title: ChIP-seq from K562 (ENCLB443RVW)

description:
https://www.encodeproject.org/experiments/ENCSR889QUI/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on human eGFP-CEBPB tagged K562 cell line.
experiment encode accession: ENCSR889QUI
assay title: ChIP-seq
encode release date: 2015-12-10
lab: Michael Snyder, Stanford
library encode accession: ENCLB443RVW
size range: 450-650

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-CEBPB fusion protein

value: Control

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to CEBPB

value: Kevin White, UChicago

value: ENCBS818FPM at ENCODE; https://www.encodeproject.org/ENCBS818FPM/

value: ENCODE dbxrefs Cellosaurus CVCL_AW15; http://web.expasy.org/cellosaurus/CVCL_AW15


title: eCLIP from K562 (ENCLB959MMV)

status: Public on Jan 04 2017

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR893RAV/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on K562 against U2AF2
experiment encode accession: ENCSR893RAV
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR871RTL
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB959MMV
size range: 175-300

library_source: transcriptomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: total RNA

organism: Homo sapiens

source_name: Homo sapiens K562 immortalized cell line

extract_protocol:
pipeline protocol: https://www.encodeproject.org/documents/dde0b669-0909-4f8b-946d-3cb9f35a6c52/@@download/attachment/eCLIP_analysisSOP_v1.P.pdf
extraction method: see document
general protocol: https://www.encodeproject.org/documents/fa2a3246-6039-46ba-b960-17fe06e7876a/@@download/attachment/CLIP_SOP_v1.0.pdf

tag: antibody

tag: line

value: immortalized cell line

tag: biosample encode accession

tag: dev stage

value: adult

tag: age

value: 53 year

tag: Sex

value: female

tag: passage number

tag: lab

value: Gene Yeo, UCSD

tag: health state

value: chronic myelogenous leukemia (CML)

tag: link

value: ENCBS666SJB at ENCODE; https://www.encodeproject.org/ENCBS666SJB/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-243.aspx


title: ChIP-seq from MCF-7 (ENCLB006BON)

description:
https://www.encodeproject.org/experiments/ENCSR912NMR/
***************
biological replicate number: 1
technical replicate number: 1
description: NONO ChIP-seq on human MCF-7
experiment encode accession: ENCSR912NMR
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR594UCI, ENCSR217LRF
encode release date: 2016-06-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB006BON
size range: 450-650

library_source: genomic

molecule: genomic DNA

source_name: Homo sapiens MCF-7 immortalized cell line

value: NONO

value: 69 year

value: Michael Snyder, Stanford

value: breast cancer (adenocarcinoma)

value: ENCBS547AXB at ENCODE; https://www.encodeproject.org/ENCBS547AXB/

value: Derived from ENCODE donor ENCDO000AAE; https://www.encodeproject.org/ENCDO000AAE/

value: ENCODE dbxrefs Cellosaurus CVCL_0031; http://web.expasy.org/cellosaurus/CVCL_0031


title: ChIP-seq from K562 (ENCLB283URL)

description:
https://www.encodeproject.org/experiments/ENCSR895HSJ/
***************
biological replicate number: 1
technical replicate number: 1
description: SMARCA5 ChIP-seq on human K562
experiment encode accession: ENCSR895HSJ
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI
encode release date: 2016-09-27
lab: Michael Snyder, Stanford
library encode accession: ENCLB283URL
size range: 450-650

value: immortalized cell line

tag: description

value: Leukemia, the continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

value: ENCBS994WPS at ENCODE; https://www.encodeproject.org/ENCBS994WPS/


title: ChIP-seq from K562 (ENCLB054IOO)

description:
https://www.encodeproject.org/experiments/ENCSR894CGX/
***************
biological replicate number: 1
technical replicate number: 1
description: SUPT5H ChIP-seq on human K562
experiment encode accession: ENCSR894CGX
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI
encode release date: 2016-10-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB054IOO
size range: 450-650

value: adult

value: 53 year

value: female

value: ENCBS465MWC at ENCODE; https://www.encodeproject.org/ENCBS465MWC/


title: ChIP-seq from K562 (ENCLB477XAS)

description:
https://www.encodeproject.org/experiments/ENCSR894CGX/
***************
biological replicate number: 2
technical replicate number: 1
description: SUPT5H ChIP-seq on human K562
experiment encode accession: ENCSR894CGX
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI
encode release date: 2016-10-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB477XAS
size range: 450-650

value: chronic myelogenous leukemia (CML)

value: ENCBS783WYV at ENCODE; https://www.encodeproject.org/ENCBS783WYV/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ChIP-seq from HEK293 (ENCLB243OPL)

description:
https://www.encodeproject.org/experiments/ENCSR909TSW/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZNF547 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR909TSW
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB243OPL
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZNF547 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZNF547 under the control of a CMV promoter.

value: embryonic

value: unknown

value: ENCBS073WLU at ENCODE; https://www.encodeproject.org/ENCBS073WLU/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: eCLIP from HepG2 (ENCLB659MHW)

description:
https://www.encodeproject.org/experiments/ENCSR886YYD/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on HepG2 against SF3B4
experiment encode accession: ENCSR886YYD
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB659MHW
size range: 175-300

source_name: Homo sapiens HepG2 immortalized cell line

extract_protocol:
pipeline protocol: https://www.encodeproject.org/documents/dde0b669-0909-4f8b-946d-3cb9f35a6c52/@@download/attachment/eCLIP_analysisSOP_v1.P.pdf
general protocol: https://www.encodeproject.org/documents/842f7424-5396-424a-a1a3-3f18707c3222/@@download/attachment/eCLIP_SOP_v1.P_110915.pdf
extraction method: see document

value: Control

value: child

value: 15 year

value: male

value: Gene Yeo, UCSD

value: hepatocellular carcinoma

value: ENCBS861HMN at ENCODE; https://www.encodeproject.org/ENCBS861HMN/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: eCLIP from K562 (ENCLB060SHS)

description:
https://www.encodeproject.org/experiments/ENCSR893RAV/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on K562 against U2AF2
experiment encode accession: ENCSR893RAV
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR871RTL
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB060SHS
size range: 175-300

value: immortalized cell line

value: adult

value: 53 year

value: female

value: chronic myelogenous leukemia (CML)

value: ENCBS865VEQ at ENCODE; https://www.encodeproject.org/ENCBS865VEQ/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-243.aspx


title: ChIP-seq from HEK293 (ENCLB184HSW)

description:
https://www.encodeproject.org/experiments/ENCSR924GRG/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZBTB49 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR924GRG
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB184HSW
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZBTB49 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZBTB49 under the control of a CMV promoter.

value: embryonic

value: unknown

value: Michael Snyder, Stanford

value: ENCBS876NMZ at ENCODE; https://www.encodeproject.org/ENCBS876NMZ/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293T (ENCLB408LRK)

description:
https://www.encodeproject.org/experiments/ENCSR882ICT/
***************
biological replicate number: 2
technical replicate number: 1
description: ZNF384 ChIP-seq on human HEK293T
experiment encode accession: ENCSR882ICT
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR386FAB
encode release date: 2016-11-17
lab: Michael Snyder, Stanford
library encode accession: ENCLB408LRK
size range: 450-650

source_name: Homo sapiens HEK293T immortalized cell line

value: ENCBS276VDW at ENCODE; https://www.encodeproject.org/ENCBS276VDW/


title: ChIP-seq from HEK293T (ENCLB055YTL)

description:
https://www.encodeproject.org/experiments/ENCSR882ICT/
***************
biological replicate number: 1
technical replicate number: 1
description: ZNF384 ChIP-seq on human HEK293T
experiment encode accession: ENCSR882ICT
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR386FAB
encode release date: 2016-11-17
lab: Michael Snyder, Stanford
library encode accession: ENCLB055YTL
size range: 450-650

value: ENCBS582KZL at ENCODE; https://www.encodeproject.org/ENCBS582KZL/


title: ChIP-seq from HEK293 (ENCLB390DUN)

description:
https://www.encodeproject.org/experiments/ENCSR882ZTS/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZBTB11 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR882ZTS
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB390DUN
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZBTB11 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZBTB11 under the control of a CMV promoter.

