title: SEQC_LIF_PSU_A_4_L03_GCGGTAAGGC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_4_L04_GCGGTAAGGC_FC2_23302023_20120308

status: Public on Aug 08 2014

type: SRA

city: Shanghai

first: Leming

last: Shi

address: 2005 Songhu Road

department: School of Life Sciences

country: China

institute: Fudan University

library_source: transcriptomic

data_processing:
Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.
Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS
Genome_build: hg19
Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site

molecule: total RNA

organism: Homo sapiens

source_name: Universal Human Reference RNA (UHRR) from Stratagene

extract_protocol: Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively.

tag: seqc sample

value: A

tag: platform

value: AB 5500 Genetic Analyzer

tag: site

value: PSU

tag: library id

tag: lane

tag: barcode

value: GCGGTAAGGC

tag: flowcell


title: SEQC_ILM_CNL_A_2_L05_ACAGTG_BD0FG1ACXX

value: Illumina HiSeq 2000

value: CNL

value: ACAGTG


title: SEQC_LIF_PSU_A_5_L01_GTGCGGTTCC_FC1_23302023_20120308

value: GTGCGGTTCC


title: SEQC_ILM_CNL_A_2_L05_ACAGTG_AD0FD7ACXX


title: SEQC_LIF_PSU_A_4_L03_GCGGTAAGGC_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_2_L04_ACAGTG_BD0FG1ACXX


title: SEQC_ILM_MAY_F_1_L02_GTGAAA_BD0E99ACXX

description: 92 poly-A tailed RNA sequences

molecule: polyA RNA

organism: synthetic construct

source_name: Ambion ERCC Spike-In Control Mix 2

value: F

value: MAY

value: GTGAAA


title: SEQC_LIF_PSU_A_4_L02_GCGGTAAGGC_FC1_23302023_20120308


title: SEQC_ILM_MAY_F_1_L02_GTGAAA_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_4_L01_GCGGTAAGGC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_4_L01_GCGGTAAGGC_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_2_L04_ACAGTG_AD0FD7ACXX


title: SEQC_ILM_MAY_F_1_L01_GTGAAA_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_3_L06_AGGTTGCGAC_FC2_23302023_20120308

value: AGGTTGCGAC


title: SEQC_LIF_PSU_A_3_L05_AGGTTGCGAC_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_2_L03_ACAGTG_BD0FG1ACXX


title: SEQC_ILM_CNL_A_2_L03_ACAGTG_AD0FD7ACXX


title: SEQC_ILM_MAY_E_2_L08_GTGGCC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences

source_name: Ambion ERCC Spike-In Control Mix 1

value: E

value: GTGGCC


title: SEQC_LIF_PSU_A_3_L05_AGGTTGCGAC_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_3_L06_AGGTTGCGAC_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_3_L04_AGGTTGCGAC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_3_L04_AGGTTGCGAC_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_3_L03_AGGTTGCGAC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_3_L03_AGGTTGCGAC_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_2_L02_ACAGTG_AD0FD7ACXX


title: SEQC_ILM_CNL_A_2_L02_ACAGTG_BD0FG1ACXX


title: SEQC_ILM_MAY_E_2_L07_GTGGCC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_3_L02_AGGTTGCGAC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_4_L02_GCGGTAAGGC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_3_L02_AGGTTGCGAC_FC1_23302023_20120308


title: SEQC_LIF_PSU_D_4_L03_GGGAGACGTT_FC2_23302023_20120308

source_name: Mix of Sample A (UHRR) and Sample B (HBRR) (1:3)

value: D

value: GGGAGACGTT


title: SEQC_ILM_MAY_E_2_L07_GTGGCC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_2_L01_ACAGTG_BD0FG1ACXX


title: SEQC_LIF_PSU_A_3_L01_AGGTTGCGAC_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_3_L01_AGGTTGCGAC_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_2_L06_GTGGTGTAAG_FC2_23302023_20120308

value: GTGGTGTAAG


title: SEQC_ILM_MAY_F_1_L01_GTGAAA_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_E_2_L06_GTGGCC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_2_L06_GTGGTGTAAG_FC1_23302023_20120308

value: A


title: SEQC_LIF_PSU_A_2_L05_GTGGTGTAAG_FC2_23302023_20120308

value: AB 5500 Genetic Analyzer


title: SEQC_LIF_PSU_A_2_L05_GTGGTGTAAG_FC1_23302023_20120308

value: PSU


title: SEQC_ILM_MAY_E_2_L05_GTGGCC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_2_L04_GTGGTGTAAG_FC2_23302023_20120308


