.encodeproject.org/experiments/ENCSR161UUY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 12.5 day mouse forebrain
experiment encode accession: ENCSR161UUY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR523QKO
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB714JHS
size range: 300-500

value: tissue

value: Forebrain from 68 embryonic 12.5 day mice

value: ENCBS617DPG at ENCODE; https://www.encodeproject.org/ENCBS617DPG/


title: ChIP-seq from stomach (ENCLB627QXH)

description:
https://www.encodeproject.org/experiments/ENCSR076MXH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse stomach
experiment encode accession: ENCSR076MXH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR497YBQ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB627QXH
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap stomach tissue mixed sex embryo (14.5 days)

value: stomach

value: Stomach pooled from embryonic 14.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS564AAA at ENCODE; https://www.encodeproject.org/ENCBS564AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: WGBS from forebrain (ENCLB969NAO)

description:
https://www.encodeproject.org/experiments/ENCSR141ZVB/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR141ZVB
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB969NAO
size range: 180-500

value: forebrain

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from liver (ENCLB162QYU)

description:
https://www.encodeproject.org/experiments/ENCSR220PXJ/
***************
biological replicate number: 1
technical replicate number: 2,1,3
description: Control ChIP-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR220PXJ
assay title: ChIP-seq
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB162QYU
size range: 300-500

value: Control

value: liver

value: Liver from embryonic 13.5 day mice

value: embryonic

value: ENCBS146FGW at ENCODE; https://www.encodeproject.org/ENCBS146FGW/


title: WGBS from neural tube (ENCLB601DOT)

description:
https://www.encodeproject.org/experiments/ENCSR144UTF/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse neural tube
experiment encode accession: ENCSR144UTF
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB601DOT
size range: 180-500

value: neural tube

value: Neural tube from 120 embryonic 12.5 day mice

value: pooled male and female

value: healthy

value: ENCBS405OOH at ENCODE; https://www.encodeproject.org/ENCBS405OOH/


title: WGBS from neural tube (ENCLB771BOY)

description:
https://www.encodeproject.org/experiments/ENCSR144UTF/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse neural tube
experiment encode accession: ENCSR144UTF
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB771BOY
size range: 180-500

value: tissue


title: WGBS from forebrain (ENCLB781IAL)

description:
https://www.encodeproject.org/experiments/ENCSR141ZVB/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR141ZVB
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB781IAL
size range: 180-500

value: Forebrain from embryonic 13.5 day mice

value: ENCBS793ZRY at ENCODE; https://www.encodeproject.org/ENCBS793ZRY/


title: ChIP-seq from hindbrain (ENCLB414SHH)

description:
https://www.encodeproject.org/experiments/ENCSR158ONM/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 12.5 day mouse hindbrain
experiment encode accession: ENCSR158ONM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR659EZI
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB414SHH
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (12.5 days)

value: hindbrain

value: Hindbrain from 88 embryonic 12.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS022IBY at ENCODE; https://www.encodeproject.org/ENCBS022IBY/


title: ChIP-seq from embryonic facial prominence (ENCLB845FAX)

description:
https://www.encodeproject.org/experiments/ENCSR076FAM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 11.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR076FAM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR068AQC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB845FAX
size range: 300-500

value: embryonic facial prominence

value: Craniofacial prominence from 109 embyronic 11.5 day mice

value: ENCBS141GPQ at ENCODE; https://www.encodeproject.org/ENCBS141GPQ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from embryonic facial prominence (ENCLB099RJV)

description:
https://www.encodeproject.org/experiments/ENCSR076FAM/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 11.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR076FAM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR068AQC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB099RJV
size range: 300-500

value: Craniofacial prominence from 88 embyronic 11.5 day mice

value: embryonic

value: ENCBS468NAL at ENCODE; https://www.encodeproject.org/ENCBS468NAL/


title: ChIP-seq from hindbrain (ENCLB926QGU)

description:
https://www.encodeproject.org/experiments/ENCSR158ONM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 12.5 day mouse hindbrain
experiment encode accession: ENCSR158ONM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR659EZI
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB926QGU
size range: 300-500

value: Hindbrain from 120 embryonic 12.5 day mice

value: pooled male and female

value: ENCBS406RIE at ENCODE; https://www.encodeproject.org/ENCBS406RIE/


title: ChIP-seq from heart (ENCLB242VMR)

description:
https://www.encodeproject.org/experiments/ENCSR071SQK/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 15.5 day mouse heart
experiment encode accession: ENCSR071SQK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR424WHM
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB242VMR
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (15.5 days)

value: heart

value: tissue

value: Heart from 62 embryonic 15.5 day mice

value: healthy

value: ENCBS909LOF at ENCODE; https://www.encodeproject.org/ENCBS909LOF/


title: ChIP-seq from midbrain (ENCLB286RXL)

description:
https://www.encodeproject.org/experiments/ENCSR157IVC/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR157IVC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR415FCU
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB286RXL
size range: 300-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (12.5 days)

value: midbrain

value: Midbrain from 88 embryonic 12.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS280TPA at ENCODE; https://www.encodeproject.org/ENCBS280TPA/


title: ChIP-seq from heart (ENCLB589KNQ)

description:
https://www.encodeproject.org/experiments/ENCSR071SQK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 15.5 day mouse heart
experiment encode accession: ENCSR071SQK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR424WHM
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB589KNQ
size range: 300-500

value: Heart from 78 embryonic 15.5 day mice

value: ENCBS595EMK at ENCODE; https://www.encodeproject.org/ENCBS595EMK/


title: ChIP-seq from limb (ENCLB895VRD)

description:
https://www.encodeproject.org/experiments/ENCSR070OXL/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR070OXL
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB895VRD
size range: 300-500

