title: WGBS from liver (ENCLB847KLW)

description:
https://www.encodeproject.org/experiments/ENCSR788XSZ/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 14.5 day mouse liver
experiment encode accession: ENCSR788XSZ
assay title: WGBS
assembly: mm10
encode release date: 2014-09-03
lab: Joe Ecker, Salk
library encode accession: ENCLB847KLW
size range: 180-500

value: liver

value: Liver from embryonic 14.5 day mice

value: ENCBS194VTP at ENCODE; https://www.encodeproject.org/ENCBS194VTP/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from forebrain (ENCLB917HCP)

status: Public on Jun 22 2016

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR739DVM/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 11.5 day mouse forebrain
experiment encode accession: ENCSR739DVM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR024JAN
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB917HCP
size range: 300-500

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Mus musculus

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (11.5 days)

tag: antibody

value: forebrain

value: tissue

tag: description

value: Forebrain from 88 embyronic 11.5 day mice

tag: biosample encode accession

tag: age

tag: dev stage

value: embryonic

tag: Sex

value: pooled male and female

tag: health state

value: healthy

tag: lab

value: Len Pennacchio, LBNL

tag: link

value: ENCBS720JOH at ENCODE; https://www.encodeproject.org/ENCBS720JOH/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB307NOQ)

description:
https://www.encodeproject.org/experiments/ENCSR380BBL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR380BBL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR077QRY
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB307NOQ
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (13.5 days)

value: heart

value: Heart from embryonic 13.5 day mice

value: ENCBS490ZWZ at ENCODE; https://www.encodeproject.org/ENCBS490ZWZ/


title: ChIP-seq from liver (ENCLB238BVB)

description:
https://www.encodeproject.org/experiments/ENCSR742WLX/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on embryonic 14.5 day mouse liver
experiment encode accession: ENCSR742WLX
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB238BVB
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap liver tissue mixed sex embryo (14.5 days)

value: Control


title: ChIP-seq from midbrain (ENCLB813SAX)

description:
https://www.encodeproject.org/experiments/ENCSR748XBE/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR748XBE
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB813SAX
size range: 300-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (15.5 days)

value: midbrain

value: Midbrain from 78 embryonic 15.5 day mice

value: ENCBS190ETJ at ENCODE; https://www.encodeproject.org/ENCBS190ETJ/


title: ChIP-seq from intestine (ENCLB580YZL)

description:
https://www.encodeproject.org/experiments/ENCSR389EYR/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on postnatal 0 day mouse intestine
experiment encode accession: ENCSR389EYR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR898PML
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB580YZL
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap intestine tissue mixed sex postnatal (0 days)

value: intestine

value: Intestine from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS044AAA at ENCODE; https://www.encodeproject.org/ENCBS044AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from forebrain (ENCLB477RDB)

description:
https://www.encodeproject.org/experiments/ENCSR739DVM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 11.5 day mouse forebrain
experiment encode accession: ENCSR739DVM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR024JAN
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB477RDB
size range: 300-500

value: forebrain

value: tissue

value: Forebrain from 109 embyronic 11.5 day mice

value: embryonic

value: pooled male and female

value: healthy

value: ENCBS745VOM at ENCODE; https://www.encodeproject.org/ENCBS745VOM/


title: ChIP-seq from hindbrain (ENCLB408JDI)

description:
https://www.encodeproject.org/experiments/ENCSR752KDM/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on embryonic 16.5 day mouse hindbrain
experiment encode accession: ENCSR752KDM
assay title: ChIP-seq
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB408JDI
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (16.5 days)

value: Control

value: hindbrain

value: Hindbrain from 37 embryonic 16.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS281ZLI at ENCODE; https://www.encodeproject.org/ENCBS281ZLI/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from forebrain (ENCLB939ULL)

description:
https://www.encodeproject.org/experiments/ENCSR736GVO/
***************
biological replicate number: 1
technical replicate number: 2,1
description: H3K27me3 ChIP-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR736GVO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR583ZEV
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB939ULL
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (13.5 days)

value: Forebrain from embryonic 13.5 day mice

value: ENCBS273RVL at ENCODE; https://www.encodeproject.org/ENCBS273RVL/


title: WGBS from embryonic facial prominence (ENCLB635NUD)

description:
https://www.encodeproject.org/experiments/ENCSR735PMJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 15.5 day mouse facial prominence
experiment encode accession: ENCSR735PMJ
assay title: WGBS
assembly: mm10
encode release date: 2015-06-23
lab: Joe Ecker, Salk
library encode accession: ENCLB635NUD
size range: 180-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (15.5 days)

value: embryonic facial prominence

value: Embryonic facial prominence from 78 embryonic 15.5 day mice

value: ENCBS543BPM at ENCODE; https://www.encodeproject.org/ENCBS543BPM/


title: ChIP-seq from heart (ENCLB735SGK)

description:
https://www.encodeproject.org/experiments/ENCSR377RKW/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 15.5 day mouse heart
experiment encode accession: ENCSR377RKW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR424WHM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB735SGK
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (15.5 days)

value: heart

value: tissue

value: Heart from 78 embryonic 15.5 day mice

value: ENCBS595EMK at ENCODE; https://www.encodeproject.org/ENCBS595EMK/


title: WGBS from embryonic facial prominence (ENCLB148FSK)

description:
https://www.encodeproject.org/experiments/ENCSR735PMJ/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 15.5 day mouse facial prominence
experiment encode accession: ENCSR735PMJ
assay title: WGBS
assembly: mm10
encode release date: 2015-06-23
lab: Joe Ecker, Salk
library encode accession: ENCLB148FSK
size range: 180-500

value: embryonic

value: pooled male and female

value: healthy


title: WGBS from embryonic facial prominence (ENCLB773WZA)

description:
https://www.encodeproject.org/experiments/ENCSR735PMJ/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 15.5 day mouse facial prominence
experiment encode accession: ENCSR735PMJ
assay title: WGBS
assembly: mm10
encode release date: 2015-06-23
lab: Joe Ecker, Salk
library encode accession: ENCLB773WZA
size range: 180-500

value: Embryonic facial prominence from 62 embryonic 15.5 day mice

value: ENCBS900XQR at ENCODE; https://www.encodeproject.org/ENCBS900XQR/


title: ChIP-seq from forebrain (ENCLB880PHV)

description:
https://www.encodeproject.org/experiments/ENCSR373TMR/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR373TMR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR583ZEV
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB880PHV
size range: 300-500

value: forebrain

value: Len Pennacchio, LBNL

value: ENCBS793ZRY at ENCODE; https://www.encodeproject.org/ENCBS793ZRY/


title: ChIP-seq from heart (ENCLB679GAV)

description:
https://www.encodeproject.org/experiments/ENCSR377RKW/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 15.5 day mouse heart
experiment encode accession: ENCSR377RKW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR424WHM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB679GAV
size range: 300-500

value: Heart from 62 embryonic 15.5 day mice

value: ENCBS909LOF at ENCODE; https://www.encodeproject.org/ENCBS909LOF/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from hindbrain (ENCLB875IUW)

description:
https://www.encodeproject.org/experiments/ENCSR734GST/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR734GST
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB875IUW
size range: 180-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (13.5 days)

value: hindbrain

value: Hindbrain from embryonic 13.5 day mice

value: ENCBS296PIR at ENCODE; https://www.encodeproject.org/ENCBS296PIR/


title: ChIP-seq from forebrain (ENCLB635CQS)

description:
https://www.encodeproject.org/experiments/ENCSR373TMR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR373TMR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR583ZEV
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB635CQS
size range: 300-500

value: tissue

value: Forebrain from embryonic 13.5 day mice

value: ENCBS273RVL at ENCODE; https://www.encodeproject.org/ENCBS273RVL/


title: WGBS from hindbrain (ENCLB783UIF)

description:
https://www.encodeproject.org/experiments/ENCSR734GST/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR734GST
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB783UIF
size range: 180-500

value: embryonic

value: ENCBS052EWC at ENCODE; https://www.encodeproject.org/ENCBS052EWC/


title: ChIP-seq from liver (ENCLB807REU)

description:
https://www.encodeproject.org/experiments/ENCSR742WLX/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on embryonic 14.5 day mouse liver
experiment encode accession: ENCSR742WLX
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB807REU
size range: 300-500

value: Control

value: liver

value: Liver from embryonic 14.5 day mice

value: pooled male and female

value: healthy

value: ENCBS096GAJ at ENCODE; https://www.encodeproject.org/ENCBS096GAJ/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: WGBS from hindbrain (ENCLB773DMF)

description:
https://www.encodeproject.org/experiments/ENCSR734GST/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR734GST
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB773DMF
size range: 180-500

value: Len Pennacchio, LBNL


title: WGBS from hindbrain (ENCLB266WJN)

description:
https://www.encodeproject.org/experiments/ENCSR734GST/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR734GST
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB266WJN
size range: 180-500