value: ENCBS097DHX at ENCODE; https://www.encodeproject.org/ENCBS097DHX/


title: ChIP-seq from HEK293 (ENCLB592DTG)

description:
https://www.encodeproject.org/experiments/ENCSR882ZTS/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZBTB11 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR882ZTS
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB592DTG
size range: 450-650

value: immortalized cell line

value: ENCBS310DWJ at ENCODE; https://www.encodeproject.org/ENCBS310DWJ/


title: ChIP-seq from HEK293 (ENCLB504PSD)

description:
https://www.encodeproject.org/experiments/ENCSR873PPH/
***************
biological replicate number: 1
technical replicate number: 1
description: Input ChIP-seq on eGFP-ZFP64 tagged human HEK293 cells.
experiment encode accession: ENCSR873PPH
assay title: ChIP-seq
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB504PSD
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZFP64 fusion protein

value: Control

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZFP64 under the control of a CMV promoter.

value: female

value: ENCBS502HSC at ENCODE; https://www.encodeproject.org/ENCBS502HSC/


title: ChIP-seq from K562 (ENCLB699RIE)

description:
https://www.encodeproject.org/experiments/ENCSR876GXA/
***************
biological replicate number: 4
technical replicate number: 1
description: ZBTB33 ChIP-seq on human K562
experiment encode accession: ENCSR876GXA
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI, ENCSR554FDZ
encode release date: 2016-06-23
lab: Michael Snyder, Stanford
library encode accession: ENCLB699RIE
size range: 450-650

value: adult

value: 53 year

value: chronic myelogenous leukemia (CML)

value: ENCBS344LIE at ENCODE; https://www.encodeproject.org/ENCBS344LIE/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004


title: ChIP-seq from A549 (ENCLB640VOY)

description:
https://www.encodeproject.org/experiments/ENCSR871XML/
***************
biological replicate number: 3
technical replicate number: 1
description: rabbit-IgG-control ChIP-seq on human A549
experiment encode accession: ENCSR871XML
assay title: ChIP-seq
encode release date: 2014-07-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB640VOY
size range: 450-650

source_name: Homo sapiens A549 immortalized cell line

value: epithelial cell line derived from a 58 year old caucasian male lung carcinoma.

value: 58 year

value: male

value: Michael Snyder, Stanford

value: ENCBS848SUF at ENCODE; https://www.encodeproject.org/ENCBS848SUF/

value: Derived from ENCODE donor ENCDO000AAZ; https://www.encodeproject.org/ENCDO000AAZ/

value: ENCODE dbxrefs Cellosaurus CVCL_0023; http://web.expasy.org/cellosaurus/CVCL_0023

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-185.aspx


title: ChIP-seq from K562 (ENCLB005VWE)

description:
https://www.encodeproject.org/experiments/ENCSR876GXA/
***************
biological replicate number: 3
technical replicate number: 1
description: ZBTB33 ChIP-seq on human K562
experiment encode accession: ENCSR876GXA
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI, ENCSR554FDZ
encode release date: 2016-06-23
lab: Michael Snyder, Stanford
library encode accession: ENCLB005VWE
size range: 450-650

value: immortalized cell line

value: Leukemia, the continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

value: ENCBS603CUX at ENCODE; https://www.encodeproject.org/ENCBS603CUX/

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-243.aspx


title: ChIP-seq from A549 (ENCLB355WWU)

description:
https://www.encodeproject.org/experiments/ENCSR871XML/
***************
biological replicate number: 2
technical replicate number: 1
description: rabbit-IgG-control ChIP-seq on human A549
experiment encode accession: ENCSR871XML
assay title: ChIP-seq
encode release date: 2014-07-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB355WWU
size range: 450-650

value: Control

value: adult

value: ENCBS611JSC at ENCODE; https://www.encodeproject.org/ENCBS611JSC/


title: eCLIP from K562 (ENCLB446YAI)

description:
https://www.encodeproject.org/experiments/ENCSR871RTL/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on K562 against U2AF2
experiment encode accession: ENCSR871RTL
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB446YAI
size range: 175-300

value: 53 year

value: female

value: Gene Yeo, UCSD

value: chronic myelogenous leukemia (CML)

value: ENCBS865VEQ at ENCODE; https://www.encodeproject.org/ENCBS865VEQ/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: eCLIP from K562 (ENCLB627IFQ)

description:
https://www.encodeproject.org/experiments/ENCSR867DSZ/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on K562 against NPM1
experiment encode accession: ENCSR867DSZ
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR468ZQA
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB627IFQ
size range: 175-300

value: ENCBS931MQO at ENCODE; https://www.encodeproject.org/ENCBS931MQO/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: eCLIP from K562 (ENCLB112IFH)

description:
https://www.encodeproject.org/experiments/ENCSR867ZVK/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on K562 against YWHAG
experiment encode accession: ENCSR867ZVK
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR812PBU
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB112IFH
size range: 175-300

value: YWHAG

value: ENCBS489LOC at ENCODE; https://www.encodeproject.org/ENCBS489LOC/


title: ChIP-seq from HEK293 (ENCLB815CHT)

description:
https://www.encodeproject.org/experiments/ENCSR866WLH/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZNF800 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR866WLH
assay title: ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-31
lab: Michael Snyder, Stanford
library encode accession: ENCLB815CHT
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZNF800 fusion protein

value: immortalized cell line

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZNF800 under the control of a CMV promoter.

value: embryonic

value: unknown

value: Michael Snyder, Stanford

value: ENCBS512GBG at ENCODE; https://www.encodeproject.org/ENCBS512GBG/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB994YCZ)

description:
https://www.encodeproject.org/experiments/ENCSR864VJE/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZSCAN16 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR864VJE
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB994YCZ
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZSCAN16 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZSCAN16 under the control of a CMV promoter.

value: female

value: ENCBS844SVG at ENCODE; https://www.encodeproject.org/ENCBS844SVG/


title: eCLIP from K562 (ENCLB116EMB)

description:
https://www.encodeproject.org/experiments/ENCSR867DSZ/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on K562 against NPM1
experiment encode accession: ENCSR867DSZ
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR468ZQA
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB116EMB
size range: 175-300

value: adult

value: 53 year

value: Gene Yeo, UCSD

value: chronic myelogenous leukemia (CML)

value: ENCBS831COV at ENCODE; https://www.encodeproject.org/ENCBS831COV/


title: ChIP-seq from HEK293 (ENCLB599HDQ)

description:
https://www.encodeproject.org/experiments/ENCSR860UAT/
***************
biological replicate number: 1
technical replicate number: 1
description: Input ChIP-seq on eGFP-PRDM12 tagged human HEK293 cells.
experiment encode accession: ENCSR860UAT
assay title: ChIP-seq
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB599HDQ
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-PRDM12 fusion protein

value: Control

value: HEK293 cell line stably expressing N-terminal tagged eGFP-PRDM12 under the control of a CMV promoter.