value: Control

value: limb

value: Limb from 78 embryonic 15.5 day mice

value: ENCBS735QNY at ENCODE; https://www.encodeproject.org/ENCBS735QNY/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from midbrain (ENCLB208MBW)

description:
https://www.encodeproject.org/experiments/ENCSR157IVC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR157IVC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR415FCU
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB208MBW
size range: 300-500

value: Midbrain from 120 embryonic 12.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS309WCU at ENCODE; https://www.encodeproject.org/ENCBS309WCU/


title: ChIP-seq from liver (ENCLB730GPX)

description:
https://www.encodeproject.org/experiments/ENCSR149GYK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 12.5 day mouse liver
experiment encode accession: ENCSR149GYK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR680ZSE
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB730GPX
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (12.5 days)

value: liver

value: tissue

value: Liver from 120 embryonic 12.5 day mice

value: healthy

value: ENCBS236ISK at ENCODE; https://www.encodeproject.org/ENCBS236ISK/


title: ChIP-seq from forebrain (ENCLB982YTX)

description:
https://www.encodeproject.org/experiments/ENCSR141ZQF/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 16.5 day mouse forebrain
experiment encode accession: ENCSR141ZQF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR587JRQ
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB982YTX
size range: 300-500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (16.5 days)

value: forebrain

value: Forebrain from 41 embyonic 16.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS512LKA at ENCODE; https://www.encodeproject.org/ENCBS512LKA/


title: ChIP-seq from neural tube (ENCLB795DHY)

description:
https://www.encodeproject.org/experiments/ENCSR138YZB/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on embryonic 11.5 day mouse neural tube
experiment encode accession: ENCSR138YZB
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB795DHY
size range: 300-500

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (11.5 days)

value: Control

value: neural tube

value: Neural tube from 88 embyronic 11.5 day mice

value: ENCBS183YVD at ENCODE; https://www.encodeproject.org/ENCBS183YVD/


title: ChIP-seq from liver (ENCLB601YWI)

description:
https://www.encodeproject.org/experiments/ENCSR149GYK/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 12.5 day mouse liver
experiment encode accession: ENCSR149GYK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR680ZSE
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB601YWI
size range: 300-500

value: Liver from 88 embryonic 12.5 day mice

value: ENCBS479VPX at ENCODE; https://www.encodeproject.org/ENCBS479VPX/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: microRNA-seq from limb (ENCLB894MES)

description:
https://www.encodeproject.org/experiments/ENCSR070GAZ/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR070GAZ
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB894MES
size range: <30

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (15.5 days)

value: limb

value: Limb from 62 embryonic 15.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS696JKV at ENCODE; https://www.encodeproject.org/ENCBS696JKV/


title: microRNA-seq from limb (ENCLB582KWD)

description:
https://www.encodeproject.org/experiments/ENCSR070GAZ/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR070GAZ
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB582KWD
size range: <30

value: tissue

value: Limb from 78 embryonic 15.5 day mice

value: healthy

value: ENCBS735QNY at ENCODE; https://www.encodeproject.org/ENCBS735QNY/


title: ChIP-seq from embryonic facial prominence (ENCLB318FFJ)

description:
https://www.encodeproject.org/experiments/ENCSR137NUN/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K9me3 ChIP-seq on embryonic 15.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR137NUN
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR981PSX
encode release date: 2016-03-17
lab: Bing Ren, UCSD
library encode accession: ENCLB318FFJ
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

value: embryonic facial prominence

value: Embryonic facial prominence from 62 embryonic 15.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS900XQR at ENCODE; https://www.encodeproject.org/ENCBS900XQR/


title: ChIP-seq from forebrain (ENCLB058OKF)

description:
https://www.encodeproject.org/experiments/ENCSR069TDC/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K36me3 ChIP-seq on postnatal 0 day mouse forebrain
experiment encode accession: ENCSR069TDC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR398NCK
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB058OKF
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap forebrain tissue mixed sex postnatal (0 days)

value: forebrain

value: Forebrain of pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS554AAA at ENCODE; https://www.encodeproject.org/ENCBS554AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from liver (ENCLB798QDL)

description:
https://www.encodeproject.org/experiments/ENCSR135QMP/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR135QMP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR082JEN
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB798QDL
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (16.5 days)

value: liver

value: Liver pooled from embyonic 16.5 day mice

value: embryonic

value: ENCBS236CDJ at ENCODE; https://www.encodeproject.org/ENCBS236CDJ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from forebrain (ENCLB916UWH)

description:
https://www.encodeproject.org/experiments/ENCSR069TDC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on postnatal 0 day mouse forebrain
experiment encode accession: ENCSR069TDC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR398NCK
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB916UWH
size range: 300-500

value: tissue

value: Forebrain from 15 postnatal 0 day mice

value: pooled male and female

value: healthy

value: ENCBS038AAA at ENCODE; https://www.encodeproject.org/ENCBS038AAA/


title: ChIP-seq from liver (ENCLB325BOH)

description:
https://www.encodeproject.org/experiments/ENCSR135QMP/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR135QMP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR082JEN
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB325BOH
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

value: Liver from 41 embyonic 16.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS279BWR at ENCODE; https://www.encodeproject.org/ENCBS279BWR/


title: ChIP-seq from forebrain (ENCLB980BAJ)

description:
https://www.encodeproject.org/experiments/ENCSR141ZQF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 16.5 day mouse forebrain
experiment encode accession: ENCSR141ZQF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR587JRQ
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB980BAJ
size range: 300-500

value: forebrain

value: Forebrain pooled from embyonic 16.5 day mice

value: ENCBS156DHU at ENCODE; https://www.encodeproject.org/ENCBS156DHU/


title: ChIP-seq from heart (ENCLB052DQW)