title: SEQC_ILM_MAY_E_2_L08_GTGGCC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_2_L04_GTGGTGTAAG_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_1_L07_ATCACG_BD0FG1ACXX

value: ATCACG


title: SEQC_ILM_CNL_A_1_L07_ATCACG_AD0FD7ACXX

value: Illumina HiSeq 2000


title: SEQC_LIF_PSU_A_2_L03_GTGGTGTAAG_FC1_23302023_20120308


title: SEQC_ILM_MAY_E_2_L05_GTGGCC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_1_L08_ATCACG_AD0FD7ACXX

value: CNL


title: SEQC_LIF_PSU_A_2_L02_GTGGTGTAAG_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_2_L03_GTGGTGTAAG_FC2_23302023_20120308


title: SEQC_ILM_CNL_A_1_L06_ATCACG_BD0FG1ACXX


title: SEQC_ILM_MAY_E_2_L04_GTGGCC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_E_2_L04_GTGGCC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_2_L02_GTGGTGTAAG_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_2_L01_GTGGTGTAAG_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_2_L01_GTGGTGTAAG_FC1_23302023_20120308


title: SEQC_ILM_MAY_E_2_L03_GTGGCC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_1_L05_ATCACG_BD0FG1ACXX


title: SEQC_ILM_MAY_E_2_L06_GTGGCC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_1_L06_GTGTAAGAGG_FC2_23302023_20120308

value: GTGTAAGAGG


title: SEQC_ILM_CNL_A_1_L05_ATCACG_AD0FD7ACXX


title: SEQC_LIF_PSU_A_1_L06_GTGTAAGAGG_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_2_L01_ACAGTG_AD0FD7ACXX

value: ACAGTG


title: SEQC_ILM_MAY_E_2_L03_GTGGCC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_1_L08_ATCACG_BD0FG1ACXX


title: SEQC_ILM_CNL_A_1_L04_ATCACG_BD0FG1ACXX


title: SEQC_LIF_PSU_A_1_L05_GTGTAAGAGG_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_1_L04_ATCACG_AD0FD7ACXX


title: SEQC_LIF_PSU_A_1_L04_GTGTAAGAGG_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_1_L04_GTGTAAGAGG_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_1_L05_GTGTAAGAGG_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_1_L03_GTGTAAGAGG_FC2_23302023_20120308


title: SEQC_ILM_MAY_E_2_L02_GTGGCC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_E_2_L02_GTGGCC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_PSU_A_1_L02_GTGTAAGAGG_FC2_23302023_20120308


title: SEQC_ILM_MAY_E_2_L01_GTGGCC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_E_2_L01_GTGGCC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_A_1_L03_ATCACG_AD0FD7ACXX


title: SEQC_LIF_PSU_A_1_L01_GTGTAAGAGG_FC2_23302023_20120308


title: SEQC_LIF_PSU_A_1_L02_GTGTAAGAGG_FC1_23302023_20120308


title: SEQC_LIF_PSU_A_1_L03_GTGTAAGAGG_FC1_23302023_20120308


title: SEQC_ILM_CNL_A_1_L02_ATCACG_BD0FG1ACXX


title: SEQC_ILM_CNL_A_1_L02_ATCACG_AD0FD7ACXX


title: SEQC_ILM_MAY_E_1_L08_GTCCGC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences

value: GTCCGC


title: SEQC_LIF_PSU_A_1_L01_GTGTAAGAGG_FC1_23302023_20120308


title: SEQC_LIF_NWU_D_5_L06_GGGTCGGTAT_FC1_NWU00001_20120220

value: NWU

value: GGGTCGGTAT


title: SEQC_LIF_NWU_D_5_L06_GGGTCGGTAT_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_A_1_L01_ATCACG_BD0FG1ACXX


title: SEQC_ILM_MAY_E_1_L08_GTCCGC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences

value: MAY


title: SEQC_LIF_NWU_D_5_L05_GGGTCGGTAT_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_A_1_L03_ATCACG_BD0FG1ACXX


title: SEQC_LIF_NWU_D_5_L05_GGGTCGGTAT_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_A_1_L01_ATCACG_AD0FD7ACXX


title: SEQC_LIF_NWU_D_5_L04_GGGTCGGTAT_FC1_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L07_GTCCGC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences

value: E


title: SEQC_LIF_NWU_D_5_L03_GGGTCGGTAT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_5_L04_GGGTCGGTAT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_5_L03_GGGTCGGTAT_FC1_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L06_GTCCGC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_5_L08_ATTCCT_BC0AYPACXX