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB254KNS)

description:
https://www.encodeproject.org/experiments/ENCSR373LNE/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR373LNE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB254KNS
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (16.5 days)

value: heart

value: Heart from 41 embyonic 16.5 day mice

value: ENCBS217XWR at ENCODE; https://www.encodeproject.org/ENCBS217XWR/


title: ChIP-seq from lung (ENCLB826PIE)

description:
https://www.encodeproject.org/experiments/ENCSR371AKO/
***************
biological replicate number: 2
technical replicate number: 1,2,3
description: Control ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR371AKO
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB826PIE
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 4000

source_name: Mus musculus strain B6NCrl lung tissue mixed sex embryo (15.5 days)

value: lung

value: tissue

value: Lung from 62 embryonic 15.5 day mice

value: ENCBS217WPC at ENCODE; https://www.encodeproject.org/ENCBS217WPC/


title: ChIP-seq from heart (ENCLB916KNX)

description:
https://www.encodeproject.org/experiments/ENCSR373LNE/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR373LNE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB916KNX
size range: 300-500

value: Heart pooled from embyonic 16.5 day mice

value: embryonic

value: ENCBS955JPC at ENCODE; https://www.encodeproject.org/ENCBS955JPC/


title: ChIP-seq from embryonic facial prominence (ENCLB597BQX)

description:
https://www.encodeproject.org/experiments/ENCSR706SZI/
***************
biological replicate number: 1
technical replicate number: 1,3,2
description: H3K9me3 ChIP-seq on embryonic 14.5 day mouse facial prominence
experiment encode accession: ENCSR706SZI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR329ZEN
encode release date: 2016-03-17
lab: Bing Ren, UCSD
library encode accession: ENCLB597BQX
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap embryonic facial prominence tissue mixed sex embryo (14.5 days)

value: embryonic facial prominence

value: Craniofacial prominence from 24 embryonic 14.5 day mice

value: ENCBS012AAA at ENCODE; https://www.encodeproject.org/ENCBS012AAA/


title: ChIP-seq from lung (ENCLB030DAT)

description:
https://www.encodeproject.org/experiments/ENCSR371AKO/
***************
biological replicate number: 1
technical replicate number: 1,2,3
description: Control ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR371AKO
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB030DAT
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 4000

value: Control

value: Lung from 78 embryonic 15.5 day mice

value: pooled male and female

value: healthy

value: ENCBS467HSM at ENCODE; https://www.encodeproject.org/ENCBS467HSM/


title: ChIP-seq from forebrain (ENCLB232OYC)

description:
https://www.encodeproject.org/experiments/ENCSR369RBO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on postnatal 0 day mouse forebrain
experiment encode accession: ENCSR369RBO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR398NCK
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB232OYC
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap forebrain tissue mixed sex postnatal (0 days)

value: forebrain

value: Forebrain from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: Len Pennacchio, LBNL

value: ENCBS038AAA at ENCODE; https://www.encodeproject.org/ENCBS038AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from hindbrain (ENCLB090XTP)

description:
https://www.encodeproject.org/experiments/ENCSR718CAJ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse hindbrain
experiment encode accession: ENCSR718CAJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR752KDM
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB090XTP
size range: 300-500

value: hindbrain

value: tissue

value: Hindbrain from 37 embryonic 16.5 day mice

value: embryonic

value: ENCBS281ZLI at ENCODE; https://www.encodeproject.org/ENCBS281ZLI/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from embryonic facial prominence (ENCLB729QZG)

description:
https://www.encodeproject.org/experiments/ENCSR706SZI/
***************
biological replicate number: 2
technical replicate number: 1,3,2
description: H3K9me3 ChIP-seq on embryonic 14.5 day mouse facial prominence
experiment encode accession: ENCSR706SZI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR329ZEN
encode release date: 2016-03-17
lab: Bing Ren, UCSD
library encode accession: ENCLB729QZG
size range: 300-500

value: embryonic facial prominence

value: Craniofacial prominence from 34 embryonic 14.5 day mice

value: ENCBS024AAA at ENCODE; https://www.encodeproject.org/ENCBS024AAA/


title: ChIP-seq from embryonic facial prominence (ENCLB876FNC)

description:
https://www.encodeproject.org/experiments/ENCSR701GKO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 11.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR701GKO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR068AQC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB876FNC
size range: 300-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (11.5 days)

value: Craniofacial prominence from 109 embyronic 11.5 day mice

value: pooled male and female

value: healthy

value: ENCBS141GPQ at ENCODE; https://www.encodeproject.org/ENCBS141GPQ/


title: ChIP-seq from forebrain (ENCLB124RFH)

description:
https://www.encodeproject.org/experiments/ENCSR369RBO/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on postnatal 0 day mouse forebrain
experiment encode accession: ENCSR369RBO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR398NCK
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB124RFH
size range: 300-500

value: forebrain

value: Forebrain of pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS554AAA at ENCODE; https://www.encodeproject.org/ENCBS554AAA/


title: ChIP-seq from embryonic facial prominence (ENCLB938SQE)

description:
https://www.encodeproject.org/experiments/ENCSR701GKO/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 11.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR701GKO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR068AQC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB938SQE
size range: 300-500

value: tissue

value: Craniofacial prominence from 88 embyronic 11.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS468NAL at ENCODE; https://www.encodeproject.org/ENCBS468NAL/


title: WGBS from limb (ENCLB214HPW)

description:
https://www.encodeproject.org/experiments/ENCSR700FCF/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR700FCF
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB214HPW
size range: 180-500

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (13.5 days)

value: limb

value: Limb from embryonic 13.5 day mice

value: embryonic

value: ENCBS176PGP at ENCODE; https://www.encodeproject.org/ENCBS176PGP/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from embryonic facial prominence (ENCLB174ICU)

description:
https://www.encodeproject.org/experiments/ENCSR735PMJ/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 15.5 day mouse facial prominence
experiment encode accession: ENCSR735PMJ
assay title: WGBS
assembly: mm10
encode release date: 2015-06-23
lab: Joe Ecker, Salk
library encode accession: ENCLB174ICU
size range: 180-500

value: embryonic facial prominence

value: Embryonic facial prominence from 62 embryonic 15.5 day mice

value: pooled male and female

value: ENCBS900XQR at ENCODE; https://www.encodeproject.org/ENCBS900XQR/


title: ChIP-seq from kidney (ENCLB191WQP)

description:
https://www.encodeproject.org/experiments/ENCSR362PBD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on postnatal 0 day mouse kidney
experiment encode accession: ENCSR362PBD
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR178MLS
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB191WQP
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap kidney tissue mixed sex postnatal (0 days)

value: kidney

value: Kidney from 15 postnatal 0 day mice

value: healthy

value: ENCBS046AAA at ENCODE; https://www.encodeproject.org/ENCBS046AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from intestine (ENCLB218CYG)

description:
https://www.encodeproject.org/experiments/ENCSR698WCJ/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K9me3 ChIP-seq on embryonic 14.5 day mouse intestine
experiment encode accession: ENCSR698WCJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR645QSY
encode release date: 2016-03-17
lab: Bing Ren, UCSD
library encode accession: ENCLB218CYG
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap intestine tissue mixed sex embryo (14.5 days)

