title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mdm4 knockdown (T0305), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GCGCAATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcm2 knockdown (T0316), replicate 1

status: Public on Feb 02 2017

type: SRA

city: Toronto

first: Ulrich

last: Braunschweig

state: Ontario

address: 160 College Street

department: Donnelly Centre

country: Canada

institute: University of Toronto

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTCCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab

library_source: transcriptomic

data_processing:
CASAVA 1.8 was used for base calling.
Fastq files contain demultiplexed reads which were assigned to the appropriate treatment by matching to expected forward and reverse barcodes (sequenced in dedicated reads; not supplied).
Forward and reverse event reads were mapped to custom junction libraries representing all expected splice variants (supplied as processed files), using bowtie with settings --best -v 3 -k 1 --trim3 26 --trim5 20. Trimming was done to remove lower-quality, uninformative ends and because forward reads had a missing base call at position 11 due to a power outage. Junction libraries were first constructed from NCBIm37/mm9 gene annotations, and then refined based on the results of de novo mapping of the reads from one full Illumina lane from each cell line using tophat (default settings with -i 40 and providing Ensembl transcript annotations for NCBIm37), after quality trimming (minimum MAPQ of 33) from the 3'-end with the fastx toolkit. Mapped reads were counted per junction.
Alternative splicing analysis: Percent-spliced-in (PSI) values were calculated for each alternative exon, or part thereof in the case of alternative 5'-/3'-splice sites ('event'), from read tallies as follows: PSI was calculated independently from forward and reverse reads as the percentage of reads supporting inclusion divided by the total number of reads for the event. For alternative 5'/3'-ss events that were part of an alternative exon (Foxm1.A2, Mta1.A1, Uspl1.A3), the PSI was instead calculated with reference to the total reads supporting inclusion of that exon in order to assess independent regulation of alternative splice site usage. Only the read direction in which all reads unambiguously supported either inclusion or exclusion of an event was used, and the average if that applied for both. Exploratory analysis revealed that PSI values showed low-level batch effects per 96-well plate which we moderated by subtracting a weighted plate median in which negative controls (siNT and mock treatment) were given 20x more weight than other samples. To derive variances, and because PSI values are not nearly normally distributed but roughly follow a beta distribution, we elected to fit a beta distribution to each pair of replicate treatments, as well as to all negative controls from both replicates, using maximum-likelihood fitting as implemented in the fitdistr() function from the R package MASS {Venables & Ripley, Modern Applied Statistics with S (2002)}. Iterative optimization of shape parameters was initiated with settings x=PSI, shape1=1, shape2=1, method=”L-BFGS-B”, lower=0.01, and upper=mean number of reads supporting each PSI value. A modified Strictly Standardized Mean Difference (SSMD {Zhang, Genomics (2007)}) was then calculated based on the formula: SSMD = (μt – μc)/SQRT(vart + varc) where μt and μc are the means (corresponding to the PSI), and vart and varc the variances of the beta distributions fitted to the treatment replicates and negative controls, respectively. Events for which not all reads from at least one direction were informative (Mff.A2, Tead1.A2) were excluded from further analysis, as were events in individual treatments with less than 20 reads in one or both replicates (~9% of all event x treatment combinations). Additionally, the following events were removed from further splicing analysis: expression only events or constitutive exons, Fgf4, Gapdh, Srpk2, Srrm4; events with consistently low read counts: Atg13.A1, H2afy.A2, Tcf7l1 (N2A only), Dnmt3b (N2A only); or because measured inclusion was biased by differential length of isoforms:, Fgfr1, Sall4.
Expression analysis: Read counts from all splice variants of each gene were used to estimate relative mRNA expression levels, reads per million reads (RPMs). Differential expression analysis based on raw read counts was performed using the generalized linear models workflow from the R package edgeR. Plate, position (edge/interior) and treatment were used as design factors (where all treatments of each type of control were treated as replicates.) Models fitted using estimateDisp() to estimate the common, trended, and tag-wise dispersion for the CGR8 and N2A data separately. Subsequently, differences attributable to treatment, plate, or position contrasts were extracted with glmLRT() and represented as log2-fold changes with associated FDR. Fold-changes for treatments are relative to the siNT and mock-treatment controls.
Genome_build: NCBIm37/mm9
Supplementary_files_format_and_content: Processed files are either tab-delimited  tables (.tab) or FASTA files (.fa). KnockdownAnnotation.tab contains treatment annotations and well/plate positions. ScreenJuncUp.20-77.tab and ScreenJuncDn.20-77.tab contain the custom junction upstream and downstram junction libraries, respectively, and ScreenEvent_junctions.tab contains the information which junctions were used to calculate PSI for each event. PSI.SSMD.CGR8.tab and PSI.SSMD.N2A.tab contain raw PSI of each replicate and final SSMD. Reads_perEvent_CGR8.tab and Reads_perEvent_N2A.tab contain raw read counts on which expression analyis was based, and Expression.CGR8.treatments.tab and Expression.N2A.treatments.tab contain modeled relative abundance and fold-change with associated FDR for each treatment type.