value: BGI

value: ATTCCT


title: SEQC_LIF_NWU_D_5_L02_GGGTCGGTAT_FC2_NWU00001_20120220

value: D


title: SEQC_ILM_BGI_D_5_L08_ATTCCT_AC0AYTACXX


title: SEQC_LIF_NWU_D_5_L02_GGGTCGGTAT_FC1_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L06_GTCCGC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_4_L06_GGGAGACGTT_FC1_NWU00001_20120220

value: GGGAGACGTT


title: SEQC_LIF_NWU_D_5_L01_GGGTCGGTAT_FC2_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L05_GTCCGC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_5_L07_ATTCCT_AC0AYTACXX


title: SEQC_LIF_NWU_D_4_L06_GGGAGACGTT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_4_L05_GGGAGACGTT_FC2_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L07_GTCCGC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_E_1_L05_GTCCGC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_5_L06_ATTCCT_AC0AYTACXX


title: SEQC_ILM_BGI_D_5_L06_ATTCCT_BC0AYPACXX


title: SEQC_LIF_NWU_D_5_L01_GGGTCGGTAT_FC1_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L04_GTCCGC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_5_L05_ATTCCT_BC0AYPACXX


title: SEQC_LIF_NWU_D_4_L04_GGGAGACGTT_FC2_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L04_GTCCGC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_4_L03_GGGAGACGTT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_D_4_L03_GGGAGACGTT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_5_L05_ATTCCT_AC0AYTACXX


title: SEQC_LIF_NWU_D_4_L02_GGGAGACGTT_FC2_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L03_GTCCGC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_4_L02_GGGAGACGTT_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_5_L07_ATTCCT_BC0AYPACXX


title: SEQC_LIF_NWU_D_4_L01_GGGAGACGTT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_D_3_L06_AAGAGGAAAA_FC2_NWU00001_20120220

value: AAGAGGAAAA


title: SEQC_LIF_NWU_D_4_L05_GGGAGACGTT_FC1_NWU00001_20120220

value: AB 5500 Genetic Analyzer


title: SEQC_ILM_MAY_E_1_L03_GTCCGC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_MAY_E_1_L02_GTCCGC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_5_L04_ATTCCT_BC0AYPACXX


title: SEQC_LIF_NWU_D_3_L06_AAGAGGAAAA_FC1_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L02_GTCCGC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_3_L05_AAGAGGAAAA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_D_3_L05_AAGAGGAAAA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_4_L01_GGGAGACGTT_FC2_NWU00001_20120220


title: SEQC_ILM_MAY_E_1_L01_GTCCGC_BD0E99ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_5_L04_ATTCCT_AC0AYTACXX


title: SEQC_LIF_NWU_D_3_L04_AAGAGGAAAA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_5_L03_ATTCCT_BC0AYPACXX


title: SEQC_ILM_MAY_E_1_L01_GTCCGC_AD0E8UACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_5_L02_ATTCCT_BC0AYPACXX


title: SEQC_LIF_NWU_D_3_L03_AAGAGGAAAA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_5_L03_ATTCCT_AC0AYTACXX


title: SEQC_LIF_NWU_D_3_L02_AAGAGGAAAA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_5_L02_ATTCCT_AC0AYTACXX


title: SEQC_ILM_CNL_F_2_L08_GTTTCG_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences

value: F

value: GTTTCG


title: SEQC_LIF_NWU_D_3_L02_AAGAGGAAAA_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_2_L08_GTTTCG_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences

value: Illumina HiSeq 2000


title: SEQC_LIF_NWU_D_3_L01_AAGAGGAAAA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_3_L01_AAGAGGAAAA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_5_L01_ATTCCT_BC0AYPACXX


title: SEQC_ILM_CNL_F_2_L07_GTTTCG_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences

value: CNL


title: SEQC_LIF_NWU_D_2_L06_GAGCGAGGAT_FC1_NWU00001_20120220

value: GAGCGAGGAT


title: SEQC_LIF_NWU_D_2_L05_GAGCGAGGAT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_5_L01_ATTCCT_AC0AYTACXX


title: SEQC_LIF_NWU_D_2_L05_GAGCGAGGAT_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_2_L06_GTTTCG_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_4_L08_CCGTCC_AC0AYTACXX

value: CCGTCC


title: SEQC_ILM_CNL_F_2_L05_GTTTCG_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_2_L03_GAGCGAGGAT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_3_L03_AAGAGGAAAA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_2_L04_GAGCGAGGAT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_D_2_L03_GAGCGAGGAT_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_2_L05_GTTTCG_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_2_L02_GAGCGAGGAT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_2_L06_GAGCGAGGAT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_4_L06_CCGTCC_BC0AYPACXX