value: ENCBS568ALT at ENCODE; https://www.encodeproject.org/ENCBS568ALT/


title: eCLIP from K562 (ENCLB418DVH)

description:
https://www.encodeproject.org/experiments/ENCSR863ZGZ/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on K562 against LARP7
experiment encode accession: ENCSR863ZGZ
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB418DVH
size range: 175-300

value: immortalized cell line

value: ENCBS079MXX at ENCODE; https://www.encodeproject.org/ENCBS079MXX/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-243.aspx


title: eCLIP from K562 (ENCLB674FXL)

description:
https://www.encodeproject.org/experiments/ENCSR861PAR/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on K562 against NONO
experiment encode accession: ENCSR861PAR
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR487EUV
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB674FXL
size range: 175-300

value: NONO

value: ENCBS489LOC at ENCODE; https://www.encodeproject.org/ENCBS489LOC/

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: eCLIP from K562 (ENCLB152DBJ)

description:
https://www.encodeproject.org/experiments/ENCSR862QCH/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on K562 against U2AF1
experiment encode accession: ENCSR862QCH
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR482ZSE
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB152DBJ
size range: 175-300

value: female

value: ENCBS652YOG at ENCODE; https://www.encodeproject.org/ENCBS652YOG/


title: eCLIP from HepG2 (ENCLB173YRG)

description:
https://www.encodeproject.org/experiments/ENCSR861GYE/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on HepG2 against Lin28B
experiment encode accession: ENCSR861GYE
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR746ZSV
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB173YRG
size range: 175-300

value: child

value: 15 year

value: male

value: hepatocellular carcinoma

value: ENCBS362ASG at ENCODE; https://www.encodeproject.org/ENCBS362ASG/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027


title: eCLIP from HepG2 (ENCLB200JXS)

description:
https://www.encodeproject.org/experiments/ENCSR861GYE/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on HepG2 against Lin28B
experiment encode accession: ENCSR861GYE
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR746ZSV
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB200JXS
size range: 175-300

value: immortalized cell line

value: Gene Yeo, UCSD

value: ENCBS308ZPA at ENCODE; https://www.encodeproject.org/ENCBS308ZPA/


title: eCLIP from K562 (ENCLB160FVX)

description:
https://www.encodeproject.org/experiments/ENCSR862QCH/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on K562 against U2AF1
experiment encode accession: ENCSR862QCH
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR482ZSE
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB160FVX
size range: 175-300

value: adult

value: 53 year

value: chronic myelogenous leukemia (CML)

value: ENCBS152EMG at ENCODE; https://www.encodeproject.org/ENCBS152EMG/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004


title: eCLIP from K562 (ENCLB808UXJ)

description:
https://www.encodeproject.org/experiments/ENCSR867ZVK/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on K562 against YWHAG
experiment encode accession: ENCSR867ZVK
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR812PBU
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB808UXJ
size range: 175-300

value: YWHAG

value: female

value: ENCBS931MQO at ENCODE; https://www.encodeproject.org/ENCBS931MQO/

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: ChIP-seq from HEK293 (ENCLB212WDT)

description:
https://www.encodeproject.org/experiments/ENCSR859BMR/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-KLF1 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR859BMR
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB212WDT
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-KLF1 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-KLF1 under the control of a CMV promoter.

value: embryonic

value: unknown

value: Michael Snyder, Stanford

value: ENCBS211CSP at ENCODE; https://www.encodeproject.org/ENCBS211CSP/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB326VNQ)

description:
https://www.encodeproject.org/experiments/ENCSR859BMR/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-KLF1 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR859BMR
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB326VNQ
size range: 450-650

value: immortalized cell line

value: ENCBS870ICB at ENCODE; https://www.encodeproject.org/ENCBS870ICB/


title: ChIP-seq from HEK293 (ENCLB171RVR)

description:
https://www.encodeproject.org/experiments/ENCSR866WLH/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZNF800 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR866WLH
assay title: ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-31
lab: Michael Snyder, Stanford
library encode accession: ENCLB171RVR
size range: 450-650

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZNF800 under the control of a CMV promoter.

value: ENCBS105LAW at ENCODE; https://www.encodeproject.org/ENCBS105LAW/


title: ChIP-seq from HEK293 (ENCLB794OJY)

description:
https://www.encodeproject.org/experiments/ENCSR851FFP/
***************
biological replicate number: 1
technical replicate number: 1
description: Input ChIP-seq on eGFP-AEBP2 tagged human HEK293 cells.
experiment encode accession: ENCSR851FFP
assay title: ChIP-seq
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB794OJY
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-AEBP2 fusion protein

value: Control

value: HEK293 cell line stably expressing N-terminal tagged eGFP-AEBP2 under the control of a CMV promoter.

value: ENCBS715MMR at ENCODE; https://www.encodeproject.org/ENCBS715MMR/


title: ChIP-seq from HEK293 (ENCLB013WRU)

description:
https://www.encodeproject.org/experiments/ENCSR864VJE/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZSCAN16 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR864VJE
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB013WRU
size range: 450-650

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZSCAN16 under the control of a CMV promoter.

value: ENCBS045SQX at ENCODE; https://www.encodeproject.org/ENCBS045SQX/


title: ChIP-seq from K562 (ENCLB442GMR)

description:
https://www.encodeproject.org/experiments/ENCSR854MCV/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-IRF1 ChIP-seq on human K562
experiment encode accession: ENCSR854MCV
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR387MCX
encode release date: 2016-03-02
lab: Michael Snyder, Stanford
library encode accession: ENCLB442GMR
size range: 450-650

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-IRF1 fusion protein

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to IRF1

value: adult

value: 53 year

value: female

value: Kevin White, UChicago

value: chronic myelogenous leukemia (CML)

value: ENCBS429AAA at ENCODE; https://www.encodeproject.org/ENCBS429AAA/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_AW28; http://web.expasy.org/cellosaurus/CVCL_AW28


title: ChIP-seq from HEK293 (ENCLB281MYK)

description:
https://www.encodeproject.org/experiments/ENCSR854IPI/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZNF707 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR854IPI
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB281MYK
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZNF707 fusion protein

value: immortalized cell line

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZNF707 under the control of a CMV promoter.

value: embryonic

value: unknown

value: Michael Snyder, Stanford

value: ENCBS402FLP at ENCODE; https://www.encodeproject.org/ENCBS402FLP/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from K562 (ENCLB534ROR)

description:
https://www.encodeproject.org/experiments/ENCSR854MCV/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-IRF1 ChIP-seq on human K562
experiment encode accession: ENCSR854MCV
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR387MCX
encode release date: 2016-03-02
lab: Michael Snyder, Stanford
library encode accession: ENCLB534ROR
size range: 450-650

value: ENCBS385AAA at ENCODE; https://www.encodeproject.org/ENCBS385AAA/

value: ENCODE dbxrefs K562; http://genome.cse.ucsc.edu/cgi-bin/hgEncodeVocab?ra=encode/cv.ra&term=K562


title: eCLIP from K562 (ENCLB635FWC)

description:
https://www.encodeproject.org/experiments/ENCSR861PAR/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on K562 against NONO
experiment encode accession: ENCSR861PAR
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR487EUV
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB635FWC
size range: 175-300

value: NONO

value: adult

value: Gene Yeo, UCSD

value: ENCBS931MQO at ENCODE; https://www.encodeproject.org/ENCBS931MQO/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: eCLIP from HepG2 (ENCLB390TXJ)

description:
https://www.encodeproject.org/experiments/ENCSR859PUB/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on HepG2 against SF3A3
experiment encode accession: ENCSR859PUB
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB390TXJ
size range: 175-300

value: Control

value: child

value: 15 year

value: male

value: hepatocellular carcinoma

value: ENCBS362ASG at ENCODE; https://www.encodeproject.org/ENCBS362ASG/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027


title: eCLIP from HepG2 (ENCLB342QIE)

description:
https://www.encodeproject.org/experiments/ENCSR841EQA/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on HepG2 against TAF15
experiment encode accession: ENCSR841EQA
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR708TCY
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB342QIE
size range: 175-300

value: immortalized cell line

value: ENCBS308ZPA at ENCODE; https://www.encodeproject.org/ENCBS308ZPA/


title: ChIP-seq from HEK293 (ENCLB934VHO)

description:
https://www.encodeproject.org/experiments/ENCSR854IPI/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZNF707 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR854IPI
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB934VHO
size range: 450-650

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZNF707 under the control of a CMV promoter.

value: embryonic

value: female

value: unknown

value: Michael Snyder, Stanford

value: ENCBS249ESB at ENCODE; https://www.encodeproject.org/ENCBS249ESB/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB543WFM)

description:
https://www.encodeproject.org/experiments/ENCSR840JVQ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input ChIP-seq on eGFP-ZFP41 tagged human HEK293 cells.
experiment encode accession: ENCSR840JVQ
assay title: ChIP-seq
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB543WFM
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZFP41 fusion protein

value: Control

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZFP41 under the control of a CMV promoter.