description:
https://www.encodeproject.org/experiments/ENCSR123MLY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 12.5 day mouse heart
experiment encode accession: ENCSR123MLY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR646GHA
encode release date: 2016-04-22
lab: Bing Ren, UCSD
library encode accession: ENCLB052DQW
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (12.5 days)

value: heart

value: ENCBS004ZLN at ENCODE; https://www.encodeproject.org/ENCBS004ZLN/


title: ChIP-seq from embryonic facial prominence (ENCLB622TYD)

description:
https://www.encodeproject.org/experiments/ENCSR195NDO/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR195NDO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR445HBA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB622TYD
size range: 300-500

value: embryonic facial prominence

value: Embryonic facial prominence from 88 embryonic 12.5 day mice

value: ENCBS399GYO at ENCODE; https://www.encodeproject.org/ENCBS399GYO/


title: ChIP-seq from heart (ENCLB450CXC)

description:
https://www.encodeproject.org/experiments/ENCSR123MLY/
***************
biological replicate number: 1
technical replicate number: 2,1
description: H3K27ac ChIP-seq on embryonic 12.5 day mouse heart
experiment encode accession: ENCSR123MLY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR646GHA
encode release date: 2016-04-22
lab: Bing Ren, UCSD
library encode accession: ENCLB450CXC
size range: 300-500

value: Heart from 12.5 day mice

value: embryonic

value: ENCBS452TDN at ENCODE; https://www.encodeproject.org/ENCBS452TDN/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from neural tube (ENCLB703HNI)

description:
https://www.encodeproject.org/experiments/ENCSR138YZB/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on embryonic 11.5 day mouse neural tube
experiment encode accession: ENCSR138YZB
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB703HNI
size range: 300-500

value: Control

value: neural tube

value: tissue

value: Neural tube from 109 embyronic 11.5 day mice

value: pooled male and female

value: healthy

value: ENCBS402TUS at ENCODE; https://www.encodeproject.org/ENCBS402TUS/


title: ChIP-seq from midbrain (ENCLB962THQ)

description:
https://www.encodeproject.org/experiments/ENCSR068XYW/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse midbrain
experiment encode accession: ENCSR068XYW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR817FFF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB962THQ
size range: 300-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (16.5 days)

value: midbrain

value: Midbrain pooled from embyonic 16.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS684MLE at ENCODE; https://www.encodeproject.org/ENCBS684MLE/


title: WGBS from liver (ENCLB172BSB)

description:
https://www.encodeproject.org/experiments/ENCSR129SBE/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR129SBE
assay title: WGBS
assembly: mm10
encode release date: 2014-12-17
lab: Joe Ecker, Salk
library encode accession: ENCLB172BSB
size range: 180-500

extract_protocol:
general protocol: https://www.encodeproject.org/documents/665c8f16-3724-4ab7-aa29-688f396bcd4f/@@download/attachment/Ecker_Protocol_Summary.png
general protocol: https://www.encodeproject.org/documents/862389c9-38b6-4e76-8b84-d82fb9a4c6cf/@@download/attachment/Ecker_Replication_Summary.png
extraction method: Qiagen DNeasy Blood and Tissue Kit
general protocol: https://www.encodeproject.org/documents/9d5f346e-88d3-45e2-b28a-2b26f537490f/@@download/attachment/Ecker_Methyl_protocol_v030114.pdf

value: liver

value: Liver from 41 embyonic 16.5 day mice

value: ENCBS279BWR at ENCODE; https://www.encodeproject.org/ENCBS279BWR/


title: ChIP-seq from liver (ENCLB941EJL)

description:
https://www.encodeproject.org/experiments/ENCSR133EGP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse liver
experiment encode accession: ENCSR133EGP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR274AQL
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB941EJL
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (15.5 days)

value: Liver from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS966PAM at ENCODE; https://www.encodeproject.org/ENCBS966PAM/


title: ChIP-seq from midbrain (ENCLB192EDY)

description:
https://www.encodeproject.org/experiments/ENCSR068XYW/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse midbrain
experiment encode accession: ENCSR068XYW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR817FFF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB192EDY
size range: 300-500

value: Midbrain from 37 embryonic 16.5 day mice

value: ENCBS463JSE at ENCODE; https://www.encodeproject.org/ENCBS463JSE/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from liver (ENCLB483WAL)

description:
https://www.encodeproject.org/experiments/ENCSR129SBE/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR129SBE
assay title: WGBS
assembly: mm10
encode release date: 2014-12-17
lab: Joe Ecker, Salk
library encode accession: ENCLB483WAL
size range: 180-500

value: tissue

value: Liver pooled from embyonic 16.5 day mice

value: ENCBS236CDJ at ENCODE; https://www.encodeproject.org/ENCBS236CDJ/


title: ChIP-seq from heart (ENCLB640QOY)

description:
https://www.encodeproject.org/experiments/ENCSR122HLY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 12.5 day mouse heart
experiment encode accession: ENCSR122HLY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR646GHA
encode release date: 2016-04-22
lab: Bing Ren, UCSD
library encode accession: ENCLB640QOY
size range: 300-500

value: heart

value: Heart from 12.5 day mice

value: pooled male and female

value: healthy

value: ENCBS452TDN at ENCODE; https://www.encodeproject.org/ENCBS452TDN/


title: ChIP-seq from midbrain (ENCLB785HLL)

description:
https://www.encodeproject.org/experiments/ENCSR067FKP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 14.5 day mouse midbrain
experiment encode accession: ENCSR067FKP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR413VHH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB785HLL
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue mixed sex embryo (14.5 days)