title: SEQC_ILM_CNL_F_2_L04_GTTTCG_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_2_L01_GAGCGAGGAT_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_2_L07_GTTTCG_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_F_2_L04_GTTTCG_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_1_L06_GGATGCGGTC_FC2_NWU00001_20120220

value: GGATGCGGTC


title: SEQC_LIF_NWU_D_1_L06_GGATGCGGTC_FC1_NWU00001_20120220

value: NWU


title: SEQC_ILM_BGI_D_4_L06_CCGTCC_AC0AYTACXX


title: SEQC_ILM_CNL_F_2_L03_GTTTCG_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_F_2_L03_GTTTCG_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_1_L05_GGATGCGGTC_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_1_L05_GGATGCGGTC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_D_1_L04_GGATGCGGTC_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_2_L04_GAGCGAGGAT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_1_L04_GGATGCGGTC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_4_L05_CCGTCC_AC0AYTACXX


title: SEQC_LIF_NWU_D_2_L01_GAGCGAGGAT_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_F_2_L02_GTTTCG_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_1_L03_GGATGCGGTC_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_2_L02_GAGCGAGGAT_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_4_L07_CCGTCC_BC0AYPACXX


title: SEQC_ILM_BGI_D_4_L07_CCGTCC_AC0AYTACXX


title: SEQC_ILM_BGI_D_4_L05_CCGTCC_BC0AYPACXX


title: SEQC_ILM_BGI_D_4_L04_CCGTCC_BC0AYPACXX


title: SEQC_LIF_NWU_D_3_L04_AAGAGGAAAA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_D_1_L03_GGATGCGGTC_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_2_L02_GTTTCG_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_4_L04_CCGTCC_AC0AYTACXX


title: SEQC_LIF_NWU_D_1_L02_GGATGCGGTC_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_D_1_L02_GGATGCGGTC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_D_1_L01_GGATGCGGTC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_4_L03_CCGTCC_BC0AYPACXX


title: SEQC_ILM_CNL_F_2_L01_GTTTCG_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_D_1_L01_GGATGCGGTC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_5_L06_GCGGTGCTTG_FC2_NWU00001_20120220

source_name: Mix of Sample A (UHRR) and Sample B (HBRR) (3:1)

value: C

value: GCGGTGCTTG


title: SEQC_ILM_BGI_D_4_L08_CCGTCC_BC0AYPACXX


title: SEQC_ILM_BGI_D_4_L03_CCGTCC_AC0AYTACXX


title: SEQC_LIF_NWU_C_5_L05_GCGGTGCTTG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_5_L06_GCGGTGCTTG_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_1_L08_GTGAAA_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences

value: GTGAAA


title: SEQC_ILM_BGI_D_4_L02_CCGTCC_BC0AYPACXX

value: BGI


title: SEQC_LIF_NWU_C_5_L05_GCGGTGCTTG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_D_4_L04_GGGAGACGTT_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_4_L02_CCGTCC_AC0AYTACXX


title: SEQC_LIF_NWU_C_5_L04_GCGGTGCTTG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_5_L03_GCGGTGCTTG_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_F_1_L07_GTGAAA_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_5_L02_GCGGTGCTTG_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_F_1_L07_GTGAAA_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_5_L03_GCGGTGCTTG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_5_L02_GCGGTGCTTG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_5_L04_GCGGTGCTTG_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_2_L01_GTTTCG_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_4_L01_CCGTCC_BC0AYPACXX


title: SEQC_ILM_BGI_D_4_L01_CCGTCC_AC0AYTACXX


title: SEQC_ILM_CNL_F_1_L06_GTGAAA_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_5_L01_GCGGTGCTTG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_3_L08_CTTGTA_BC0AYPACXX

value: CTTGTA


title: SEQC_LIF_NWU_C_5_L01_GCGGTGCTTG_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_1_L05_GTGAAA_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_4_L06_GAGTTGAATG_FC2_NWU00001_20120220

value: GAGTTGAATG


title: SEQC_LIF_NWU_C_4_L05_GAGTTGAATG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_4_L06_GAGTTGAATG_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_1_L08_GTGAAA_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_3_L07_CTTGTA_BC0AYPACXX