molecule: total RNA

organism: Mus musculus

source_name: Embryonic stem cells

growth_protocol: CGR8 mouse embryonic stem cells (ESCs) were cultured as described previously on gelatin-coated plates (Gabut et al., Cell (2011), Han  et al., Nature (2013)). Mouse neuroblastoma (N2A) cells were grown in DMEM supplemented with 10% FBS, sodium pyruvate, MEM non-essential amino acids, and penicillin/streptomycin. All cell lines were maintained at 37°C with 5% CO2.

extract_protocol:
Forty-eight hours post-transfection, total RNA were purified from cultured cells using RNeasy Plus 96 Kit (Qiagen), as per the manufacturer’s instructions.
For each sample, a multiplex RT-PCR assay was first applied to simultaneously amplify 50 AS and/or expression events in a single reaction. The multiplex RT-PCR reaction was carried out in 96-well plates using the OneStep RT-PCR kit (Qiagen) as recommended by the manufacturer, with the following changes: reactions were performed in a volume of 20 uL with 2 uL of the purified total RNA as input, and a mixture of 50 pairs of primers was added to each reaction with a final concentration of 0.25 uM for each individual forward and reverse primer. Four identical Veriti 96-well Thermal Cyclers (Applied Biosystems) were used with the following conditions: 50°C for 30 minutes, 95°C for 15 minute, 30 cycles of 94°C for 40 seconds, 58°C for 1 minute (slow ramp rate), 72°C for 3 minutes, and a final extension step at 72°C for 10 minutes. Two sets of barcodes were incorporated into forward and reverse primers, respectively, after the universal adaptors and added to the amplicons in the second PCR reaction to allow demultiplexing all reads that were derived from a particular treatment. Primers sequences were: forward primer, AATGATACGGCGACCACCGAGATCTACACNNNNNNNNACACTCTTTCCCTACACGACGCTCTTCCGATCT (N denotes i5 barcode); reverse primer, CAAGCAGAAGACGGCATACGAGATNNNNNNNNGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT (N denotes i7 primer). The second PCR was performed using Phusion High-Fidelity DNA Polymerase (Thermo Scientific), as per the manufacturer’s instructions. For each 20 uL of reaction, 1 uL of the multiplex RT-PCR reaction products was used as templates. The thermal cycling conditions were as follows: 98°C for 30 seconds, 15 cycles of 98°C for 10 seconds, 65°C for 30 seconds, 72°C for 30 seconds, and a final extension step at 72°C for 5 minutes. The resulting libraries were pooled and sequenced.

treatment_protocol: Twenty-four hours prior to transfection, CGR8 and N2A cells were seeded in 96-well plates, 3000 and 5000 cells per well, respectively. Cells were transfected with the SMARTpool siRNAs at 50 nM final concentration using DharmaFECT1 reagent (Dharmacon), as recommended by the manufacturer.