value: midbrain

value: Midbrain from 34 embryonic 14.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS015AAA at ENCODE; https://www.encodeproject.org/ENCBS015AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: WGBS from liver (ENCLB491SEA)

description:
https://www.encodeproject.org/experiments/ENCSR129SBE/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR129SBE
assay title: WGBS
assembly: mm10
encode release date: 2014-12-17
lab: Joe Ecker, Salk
library encode accession: ENCLB491SEA
size range: 180-500

value: liver

value: embryonic


title: ChIP-seq from heart (ENCLB957WNC)

description:
https://www.encodeproject.org/experiments/ENCSR122HLY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 12.5 day mouse heart
experiment encode accession: ENCSR122HLY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR646GHA
encode release date: 2016-04-22
lab: Bing Ren, UCSD
library encode accession: ENCLB957WNC
size range: 300-500

value: ENCBS004ZLN at ENCODE; https://www.encodeproject.org/ENCBS004ZLN/


title: ChIP-seq from midbrain (ENCLB562PTL)

description:
https://www.encodeproject.org/experiments/ENCSR067FKP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 14.5 day mouse midbrain
experiment encode accession: ENCSR067FKP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR413VHH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB562PTL
size range: 300-500

value: Midbrain from 24 embryonic 14.5 day mice

value: ENCBS003AAA at ENCODE; https://www.encodeproject.org/ENCBS003AAA/


title: ChIP-seq from hindbrain (ENCLB211YTX)

description:
https://www.encodeproject.org/experiments/ENCSR066XXZ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 14.5 day mouse hindbrain
experiment encode accession: ENCSR066XXZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR896PWV
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB211YTX
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex embryo (14.5 days)

value: hindbrain

value: tissue

value: Hindbrain from 34 embryonic 14.5 day mice

value: ENCBS016AAA at ENCODE; https://www.encodeproject.org/ENCBS016AAA/


title: ChIP-seq from hindbrain (ENCLB580DKC)

description:
https://www.encodeproject.org/experiments/ENCSR066XXZ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 14.5 day mouse hindbrain
experiment encode accession: ENCSR066XXZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR896PWV
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB580DKC
size range: 300-500

value: Hindbrain from 24 embryonic 14.5 day mice

value: pooled male and female

value: ENCBS004AAA at ENCODE; https://www.encodeproject.org/ENCBS004AAA/


title: WGBS from liver (ENCLB738AUJ)

description:
https://www.encodeproject.org/experiments/ENCSR129SBE/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR129SBE
assay title: WGBS
assembly: mm10
encode release date: 2014-12-17
lab: Joe Ecker, Salk
library encode accession: ENCLB738AUJ
size range: 180-500

value: Liver from 41 embyonic 16.5 day mice

value: healthy

value: ENCBS279BWR at ENCODE; https://www.encodeproject.org/ENCBS279BWR/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from liver (ENCLB611DHF)

description:
https://www.encodeproject.org/experiments/ENCSR110MSZ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 12.5 day mouse liver
experiment encode accession: ENCSR110MSZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR680ZSE
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB611DHF
size range: 300-500

value: Liver from 120 embryonic 12.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS236ISK at ENCODE; https://www.encodeproject.org/ENCBS236ISK/


title: WGBS from kidney (ENCLB621QWS)

description:
https://www.encodeproject.org/experiments/ENCSR128HOP/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on postnatal 0 day mouse kidney
experiment encode accession: ENCSR128HOP
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB621QWS
size range: 180-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap kidney tissue mixed sex postnatal (0 days)

value: kidney

value: Kidney from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS562AAA at ENCODE; https://www.encodeproject.org/ENCBS562AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from hindbrain (ENCLB837HOC)

description:
https://www.encodeproject.org/experiments/ENCSR129LAP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 11.5 day mouse hindbrain
experiment encode accession: ENCSR129LAP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR563WKD
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB837HOC
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (11.5 days)

value: hindbrain

value: tissue

value: Hindbrain from 109 embyronic 11.5 day mice

value: embryonic

value: ENCBS199NDR at ENCODE; https://www.encodeproject.org/ENCBS199NDR/


title: ChIP-seq from embryonic facial prominence (ENCLB890ZKF)

description:
https://www.encodeproject.org/experiments/ENCSR106QSU/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR106QSU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR445HBA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB890ZKF
size range: 300-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (12.5 days)

value: embryonic facial prominence

value: Embryonic facial prominence from 88 embryonic 12.5 day mice

value: pooled male and female

value: healthy

value: ENCBS399GYO at ENCODE; https://www.encodeproject.org/ENCBS399GYO/


title: ChIP-seq from hindbrain (ENCLB910IWY)

description:
https://www.encodeproject.org/experiments/ENCSR129LAP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 11.5 day mouse hindbrain
experiment encode accession: ENCSR129LAP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR563WKD
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB910IWY
size range: 300-500

value: Hindbrain from 88 embyronic 11.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS976DPO at ENCODE; https://www.encodeproject.org/ENCBS976DPO/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from embryonic facial prominence (ENCLB558LEB)

description:
https://www.encodeproject.org/experiments/ENCSR105OGF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR105OGF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR445HBA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB558LEB
size range: 300-500

value: Embryonic facial prominence from 120 embryonic 12.5 day mice

value: ENCBS047UII at ENCODE; https://www.encodeproject.org/ENCBS047UII/


title: ChIP-seq from hindbrain (ENCLB325BSY)

description:
https://www.encodeproject.org/experiments/ENCSR066XFL/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 15.5 day mouse hindbrain
experiment encode accession: ENCSR066XFL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685UUM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB325BSY
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (15.5 days)