value: intestine

value: tissue

value: Intestine from 34 embryonic 14.5 day mice

value: ENCBS020AAA at ENCODE; https://www.encodeproject.org/ENCBS020AAA/


title: WGBS from limb (ENCLB531NET)

description:
https://www.encodeproject.org/experiments/ENCSR700FCF/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR700FCF
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB531NET
size range: 180-500

value: limb

value: Limb from embryonic 13.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS896ZED at ENCODE; https://www.encodeproject.org/ENCBS896ZED/


title: WGBS from limb (ENCLB573UZM)

description:
https://www.encodeproject.org/experiments/ENCSR700FCF/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR700FCF
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB573UZM
size range: 180-500

value: embryonic

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from hindbrain (ENCLB867HLX)

description:
https://www.encodeproject.org/experiments/ENCSR695FPP/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K4me1 ChIP-seq on embryonic 11.5 day mouse hindbrain
experiment encode accession: ENCSR695FPP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR563WKD
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB867HLX
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (11.5 days)

value: hindbrain

value: Hindbrain from 109 embyronic 11.5 day mice

value: pooled male and female

value: ENCBS199NDR at ENCODE; https://www.encodeproject.org/ENCBS199NDR/


title: WGBS from limb (ENCLB693RLI)

description:
https://www.encodeproject.org/experiments/ENCSR695BII/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR695BII
assay title: WGBS
assembly: mm10
encode release date: 2015-06-23
lab: Joe Ecker, Salk
library encode accession: ENCLB693RLI
size range: 180-500

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (15.5 days)

value: Limb from 62 embryonic 15.5 day mice

value: healthy

value: ENCBS696JKV at ENCODE; https://www.encodeproject.org/ENCBS696JKV/


title: WGBS from limb (ENCLB430DVJ)

description:
https://www.encodeproject.org/experiments/ENCSR695BII/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR695BII
assay title: WGBS
assembly: mm10
encode release date: 2015-06-23
lab: Joe Ecker, Salk
library encode accession: ENCLB430DVJ
size range: 180-500


title: ChIP-seq from intestine (ENCLB235TBZ)

description:
https://www.encodeproject.org/experiments/ENCSR698WCJ/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K9me3 ChIP-seq on embryonic 14.5 day mouse intestine
experiment encode accession: ENCSR698WCJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR645QSY
encode release date: 2016-03-17
lab: Bing Ren, UCSD
library encode accession: ENCLB235TBZ
size range: 300-500

value: intestine

value: Intestine from 24 embryonic 14.5 day mice

value: ENCBS008AAA at ENCODE; https://www.encodeproject.org/ENCBS008AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from kidney (ENCLB575PMM)

description:
https://www.encodeproject.org/experiments/ENCSR362PBD/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on postnatal 0 day mouse kidney
experiment encode accession: ENCSR362PBD
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR178MLS
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB575PMM
size range: 300-500

value: kidney

value: tissue

value: Kidney from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS562AAA at ENCODE; https://www.encodeproject.org/ENCBS562AAA/


title: ChIP-seq from hindbrain (ENCLB803WLX)

description:
https://www.encodeproject.org/experiments/ENCSR689NXE/
***************
biological replicate number: 2
technical replicate number: 1,2,3
description: H3K9me3 ChIP-seq on embryonic 14.5 day mouse hindbrain
experiment encode accession: ENCSR689NXE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR896PWV
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB803WLX
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex embryo (14.5 days)

value: hindbrain

value: Hindbrain from 34 embryonic 14.5 day mice

value: embryonic

value: Len Pennacchio, LBNL

value: ENCBS016AAA at ENCODE; https://www.encodeproject.org/ENCBS016AAA/


title: WGBS from limb (ENCLB878SZU)

description:
https://www.encodeproject.org/experiments/ENCSR695BII/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR695BII
assay title: WGBS
assembly: mm10
encode release date: 2015-06-23
lab: Joe Ecker, Salk
library encode accession: ENCLB878SZU
size range: 180-500

value: limb

value: Limb from 78 embryonic 15.5 day mice

value: pooled male and female

value: healthy

value: ENCBS735QNY at ENCODE; https://www.encodeproject.org/ENCBS735QNY/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from limb (ENCLB862QSR)

description:
https://www.encodeproject.org/experiments/ENCSR695BII/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR695BII
assay title: WGBS
assembly: mm10
encode release date: 2015-06-23
lab: Joe Ecker, Salk
library encode accession: ENCLB862QSR
size range: 180-500


title: WGBS from limb (ENCLB679UDU)

description:
https://www.encodeproject.org/experiments/ENCSR700FCF/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR700FCF
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB679UDU
size range: 180-500

value: Limb from embryonic 13.5 day mice

value: ENCBS176PGP at ENCODE; https://www.encodeproject.org/ENCBS176PGP/


title: ChIP-seq from heart (ENCLB901BTB)

description:
https://www.encodeproject.org/experiments/ENCSR360ANE/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR360ANE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR840PFW
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB901BTB
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex embryo (14.5 days)

value: heart

value: tissue

value: Heart from pooled embryonic 14.5 day mice

value: ENCBS563AAA at ENCODE; https://www.encodeproject.org/ENCBS563AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from hindbrain (ENCLB172WZZ)

description:
https://www.encodeproject.org/experiments/ENCSR695FPP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 11.5 day mouse hindbrain
experiment encode accession: ENCSR695FPP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR563WKD
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB172WZZ
size range: 300-500

value: hindbrain

value: Hindbrain from 88 embyronic 11.5 day mice

value: ENCBS976DPO at ENCODE; https://www.encodeproject.org/ENCBS976DPO/


title: ChIP-seq from kidney (ENCLB261BTS)

description:
https://www.encodeproject.org/experiments/ENCSR357JII/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 16.5 day mouse kidney
experiment encode accession: ENCSR357JII
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR642DUV
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB261BTS
size range: 300-500

source_name: Mus musculus strain B6NCrl kidney tissue mixed sex embryo (16.5 days)

value: kidney

value: Kidney from 41 embyonic 16.5 day mice

value: embryonic

value: Len Pennacchio, LBNL

value: ENCBS529OHA at ENCODE; https://www.encodeproject.org/ENCBS529OHA/


title: ChIP-seq from hindbrain (ENCLB831UUR)

description:
https://www.encodeproject.org/experiments/ENCSR689NXE/
***************
biological replicate number: 1
technical replicate number: 1,2,3
description: H3K9me3 ChIP-seq on embryonic 14.5 day mouse hindbrain
experiment encode accession: ENCSR689NXE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR896PWV
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB831UUR
size range: 300-500

value: Hindbrain from 24 embryonic 14.5 day mice

value: pooled male and female

value: healthy

value: ENCBS004AAA at ENCODE; https://www.encodeproject.org/ENCBS004AAA/


title: ChIP-seq from heart (ENCLB522AVY)

description:
https://www.encodeproject.org/experiments/ENCSR357OED/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR357OED
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR840PFW
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB522AVY
size range: 300-500

value: heart


title: ChIP-seq from heart (ENCLB991PMD)

description:
https://www.encodeproject.org/experiments/ENCSR685AMF/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR685AMF
assay title: ChIP-seq
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB991PMD
size range: 300-500

value: Control

value: tissue

value: Heart from 41 embyonic 16.5 day mice

value: ENCBS217XWR at ENCODE; https://www.encodeproject.org/ENCBS217XWR/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from kidney (ENCLB062KDE)

description:
https://www.encodeproject.org/experiments/ENCSR357JII/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 16.5 day mouse kidney
experiment encode accession: ENCSR357JII
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR642DUV
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB062KDE
size range: 300-500

value: Kidney pooled from embyonic 16.5 day mice

value: ENCBS519MUD at ENCODE; https://www.encodeproject.org/ENCBS519MUD/


title: ChIP-seq from lung (ENCLB377KIQ)