tag: cell line


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mllt10 knockdown (T0303), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TACCATGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Tgs1 knockdown (T0304), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ATCGCGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pbx3 knockdown (T0301), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTGGTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Npm1 knockdown (T0302), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CAGTTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pes1 knockdown (T0299), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: ATAACCGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pafah1b1 knockdown (T0300), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TGTCCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phc1 knockdown (T0298), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCGCATAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Pbx2 knockdown (T0291), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CAGAGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Phf1 knockdown (T0296), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CTTCTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nktr knockdown (T0295), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCTTGGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mybl2 knockdown (T0292), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: TTCCTAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mbd4 knockdown (T0294), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGTTGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mki67 knockdown (T0293), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: GGTATTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0289), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CCAATACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Msh2 knockdown (T0290), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CACTCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hspa4l knockdown (T0307), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: AGGTCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nxt1 knockdown (T0297), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CGAACCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hspa8 knockdown (T0287), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TAGCGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0288), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCGTTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kin knockdown (T0286), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACTCTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmgn1 knockdown (T0285), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTCTAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Foxd1 knockdown (T0282), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CACTCTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ivns1abp knockdown (T0284), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCTGAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Foxd3 knockdown (T0283), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GAAGCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kifap3 knockdown (T0281), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTACCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kif2c knockdown (T0279), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTGGTTCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kras knockdown (T0280), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACCACTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prim2 knockdown (T0334), replicate 1

description:
Forward (i5) barcode: AAGGAGTA, reverse (i7) barcode: CGCGTAAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Id2 knockdown (T0278), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACCTGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Foxh1 knockdown (T0276), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGCGTTAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpul1 knockdown (T0277), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCCTCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Foxj2 knockdown (T0275), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGATAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kifc5b knockdown (T0273), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCTGGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, H2afx knockdown (T0274), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACGTTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ing1 knockdown (T0271), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CGAATTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ndc80 knockdown (T0266), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TACCAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kdm5a knockdown (T0270), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CCTAGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hand2 knockdown (T0268), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTGAGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mcts1 knockdown (T0340), replicate 1

description:
Forward (i5) barcode: CTAAGCCT, reverse (i7) barcode: ATCCGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kif22 knockdown (T0265), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGTTCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac7 knockdown (T0264), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TCGAGTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hnrnpk knockdown (T0263), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGCAGTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prmt2 knockdown (T0262), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGCTAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Foxm1 knockdown (T0261), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGATGGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hist1h1c knockdown (T0259), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CAACGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, G3bp1 knockdown (T0260), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTGGCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, H2afz knockdown (T0257), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTGACTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hivep2 knockdown (T0258), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CTTGACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmbs knockdown (T0255), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGGATGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmga1 knockdown (T0254), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTATGGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Khsrp knockdown (T0253), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ATCGAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac11 knockdown (T0252), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGTGAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Krr1 knockdown (T0272), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TATAGCCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0249), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTATCCGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Fxr1 knockdown (T0269), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TTCCGGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac5 knockdown (T0267), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CCATCGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmgxb4 knockdown (T0248), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGACTCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ing3 knockdown (T0246), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CGGCTATA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Jund knockdown (T0244), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ATGCAACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac6 knockdown (T0245), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GGTACGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ilf3 knockdown (T0243), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: CATCCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hat1 knockdown (T0247), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGGTGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Khdrbs1 knockdown (T0240), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GCATCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, H2afy2 knockdown (T0242), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: AGAGGACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Fus knockdown (T0238), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGTGTCTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0237), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GATGTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac1 knockdown (T0241), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: ACAGGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ing4 knockdown (T0239), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTAGACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kif23 knockdown (T0236), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTTGTGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Fxr2 knockdown (T0256), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTTCGTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Men1 knockdown (T0234), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ATCGTAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kdm5b knockdown (T0235), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTGATCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hr knockdown (T0232), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGGAAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Klf4 knockdown (T0251), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: TGACAGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Klf13 knockdown (T0229), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CCTTGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Junb knockdown (T0230), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGCTCATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmgn3 knockdown (T0233), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTCTACAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hspa2 knockdown (T0250), replicate 1