value: D


title: SEQC_ILM_CNL_F_1_L05_GTGAAA_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_F_1_L04_GTGAAA_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_4_L05_GAGTTGAATG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_4_L04_GAGTTGAATG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_4_L04_GAGTTGAATG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_4_L03_GAGTTGAATG_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_F_1_L04_GTGAAA_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_3_L06_CTTGTA_BC0AYPACXX


title: SEQC_ILM_BGI_D_3_L07_CTTGTA_AC0AYTACXX


title: SEQC_ILM_CNL_F_1_L03_GTGAAA_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_F_1_L03_GTGAAA_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_3_L06_CTTGTA_AC0AYTACXX


title: SEQC_LIF_NWU_C_4_L02_GAGTTGAATG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_4_L03_GAGTTGAATG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_4_L01_GAGTTGAATG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_4_L02_GAGTTGAATG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_4_L01_GAGTTGAATG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_3_L06_GTGCGACACG_FC2_NWU00001_20120220

value: GTGCGACACG


title: SEQC_LIF_NWU_C_3_L06_GTGCGACACG_FC1_NWU00001_20120220

value: AB 5500 Genetic Analyzer


title: SEQC_ILM_BGI_D_3_L05_CTTGTA_AC0AYTACXX


title: SEQC_LIF_NWU_C_3_L05_GTGCGACACG_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_F_1_L02_GTGAAA_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences

value: F


title: SEQC_ILM_BGI_D_3_L05_CTTGTA_BC0AYPACXX


title: SEQC_ILM_CNL_F_1_L01_GTGAAA_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_3_L08_CTTGTA_AC0AYTACXX


title: SEQC_LIF_NWU_C_3_L04_GTGCGACACG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_3_L04_CTTGTA_AC0AYTACXX


title: SEQC_LIF_NWU_C_3_L05_GTGCGACACG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_3_L04_GTGCGACACG_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_F_1_L01_GTGAAA_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_E_2_L08_GTGGCC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences

value: E

value: GTGGCC


title: SEQC_LIF_NWU_C_3_L02_GTGCGACACG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_3_L03_GTGCGACACG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_3_L03_GTGCGACACG_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_E_2_L08_GTGGCC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences

value: Illumina HiSeq 2000

value: CNL


title: SEQC_LIF_NWU_C_3_L01_GTGCGACACG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_3_L02_GTGCGACACG_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_E_2_L07_GTGGCC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_3_L02_CTTGTA_BC0AYPACXX


title: SEQC_ILM_BGI_D_3_L03_CTTGTA_AC0AYTACXX


title: SEQC_ILM_CNL_F_1_L02_GTGAAA_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_3_L02_CTTGTA_AC0AYTACXX


title: SEQC_LIF_NWU_C_2_L06_GGGTTATGCC_FC2_NWU00001_20120220

value: GGGTTATGCC


title: SEQC_ILM_BGI_D_3_L04_CTTGTA_BC0AYPACXX


title: SEQC_LIF_NWU_C_2_L06_GGGTTATGCC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_2_L05_GGGTTATGCC_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_E_2_L06_GTGGCC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_3_L01_CTTGTA_BC0AYPACXX


title: SEQC_LIF_NWU_C_2_L04_GGGTTATGCC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_3_L01_CTTGTA_AC0AYTACXX


title: SEQC_ILM_CNL_E_2_L05_GTGGCC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_2_L05_GGGTTATGCC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_2_L04_GGGTTATGCC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L08_ACTTGA_BC0AYPACXX

value: ACTTGA


title: SEQC_LIF_NWU_C_2_L03_GGGTTATGCC_FC2_NWU00001_20120220

value: NWU


title: SEQC_LIF_NWU_C_2_L03_GGGTTATGCC_FC1_NWU00001_20120220

value: C


title: SEQC_ILM_BGI_D_3_L03_CTTGTA_BC0AYPACXX


title: SEQC_ILM_CNL_E_2_L05_GTGGCC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_E_2_L04_GTGGCC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_2_L01_GGGTTATGCC_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_E_2_L07_GTGGCC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_2_L01_GGGTTATGCC_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_E_2_L04_GTGGCC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_E_2_L03_GTGGCC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_1_L06_ATAGGTTATA_FC2_NWU00001_20120220

value: ATAGGTTATA


title: SEQC_ILM_BGI_D_2_L07_ACTTGA_AC0AYTACXX


title: SEQC_LIF_NWU_C_1_L06_ATAGGTTATA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_1_L05_ATAGGTTATA_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_E_2_L03_GTGGCC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_2_L06_ACTTGA_BC0AYPACXX


title: SEQC_LIF_NWU_C_1_L05_ATAGGTTATA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L06_ACTTGA_AC0AYTACXX