description:
https://www.encodeproject.org/experiments/ENCSR356LBC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on postnatal 0 day mouse lung
experiment encode accession: ENCSR356LBC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR241RIG
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB377KIQ
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap lung tissue mixed sex postnatal (0 days)

value: lung

value: Lung from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS042AAA at ENCODE; https://www.encodeproject.org/ENCBS042AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from heart (ENCLB201PLK)

description:
https://www.encodeproject.org/experiments/ENCSR357OED/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR357OED
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR840PFW
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB201PLK
size range: 300-500

value: Heart from pooled embryonic 14.5 day mice

value: embryonic

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS566AAA at ENCODE; https://www.encodeproject.org/ENCBS566AAA/


title: ChIP-seq from heart (ENCLB699GHD)

description:
https://www.encodeproject.org/experiments/ENCSR685AMF/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR685AMF
assay title: ChIP-seq
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB699GHD
size range: 300-500

value: Control

value: heart

value: tissue

value: Heart pooled from embyonic 16.5 day mice

value: healthy

value: ENCBS955JPC at ENCODE; https://www.encodeproject.org/ENCBS955JPC/


title: WGBS from liver (ENCLB096FSO)

description:
https://www.encodeproject.org/experiments/ENCSR660CKG/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR660CKG
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB096FSO
size range: 180-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (13.5 days)

value: liver

value: Liver from embryonic 13.5 day mice

value: ENCBS146FGW at ENCODE; https://www.encodeproject.org/ENCBS146FGW/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from liver (ENCLB596SGY)

description:
https://www.encodeproject.org/experiments/ENCSR660CKG/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR660CKG
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB596SGY
size range: 180-500


title: ChIP-seq from midbrain (ENCLB727JYK)

description:
https://www.encodeproject.org/experiments/ENCSR672ZXY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on postnatal 0 day mouse midbrain
experiment encode accession: ENCSR672ZXY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR889XXJ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB727JYK
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue mixed sex postnatal (0 days)

value: midbrain

value: Midbrain from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS555AAA at ENCODE; https://www.encodeproject.org/ENCBS555AAA/


title: ChIP-seq from lung (ENCLB702UTV)

description:
https://www.encodeproject.org/experiments/ENCSR356LBC/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on postnatal 0 day mouse lung
experiment encode accession: ENCSR356LBC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR241RIG
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB702UTV
size range: 300-500

value: lung

value: Lung from pooled postnatal 0 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS558AAA at ENCODE; https://www.encodeproject.org/ENCBS558AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from kidney (ENCLB425RFA)

description:
https://www.encodeproject.org/experiments/ENCSR669AQL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 14.5 day mouse kidney
experiment encode accession: ENCSR669AQL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR091DHJ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB425RFA
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap kidney tissue mixed sex embryo (14.5 days)

value: kidney

value: tissue

value: Kidney from pooled embryonic 14.5 day mice

value: embryonic

value: healthy

value: ENCBS565AAA at ENCODE; https://www.encodeproject.org/ENCBS565AAA/


title: WGBS from liver (ENCLB402OVM)

description:
https://www.encodeproject.org/experiments/ENCSR660CKG/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR660CKG
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB402OVM
size range: 180-500

value: liver

value: Liver from embryonic 13.5 day mice

value: ENCBS373XWZ at ENCODE; https://www.encodeproject.org/ENCBS373XWZ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from liver (ENCLB064DXB)

description:
https://www.encodeproject.org/experiments/ENCSR660CKG/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR660CKG
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB064DXB
size range: 180-500


title: ChIP-seq from hindbrain (ENCLB624KZI)

description:
https://www.encodeproject.org/experiments/ENCSR721MSV/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on postnatal 0 day mouse hindbrain
experiment encode accession: ENCSR721MSV
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR066SPF
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB624KZI
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex postnatal (0 days)

value: hindbrain

value: Hindbrain from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS040AAA at ENCODE; https://www.encodeproject.org/ENCBS040AAA/


title: microRNA-seq from limb (ENCLB483HAL)

description:
https://www.encodeproject.org/experiments/ENCSR354YFG/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR354YFG
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-18
lab: Ali Mortazavi, UCI
library encode accession: ENCLB483HAL
size range: <30

library_source: transcriptomic

molecule: total RNA

value: limb

value: Limb from embryonic 13.5 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS176PGP at ENCODE; https://www.encodeproject.org/ENCBS176PGP/


title: ChIP-seq from liver (ENCLB903MGH)

description:
https://www.encodeproject.org/experiments/ENCSR656AMS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on postnatal 0 day mouse liver
experiment encode accession: ENCSR656AMS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR617RDY
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB903MGH
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap liver tissue mixed sex postnatal (0 days)

value: tissue

value: Liver from 15 postnatal 0 day mice

value: ENCBS043AAA at ENCODE; https://www.encodeproject.org/ENCBS043AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from limb (ENCLB668EIG)

description:
https://www.encodeproject.org/experiments/ENCSR654VMK/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 11.5 day mouse limb
experiment encode accession: ENCSR654VMK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR949ZLW
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB668EIG
size range: 300-500

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (11.5 days)

value: Limb from 88 embyronic 11.5 day mice

value: embryonic

value: healthy

value: ENCBS681XPR at ENCODE; https://www.encodeproject.org/ENCBS681XPR/


title: ChIP-seq from kidney (ENCLB771VPH)

description:
https://www.encodeproject.org/experiments/ENCSR658TDS/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse kidney
experiment encode accession: ENCSR658TDS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR091DHJ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB771VPH
size range: 300-500

value: kidney

value: Kidney from pooled embryonic 14.5 day mice

value: ENCBS569AAA at ENCODE; https://www.encodeproject.org/ENCBS569AAA/


title: ChIP-seq from limb (ENCLB618UBX)

description:
https://www.encodeproject.org/experiments/ENCSR654VMK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 11.5 day mouse limb
experiment encode accession: ENCSR654VMK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR949ZLW
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB618UBX
size range: 300-500

value: Limb from 109 embyronic 11.5 day mice

value: ENCBS066IEL at ENCODE; https://www.encodeproject.org/ENCBS066IEL/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from kidney (ENCLB836TXP)

description:
https://www.encodeproject.org/experiments/ENCSR658TDS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse kidney
experiment encode accession: ENCSR658TDS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR091DHJ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB836TXP
size range: 300-500

value: pooled male and female

value: ENCBS565AAA at ENCODE; https://www.encodeproject.org/ENCBS565AAA/


title: ChIP-seq from kidney (ENCLB790EOI)

description:
https://www.encodeproject.org/experiments/ENCSR674PZU/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K4me1 ChIP-seq on postnatal 0 day mouse kidney
experiment encode accession: ENCSR674PZU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR178MLS
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB790EOI
size range: 300-500

value: Kidney from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: Len Pennacchio, LBNL

value: ENCBS046AAA at ENCODE; https://www.encodeproject.org/ENCBS046AAA/


title: WGBS from neural tube (ENCLB157NPV)

description:
https://www.encodeproject.org/experiments/ENCSR651PAZ/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR651PAZ
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB157NPV
size range: 180-500