description:
Forward (i5) barcode: ACTGCATA, reverse (i7) barcode: GTTCAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Fmr1 knockdown (T0228), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCTCGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Srsf10 knockdown (T0227), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTGACACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Xrcc6 knockdown (T0224), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CATGGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ing2 knockdown (T0226), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GACAGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Jun knockdown (T0225), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGAGGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Gtf2f2 knockdown (T0222), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GAACCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ilf2 knockdown (T0221), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GACTTGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdlbp knockdown (T0218), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGTGGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0219), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTTGCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, H2afy knockdown (T0223), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CGCCTTAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmgb3 knockdown (T0214), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CATCAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Igf2bp1 knockdown (T0215), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTAGCTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prmt1 knockdown (T0216), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ATGCGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac2 knockdown (T0213), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTCAGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmgn2 knockdown (T0212), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGAGACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Fosl2 knockdown (T0211), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ATTACGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hlcs knockdown (T0217), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGTCCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac3 knockdown (T0209), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGCTGTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ik knockdown (T0210), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GGTTATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Igf2bp3 knockdown (T0205), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTAGTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hspa5 knockdown (T0204), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CGATGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kat5 knockdown (T0208), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: GTACGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hmg20a knockdown (T0206), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ACTCCTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ssh1 knockdown (T0202), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ACGTGATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Jarid2 knockdown (T0201), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TTCCTTGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0231), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CTCTCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Grsf1 knockdown (T0203), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ATGCTTCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac10 knockdown (T0200), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: CGAATTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Myod1 knockdown (T0197), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCAGACTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Foxn2 knockdown (T0199), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCAGCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Aff2 knockdown (T0198), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TGCTAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hes6 knockdown (T0195), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: AGACGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Aktip knockdown (T0194), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCCTTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kif4 knockdown (T0196), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ACCACTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0193), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: TCCAACGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0192), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GATGAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ep300 knockdown (T0190), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GACTGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cbx1 knockdown (T0191), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ACTCAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dclre1b knockdown (T0186), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ATGGCCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Chd2 knockdown (T0189), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TACGCGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Chd4 knockdown (T0183), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TTGCGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cops5 knockdown (T0188), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GCATCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdgf knockdown (T0207), replicate 1

description:
Forward (i5) barcode: GTAAGGAG, reverse (i7) barcode: ACACTCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Atf6b knockdown (T0185), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ACCTAGGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Med26 knockdown (T0181), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCACCAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Med14 knockdown (T0182), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CCATCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cirbp knockdown (T0180), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CTGAAGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dhx16 knockdown (T0179), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CTCTCAGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Elavl3 knockdown (T0178), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCGATCGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dek knockdown (T0177), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGCATCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dnmt3b knockdown (T0175), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGAGAGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ezh2 knockdown (T0176), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CATCGTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Celf2 knockdown (T0174), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CACTAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cenpe knockdown (T0173), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGTCCTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif3g knockdown (T0171), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGGAACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cdc5l knockdown (T0172), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GGATTAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ahctf1 knockdown (T0168), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCGTCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dpf2 knockdown (T0170), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGTGGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cenpc1 knockdown (T0167), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CAGAGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, E2f3 knockdown (T0169), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GTTGTCCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dbp knockdown (T0187), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GCGGATAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Clspn knockdown (T0184), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCAGGTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dctn3 knockdown (T0163), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGGACATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cenpb knockdown (T0165), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TAGGAAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Csde1 knockdown (T0164), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CCTACCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Chaf1a knockdown (T0161), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CAACAGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Elavl2 knockdown (T0157), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGCTTGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Bptf knockdown (T0158), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ATCCTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Col4a3 knockdown (T0160), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TACCGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cbx3 knockdown (T0166), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CGATGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eef1a1 knockdown (T0159), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCCAGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Crebbp knockdown (T0156), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TACCTTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Elavl4 knockdown (T0162), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGACACTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif3b knockdown (T0152), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TGACGACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ddx20 knockdown (T0151), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AGGTCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, H2afj knockdown (T0150), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AACGAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Elavl1 knockdown (T0146), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: CGGCAATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cnbp knockdown (T0148), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GGCCATAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ctnnbl1 knockdown (T0147), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TCCAACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Drap1 knockdown (T0149), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: GTGTTGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cstf3 knockdown (T0145), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: AATAGGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nuf2 knockdown (T0144), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: ATATGGCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Chd1 knockdown (T0143), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CTCAACTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Suz12 knockdown (T0142), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TAATGCCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac9 knockdown (T0139), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CTTGGTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ccnb1 knockdown (T0140), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GATGGATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0141), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CGTAGGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Fancd2 knockdown (T0137), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: AGCTTCGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbm45 knockdown (T0136), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TTCCAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Med23 knockdown (T0155), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ATGCAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0135), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CCTATTGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Larp4b knockdown (T0134), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CTACCAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ubr2 knockdown (T0138), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CTGTTGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0153), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: TTGGATCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dctn2 knockdown (T0133), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GAGATCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cbx8 knockdown (T0154), replicate 1