title: SEQC_LIF_NWU_C_1_L04_ATAGGTTATA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_1_L04_ATAGGTTATA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L08_ACTTGA_AC0AYTACXX


title: SEQC_ILM_CNL_E_2_L01_GTGGCC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_E_2_L02_GTGGCC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_1_L02_ATAGGTTATA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_1_L02_ATAGGTTATA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L05_ACTTGA_BC0AYPACXX


title: SEQC_ILM_CNL_E_2_L02_GTGGCC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_C_1_L03_ATAGGTTATA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_1_L01_ATAGGTTATA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L05_ACTTGA_AC0AYTACXX


title: SEQC_LIF_NWU_C_1_L01_ATAGGTTATA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_2_L02_GGGTTATGCC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L04_ACTTGA_AC0AYTACXX


title: SEQC_LIF_NWU_B_5_L06_GAGAAGATGA_FC2_NWU00001_20120220

source_name: Human Brain Reference RNA (HBRR) from Ambion

value: B

value: GAGAAGATGA


title: SEQC_LIF_NWU_B_5_L06_GAGAAGATGA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_5_L05_GAGAAGATGA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L04_ACTTGA_BC0AYPACXX

value: BGI


title: SEQC_LIF_NWU_B_5_L05_GAGAAGATGA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L03_ACTTGA_BC0AYPACXX


title: SEQC_LIF_NWU_B_5_L04_GAGAAGATGA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_2_L02_GGGTTATGCC_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_E_1_L07_GTCCGC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences

value: GTCCGC


title: SEQC_ILM_BGI_D_2_L07_ACTTGA_BC0AYPACXX

value: D


title: SEQC_LIF_NWU_B_5_L04_GAGAAGATGA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_C_1_L03_ATAGGTTATA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_C_3_L01_GTGCGACACG_FC2_NWU00001_20120220

value: GTGCGACACG


title: SEQC_ILM_CNL_E_2_L01_GTGGCC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_E_1_L08_GTCCGC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_B_5_L03_GAGAAGATGA_FC2_NWU00001_20120220

value: AB 5500 Genetic Analyzer


title: SEQC_ILM_BGI_D_2_L02_ACTTGA_AC0AYTACXX


title: SEQC_ILM_CNL_E_1_L07_GTCCGC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_CNL_E_1_L08_GTCCGC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_B_5_L03_GAGAAGATGA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_5_L01_GAGAAGATGA_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_E_1_L06_GTCCGC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_B_5_L02_GAGAAGATGA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L03_ACTTGA_AC0AYTACXX


title: SEQC_LIF_NWU_B_4_L06_GTGCGGCAGA_FC2_NWU00001_20120220

value: GTGCGGCAGA


title: SEQC_ILM_CNL_E_1_L05_GTCCGC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences

value: E


title: SEQC_LIF_NWU_B_5_L02_GAGAAGATGA_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_E_1_L05_GTCCGC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_1_L08_TGACCA_BC0AYPACXX

value: TGACCA


title: SEQC_LIF_NWU_B_4_L05_GTGCGGCAGA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_4_L06_GTGCGGCAGA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_4_L05_GTGCGGCAGA_FC2_NWU00001_20120220


title: SEQC_ILM_CNL_E_1_L04_GTCCGC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences

value: Illumina HiSeq 2000


title: SEQC_ILM_BGI_D_1_L08_TGACCA_AC0AYTACXX


title: SEQC_LIF_NWU_B_4_L04_GTGCGGCAGA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_4_L04_GTGCGGCAGA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_5_L01_GAGAAGATGA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_2_L01_ACTTGA_AC0AYTACXX


title: SEQC_ILM_CNL_E_1_L04_GTCCGC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences

value: CNL


title: SEQC_LIF_NWU_B_4_L03_GTGCGGCAGA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_4_L03_GTGCGGCAGA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_1_L07_TGACCA_BC0AYPACXX


title: SEQC_ILM_BGI_D_2_L02_ACTTGA_BC0AYPACXX


title: SEQC_ILM_CNL_E_1_L03_GTCCGC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_B_4_L02_GTGCGGCAGA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_1_L07_TGACCA_AC0AYTACXX


title: SEQC_LIF_NWU_B_4_L02_GTGCGGCAGA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_1_L06_TGACCA_BC0AYPACXX


title: SEQC_ILM_CNL_E_1_L03_GTCCGC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_2_L01_ACTTGA_BC0AYPACXX