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (13.5 days)

value: neural tube

value: tissue

value: Neural tube from embryonic 13.5 day mice

value: ENCBS956BQY at ENCODE; https://www.encodeproject.org/ENCBS956BQY/


title: microRNA-seq from limb (ENCLB601WBB)

description:
https://www.encodeproject.org/experiments/ENCSR354YFG/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR354YFG
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-18
lab: Ali Mortazavi, UCI
library encode accession: ENCLB601WBB
size range: <30

value: limb

value: Limb from embryonic 13.5 day mice

value: embryonic

value: healthy

value: ENCBS896ZED at ENCODE; https://www.encodeproject.org/ENCBS896ZED/


title: microRNA-seq from midbrain (ENCLB587AAL)

description:
https://www.encodeproject.org/experiments/ENCSR353XMS/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq  on postnatal 0 day mouse midbrain
experiment encode accession: ENCSR353XMS
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-18
lab: Ali Mortazavi, UCI
library encode accession: ENCLB587AAL
size range: <30

source_name: Mus musculus strain B6NCrl midbrain tissue postnatal (0 days)

value: midbrain

value: single midbrain from pup 3

value: not collected

value: Barbara Wold, Caltech

value: ENCBS960FNV at ENCODE; https://www.encodeproject.org/ENCBS960FNV/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from forebrain (ENCLB921BMQ)

description:
https://www.encodeproject.org/experiments/ENCSR352AWJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 16.5 day mouse forebrain
experiment encode accession: ENCSR352AWJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR587JRQ
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB921BMQ
size range: 300-500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (16.5 days)

value: forebrain

value: Forebrain pooled from embyonic 16.5 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS156DHU at ENCODE; https://www.encodeproject.org/ENCBS156DHU/


title: WGBS from neural tube (ENCLB428LJN)

description:
https://www.encodeproject.org/experiments/ENCSR651PAZ/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR651PAZ
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB428LJN
size range: 180-500

value: neural tube

value: tissue

value: Neural tube from embryonic 13.5 day mice

value: ENCBS549OYR at ENCODE; https://www.encodeproject.org/ENCBS549OYR/


title: WGBS from neural tube (ENCLB551IIN)

description:
https://www.encodeproject.org/experiments/ENCSR651PAZ/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR651PAZ
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB551IIN
size range: 180-500

value: embryonic

value: healthy


title: microRNA-seq from midbrain (ENCLB251GCH)

description:
https://www.encodeproject.org/experiments/ENCSR353XMS/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq  on postnatal 0 day mouse midbrain
experiment encode accession: ENCSR353XMS
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-18
lab: Ali Mortazavi, UCI
library encode accession: ENCLB251GCH
size range: <30

value: midbrain

value: single midbrain from pup 1

value: 0 day

value: postnatal

value: ENCBS169PZD at ENCODE; https://www.encodeproject.org/ENCBS169PZD/


title: ChIP-seq from liver (ENCLB901TIV)

description:
https://www.encodeproject.org/experiments/ENCSR656AMS/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K36me3 ChIP-seq on postnatal 0 day mouse liver
experiment encode accession: ENCSR656AMS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR617RDY
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB901TIV
size range: 300-500

value: liver

value: Liver from pooled postnatal 0 day mice

value: ENCBS559AAA at ENCODE; https://www.encodeproject.org/ENCBS559AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from forebrain (ENCLB772AMD)

description:
https://www.encodeproject.org/experiments/ENCSR352AWJ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 16.5 day mouse forebrain
experiment encode accession: ENCSR352AWJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR587JRQ
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB772AMD
size range: 300-500

value: forebrain

value: Forebrain from 41 embyonic 16.5 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS512LKA at ENCODE; https://www.encodeproject.org/ENCBS512LKA/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from midbrain (ENCLB485SKN)

description:
https://www.encodeproject.org/experiments/ENCSR347BFO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR347BFO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR748XBE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB485SKN
size range: 300-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (15.5 days)

value: tissue

value: Midbrain from 78 embryonic 15.5 day mice

value: embryonic

value: ENCBS190ETJ at ENCODE; https://www.encodeproject.org/ENCBS190ETJ/


title: ChIP-seq from hindbrain (ENCLB065RKZ)

description:
https://www.encodeproject.org/experiments/ENCSR349NIS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR349NIS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR545RUT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB065RKZ
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (13.5 days)

value: hindbrain

value: Hindbrain from embryonic 13.5 day mice

value: healthy

value: ENCBS052EWC at ENCODE; https://www.encodeproject.org/ENCBS052EWC/


title: total RNA-seq from liver (ENCLB673NRF)

description:
https://www.encodeproject.org/experiments/ENCSR648YEP/
***************
biological replicate number: 2
technical replicate number: 1
description: e12.5 liver
experiment encode accession: ENCSR648YEP
assay title: total RNA-seq
assembly: mm10
encode release date: 2016-05-03
lab: Barbara Wold, Caltech
library encode accession: ENCLB673NRF
size range: >200
spikeins used: /references/ENCSR884LPM/
nucleic acid starting quantity: 10.0
nucleic acid starting quantity units: ng

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (12.5 days)

value: liver

value: Liver from 88 embryonic 12.5 day mice

value: ENCBS479VPX at ENCODE; https://www.encodeproject.org/ENCBS479VPX/


title: total RNA-seq from forebrain (ENCLB214HEI)

description:
https://www.encodeproject.org/experiments/ENCSR647QBV/
***************
biological replicate number: 2
technical replicate number: 1
description: e12.5 forebrain
experiment encode accession: ENCSR647QBV
assay title: total RNA-seq
assembly: mm10
encode release date: 2016-05-03
lab: Barbara Wold, Caltech
library encode accession: ENCLB214HEI
size range: >200
spikeins used: /references/ENCSR884LPM/
nucleic acid starting quantity: 10.0
nucleic acid starting quantity units: ng

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (12.5 days)

value: forebrain

value: Forebrain from 68 embryonic 12.5 day mice

value: ENCBS617DPG at ENCODE; https://www.encodeproject.org/ENCBS617DPG/


title: total RNA-seq from forebrain (ENCLB204IPP)

description:
https://www.encodeproject.org/experiments/ENCSR647QBV/
***************
biological replicate number: 1
technical replicate number: 1
description: e12.5 forebrain
experiment encode accession: ENCSR647QBV
assay title: total RNA-seq
assembly: mm10
encode release date: 2016-05-03
lab: Barbara Wold, Caltech
library encode accession: ENCLB204IPP
size range: >200
spikeins used: /references/ENCSR884LPM/
nucleic acid starting quantity: 10.0
nucleic acid starting quantity units: ng

value: Forebrain from 120 embryonic 12.5 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS974GPH at ENCODE; https://www.encodeproject.org/ENCBS974GPH/


title: total RNA-seq from liver (ENCLB878ALV)

description:
https://www.encodeproject.org/experiments/ENCSR648YEP/
***************
biological replicate number: 1
technical replicate number: 1
description: e12.5 liver
experiment encode accession: ENCSR648YEP
assay title: total RNA-seq
assembly: mm10
encode release date: 2016-05-03
lab: Barbara Wold, Caltech
library encode accession: ENCLB878ALV
size range: >200
spikeins used: /references/ENCSR884LPM/
nucleic acid starting quantity: 10.0
nucleic acid starting quantity units: ng

value: tissue

value: Liver from 120 embryonic 12.5 day mice

value: ENCBS236ISK at ENCODE; https://www.encodeproject.org/ENCBS236ISK/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from midbrain (ENCLB426MFA)

description:
https://www.encodeproject.org/experiments/ENCSR347BFO/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR347BFO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR748XBE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB426MFA
size range: 300-500

value: midbrain

value: Midbrain from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS381PEJ at ENCODE; https://www.encodeproject.org/ENCBS381PEJ/


title: ChIP-seq from intestine (ENCLB366WOS)

description:
https://www.encodeproject.org/experiments/ENCSR642VYW/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27ac ChIP-seq on postnatal 0 day mouse intestine
experiment encode accession: ENCSR642VYW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR898PML
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB366WOS
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap intestine tissue mixed sex postnatal (0 days)

value: intestine

value: Intestine from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: healthy

value: ENCBS560AAA at ENCODE; https://www.encodeproject.org/ENCBS560AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: WGBS from heart (ENCLB764OQJ)

description:
https://www.encodeproject.org/experiments/ENCSR641SDF/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR641SDF
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB764OQJ
size range: 180-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex embryo (14.5 days)