value: Hindbrain from 62 embryonic 15.5 day mice

value: ENCBS948UKU at ENCODE; https://www.encodeproject.org/ENCBS948UKU/


title: ChIP-seq from hindbrain (ENCLB301ZRZ)

description:
https://www.encodeproject.org/experiments/ENCSR066XFL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 15.5 day mouse hindbrain
experiment encode accession: ENCSR066XFL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685UUM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB301ZRZ
size range: 300-500

value: hindbrain

value: tissue

value: Hindbrain from 78 embryonic 15.5 day mice

value: ENCBS958AHU at ENCODE; https://www.encodeproject.org/ENCBS958AHU/


title: WGBS from kidney (ENCLB690LFQ)

description:
https://www.encodeproject.org/experiments/ENCSR128HOP/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on postnatal 0 day mouse kidney
experiment encode accession: ENCSR128HOP
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB690LFQ
size range: 180-500

value: kidney

value: Kidney from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS046AAA at ENCODE; https://www.encodeproject.org/ENCBS046AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from midbrain (ENCLB487YDA)

description:
https://www.encodeproject.org/experiments/ENCSR066WUD/
***************
biological replicate number: 1
technical replicate number: 2,1
description: H3K36me3 ChIP-seq on embryonic 13.5 day mouse midbrain
experiment encode accession: ENCSR066WUD
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR359ETU
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB487YDA
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (13.5 days)

value: midbrain

value: Midbrain from embryonic 13.5 day mice

value: embryonic

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS185VNZ at ENCODE; https://www.encodeproject.org/ENCBS185VNZ/


title: WGBS from kidney (ENCLB100NJC)

description:
https://www.encodeproject.org/experiments/ENCSR128HOP/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on postnatal 0 day mouse kidney
experiment encode accession: ENCSR128HOP
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB100NJC
size range: 180-500


title: ChIP-seq from embryonic facial prominence (ENCLB318MVC)

description:
https://www.encodeproject.org/experiments/ENCSR105OGF/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR105OGF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR445HBA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB318MVC
size range: 300-500

value: embryonic facial prominence

value: Embryonic facial prominence from 88 embryonic 12.5 day mice

value: ENCBS399GYO at ENCODE; https://www.encodeproject.org/ENCBS399GYO/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from midbrain (ENCLB330ZRX)

description:
https://www.encodeproject.org/experiments/ENCSR066WUD/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K36me3 ChIP-seq on embryonic 13.5 day mouse midbrain
experiment encode accession: ENCSR066WUD
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR359ETU
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB330ZRX
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

value: tissue

value: ENCBS725LVX at ENCODE; https://www.encodeproject.org/ENCBS725LVX/


title: ChIP-seq from liver (ENCLB947JXU)

description:
https://www.encodeproject.org/experiments/ENCSR136GMT/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 12.5 day mouse liver
experiment encode accession: ENCSR136GMT
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR680ZSE
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB947JXU
size range: 300-500

value: liver

value: Liver from 120 embryonic 12.5 day mice

value: ENCBS236ISK at ENCODE; https://www.encodeproject.org/ENCBS236ISK/


title: ChIP-seq from liver (ENCLB977UJO)

description:
https://www.encodeproject.org/experiments/ENCSR125VVG/
***************
biological replicate number: 1
technical replicate number: 1,3,2
description: H3K9me3 ChIP-seq on embryonic 14.5 day mouse liver
experiment encode accession: ENCSR125VVG
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742WLX
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB977UJO
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

source_name: Mus musculus strain B6NTac;B6NCrl/Lap liver tissue mixed sex embryo (14.5 days)

value: Liver from embryonic 14.5 day mice

value: ENCBS194VTP at ENCODE; https://www.encodeproject.org/ENCBS194VTP/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from midbrain (ENCLB809DCO)

description:
https://www.encodeproject.org/experiments/ENCSR104PWP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR104PWP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR415FCU
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB809DCO
size range: 300-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (12.5 days)

value: midbrain

value: Midbrain from 88 embryonic 12.5 day mice

value: embryonic

value: ENCBS280TPA at ENCODE; https://www.encodeproject.org/ENCBS280TPA/


title: ChIP-seq from midbrain (ENCLB406ZCD)

description:
https://www.encodeproject.org/experiments/ENCSR104PWP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR104PWP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR415FCU
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB406ZCD
size range: 300-500

value: Midbrain from 120 embryonic 12.5 day mice

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS309WCU at ENCODE; https://www.encodeproject.org/ENCBS309WCU/


title: ChIP-seq from embryonic facial prominence (ENCLB649ZOO)

description:
https://www.encodeproject.org/experiments/ENCSR106QSU/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR106QSU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR445HBA
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB649ZOO
size range: 300-500

value: embryonic facial prominence

value: tissue

value: Embryonic facial prominence from 120 embryonic 12.5 day mice

value: ENCBS047UII at ENCODE; https://www.encodeproject.org/ENCBS047UII/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB575TVM)

description:
https://www.encodeproject.org/experiments/ENCSR122CJZ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR122CJZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2016-02-17
lab: Bing Ren, UCSD
library encode accession: ENCLB575TVM
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (16.5 days)

value: heart

value: Heart from 41 embyonic 16.5 day mice

value: ENCBS217XWR at ENCODE; https://www.encodeproject.org/ENCBS217XWR/


title: ChIP-seq from hindbrain (ENCLB122ARS)

description:
https://www.encodeproject.org/experiments/ENCSR066SPF/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse hindbrain
experiment encode accession: ENCSR066SPF
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB122ARS
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex postnatal (0 days)