value: ENCBS503YOP at ENCODE; https://www.encodeproject.org/ENCBS503YOP/


title: eCLIP from HepG2 (ENCLB759WIV)

description:
https://www.encodeproject.org/experiments/ENCSR839KAX/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on HepG2 against FAM120A
experiment encode accession: ENCSR839KAX
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB759WIV
size range: 175-300

value: child

value: 15 year

value: male

value: Gene Yeo, UCSD

value: ENCBS548DJV at ENCODE; https://www.encodeproject.org/ENCBS548DJV/

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: ChIP-seq from K562 (ENCLB240SJJ)

description:
https://www.encodeproject.org/experiments/ENCSR835TCD/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-HDAC8 ChIP-seq on human K562
experiment encode accession: ENCSR835TCD
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR578DNH
encode release date: 2016-02-16
lab: Michael Snyder, Stanford
library encode accession: ENCLB240SJJ
size range: 450-650

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-HDAC8 fusion protein

value: immortalized cell line

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to HDAC8

value: adult

value: 53 year

value: Kevin White, UChicago

value: chronic myelogenous leukemia (CML)

value: ENCBS383AAA at ENCODE; https://www.encodeproject.org/ENCBS383AAA/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_AW23; http://web.expasy.org/cellosaurus/CVCL_AW23


title: eCLIP from K562 (ENCLB913WLN)

description:
https://www.encodeproject.org/experiments/ENCSR829SLO/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on K562 against HNRNPU
experiment encode accession: ENCSR829SLO
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB913WLN
size range: 175-300

source_name: Homo sapiens K562 immortalized cell line

value: Control

value: female

value: ENCBS218QRN at ENCODE; https://www.encodeproject.org/ENCBS218QRN/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-243.aspx


title: eCLIP from HepG2 (ENCLB335FPG)

description:
https://www.encodeproject.org/experiments/ENCSR828ZID/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on HepG2 against HNRNPK
experiment encode accession: ENCSR828ZID
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR354KAS
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB335FPG
size range: 175-300

value: HNRNPK

value: child

value: 15 year

value: male

value: Gene Yeo, UCSD

value: hepatocellular carcinoma

value: ENCBS864WAF at ENCODE; https://www.encodeproject.org/ENCBS864WAF/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027


title: ChIP-seq from GM12878 (ENCLB375YYG)

description:
https://www.encodeproject.org/experiments/ENCSR835XKS/
***************
biological replicate number: 2
technical replicate number: 1
description: TRIM22 ChIP-seq on human GM12878
experiment encode accession: ENCSR835XKS
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR398JTO
encode release date: 2016-07-28
lab: Michael Snyder, Stanford
library encode accession: ENCLB375YYG
size range: 450-650

source_name: Homo sapiens GM12878 immortalized cell line

value: immortalized cell line

value: adult

value: unknown

value: Michael Snyder, Stanford

value: ENCBS339VHO at ENCODE; https://www.encodeproject.org/ENCBS339VHO/

value: Derived from ENCODE donor ENCDO000AAK; https://www.encodeproject.org/ENCDO000AAK/

value: ENCODE dbxrefs Cellosaurus CVCL_7526; http://web.expasy.org/cellosaurus/CVCL_7526


title: ChIP-seq from K562 (ENCLB824ZRT)

description:
https://www.encodeproject.org/experiments/ENCSR835TCD/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-HDAC8 ChIP-seq on human K562
experiment encode accession: ENCSR835TCD
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR578DNH
encode release date: 2016-02-16
lab: Michael Snyder, Stanford
library encode accession: ENCLB824ZRT
size range: 450-650

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to HDAC8

value: 53 year

value: female

value: Kevin White, UChicago

value: chronic myelogenous leukemia (CML)

value: ENCBS422AAA at ENCODE; https://www.encodeproject.org/ENCBS422AAA/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_AW23; http://web.expasy.org/cellosaurus/CVCL_AW23


title: ChIP-seq from GM12878 (ENCLB589XPX)

description:
https://www.encodeproject.org/experiments/ENCSR835XKS/
***************
biological replicate number: 1
technical replicate number: 1
description: TRIM22 ChIP-seq on human GM12878
experiment encode accession: ENCSR835XKS
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR398JTO
encode release date: 2016-07-28
lab: Michael Snyder, Stanford
library encode accession: ENCLB589XPX
size range: 450-650

value: ENCBS421UOG at ENCODE; https://www.encodeproject.org/ENCBS421UOG/


title: eCLIP from K562 (ENCLB675HEB)

description:
https://www.encodeproject.org/experiments/ENCSR840DRD/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on K562 against CSTF2T
experiment encode accession: ENCSR840DRD
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR722LZB
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB675HEB
size range: 175-300

value: Gene Yeo, UCSD

value: ENCBS126AJR at ENCODE; https://www.encodeproject.org/ENCBS126AJR/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: eCLIP from HepG2 (ENCLB276ADD)

description:
https://www.encodeproject.org/experiments/ENCSR828ZID/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on HepG2 against HNRNPK
experiment encode accession: ENCSR828ZID
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR354KAS
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB276ADD
size range: 175-300

source_name: Homo sapiens HepG2 immortalized cell line

value: HNRNPK

value: immortalized cell line

value: child

value: 15 year

value: male

value: hepatocellular carcinoma

value: ENCBS814VTY at ENCODE; https://www.encodeproject.org/ENCBS814VTY/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027


title: ChIP-seq from HEK293 (ENCLB732RHF)

description:
https://www.encodeproject.org/experiments/ENCSR827NWO/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-FEZF1 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR827NWO
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB732RHF
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-FEZF1 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-FEZF1 under the control of a CMV promoter.

value: embryonic

value: unknown

value: female

value: Michael Snyder, Stanford

value: ENCBS945GDK at ENCODE; https://www.encodeproject.org/ENCBS945GDK/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB400STV)

description:
https://www.encodeproject.org/experiments/ENCSR827NWO/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-FEZF1 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR827NWO
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB400STV
size range: 450-650

value: ENCBS416NEJ at ENCODE; https://www.encodeproject.org/ENCBS416NEJ/


title: ChIP-seq from K562 (ENCLB089LJO)

description:
https://www.encodeproject.org/experiments/ENCSR819LHG/
***************
biological replicate number: 1
technical replicate number: 1
description: FOXA1 ChIP-seq on human K562
experiment encode accession: ENCSR819LHG
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR658AGP
encode release date: 2016-11-17
lab: Michael Snyder, Stanford
library encode accession: ENCLB089LJO
size range: 450-650

value: adult

value: 53 year

value: chronic myelogenous leukemia (CML)

value: ENCBS727RLP at ENCODE; https://www.encodeproject.org/ENCBS727RLP/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/


title: ChIP-seq from K562 (ENCLB562CFQ)

description:
https://www.encodeproject.org/experiments/ENCSR819LHG/
***************
biological replicate number: 2
technical replicate number: 1
description: FOXA1 ChIP-seq on human K562
experiment encode accession: ENCSR819LHG
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR658AGP
encode release date: 2016-11-17
lab: Michael Snyder, Stanford
library encode accession: ENCLB562CFQ
size range: 450-650

value: immortalized cell line

value: ENCBS187ZIN at ENCODE; https://www.encodeproject.org/ENCBS187ZIN/


title: ChIP-seq from K562 (ENCLB279KNJ)

description:
https://www.encodeproject.org/experiments/ENCSR820GND/
***************
biological replicate number: 2
technical replicate number: 1
description: RNF2 ChIP-seq on human K562
experiment encode accession: ENCSR820GND
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI, ENCSR554FDZ
encode release date: 2016-07-28
lab: Michael Snyder, Stanford
library encode accession: ENCLB279KNJ
size range: 450-650

value: ENCBS719UQU at ENCODE; https://www.encodeproject.org/ENCBS719UQU/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004


title: eCLIP from K562 (ENCLB570DQA)

description:
https://www.encodeproject.org/experiments/ENCSR840DRD/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on K562 against CSTF2T
experiment encode accession: ENCSR840DRD
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR722LZB
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB570DQA
size range: 175-300