extract_protocol:
general protocol: https://www.encodeproject.org/documents/665c8f16-3724-4ab7-aa29-688f396bcd4f/@@download/attachment/Ecker_Protocol_Summary.png
general protocol: https://www.encodeproject.org/documents/862389c9-38b6-4e76-8b84-d82fb9a4c6cf/@@download/attachment/Ecker_Replication_Summary.png
extraction method: Qiagen DNeasy Blood and Tissue Kit
general protocol: https://www.encodeproject.org/documents/9d5f346e-88d3-45e2-b28a-2b26f537490f/@@download/attachment/Ecker_Methyl_protocol_v030114.pdf

value: heart

value: Heart from pooled embryonic 14.5 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS566AAA at ENCODE; https://www.encodeproject.org/ENCBS566AAA/


title: ChIP-seq from stomach (ENCLB839QCP)

description:
https://www.encodeproject.org/experiments/ENCSR346FJG/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on postnatal 0 day mouse stomach
experiment encode accession: ENCSR346FJG
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR050VUZ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB839QCP
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap stomach tissue mixed sex postnatal (0 days)

value: stomach

value: tissue

value: Stomach from pooled postnatal 0 day mice

value: ENCBS561AAA at ENCODE; https://www.encodeproject.org/ENCBS561AAA/


title: ChIP-seq from stomach (ENCLB980SKI)

description:
https://www.encodeproject.org/experiments/ENCSR346FJG/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on postnatal 0 day mouse stomach
experiment encode accession: ENCSR346FJG
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR050VUZ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB980SKI
size range: 300-500

value: Stomach from 15 postnatal 0 day mice

value: ENCBS045AAA at ENCODE; https://www.encodeproject.org/ENCBS045AAA/


title: WGBS from heart (ENCLB975LPC)

description:
https://www.encodeproject.org/experiments/ENCSR641SDF/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR641SDF
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB975LPC
size range: 180-500

value: embryonic

value: ENCBS563AAA at ENCODE; https://www.encodeproject.org/ENCBS563AAA/


title: WGBS from heart (ENCLB912LVF)

description:
https://www.encodeproject.org/experiments/ENCSR641SDF/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR641SDF
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB912LVF
size range: 180-500


title: WGBS from midbrain (ENCLB747KGL)

description:
https://www.encodeproject.org/experiments/ENCSR634OPL/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR634OPL
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB747KGL
size range: 180-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (12.5 days)

value: midbrain

value: Midbrain from 88 embryonic 12.5 day mice

value: ENCBS280TPA at ENCODE; https://www.encodeproject.org/ENCBS280TPA/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from midbrain (ENCLB621JAP)

description:
https://www.encodeproject.org/experiments/ENCSR634OPL/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR634OPL
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB621JAP
size range: 180-500

value: Midbrain from 120 embryonic 12.5 day mice

value: healthy

value: ENCBS309WCU at ENCODE; https://www.encodeproject.org/ENCBS309WCU/


title: WGBS from neural tube (ENCLB805UZJ)

description:
https://www.encodeproject.org/experiments/ENCSR651PAZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR651PAZ
assay title: WGBS
assembly: mm10
encode release date: 2015-08-18
lab: Joe Ecker, Salk
library encode accession: ENCLB805UZJ
size range: 180-500

value: neural tube

value: Neural tube from embryonic 13.5 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS956BQY at ENCODE; https://www.encodeproject.org/ENCBS956BQY/


title: WGBS from midbrain (ENCLB808HJJ)

description:
https://www.encodeproject.org/experiments/ENCSR634OPL/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR634OPL
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB808HJJ
size range: 180-500

value: tissue


title: WGBS from midbrain (ENCLB558RLQ)

description:
https://www.encodeproject.org/experiments/ENCSR634OPL/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse midbrain
experiment encode accession: ENCSR634OPL
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB558RLQ
size range: 180-500


title: WGBS from heart (ENCLB897GEO)

description:
https://www.encodeproject.org/experiments/ENCSR633CON/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR633CON
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB897GEO
size range: 180-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (11.5 days)

value: heart

value: Heart from 109 embyronic 11.5 day mice

value: ENCBS225RIF at ENCODE; https://www.encodeproject.org/ENCBS225RIF/


title: WGBS from heart (ENCLB121BAI)

description:
https://www.encodeproject.org/experiments/ENCSR633CON/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR633CON
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB121BAI
size range: 180-500

value: Heart from embryonic 11.5 day mice

value: embryonic

value: ENCBS046IMM at ENCODE; https://www.encodeproject.org/ENCBS046IMM/


title: WGBS from heart (ENCLB509EVL)

description:
https://www.encodeproject.org/experiments/ENCSR633CON/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR633CON
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB509EVL
size range: 180-500


title: ChIP-seq from hindbrain (ENCLB934HPA)

description:
https://www.encodeproject.org/experiments/ENCSR344HHI/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR344HHI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR545RUT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB934HPA
size range: 300-500

value: hindbrain

value: Hindbrain from embryonic 13.5 day mice

value: ENCBS052EWC at ENCODE; https://www.encodeproject.org/ENCBS052EWC/


title: ChIP-seq from heart (ENCLB053ZXB)

description:
https://www.encodeproject.org/experiments/ENCSR345RKE/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR345RKE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR840PFW
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB053ZXB
size range: 300-500

value: Heart from pooled embryonic 14.5 day mice

value: healthy

value: ENCBS566AAA at ENCODE; https://www.encodeproject.org/ENCBS566AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from hindbrain (ENCLB922KSY)

description:
https://www.encodeproject.org/experiments/ENCSR344HHI/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR344HHI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR545RUT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB922KSY
size range: 300-500

value: pooled male and female

value: ENCBS296PIR at ENCODE; https://www.encodeproject.org/ENCBS296PIR/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB859ZHW)

description:
https://www.encodeproject.org/experiments/ENCSR631KAJ/
***************
biological replicate number: 2
technical replicate number: 1,2,3
description: H3K36me3 ChIP-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR631KAJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR317ENO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB859ZHW
size range: 300-500

value: tissue

value: Len Pennacchio, LBNL


title: WGBS from heart (ENCLB654DKC)

description:
https://www.encodeproject.org/experiments/ENCSR633CON/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR633CON
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB654DKC
size range: 180-500

value: heart


title: ChIP-seq from liver (ENCLB443QLY)

description:
https://www.encodeproject.org/experiments/ENCSR344BPJ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse liver
experiment encode accession: ENCSR344BPJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742WLX
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB443QLY
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap liver tissue mixed sex embryo (14.5 days)

value: liver

value: Liver from embryonic 14.5 day mice

value: ENCBS096GAJ at ENCODE; https://www.encodeproject.org/ENCBS096GAJ/


title: ChIP-seq from heart (ENCLB704ZSG)

description:
https://www.encodeproject.org/experiments/ENCSR631KAJ/
***************
biological replicate number: 1
technical replicate number: 1,2,3
description: H3K36me3 ChIP-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR631KAJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR317ENO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB704ZSG
size range: 300-500

value: Heart from 109 embyronic 11.5 day mice

value: embryonic

value: ENCBS225RIF at ENCODE; https://www.encodeproject.org/ENCBS225RIF/


title: ChIP-seq from stomach (ENCLB230VRL)

description:
https://www.encodeproject.org/experiments/ENCSR630AOU/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 16.5 day mouse stomach
experiment encode accession: ENCSR630AOU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR012BVY
encode release date: 2016-02-17
lab: Bing Ren, UCSD
library encode accession: ENCLB230VRL
size range: 300-500

source_name: Mus musculus strain B6NCrl stomach tissue mixed sex embryo (16.5 days)

value: stomach

value: Stomach from 41 embyonic 16.5 day mice

value: ENCBS793TEW at ENCODE; https://www.encodeproject.org/ENCBS793TEW/


title: ChIP-seq from liver (ENCLB946XTI)

description:
https://www.encodeproject.org/experiments/ENCSR344BPJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse liver
experiment encode accession: ENCSR344BPJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742WLX
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB946XTI
size range: 300-500

value: healthy

value: ENCBS194VTP at ENCODE; https://www.encodeproject.org/ENCBS194VTP/


title: WGBS from embryonic facial prominence (ENCLB868FLH)