value: Control

value: hindbrain

value: Hindbrain from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS040AAA at ENCODE; https://www.encodeproject.org/ENCBS040AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: WGBS from kidney (ENCLB663RFJ)

description:
https://www.encodeproject.org/experiments/ENCSR128HOP/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on postnatal 0 day mouse kidney
experiment encode accession: ENCSR128HOP
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB663RFJ
size range: 180-500

value: kidney

value: Kidney from pooled postnatal 0 day mice

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS562AAA at ENCODE; https://www.encodeproject.org/ENCBS562AAA/


title: ChIP-seq from neural tube (ENCLB025MNR)

description:
https://www.encodeproject.org/experiments/ENCSR094QZC/
***************
biological replicate number: 1
technical replicate number: 2,1
description: H3K36me3 ChIP-seq on embryonic 12.5 day mouse neural tube
experiment encode accession: ENCSR094QZC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR991FSR
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB025MNR
size range: 300-500

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (12.5 days)

value: neural tube

value: tissue

value: Neural tube from 120 embryonic 12.5 day mice

value: embryonic

value: ENCBS405OOH at ENCODE; https://www.encodeproject.org/ENCBS405OOH/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from neural tube (ENCLB273VSI)

description:
https://www.encodeproject.org/experiments/ENCSR094QZC/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 12.5 day mouse neural tube
experiment encode accession: ENCSR094QZC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR991FSR
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB273VSI
size range: 300-500

value: Neural tube from 88 embryonic 12.5 day mice

value: ENCBS254TSW at ENCODE; https://www.encodeproject.org/ENCBS254TSW/


title: ChIP-seq from heart (ENCLB256YJC)

description:
https://www.encodeproject.org/experiments/ENCSR077QRY/
***************
biological replicate number: 2
technical replicate number: 1,2
description: Control ChIP-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR077QRY
assay title: ChIP-seq
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB256YJC
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (13.5 days)

value: Control

value: heart

value: Heart from embryonic 13.5 day mice

value: ENCBS814PLT at ENCODE; https://www.encodeproject.org/ENCBS814PLT/


title: ChIP-seq from liver (ENCLB587ACV)

description:
https://www.encodeproject.org/experiments/ENCSR110MSZ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 12.5 day mouse liver
experiment encode accession: ENCSR110MSZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR680ZSE
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB587ACV
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (12.5 days)

value: liver

value: Liver from 88 embryonic 12.5 day mice

value: ENCBS479VPX at ENCODE; https://www.encodeproject.org/ENCBS479VPX/


title: ChIP-seq from stomach (ENCLB399CCA)

description:
https://www.encodeproject.org/experiments/ENCSR064DGY/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse stomach
experiment encode accession: ENCSR064DGY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR497YBQ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB399CCA
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap stomach tissue mixed sex embryo (14.5 days)

value: stomach

value: Stomach pooled from embryonic 14.5 day mice

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS564AAA at ENCODE; https://www.encodeproject.org/ENCBS564AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from heart (ENCLB710HXQ)

description:
https://www.encodeproject.org/experiments/ENCSR077QRY/
***************
biological replicate number: 1
technical replicate number: 1,2,3
description: Control ChIP-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR077QRY
assay title: ChIP-seq
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB710HXQ
size range: 300-500

value: tissue

value: embryonic

value: ENCBS490ZWZ at ENCODE; https://www.encodeproject.org/ENCBS490ZWZ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from stomach (ENCLB399BGP)

description:
https://www.encodeproject.org/experiments/ENCSR064DGY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse stomach
experiment encode accession: ENCSR064DGY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR497YBQ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB399BGP
size range: 300-500

value: ENCBS568AAA at ENCODE; https://www.encodeproject.org/ENCBS568AAA/


title: ChIP-seq from neural tube (ENCLB946BFN)

description:
https://www.encodeproject.org/experiments/ENCSR107SLP/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K36me3 ChIP-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR107SLP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR295GGT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB946BFN
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (13.5 days)

value: neural tube

value: Neural tube from embryonic 13.5 day mice

value: ENCBS549OYR at ENCODE; https://www.encodeproject.org/ENCBS549OYR/


title: ChIP-seq from hindbrain (ENCLB205FCD)

description:
https://www.encodeproject.org/experiments/ENCSR110TIW/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 16.5 day mouse hindbrain
experiment encode accession: ENCSR110TIW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR752KDM
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB205FCD
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (16.5 days)

value: hindbrain

value: Hindbrain from 37 embryonic 16.5 day mice

value: ENCBS281ZLI at ENCODE; https://www.encodeproject.org/ENCBS281ZLI/


title: ChIP-seq from hindbrain (ENCLB512IST)

description:
https://www.encodeproject.org/experiments/ENCSR066SPF/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse hindbrain
experiment encode accession: ENCSR066SPF
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB512IST
size range: 300-500

value: Control

value: Hindbrain from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS556AAA at ENCODE; https://www.encodeproject.org/ENCBS556AAA/


title: ChIP-seq from embryonic facial prominence (ENCLB906CIG)

description:
https://www.encodeproject.org/experiments/ENCSR061DPP/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR061DPP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR981PSX
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB906CIG
size range: 300-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (15.5 days)

value: embryonic facial prominence

value: Embryonic facial prominence from 78 embryonic 15.5 day mice

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS543BPM at ENCODE; https://www.encodeproject.org/ENCBS543BPM/


title: ChIP-seq from embryonic facial prominence (ENCLB179PKT)

description:
https://www.encodeproject.org/experiments/ENCSR061DPP/
***************
biological replicate number: 2
technical replicate number: 2,1
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR061DPP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR981PSX
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB179PKT
size range: 300-500