description:
Forward (i5) barcode: AGAGTAGA, reverse (i7) barcode: ACCTGAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ewsr1 knockdown (T0129), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CCATAACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Csda knockdown (T0130), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GACACAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Daxx knockdown (T0128), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TAGGATCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cd2bp2 knockdown (T0126), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GTGAAGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Btaf1 knockdown (T0124), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GCGGTATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, mock (T0123), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: AAGGTACG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cnot4 knockdown (T0120), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: ATTAGCGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Clasp2 knockdown (T0119), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: AGCTGAAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Trdmt1 knockdown (T0118), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TCCATGCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ercc2 knockdown (T0117), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GGTTAACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ciz1 knockdown (T0115), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TCGTCATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ccnl1 knockdown (T0114), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TCTGGTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dnmt1 knockdown (T0113), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GACTAGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Fubp1 knockdown (T0132), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CTTGTCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, E2f6 knockdown (T0111), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TCCTACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ezh1 knockdown (T0112), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: AGCAAGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dctn1 knockdown (T0108), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: AGTCAGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Chrac1 knockdown (T0105), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CGGCATTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Kdm1a knockdown (T0110), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: ATCCGCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, F630043A04Rik knockdown (T0104), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: ATCGATCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cenpa knockdown (T0107), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CACTGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cbx4 knockdown (T0131), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GCTACGAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Esrra knockdown (T0106), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: AGTCGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dbr1 knockdown (T0116), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TGCTCTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ints6 knockdown (T0127), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CCAAGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eed knockdown (T0125), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CCATGGTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dnmt3a knockdown (T0101), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: CAGAAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Eif3a knockdown (T0122), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GAGAGTCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cenph knockdown (T0100), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TCAGTCAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Celf1 knockdown (T0099), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: ATGCATGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Csad knockdown (T0121), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GATCCTAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cbx5 knockdown (T0098), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: AGAGCTCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Wbp7 knockdown (T0094), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: ACAGTGAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zmynd8 knockdown (T0095), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: ACACGTGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Brpf1 knockdown (T0093), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CCAATTGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Smarcc2 knockdown (T0092), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TGGTAGGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Luc7l3 knockdown (T0091), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TGGTCAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dr1 knockdown (T0109), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TTGCTTCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cenpn knockdown (T0088), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: AGCTACGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Htatsf1 knockdown (T0089), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GAACCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppig knockdown (T0090), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TTGCTACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Add3 knockdown (T0087), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: AGAGCAGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Parp3 knockdown (T0086), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CGTAGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Aptx knockdown (T0085), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CATGGTAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Baz1b knockdown (T0080), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: ACGTACCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Arid4b knockdown (T0078), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GCATGGTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cebpg knockdown (T0081), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TTATGCGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Mlf1ip knockdown (T0079), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GCGGAATA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ddx11 knockdown (T0084), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TGTCTCTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Atf3 knockdown (T0082), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TTGGAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Klf9 knockdown (T0083), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: ACTCACAG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Scaf11 knockdown (T0075), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GAACTCGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cd2ap knockdown (T0074), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TAGGCGAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cebpb knockdown (T0076), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CTACACCT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Polr2d knockdown (T0073), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GTGTACAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0097), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TGGAGTTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbms3 knockdown (T0070), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CGATCCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Top1mt knockdown (T0077), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TGAGTGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Parp2 knockdown (T0071), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TCTCGACT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Bcas2 knockdown (T0069), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: ACCACAAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Foxn3 knockdown (T0068), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GCAATACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Apc knockdown (T0067), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GACATGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ranbp3 knockdown (T0066), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TATAGCGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ctcf knockdown (T0103), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: GATCTGCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Cdyl knockdown (T0064), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GTGAAGTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Zfp869 knockdown (T0062), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: ATGCGCTA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Birc6 knockdown (T0065), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TCCACTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Brd7 knockdown (T0063), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GACAGACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Setd8 knockdown (T0060), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CATCCATC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Parp1 knockdown (T0054), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: ATAAGGCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nfrkb knockdown (T0058), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CGTATAGC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Snrnp200 knockdown (T0053), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GGTTCCTT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ube2t knockdown (T0072), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CAGTAGTC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ube2o knockdown (T0061), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GACTCTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Aggf1 knockdown (T0055), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CTTGCTTG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Chd9 knockdown (T0052), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TGTGCACA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Hdac4 knockdown (T0049), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GCATATCG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Brd8 knockdown (T0050), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: CTGACTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siMbnl (T0057), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: AGCTCATG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Nup98 knockdown (T0059), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: TAATGGCC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ppp2r1b knockdown (T0056), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: GGCCAATT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Ube2q1 knockdown (T0046), replicate 1