description:
https://www.encodeproject.org/experiments/ENCSR628KWF/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR628KWF
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB868FLH
size range: 180-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (12.5 days)

value: embryonic facial prominence

value: Embryonic facial prominence from 120 embryonic 12.5 day mice

value: pooled male and female

value: ENCBS047UII at ENCODE; https://www.encodeproject.org/ENCBS047UII/


title: ChIP-seq from stomach (ENCLB919CUO)

description:
https://www.encodeproject.org/experiments/ENCSR630AOU/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 16.5 day mouse stomach
experiment encode accession: ENCSR630AOU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR012BVY
encode release date: 2016-02-17
lab: Bing Ren, UCSD
library encode accession: ENCLB919CUO
size range: 300-500

value: tissue

value: Stomach pooled from embyonic 16.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS243DCE at ENCODE; https://www.encodeproject.org/ENCBS243DCE/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from heart (ENCLB334PKC)

description:
https://www.encodeproject.org/experiments/ENCSR641SDF/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR641SDF
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB334PKC
size range: 180-500

value: heart

value: Heart from pooled embryonic 14.5 day mice

value: ENCBS563AAA at ENCODE; https://www.encodeproject.org/ENCBS563AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: WGBS from embryonic facial prominence (ENCLB254KSP)

description:
https://www.encodeproject.org/experiments/ENCSR628KWF/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR628KWF
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB254KSP
size range: 180-500

value: embryonic


title: ChIP-seq from lung (ENCLB716ORG)

description:
https://www.encodeproject.org/experiments/ENCSR340VNK/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on postnatal 0 day mouse lung
experiment encode accession: ENCSR340VNK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR241RIG
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB716ORG
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap lung tissue mixed sex postnatal (0 days)

value: lung

value: Lung from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS558AAA at ENCODE; https://www.encodeproject.org/ENCBS558AAA/


title: WGBS from embryonic facial prominence (ENCLB674EUF)

description:
https://www.encodeproject.org/experiments/ENCSR628KWF/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR628KWF
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB674EUF
size range: 180-500

value: embryonic facial prominence

value: Embryonic facial prominence from 88 embryonic 12.5 day mice

value: pooled male and female

value: healthy

value: ENCBS399GYO at ENCODE; https://www.encodeproject.org/ENCBS399GYO/


title: ChIP-seq from midbrain (ENCLB769JCL)

description:
https://www.encodeproject.org/experiments/ENCSR340ROY/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on postnatal 0 day mouse midbrain
experiment encode accession: ENCSR340ROY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR889XXJ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB769JCL
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue mixed sex postnatal (0 days)

value: midbrain

value: tissue

value: Midbrain from 15 postnatal 0 day mice

value: Len Pennacchio, LBNL

value: ENCBS039AAA at ENCODE; https://www.encodeproject.org/ENCBS039AAA/


title: ChIP-seq from liver (ENCLB982UMW)

description:
https://www.encodeproject.org/experiments/ENCSR617RDY/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse liver
experiment encode accession: ENCSR617RDY
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB982UMW
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap liver tissue mixed sex postnatal (0 days)

value: Control

value: liver

value: Liver from 15 postnatal 0 day mice

value: ENCBS043AAA at ENCODE; https://www.encodeproject.org/ENCBS043AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from midbrain (ENCLB297XHJ)

description:
https://www.encodeproject.org/experiments/ENCSR340ROY/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on postnatal 0 day mouse midbrain
experiment encode accession: ENCSR340ROY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR889XXJ
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB297XHJ
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

value: Midbrain from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS555AAA at ENCODE; https://www.encodeproject.org/ENCBS555AAA/


title: ChIP-seq from hindbrain (ENCLB849VGI)

description:
https://www.encodeproject.org/experiments/ENCSR617VBE/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on postnatal 0 day mouse hindbrain
experiment encode accession: ENCSR617VBE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR066SPF
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB849VGI
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex postnatal (0 days)

value: hindbrain

value: Hindbrain from 15 postnatal 0 day mice

value: pooled male and female

value: ENCBS040AAA at ENCODE; https://www.encodeproject.org/ENCBS040AAA/


title: ChIP-seq from heart (ENCLB831AWT)

description:
https://www.encodeproject.org/experiments/ENCSR339LMJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse heart
experiment encode accession: ENCSR339LMJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR424WHM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB831AWT
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (15.5 days)

value: heart

value: tissue

value: Heart from 78 embryonic 15.5 day mice

value: embryonic

value: healthy

value: ENCBS595EMK at ENCODE; https://www.encodeproject.org/ENCBS595EMK/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from liver (ENCLB738FZE)

description:
https://www.encodeproject.org/experiments/ENCSR617RDY/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse liver
experiment encode accession: ENCSR617RDY
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB738FZE
size range: 300-500

value: Control

value: liver

value: Liver from pooled postnatal 0 day mice

value: Len Pennacchio, LBNL

value: ENCBS559AAA at ENCODE; https://www.encodeproject.org/ENCBS559AAA/


title: WGBS from neural tube (ENCLB306CVI)

description:
https://www.encodeproject.org/experiments/ENCSR613BMI/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 11.5 day mouse neural tube
experiment encode accession: ENCSR613BMI
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB306CVI
size range: 180-500

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (11.5 days)

value: neural tube

value: Neural tube from 88 embyronic 11.5 day mice

value: ENCBS183YVD at ENCODE; https://www.encodeproject.org/ENCBS183YVD/


title: WGBS from neural tube (ENCLB192FUT)

description:
https://www.encodeproject.org/experiments/ENCSR613BMI/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 11.5 day mouse neural tube
experiment encode accession: ENCSR613BMI
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB192FUT
size range: 180-500

value: Neural tube from 109 embyronic 11.5 day mice

value: pooled male and female

value: ENCBS402TUS at ENCODE; https://www.encodeproject.org/ENCBS402TUS/


title: ChIP-seq from heart (ENCLB162HPO)

description:
https://www.encodeproject.org/experiments/ENCSR339LMJ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse heart
experiment encode accession: ENCSR339LMJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR424WHM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB162HPO
size range: 300-500

value: heart

value: tissue

value: Heart from 62 embryonic 15.5 day mice

value: ENCBS909LOF at ENCODE; https://www.encodeproject.org/ENCBS909LOF/


title: ChIP-seq from liver (ENCLB213BLD)

description:
https://www.encodeproject.org/experiments/ENCSR616TJM/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on postnatal 0 day mouse liver
experiment encode accession: ENCSR616TJM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR617RDY
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB213BLD
size range: 300-500

value: 0 day

value: postnatal

value: healthy

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: WGBS from neural tube (ENCLB619WPT)

description:
https://www.encodeproject.org/experiments/ENCSR613BMI/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 11.5 day mouse neural tube
experiment encode accession: ENCSR613BMI
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB619WPT
size range: 180-500

value: embryonic

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from liver (ENCLB567AMP)

description:
https://www.encodeproject.org/experiments/ENCSR616TJM/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on postnatal 0 day mouse liver
experiment encode accession: ENCSR616TJM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR617RDY
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB567AMP
size range: 300-500

value: liver

value: Liver from 15 postnatal 0 day mice

value: Len Pennacchio, LBNL

value: ENCBS043AAA at ENCODE; https://www.encodeproject.org/ENCBS043AAA/


title: ChIP-seq from liver (ENCLB714EQQ)

description:
https://www.encodeproject.org/experiments/ENCSR337XUK/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse liver
experiment encode accession: ENCSR337XUK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742WLX
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB714EQQ
size range: 300-500

value: Liver from embryonic 14.5 day mice

value: ENCBS096GAJ at ENCODE; https://www.encodeproject.org/ENCBS096GAJ/


title: WGBS from hindbrain (ENCLB286GXG)

description:
https://www.encodeproject.org/experiments/ENCSR609ZCD/
***************
biological replicate number: 2
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse hindbrain
experiment encode accession: ENCSR609ZCD
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB286GXG
size range: 180-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (12.5 days)