value: tissue

value: Embryonic facial prominence from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS900XQR at ENCODE; https://www.encodeproject.org/ENCBS900XQR/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from intestine (ENCLB063SWG)

description:
https://www.encodeproject.org/experiments/ENCSR100DLL/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 16.5 day mouse intestine
experiment encode accession: ENCSR100DLL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR635JIC
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB063SWG
size range: 300-500

source_name: Mus musculus strain B6NCrl intestine tissue mixed sex embryo (16.5 days)

value: intestine

value: Intestine from 41 embyonic 16.5 day mice

value: ENCBS072GMU at ENCODE; https://www.encodeproject.org/ENCBS072GMU/


title: ChIP-seq from intestine (ENCLB594SYU)

description:
https://www.encodeproject.org/experiments/ENCSR100DLL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 16.5 day mouse intestine
experiment encode accession: ENCSR100DLL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR635JIC
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB594SYU
size range: 300-500

value: Intestine pooled from embyonic 16.5 day mice

value: ENCBS856EWN at ENCODE; https://www.encodeproject.org/ENCBS856EWN/


title: ChIP-seq from neural tube (ENCLB733BHD)

description:
https://www.encodeproject.org/experiments/ENCSR065CJC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 12.5 day mouse neural tube
experiment encode accession: ENCSR065CJC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR991FSR
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB733BHD
size range: 300-500

value: neural tube

value: Neural tube from 120 embryonic 12.5 day mice

value: ENCBS405OOH at ENCODE; https://www.encodeproject.org/ENCBS405OOH/


title: ChIP-seq from embryonic facial prominence (ENCLB811OGE)

description:
https://www.encodeproject.org/experiments/ENCSR059LYY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 14.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR059LYY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR329ZEN
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB811OGE
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap embryonic facial prominence tissue mixed sex embryo (14.5 days)

value: embryonic facial prominence

value: Craniofacial prominence from 34 embryonic 14.5 day mice

value: pooled male and female

value: ENCBS024AAA at ENCODE; https://www.encodeproject.org/ENCBS024AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: WGBS from limb (ENCLB725HOC)

description:
https://www.encodeproject.org/experiments/ENCSR099RYD/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 14.5 day mouse limb
experiment encode accession: ENCSR099RYD
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB725HOC
size range: 180-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap limb tissue mixed sex embryo (14.5 days)

value: limb

value: tissue

value: Limb from 34 embryonic 14.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS023AAA at ENCODE; https://www.encodeproject.org/ENCBS023AAA/


title: ChIP-seq from heart (ENCLB059KQC)

description:
https://www.encodeproject.org/experiments/ENCSR122CJZ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR122CJZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2016-02-17
lab: Bing Ren, UCSD
library encode accession: ENCLB059KQC
size range: 300-500

value: heart

value: Heart pooled from embyonic 16.5 day mice

value: embryonic

value: ENCBS955JPC at ENCODE; https://www.encodeproject.org/ENCBS955JPC/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from limb (ENCLB968GIB)

description:
https://www.encodeproject.org/experiments/ENCSR099RYD/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 14.5 day mouse limb
experiment encode accession: ENCSR099RYD
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB968GIB
size range: 180-500

value: Limb from 24 embryonic 14.5 day mice

value: ENCBS011AAA at ENCODE; https://www.encodeproject.org/ENCBS011AAA/


title: ChIP-seq from hindbrain (ENCLB437POJ)

description:
https://www.encodeproject.org/experiments/ENCSR014MXQ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 12.5 day mouse hindbrain
experiment encode accession: ENCSR014MXQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR659EZI
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB437POJ
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (12.5 days)

value: hindbrain

value: Hindbrain from 88 embryonic 12.5 day mice

value: ENCBS022IBY at ENCODE; https://www.encodeproject.org/ENCBS022IBY/


title: ChIP-seq from embryonic facial prominence (ENCLB822FYZ)

description:
https://www.encodeproject.org/experiments/ENCSR059LYY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 14.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR059LYY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR329ZEN
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB822FYZ
size range: 300-500

value: embryonic facial prominence

value: Craniofacial prominence from 24 embryonic 14.5 day mice

value: pooled male and female

value: ENCBS012AAA at ENCODE; https://www.encodeproject.org/ENCBS012AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from kidney (ENCLB629QYJ)

description:
https://www.encodeproject.org/experiments/ENCSR057SHA/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 14.5 day mouse kidney
experiment encode accession: ENCSR057SHA
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR091DHJ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB629QYJ
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap kidney tissue mixed sex embryo (14.5 days)

value: kidney

value: tissue

value: Kidney from pooled embryonic 14.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS569AAA at ENCODE; https://www.encodeproject.org/ENCBS569AAA/


title: WGBS from limb (ENCLB609ALC)

description:
https://www.encodeproject.org/experiments/ENCSR099RYD/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 14.5 day mouse limb
experiment encode accession: ENCSR099RYD
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB609ALC
size range: 180-500

value: limb

value: embryonic


title: ChIP-seq from kidney (ENCLB499AJJ)

description:
https://www.encodeproject.org/experiments/ENCSR057SHA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 14.5 day mouse kidney
experiment encode accession: ENCSR057SHA
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR091DHJ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB499AJJ
size range: 300-500

value: ENCBS565AAA at ENCODE; https://www.encodeproject.org/ENCBS565AAA/


title: ChIP-seq from heart (ENCLB519AJL)

description:
https://www.encodeproject.org/experiments/ENCSR098USP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR098USP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR077QRY
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB519AJL
size range: 300-500

value: heart

value: Heart from embryonic 13.5 day mice

value: ENCBS814PLT at ENCODE; https://www.encodeproject.org/ENCBS814PLT/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB741EPY)