value: Gene Yeo, UCSD

value: ENCBS549CIX at ENCODE; https://www.encodeproject.org/ENCBS549CIX/

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: eCLIP from K562 (ENCLB333QAN)

description:
https://www.encodeproject.org/experiments/ENCSR820GBM/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on K562 against SLTM
experiment encode accession: ENCSR820GBM
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB333QAN
size range: 175-300

value: Control

value: female

value: ENCBS253VOZ at ENCODE; https://www.encodeproject.org/ENCBS253VOZ/


title: ChIP-seq from K562 (ENCLB065PPI)

description:
https://www.encodeproject.org/experiments/ENCSR820GND/
***************
biological replicate number: 1
technical replicate number: 1
description: RNF2 ChIP-seq on human K562
experiment encode accession: ENCSR820GND
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI, ENCSR554FDZ
encode release date: 2016-07-28
lab: Michael Snyder, Stanford
library encode accession: ENCLB065PPI
size range: 450-650

value: Michael Snyder, Stanford

value: ENCBS344LIE at ENCODE; https://www.encodeproject.org/ENCBS344LIE/


title: eCLIP from K562 (ENCLB633JIH)

description:
https://www.encodeproject.org/experiments/ENCSR812PBU/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on K562 against YWHAG
experiment encode accession: ENCSR812PBU
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB633JIH
size range: 175-300

value: adult

value: ENCBS489LOC at ENCODE; https://www.encodeproject.org/ENCBS489LOC/


title: ChIP-seq from K562 (ENCLB266GKU)

description:
https://www.encodeproject.org/experiments/ENCSR808AKZ/
***************
biological replicate number: 2
technical replicate number: 1
description: BCOR ChIP-seq on human K562
experiment encode accession: ENCSR808AKZ
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI
encode release date: 2016-09-01
lab: Michael Snyder, Stanford
library encode accession: ENCLB266GKU
size range: 450-650

value: BCOR

value: 53 year

value: chronic myelogenous leukemia (CML)

value: ENCBS406RFF at ENCODE; https://www.encodeproject.org/ENCBS406RFF/


title: eCLIP from K562 (ENCLB632AGH)

description:
https://www.encodeproject.org/experiments/ENCSR811FFO/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on K562 against FAM120A
experiment encode accession: ENCSR811FFO
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB632AGH
size range: 175-300

value: immortalized cell line

value: ENCBS736PRC at ENCODE; https://www.encodeproject.org/ENCBS736PRC/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-243.aspx


title: ChIP-seq from K562 (ENCLB918FBQ)

description:
https://www.encodeproject.org/experiments/ENCSR818DQV/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-MAFG ChIP-seq on human K562
experiment encode accession: ENCSR818DQV
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR727UQK
encode release date: 2016-01-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB918FBQ
size range: 450-650

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-MAFG fusion protein

value: eGFP-MAFG

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to MAFG

value: Kevin White, UChicago

value: ENCBS062KUE at ENCODE; https://www.encodeproject.org/ENCBS062KUE/

value: ENCODE dbxrefs Cellosaurus CVCL_AW34; http://web.expasy.org/cellosaurus/CVCL_AW34


title: ChIP-seq from K562 (ENCLB786XSD)

description:
https://www.encodeproject.org/experiments/ENCSR808AKZ/
***************
biological replicate number: 1
technical replicate number: 1
description: BCOR ChIP-seq on human K562
experiment encode accession: ENCSR808AKZ
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI
encode release date: 2016-09-01
lab: Michael Snyder, Stanford
library encode accession: ENCLB786XSD
size range: 450-650

value: female

value: Michael Snyder, Stanford

value: ENCBS465MWC at ENCODE; https://www.encodeproject.org/ENCBS465MWC/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004


title: ChIP-seq from HEK293 (ENCLB140NEY)

description:
https://www.encodeproject.org/experiments/ENCSR807LQP/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-SP2 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR807LQP
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB140NEY
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-SP2 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-SP2 under the control of a CMV promoter.

value: embryonic

value: unknown

value: ENCBS974ABS at ENCODE; https://www.encodeproject.org/ENCBS974ABS/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB820SRC)

description:
https://www.encodeproject.org/experiments/ENCSR807LQP/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-SP2 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR807LQP
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB820SRC
size range: 450-650

value: immortalized cell line

value: ENCBS525GEV at ENCODE; https://www.encodeproject.org/ENCBS525GEV/


title: ChIP-seq from HEK293 (ENCLB449ZZB)

description:
https://www.encodeproject.org/experiments/ENCSR803JLV/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-IKZF2 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR803JLV
assay title: ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-31
lab: Michael Snyder, Stanford
library encode accession: ENCLB449ZZB
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-IKZF2 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-IKZF2 under the control of a CMV promoter.

value: ENCBS404QSS at ENCODE; https://www.encodeproject.org/ENCBS404QSS/


title: eCLIP from HepG2 (ENCLB828TBY)

description:
https://www.encodeproject.org/experiments/ENCSR821VMD/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on HepG2 against AUH
experiment encode accession: ENCSR821VMD
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB828TBY
size range: 175-300

value: Control

value: child

value: 15 year

value: male

value: Gene Yeo, UCSD

value: hepatocellular carcinoma

value: ENCBS582KNJ at ENCODE; https://www.encodeproject.org/ENCBS582KNJ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: ChIP-seq from K562 (ENCLB428JWA)

description:
https://www.encodeproject.org/experiments/ENCSR801RPW/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-GTF2A2 ChIP-seq on human K562
experiment encode accession: ENCSR801RPW
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR492SGS
encode release date: 2016-08-24
lab: Michael Snyder, Stanford
library encode accession: ENCLB428JWA

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-GTF2A2 fusion protein

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to GTF2A2

value: adult

value: 53 year

value: female

value: Kevin White, UChicago

value: chronic myelogenous leukemia (CML)

value: ENCBS839DWI at ENCODE; https://www.encodeproject.org/ENCBS839DWI/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_GZ87; http://web.expasy.org/cellosaurus/CVCL_GZ87


title: ChIP-seq from K562 (ENCLB754JCU)

description:
https://www.encodeproject.org/experiments/ENCSR818DQV/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-MAFG ChIP-seq on human K562
experiment encode accession: ENCSR818DQV
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR727UQK
encode release date: 2016-01-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB754JCU
size range: 450-650

value: eGFP-MAFG

value: immortalized cell line

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to MAFG

value: ENCBS584ZNF at ENCODE; https://www.encodeproject.org/ENCBS584ZNF/

value: ENCODE dbxrefs Cellosaurus CVCL_AW34; http://web.expasy.org/cellosaurus/CVCL_AW34


title: ChIP-seq from K562 (ENCLB086WYJ)

description:
https://www.encodeproject.org/experiments/ENCSR801RPW/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-GTF2A2 ChIP-seq on human K562
experiment encode accession: ENCSR801RPW
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR492SGS
encode release date: 2016-08-24
lab: Michael Snyder, Stanford
library encode accession: ENCLB086WYJ

value: ENCBS656LOQ at ENCODE; https://www.encodeproject.org/ENCBS656LOQ/


title: eCLIP from K562 (ENCLB395FRD)

description:
https://www.encodeproject.org/experiments/ENCSR800LOQ/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on K562 against TNRC6A
experiment encode accession: ENCSR800LOQ
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB395FRD
size range: 175-300

value: Control

value: Gene Yeo, UCSD

value: ENCBS489LOC at ENCODE; https://www.encodeproject.org/ENCBS489LOC/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004


title: ChIP-seq from HEK293 (ENCLB408AVE)

description:
https://www.encodeproject.org/experiments/ENCSR803JLV/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-IKZF2 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR803JLV
assay title: ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-31
lab: Michael Snyder, Stanford
library encode accession: ENCLB408AVE
size range: 450-650

value: HEK293 cell line stably expressing N-terminal tagged eGFP-IKZF2 under the control of a CMV promoter.