title: SEQC_LIF_NWU_B_4_L01_GTGCGGCAGA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_4_L01_GTGCGGCAGA_FC1_NWU00001_20120220


title: SEQC_ILM_CNL_E_1_L02_GTCCGC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_B_3_L06_GCGGTAAGCT_FC2_NWU00001_20120220

value: GCGGTAAGCT


title: SEQC_LIF_NWU_B_3_L06_GCGGTAAGCT_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_1_L06_TGACCA_AC0AYTACXX


title: SEQC_LIF_NWU_B_3_L05_GCGGTAAGCT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_1_L05_TGACCA_BC0AYPACXX


title: SEQC_ILM_CNL_E_1_L02_GTCCGC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_1_L04_TGACCA_BC0AYPACXX


title: SEQC_ILM_BGI_D_1_L05_TGACCA_AC0AYTACXX


title: SEQC_LIF_NWU_B_3_L04_GCGGTAAGCT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_3_L04_GCGGTAAGCT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_3_L03_GCGGTAAGCT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_3_L05_GCGGTAAGCT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_3_L02_GCGGTAAGCT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_D_1_L04_TGACCA_AC0AYTACXX


title: SEQC_LIF_NWU_B_3_L03_GCGGTAAGCT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_3_L02_GCGGTAAGCT_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_2_L08_GTTTCG_AC0AYTACXX

description: 92 poly-A tailed RNA sequences

value: F

value: GTTTCG


title: SEQC_LIF_NWU_B_3_L01_GCGGTAAGCT_FC2_NWU00001_20120220

value: NWU


title: SEQC_ILM_BGI_F_2_L08_GTTTCG_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_1_L03_TGACCA_BC0AYPACXX


title: SEQC_ILM_CNL_E_1_L01_GTCCGC_AD0FD7ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_F_2_L07_GTTTCG_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_1_L03_TGACCA_AC0AYTACXX


title: SEQC_LIF_NWU_B_3_L01_GCGGTAAGCT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_2_L06_GCGAGGGACA_FC1_NWU00001_20120220

value: GCGAGGGACA


title: SEQC_LIF_NWU_B_2_L06_GCGAGGGACA_FC2_NWU00001_20120220

value: B


title: SEQC_ILM_CNL_E_1_L01_GTCCGC_BD0FG1ACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_F_2_L07_GTTTCG_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_B_2_L04_GCGAGGGACA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_2_L06_GTTTCG_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_1_L02_TGACCA_BC0AYPACXX


title: SEQC_ILM_BGI_D_1_L02_TGACCA_AC0AYTACXX


title: SEQC_LIF_NWU_B_2_L04_GCGAGGGACA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_2_L05_GCGAGGGACA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_2_L05_GCGAGGGACA_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_2_L06_GTTTCG_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_F_2_L05_GTTTCG_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_B_2_L03_GCGAGGGACA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_D_1_L01_TGACCA_AC0AYTACXX


title: SEQC_LIF_NWU_B_2_L02_GCGAGGGACA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_2_L03_GCGAGGGACA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_2_L02_GCGAGGGACA_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_2_L05_GTTTCG_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_D_1_L01_TGACCA_BC0AYPACXX


title: SEQC_LIF_NWU_B_2_L01_GCGAGGGACA_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_2_L01_GCGAGGGACA_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_1_L06_AGGGAGTGGT_FC2_NWU00001_20120220

value: AGGGAGTGGT


title: SEQC_ILM_BGI_F_2_L04_GTTTCG_BC0AYPACXX

description: 92 poly-A tailed RNA sequences

value: BGI


title: SEQC_LIF_NWU_B_1_L06_AGGGAGTGGT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_1_L05_AGGGAGTGGT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_5_L08_ACTGAT_AC0AYTACXX

value: C

value: ACTGAT


title: SEQC_LIF_NWU_B_1_L05_AGGGAGTGGT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_1_L04_AGGGAGTGGT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_5_L07_ACTGAT_AC0AYTACXX


title: SEQC_ILM_BGI_F_2_L03_GTTTCG_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_5_L07_ACTGAT_BC0AYPACXX


title: SEQC_LIF_NWU_B_1_L03_AGGGAGTGGT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_5_L06_ACTGAT_BC0AYPACXX


title: SEQC_LIF_NWU_B_1_L04_AGGGAGTGGT_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_2_L02_GTTTCG_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_B_1_L02_AGGGAGTGGT_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_2_L03_GTTTCG_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_5_L08_ACTGAT_BC0AYPACXX


title: SEQC_ILM_BGI_F_2_L02_GTTTCG_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_5_L05_ACTGAT_BC0AYPACXX