value: hindbrain

value: Hindbrain from 88 embryonic 12.5 day mice

value: pooled male and female

value: ENCBS022IBY at ENCODE; https://www.encodeproject.org/ENCBS022IBY/


title: ChIP-seq from liver (ENCLB466IQY)

description:
https://www.encodeproject.org/experiments/ENCSR337XUK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse liver
experiment encode accession: ENCSR337XUK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742WLX
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB466IQY
size range: 300-500

value: tissue

value: ENCBS194VTP at ENCODE; https://www.encodeproject.org/ENCBS194VTP/


title: WGBS from neural tube (ENCLB767OUR)

description:
https://www.encodeproject.org/experiments/ENCSR613BMI/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 11.5 day mouse neural tube
experiment encode accession: ENCSR613BMI
assay title: WGBS
assembly: mm10
encode release date: 2014-06-30
lab: Joe Ecker, Salk
library encode accession: ENCLB767OUR
size range: 180-500

value: neural tube

value: Neural tube from 109 embyronic 11.5 day mice

value: ENCBS402TUS at ENCODE; https://www.encodeproject.org/ENCBS402TUS/


title: WGBS from hindbrain (ENCLB534EYL)

description:
https://www.encodeproject.org/experiments/ENCSR609ZCD/
***************
biological replicate number: 1
technical replicate number: 2
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse hindbrain
experiment encode accession: ENCSR609ZCD
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB534EYL
size range: 180-500

value: Hindbrain from 120 embryonic 12.5 day mice

value: embryonic

value: healthy

value: ENCBS406RIE at ENCODE; https://www.encodeproject.org/ENCBS406RIE/


title: WGBS from hindbrain (ENCLB096TIR)

description:
https://www.encodeproject.org/experiments/ENCSR609ZCD/
***************
biological replicate number: 1
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse hindbrain
experiment encode accession: ENCSR609ZCD
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB096TIR
size range: 180-500

value: Len Pennacchio, LBNL

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: WGBS from embryonic facial prominence (ENCLB111BVD)

description:
https://www.encodeproject.org/experiments/ENCSR628KWF/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR628KWF
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB111BVD
size range: 180-500

value: embryonic facial prominence

value: Embryonic facial prominence from 88 embryonic 12.5 day mice

value: ENCBS399GYO at ENCODE; https://www.encodeproject.org/ENCBS399GYO/


title: ChIP-seq from hindbrain (ENCLB768SHC)

description:
https://www.encodeproject.org/experiments/ENCSR335TVR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 15.5 day mouse hindbrain
experiment encode accession: ENCSR335TVR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685UUM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB768SHC
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (15.5 days)

value: hindbrain

value: Hindbrain from 78 embryonic 15.5 day mice

value: ENCBS958AHU at ENCODE; https://www.encodeproject.org/ENCBS958AHU/


title: WGBS from hindbrain (ENCLB993NQJ)

description:
https://www.encodeproject.org/experiments/ENCSR609ZCD/
***************
biological replicate number: 2
technical replicate number: 1
description: Whole genome bisulfite-seq on embryonic 12.5 day mouse hindbrain
experiment encode accession: ENCSR609ZCD
assay title: WGBS
assembly: mm10
encode release date: 2016-03-14
lab: Joe Ecker, Salk
library encode accession: ENCLB993NQJ
size range: 180-500

value: tissue

value: Hindbrain from 88 embryonic 12.5 day mice

value: pooled male and female

value: ENCBS022IBY at ENCODE; https://www.encodeproject.org/ENCBS022IBY/


title: ChIP-seq from hindbrain (ENCLB546APY)

description:
https://www.encodeproject.org/experiments/ENCSR335TVR/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 15.5 day mouse hindbrain
experiment encode accession: ENCSR335TVR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685UUM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB546APY
size range: 300-500

value: Hindbrain from 62 embryonic 15.5 day mice

value: ENCBS948UKU at ENCODE; https://www.encodeproject.org/ENCBS948UKU/


title: ChIP-seq from kidney (ENCLB281ARB)

description:
https://www.encodeproject.org/experiments/ENCSR607QZE/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 16.5 day mouse kidney
experiment encode accession: ENCSR607QZE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR642DUV
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB281ARB
size range: 300-500

source_name: Mus musculus strain B6NCrl kidney tissue mixed sex embryo (16.5 days)

value: kidney

value: Kidney from 41 embyonic 16.5 day mice

value: embryonic

value: ENCBS529OHA at ENCODE; https://www.encodeproject.org/ENCBS529OHA/


title: ChIP-seq from embryonic facial prominence (ENCLB367GKW)

description:
https://www.encodeproject.org/experiments/ENCSR604DCI/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 14.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR604DCI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR329ZEN
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB367GKW
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap embryonic facial prominence tissue mixed sex embryo (14.5 days)

value: Craniofacial prominence from 34 embryonic 14.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS024AAA at ENCODE; https://www.encodeproject.org/ENCBS024AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from stomach (ENCLB736VEI)

description:
https://www.encodeproject.org/experiments/ENCSR599PKR/
***************
biological replicate number: 2
technical replicate number: 3,2,1
description: H3K36me3 ChIP-seq on embryonic 15.5 day mouse stomach
experiment encode accession: ENCSR599PKR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR240XQT
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB736VEI
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

source_name: Mus musculus strain B6NCrl stomach tissue mixed sex embryo (15.5 days)

value: stomach

value: Stomach from 62 embryonic 15.5 day mice

value: ENCBS355TAQ at ENCODE; https://www.encodeproject.org/ENCBS355TAQ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from kidney (ENCLB465TAL)

description:
https://www.encodeproject.org/experiments/ENCSR607QZE/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 16.5 day mouse kidney
experiment encode accession: ENCSR607QZE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR642DUV
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB465TAL
size range: 300-500
instrument models: Illumina HiSeq 2500,Illumina HiSeq 2000

value: tissue

value: Kidney pooled from embyonic 16.5 day mice

value: pooled male and female

value: ENCBS519MUD at ENCODE; https://www.encodeproject.org/ENCBS519MUD/


title: ChIP-seq from heart (ENCLB178XBA)

description:
https://www.encodeproject.org/experiments/ENCSR334IOH/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse heart
experiment encode accession: ENCSR334IOH
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB178XBA
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex postnatal (0 days)

value: Control

value: heart

value: Heart from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS041AAA at ENCODE; https://www.encodeproject.org/ENCBS041AAA/


title: ChIP-seq from heart (ENCLB924HOR)

description:
https://www.encodeproject.org/experiments/ENCSR592GQI/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR592GQI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR317ENO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB924HOR
size range: 300-500

value: Heart from embryonic 11.5 day mice

value: embryonic

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS046IMM at ENCODE; https://www.encodeproject.org/ENCBS046IMM/


title: microRNA-seq from stomach (ENCLB803HIM)

description:
https://www.encodeproject.org/experiments/ENCSR335LKF/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on embryonic 16.5 day mouse stomach
experiment encode accession: ENCSR335LKF
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB803HIM
size range: <30

value: stomach

value: Stomach pooled from embyonic 16.5 day mice

value: ENCBS243DCE at ENCODE; https://www.encodeproject.org/ENCBS243DCE/


title: microRNA-seq from stomach (ENCLB428LXD)

description:
https://www.encodeproject.org/experiments/ENCSR335LKF/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 16.5 day mouse stomach
experiment encode accession: ENCSR335LKF
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB428LXD
size range: <30

value: tissue

value: Stomach from 41 embyonic 16.5 day mice

value: ENCBS793TEW at ENCODE; https://www.encodeproject.org/ENCBS793TEW/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB086PLJ)

description:
https://www.encodeproject.org/experiments/ENCSR592GQI/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR592GQI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR317ENO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB086PLJ
size range: 300-500

value: heart

value: Heart from 109 embyronic 11.5 day mice

value: pooled male and female

value: ENCBS225RIF at ENCODE; https://www.encodeproject.org/ENCBS225RIF/