value: unknown

value: embryonic

value: Michael Snyder, Stanford

value: ENCBS822XRF at ENCODE; https://www.encodeproject.org/ENCBS822XRF/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HepG2 (ENCLB830AOA)

description:
https://www.encodeproject.org/experiments/ENCSR799GOY/
***************
biological replicate number: 1
technical replicate number: 1
description: YBX1 ChIP-seq on human HepG2
experiment encode accession: ENCSR799GOY
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR121CWV
encode release date: 2016-09-01
lab: Michael Snyder, Stanford
library encode accession: ENCLB830AOA
size range: 450-650

value: child

value: 15 year

value: male

value: hepatocellular carcinoma

value: ENCBS983YXQ at ENCODE; https://www.encodeproject.org/ENCBS983YXQ/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027


title: eCLIP from HepG2 (ENCLB762SQK)

description:
https://www.encodeproject.org/experiments/ENCSR799EKA/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on HepG2 against RBFOX2
experiment encode accession: ENCSR799EKA
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB762SQK
size range: 175-300

value: Control

value: immortalized cell line

value: ENCBS998QYV at ENCODE; https://www.encodeproject.org/ENCBS998QYV/

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: ChIP-seq from K562 (ENCLB829ZPM)

description:
https://www.encodeproject.org/experiments/ENCSR798ILC/
***************
biological replicate number: 1
technical replicate number: 1
description: NCOR1 ChIP-seq on human K562
experiment encode accession: ENCSR798ILC
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI
encode release date: 2016-11-30
lab: Michael Snyder, Stanford
library encode accession: ENCLB829ZPM
size range: 450-650

value: adult

value: 53 year

value: female

value: chronic myelogenous leukemia (CML)

value: ENCBS697XFI at ENCODE; https://www.encodeproject.org/ENCBS697XFI/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004


title: ChIP-seq from K562 (ENCLB732JMK)

description:
https://www.encodeproject.org/experiments/ENCSR798ILC/
***************
biological replicate number: 2
technical replicate number: 1
description: NCOR1 ChIP-seq on human K562
experiment encode accession: ENCSR798ILC
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR173USI
encode release date: 2016-11-30
lab: Michael Snyder, Stanford
library encode accession: ENCLB732JMK
size range: 450-650

value: Michael Snyder, Stanford

value: ENCBS288EEL at ENCODE; https://www.encodeproject.org/ENCBS288EEL/


title: ChIP-seq from HepG2 (ENCLB724OTH)

description:
https://www.encodeproject.org/experiments/ENCSR799GOY/
***************
biological replicate number: 2
technical replicate number: 1
description: YBX1 ChIP-seq on human HepG2
experiment encode accession: ENCSR799GOY
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR121CWV
encode release date: 2016-09-01
lab: Michael Snyder, Stanford
library encode accession: ENCLB724OTH
size range: 450-650

value: child

value: 15 year

value: male

value: hepatocellular carcinoma

value: ENCBS515KFV at ENCODE; https://www.encodeproject.org/ENCBS515KFV/


title: ChIP-seq from K562 (ENCLB021WRW)

description:
https://www.encodeproject.org/experiments/ENCSR787RVK/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-TSC22D4 ChIP-seq on human K562
experiment encode accession: ENCSR787RVK
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR298QDM
encode release date: 2016-03-02
lab: Michael Snyder, Stanford
library encode accession: ENCLB021WRW
size range: 450-650

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-TSC22D4 fusion protein

value: immortalized cell line

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to TSC22D4

value: Kevin White, UChicago

value: ENCBS340PVD at ENCODE; https://www.encodeproject.org/ENCBS340PVD/

value: ENCODE dbxrefs Cellosaurus CVCL_AW46; http://web.expasy.org/cellosaurus/CVCL_AW46


title: ChIP-seq from MCF-7 (ENCLB614MWF)

description:
https://www.encodeproject.org/experiments/ENCSR788XNX/
***************
biological replicate number: 1
technical replicate number: 1
description: RFX1 ChIP-seq on human MCF-7
experiment encode accession: ENCSR788XNX
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR217LRF
encode release date: 2016-06-23
lab: Michael Snyder, Stanford
library encode accession: ENCLB614MWF
size range: 450-650

source_name: Homo sapiens MCF-7 immortalized cell line

value: adult

value: 69 year

value: female

value: breast cancer (adenocarcinoma)

value: ENCBS959SHH at ENCODE; https://www.encodeproject.org/ENCBS959SHH/

value: Derived from ENCODE donor ENCDO000AAE; https://www.encodeproject.org/ENCDO000AAE/

value: ENCODE dbxrefs Cellosaurus CVCL_0031; http://web.expasy.org/cellosaurus/CVCL_0031


title: ChIP-seq from HEK293 (ENCLB182EFD)

description:
https://www.encodeproject.org/experiments/ENCSR782QKO/
***************
biological replicate number: 1
technical replicate number: 3
description: Input ChIP-seq on eGFP-MAZ tagged human HEK293 cells.
experiment encode accession: ENCSR782QKO
assay title: ChIP-seq
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB182EFD
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-MAZ fusion protein

value: Control

value: HEK293 cell line stably expressing N-terminal tagged eGFP-MAZ under the control of a CMV promoter.

value: embryonic

value: unknown

value: Michael Snyder, Stanford

value: ENCBS373QTO at ENCODE; https://www.encodeproject.org/ENCBS373QTO/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from K562 (ENCLB356AAP)

description:
https://www.encodeproject.org/experiments/ENCSR781GAA/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on human eGFP-ID3 tagged K562 cell line.
experiment encode accession: ENCSR781GAA
assay title: ChIP-seq
encode release date: 2016-02-16
lab: Michael Snyder, Stanford
library encode accession: ENCLB356AAP
size range: 450-650

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-ID3 fusion protein

value: immortalized cell line

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to ID3

value: 53 year

value: Kevin White, UChicago

value: chronic myelogenous leukemia (CML)

value: ENCBS579QSJ at ENCODE; https://www.encodeproject.org/ENCBS579QSJ/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_AW26; http://web.expasy.org/cellosaurus/CVCL_AW26


title: ChIP-seq from HEK293 (ENCLB118GGT)

description:
https://www.encodeproject.org/experiments/ENCSR777YSB/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZNF781 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR777YSB
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB118GGT
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZNF781 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZNF781 under the control of a CMV promoter.

value: female

value: ENCBS393FBB at ENCODE; https://www.encodeproject.org/ENCBS393FBB/


title: ChIP-seq from K562 (ENCLB868ABL)

description:
https://www.encodeproject.org/experiments/ENCSR776RXA/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on human eGFP-POLR2H tagged K562 cell ine.
experiment encode accession: ENCSR776RXA
assay title: ChIP-seq
encode release date: 2016-08-03
lab: Michael Snyder, Stanford
library encode accession: ENCLB868ABL

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-POLR2H fusion protein

value: Control

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to POLR2H

value: adult

value: ENCBS687TWN at ENCODE; https://www.encodeproject.org/ENCBS687TWN/

value: ENCODE dbxrefs Cellosaurus CVCL_GZ93; http://web.expasy.org/cellosaurus/CVCL_GZ93


title: ChIP-seq from MCF-7 (ENCLB401WOW)

description:
https://www.encodeproject.org/experiments/ENCSR788XNX/
***************
biological replicate number: 2
technical replicate number: 1
description: RFX1 ChIP-seq on human MCF-7
experiment encode accession: ENCSR788XNX
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR217LRF
encode release date: 2016-06-23
lab: Michael Snyder, Stanford
library encode accession: ENCLB401WOW
size range: 450-650

value: 69 year

value: Michael Snyder, Stanford

value: breast cancer (adenocarcinoma)

value: ENCBS670IYV at ENCODE; https://www.encodeproject.org/ENCBS670IYV/

value: Derived from ENCODE donor ENCDO000AAE; https://www.encodeproject.org/ENCDO000AAE/

value: ENCODE dbxrefs Cellosaurus CVCL_0031; http://web.expasy.org/cellosaurus/CVCL_0031


title: eCLIP from K562 (ENCLB689QLK)

description:
https://www.encodeproject.org/experiments/ENCSR774RFN/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on K562 against FXR1
experiment encode accession: ENCSR774RFN
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR562BJW
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB689QLK
size range: 175-300

value: immortalized cell line

value: 53 year

value: chronic myelogenous leukemia (CML)

value: Gene Yeo, UCSD

value: ENCBS081NLE at ENCODE; https://www.encodeproject.org/ENCBS081NLE/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: ChIP-seq from HEK293 (ENCLB665BDQ)

description:
https://www.encodeproject.org/experiments/ENCSR773REP/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZBTB7A ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR773REP
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB665BDQ
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZBTB7A fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZBTB7A under the control of a CMV promoter.