description:
https://www.encodeproject.org/experiments/ENCSR098USP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR098USP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR077QRY
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB741EPY
size range: 300-500

value: ENCBS490ZWZ at ENCODE; https://www.encodeproject.org/ENCBS490ZWZ/


title: ChIP-seq from embryonic facial prominence (ENCLB383CLT)

description:
https://www.encodeproject.org/experiments/ENCSR057BKH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 13.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR057BKH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742ZUI
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB383CLT
size range: 300-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (13.5 days)

value: embryonic facial prominence

value: Embryonic facial prominence from embryonic 13.5 day mice

value: pooled male and female

value: ENCBS764ZZN at ENCODE; https://www.encodeproject.org/ENCBS764ZZN/


title: ChIP-seq from hindbrain (ENCLB205VUS)

description:
https://www.encodeproject.org/experiments/ENCSR014MXQ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 12.5 day mouse hindbrain
experiment encode accession: ENCSR014MXQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR659EZI
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB205VUS
size range: 300-500

value: hindbrain

value: tissue

value: Hindbrain from 120 embryonic 12.5 day mice

value: ENCBS406RIE at ENCODE; https://www.encodeproject.org/ENCBS406RIE/


title: ChIP-seq from hindbrain (ENCLB927MBA)

description:
https://www.encodeproject.org/experiments/ENCSR054JHZ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 14.5 day mouse hindbrain
experiment encode accession: ENCSR054JHZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR896PWV
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB927MBA
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex embryo (14.5 days)

value: Hindbrain from 24 embryonic 14.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS004AAA at ENCODE; https://www.encodeproject.org/ENCBS004AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from hindbrain (ENCLB805EEN)

description:
https://www.encodeproject.org/experiments/ENCSR054JHZ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 14.5 day mouse hindbrain
experiment encode accession: ENCSR054JHZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR896PWV
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB805EEN
size range: 300-500

value: Hindbrain from 34 embryonic 14.5 day mice

value: embryonic

value: ENCBS016AAA at ENCODE; https://www.encodeproject.org/ENCBS016AAA/


title: ChIP-seq from embryonic facial prominence (ENCLB519AWV)

description:
https://www.encodeproject.org/experiments/ENCSR057BKH/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 13.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR057BKH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742ZUI
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB519AWV
size range: 300-500

value: ENCBS847MIW at ENCODE; https://www.encodeproject.org/ENCBS847MIW/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from neural tube (ENCLB570DKB)

description:
https://www.encodeproject.org/experiments/ENCSR065CJC/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 12.5 day mouse neural tube
experiment encode accession: ENCSR065CJC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR991FSR
encode release date: 2016-03-30
lab: Bing Ren, UCSD
library encode accession: ENCLB570DKB
size range: 300-500

value: neural tube

value: Neural tube from 88 embryonic 12.5 day mice

value: ENCBS254TSW at ENCODE; https://www.encodeproject.org/ENCBS254TSW/


title: ChIP-seq from heart (ENCLB716WWF)

description:
https://www.encodeproject.org/experiments/ENCSR052CDF/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR052CDF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR840PFW
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB716WWF
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex embryo (14.5 days)

value: heart

value: Heart from pooled embryonic 14.5 day mice

value: pooled male and female

value: ENCBS566AAA at ENCODE; https://www.encodeproject.org/ENCBS566AAA/


title: ChIP-seq from liver (ENCLB396KIL)

description:
https://www.encodeproject.org/experiments/ENCSR095FDG/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR095FDG
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR082JEN
encode release date: 2016-02-17
lab: Bing Ren, UCSD
library encode accession: ENCLB396KIL
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (16.5 days)

value: liver

value: tissue

value: Liver pooled from embyonic 16.5 day mice

value: ENCBS236CDJ at ENCODE; https://www.encodeproject.org/ENCBS236CDJ/


title: ChIP-seq from intestine (ENCLB637XID)

description:
https://www.encodeproject.org/experiments/ENCSR051CUH/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse intestine
experiment encode accession: ENCSR051CUH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR872UEE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB637XID
size range: 300-500

source_name: Mus musculus strain B6NCrl intestine tissue mixed sex embryo (15.5 days)

value: intestine

value: Intestine from 62 embryonic 15.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS836WEU at ENCODE; https://www.encodeproject.org/ENCBS836WEU/


title: ChIP-seq from forebrain (ENCLB389UKO)

description:
https://www.encodeproject.org/experiments/ENCSR066LZB/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 11.5 day mouse forebrain
experiment encode accession: ENCSR066LZB
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR024JAN
encode release date: 2014-07-07
lab: Bing Ren, UCSD
library encode accession: ENCLB389UKO
size range: 300-500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (11.5 days)

value: forebrain

value: Forebrain from 109 embyronic 11.5 day mice

value: embryonic

value: ENCBS745VOM at ENCODE; https://www.encodeproject.org/ENCBS745VOM/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from stomach (ENCLB581WIH)

description:
https://www.encodeproject.org/experiments/ENCSR050VUZ/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse stomach
experiment encode accession: ENCSR050VUZ
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB581WIH
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap stomach tissue mixed sex postnatal (0 days)

value: Control

value: stomach

value: Stomach from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS561AAA at ENCODE; https://www.encodeproject.org/ENCBS561AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from stomach (ENCLB403XGT)

description:
https://www.encodeproject.org/experiments/ENCSR050VUZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse stomach
experiment encode accession: ENCSR050VUZ
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB403XGT
size range: 300-500

value: tissue

value: Stomach from 15 postnatal 0 day mice

value: pooled male and female

value: ENCBS045AAA at ENCODE; https://www.encodeproject.org/ENCBS045AAA/