description:
Forward (i5) barcode: TAGATCGC, reverse (i7) barcode: TACGGCAT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Elmod3 knockdown (T0047), replicate 1

description:
Forward (i5) barcode: TAGATCGC, reverse (i7) barcode: CTCATCAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Dmtf1 knockdown (T0102), replicate 1

description:
Forward (i5) barcode: TATCCTCT, reverse (i7) barcode: TGACGAGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Bclaf1 knockdown (T0051), replicate 1

description:
Forward (i5) barcode: CTCTCTAT, reverse (i7) barcode: AGTCTGAC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Atrx knockdown (T0048), replicate 1

description:
Forward (i5) barcode: TAGATCGC, reverse (i7) barcode: GCATAAGG
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Klf8 knockdown (T0044), replicate 1

description:
Forward (i5) barcode: TAGATCGC, reverse (i7) barcode: GACAGTGA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, siNT (T0045), replicate 1

description:
Forward (i5) barcode: TAGATCGC, reverse (i7) barcode: GACTCAGT
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Prpf18 knockdown (T0042), replicate 1

description:
Forward (i5) barcode: TAGATCGC, reverse (i7) barcode: CCTATACC
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Rbbp6 knockdown (T0041), replicate 1

description:
Forward (i5) barcode: TAGATCGC, reverse (i7) barcode: ACGATCCA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab


title: SPAR-Seq of multi-exon regions of 50 genes in CGR8, Brca1 knockdown (T0040), replicate 1

description:
Forward (i5) barcode: TAGATCGC, reverse (i7) barcode: ATCCGCAA
KnockdownAnnotation.tab
ScreenJuncUp.20-77.fa
ScreenJuncDn.20-77.fa
ScreenEvents_junctions.tab
PSI.SSMD.CGR8.tab
Reads_perEvent_CGR8.tab
Expression.CGR8.treatments.tab