value: embryonic

value: female

value: unknown

value: ENCBS241SWW at ENCODE; https://www.encodeproject.org/ENCBS241SWW/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB865YZL)

description:
https://www.encodeproject.org/experiments/ENCSR777YSB/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZNF781 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR777YSB
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB865YZL
size range: 450-650

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZNF781 under the control of a CMV promoter.

value: Michael Snyder, Stanford

value: ENCBS771HHP at ENCODE; https://www.encodeproject.org/ENCBS771HHP/


title: ChIP-seq from HEK293 (ENCLB382ZJT)

description:
https://www.encodeproject.org/experiments/ENCSR773REP/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZBTB7A ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR773REP
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB382ZJT
size range: 450-650

value: ENCBS628NYX at ENCODE; https://www.encodeproject.org/ENCBS628NYX/


title: eCLIP from HepG2 (ENCLB651XZA)

description:
https://www.encodeproject.org/experiments/ENCSR773KRC/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on HepG2 against SRSF9
experiment encode accession: ENCSR773KRC
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR060VZF
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB651XZA
size range: 175-300

value: immortalized cell line

value: child

value: 15 year

value: male

value: hepatocellular carcinoma

value: ENCBS547JWV at ENCODE; https://www.encodeproject.org/ENCBS547JWV/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027


title: eCLIP from HepG2 (ENCLB383HSP)

description:
https://www.encodeproject.org/experiments/ENCSR773KRC/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on HepG2 against SRSF9
experiment encode accession: ENCSR773KRC
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR060VZF
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB383HSP
size range: 175-300

value: Gene Yeo, UCSD

value: ENCBS537ADD at ENCODE; https://www.encodeproject.org/ENCBS537ADD/

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: eCLIP from K562 (ENCLB864ZXF)

description:
https://www.encodeproject.org/experiments/ENCSR774RFN/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on K562 against FXR1
experiment encode accession: ENCSR774RFN
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR562BJW
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB864ZXF
size range: 175-300

value: adult

value: 53 year

value: female

value: chronic myelogenous leukemia (CML)

value: ENCBS831COV at ENCODE; https://www.encodeproject.org/ENCBS831COV/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004


title: ChIP-seq from K562 (ENCLB738KFG)

description:
https://www.encodeproject.org/experiments/ENCSR772EEN/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-RELA ChIP-seq on human K562
experiment encode accession: ENCSR772EEN
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR545WDI
encode release date: 2016-01-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB738KFG
size range: 450-650

source_name: Homo sapiens K562 immortalized cell line stably expressing C-terminal eGFP-RELA fusion protein

value: eGFP-RELA

value: immortalized cell line

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to RELA

value: Kevin White, UChicago

value: ENCBS450AAA at ENCODE; https://www.encodeproject.org/ENCBS450AAA/

value: ENCODE dbxrefs Cellosaurus CVCL_AW41; http://web.expasy.org/cellosaurus/CVCL_AW41

value: ENCODE dbxrefs K562; http://genome.cse.ucsc.edu/cgi-bin/hgEncodeVocab?ra=encode/cv.ra&term=K562


title: ChIP-seq from K562 (ENCLB998PQU)

description:
https://www.encodeproject.org/experiments/ENCSR772EEN/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-RELA ChIP-seq on human K562
experiment encode accession: ENCSR772EEN
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR545WDI
encode release date: 2016-01-14
lab: Michael Snyder, Stanford
library encode accession: ENCLB998PQU
size range: 450-650

value: ENCBS394AAA at ENCODE; https://www.encodeproject.org/ENCBS394AAA/


title: ChIP-seq from K562 (ENCLB483YWT)

description:
https://www.encodeproject.org/experiments/ENCSR787RVK/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-TSC22D4 ChIP-seq on human K562
experiment encode accession: ENCSR787RVK
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR298QDM
encode release date: 2016-03-02
lab: Michael Snyder, Stanford
library encode accession: ENCLB483YWT
size range: 450-650

value: K562 cell line stably expressing a C-terminal LAP-tag containing eGFP, fused to TSC22D4

value: ENCBS528FGG at ENCODE; https://www.encodeproject.org/ENCBS528FGG/

value: ENCODE dbxrefs Cellosaurus CVCL_AW46; http://web.expasy.org/cellosaurus/CVCL_AW46


title: ChIP-seq from HepG2 (ENCLB724LMY)

description:
https://www.encodeproject.org/experiments/ENCSR770GTP/
***************
biological replicate number: 1
technical replicate number: 1
description: rabbit-IgG-control ChIP-seq on human HepG2
experiment encode accession: ENCSR770GTP
assay title: ChIP-seq
encode release date: 2014-07-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB724LMY
size range: 450-650

value: Control

value: Hepatocellular carcinoma

value: child

value: 15 year

value: male

value: Michael Snyder, Stanford

value: hepatocellular carcinoma

value: ENCBS560TQP at ENCODE; https://www.encodeproject.org/ENCBS560TQP/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: ChIP-seq from HEK293 (ENCLB175NHV)

description:
https://www.encodeproject.org/experiments/ENCSR770PQN/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-BCL11B ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR770PQN
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB175NHV
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-BCL11B fusion protein

value: immortalized cell line

value: HEK293 cell line stably expressing N-terminal tagged eGFP-BCL11B under the control of a CMV promoter.

value: embryonic

value: unknown

value: female

value: ENCBS923OML at ENCODE; https://www.encodeproject.org/ENCBS923OML/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB369RII)

description:
https://www.encodeproject.org/experiments/ENCSR770PQN/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-BCL11B ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR770PQN
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB369RII
size range: 450-650

value: ENCBS395FBP at ENCODE; https://www.encodeproject.org/ENCBS395FBP/


title: ChIP-seq from HepG2 (ENCLB507TWK)

description:
https://www.encodeproject.org/experiments/ENCSR770GTP/
***************
biological replicate number: 2
technical replicate number: 1
description: rabbit-IgG-control ChIP-seq on human HepG2
experiment encode accession: ENCSR770GTP
assay title: ChIP-seq
encode release date: 2014-07-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB507TWK
size range: 450-650

value: Control

value: Hepatocellular carcinoma

value: child

value: ENCBS716YFX at ENCODE; https://www.encodeproject.org/ENCBS716YFX/


title: eCLIP from HepG2 (ENCLB352MVW)

description:
https://www.encodeproject.org/experiments/ENCSR769UEW/
***************
biological replicate number: 2
technical replicate number: 1
description: eCLIP experiment on HepG2 against HNRNPA1
experiment encode accession: ENCSR769UEW
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR110XNS
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB352MVW
size range: 175-300

value: 15 year

value: male

value: Gene Yeo, UCSD

value: hepatocellular carcinoma

value: ENCBS465DEI at ENCODE; https://www.encodeproject.org/ENCBS465DEI/


title: ChIP-seq from HEK293 (ENCLB930DBM)

description:
https://www.encodeproject.org/experiments/ENCSR769JRS/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-AEBP2 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR769JRS
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB930DBM
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-AEBP2 fusion protein

value: immortalized cell line

value: HEK293 cell line stably expressing N-terminal tagged eGFP-AEBP2 under the control of a CMV promoter.

value: Michael Snyder, Stanford

value: ENCBS638MCL at ENCODE; https://www.encodeproject.org/ENCBS638MCL/


title: eCLIP from HepG2 (ENCLB919ECK)

description:
https://www.encodeproject.org/experiments/ENCSR769UEW/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP experiment on HepG2 against HNRNPA1
experiment encode accession: ENCSR769UEW
assay title: eCLIP
assembly: GRCh38, hg19
possible controls: ENCSR110XNS
encode release date: 2015-07-15
lab: Gene Yeo, UCSD
library encode accession: ENCLB919ECK
size range: 175-300

value: ENCBS990SBY at ENCODE; https://www.encodeproject.org/ENCBS990SBY/

value: Derived from ENCODE donor ENCDO000AAC; https://www.encodeproject.org/ENCDO000AAC/

value: ENCODE dbxrefs Cellosaurus CVCL_0027; http://web.expasy.org/cellosaurus/CVCL_0027

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx


title: ChIP-seq from HEK293 (ENCLB885RXU)

description:
https://www.encodeproject.org/experiments/ENCSR769JRS/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-AEBP2 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR769JRS
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB885RXU
size range: 450-650

value: embryonic

value: unknown

value: female

value: ENCBS715MMR at ENCODE; https://www.encodeproject.org/ENCBS715MMR/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB398GJS)

description:
https://www.encodeproject.org/experiments/ENCSR768LIO/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-OVOL3 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR768LIO
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB398GJS
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-OVOL3 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-OVOL3 under the control of a CMV promoter.

value: ENCBS294AQJ at ENCODE; https://www.encodeproject.org/ENCBS294AQJ/


title: ChIP-seq from HEK293 (ENCLB100RZO)

description:
https://www.encodeproject.org/experiments/ENCSR768LIO/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-OVOL3 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR768LIO
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB100RZO
size range: 450-650

value: ENCBS465UQI at ENCODE; https://www.encodeproject.org/ENCBS465UQI/


title: ChIP-seq from HeLa-S3 (ENCLB007GPJ)

description:
https://www.encodeproject.org/experiments/ENCSR760PBD/
***************
biological replicate number: 2
technical replicate number: 1
description: Control ChIP-seq on human HeLa-S3
experiment encode accession: ENCSR760PBD
assay title: ChIP-seq
encode release date: 2014-07-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB007GPJ
size range: 450-650

source_name: Homo sapiens HeLa-S3 immortalized cell line

value: Control

value: Cervical adenocarcinoma

value: adult

value: 31 year

value: cervical adenocarcinoma

value: ENCBS577WSP at ENCODE; https://www.encodeproject.org/ENCBS577WSP/

value: Derived from ENCODE donor ENCDO000AAB; https://www.encodeproject.org/ENCDO000AAB/

value: ENCODE dbxrefs Cellosaurus CVCL_0058; http://web.expasy.org/cellosaurus/CVCL_0058

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-2.2.aspx


title: ChIP-seq from HEK293 (ENCLB000SME)

description:
https://www.encodeproject.org/experiments/ENCSR767HOP/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZSCAN20 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR767HOP
assay title: ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-31
lab: Michael Snyder, Stanford
library encode accession: ENCLB000SME
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZSCAN20 fusion protein

value: immortalized cell line

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZSCAN20 under the control of a CMV promoter.

value: embryonic

value: Michael Snyder, Stanford

value: ENCBS712GXO at ENCODE; https://www.encodeproject.org/ENCBS712GXO/


title: ChIP-seq from HEK293 (ENCLB238GBU)

description:
https://www.encodeproject.org/experiments/ENCSR768HOH/
***************
biological replicate number: 1
technical replicate number: 1
description: eGFP-ZNF324 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR768HOH
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB238GBU
size range: 450-650

source_name: Homo sapiens HEK293 immortalized cell line derived from HEK293 stably expressing N-terminal eGFP-ZNF324 fusion protein

value: HEK293 cell line stably expressing N-terminal tagged eGFP-ZNF324 under the control of a CMV promoter.

value: female

value: unknown

value: ENCBS088ZVR at ENCODE; https://www.encodeproject.org/ENCBS088ZVR/

value: Derived from ENCODE donor ENCDO000ABF; https://www.encodeproject.org/ENCDO000ABF/


title: ChIP-seq from HEK293 (ENCLB318VCK)

description:
https://www.encodeproject.org/experiments/ENCSR767HOP/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZSCAN20 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR767HOP
assay title: ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-31
lab: Michael Snyder, Stanford
library encode accession: ENCLB318VCK
size range: 450-650

value: ENCBS901GWE at ENCODE; https://www.encodeproject.org/ENCBS901GWE/


title: ChIP-seq from HeLa-S3 (ENCLB877YFR)

description:
https://www.encodeproject.org/experiments/ENCSR760PBD/
***************
biological replicate number: 3
technical replicate number: 1
description: Control ChIP-seq on human HeLa-S3
experiment encode accession: ENCSR760PBD
assay title: ChIP-seq
encode release date: 2014-07-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB877YFR
size range: 450-650

value: Control

value: Cervical adenocarcinoma

value: adult

value: 31 year

value: ENCBS748HNU at ENCODE; https://www.encodeproject.org/ENCBS748HNU/


title: ChIP-seq from HEK293 (ENCLB107BZP)

description:
https://www.encodeproject.org/experiments/ENCSR768HOH/
***************
biological replicate number: 2
technical replicate number: 1
description: eGFP-ZNF324 ChIP-seq on human HEK293 cells.
experiment encode accession: ENCSR768HOH
assay title: ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR007GUS, ENCSR049NDP, ENCSR110ZVM, ENCSR123TVS, ENCSR236FPN, ENCSR260MAS, ENCSR278MZO, ENCSR311DYU, ENCSR316OQD, ENCSR361UQO, ENCSR398UVH, ENCSR468NLK, ENCSR499OOH, ENCSR499QIO, ENCSR523KUQ, ENCSR537CWQ, ENCSR603CJM, ENCSR679WSJ, ENCSR736BTL, ENCSR782QKO, ENCSR840JVQ, ENCSR851FFP, ENCSR860UAT, ENCSR873PPH
encode release date: 2016-10-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB107BZP
size range: 450-650

value: ENCBS026LOR at ENCODE; https://www.encodeproject.org/ENCBS026LOR/


title: ChIP-seq from HeLa-S3 (ENCLB144SAX)

description:
https://www.encodeproject.org/experiments/ENCSR760PBD/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on human HeLa-S3
experiment encode accession: ENCSR760PBD
assay title: ChIP-seq
encode release date: 2014-07-07
lab: Michael Snyder, Stanford
library encode accession: ENCLB144SAX
size range: 450-650

value: immortalized cell line

value: cervical adenocarcinoma

value: ENCBS352IHZ at ENCODE; https://www.encodeproject.org/ENCBS352IHZ/

value: Derived from ENCODE donor ENCDO000AAB; https://www.encodeproject.org/ENCDO000AAB/

value: ENCODE dbxrefs Cellosaurus CVCL_0058; http://web.expasy.org/cellosaurus/CVCL_0058

value: ATCC sample source; http://www.atcc.org/Products/All/CCL-2.2.aspx


title: eCLIP from K562 (ENCLB394JOA)

description:
https://www.encodeproject.org/experiments/ENCSR760SFB/
***************
biological replicate number: 1
technical replicate number: 1
description: eCLIP control experiment on K562 against ILF3
experiment encode accession: ENCSR760SFB
assay title: eCLIP
assembly: GRCh38, hg19
encode release date: 2015-11-09
lab: Gene Yeo, UCSD
library encode accession: ENCLB394JOA
size range: 175-300

source_name: Homo sapiens K562 immortalized cell line

value: 53 year

value: female

value: Gene Yeo, UCSD

value: chronic myelogenous leukemia (CML)

value: ENCBS931MQO at ENCODE; https://www.encodeproject.org/ENCBS931MQO/

value: Derived from ENCODE donor ENCDO000AAD; https://www.encodeproject.org/ENCDO000AAD/

value: ENCODE dbxrefs Cellosaurus CVCL_0004; http://web.expasy.org/cellosaurus/CVCL_0004

value: ATCC sample source; http://www.atcc.org/Products/All/HB-8065.aspx