title: SEQC_LIF_NWU_B_1_L01_AGGGAGTGGT_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_1_L01_AGGGAGTGGT_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_B_1_L03_AGGGAGTGGT_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_C_5_L05_ACTGAT_AC0AYTACXX


title: SEQC_ILM_BGI_F_2_L01_GTTTCG_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_5_L06_GTGCGGTTCC_FC1_NWU00001_20120220

value: A

value: GTGCGGTTCC


title: SEQC_ILM_BGI_C_5_L04_ACTGAT_BC0AYPACXX


title: SEQC_LIF_NWU_A_5_L05_GTGCGGTTCC_FC2_NWU00001_20120220

value: AB 5500 Genetic Analyzer


title: SEQC_LIF_NWU_A_5_L06_GTGCGGTTCC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_2_L04_GTTTCG_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_5_L05_GTGCGGTTCC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_C_5_L04_ACTGAT_AC0AYTACXX


title: SEQC_ILM_BGI_F_1_L08_GTGAAA_BC0AYPACXX

description: 92 poly-A tailed RNA sequences

value: GTGAAA


title: SEQC_LIF_NWU_A_5_L04_GTGCGGTTCC_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_A_5_L04_GTGCGGTTCC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L08_GTGAAA_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_5_L06_ACTGAT_AC0AYTACXX


title: SEQC_LIF_NWU_A_5_L03_GTGCGGTTCC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_5_L02_GTGCGGTTCC_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_B_1_L02_AGGGAGTGGT_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L07_GTGAAA_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_5_L03_ACTGAT_BC0AYPACXX


title: SEQC_ILM_BGI_C_5_L03_ACTGAT_AC0AYTACXX


title: SEQC_LIF_NWU_A_5_L03_GTGCGGTTCC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L07_GTGAAA_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_5_L01_GTGCGGTTCC_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_A_5_L01_GTGCGGTTCC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L06_GTGAAA_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_4_L06_GCGGTAAGGC_FC2_NWU00001_20120220

value: GCGGTAAGGC


title: SEQC_ILM_BGI_C_5_L02_ACTGAT_BC0AYPACXX

value: Illumina HiSeq 2000


title: SEQC_ILM_BGI_C_5_L01_ACTGAT_BC0AYPACXX


title: SEQC_LIF_NWU_A_4_L05_GCGGTAAGGC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L06_GTGAAA_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_4_L05_GCGGTAAGGC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_2_L01_GTTTCG_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_4_L04_GCGGTAAGGC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L05_GTGAAA_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_5_L02_GTGCGGTTCC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_C_5_L01_ACTGAT_AC0AYTACXX


title: SEQC_LIF_NWU_A_4_L04_GCGGTAAGGC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_4_L03_GCGGTAAGGC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_4_L08_ATGTCA_BC0AYPACXX

value: ATGTCA


title: SEQC_LIF_NWU_A_4_L03_GCGGTAAGGC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L05_GTGAAA_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_F_1_L04_GTGAAA_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_4_L02_GCGGTAAGGC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_4_L07_ATGTCA_BC0AYPACXX


title: SEQC_ILM_BGI_C_5_L02_ACTGAT_AC0AYTACXX


title: SEQC_LIF_NWU_A_4_L01_GCGGTAAGGC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_4_L02_GCGGTAAGGC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L04_GTGAAA_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_4_L07_ATGTCA_AC0AYTACXX


title: SEQC_LIF_NWU_A_3_L06_AGGTTGCGAC_FC2_NWU00001_20120220

value: AGGTTGCGAC


title: SEQC_LIF_NWU_A_4_L06_GCGGTAAGGC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_C_4_L06_ATGTCA_BC0AYPACXX


title: SEQC_ILM_BGI_F_1_L03_GTGAAA_AC0AYTACXX

description: 92 poly-A tailed RNA sequences

value: F


title: SEQC_ILM_BGI_F_1_L02_GTGAAA_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_3_L05_AGGTTGCGAC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_4_L06_ATGTCA_AC0AYTACXX


title: SEQC_LIF_NWU_A_3_L04_AGGTTGCGAC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_3_L03_AGGTTGCGAC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L02_GTGAAA_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_3_L03_AGGTTGCGAC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L01_GTGAAA_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_3_L02_AGGTTGCGAC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_4_L08_ATGTCA_AC0AYTACXX


title: SEQC_LIF_NWU_A_3_L02_AGGTTGCGAC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L03_GTGAAA_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_4_L01_GCGGTAAGGC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_F_1_L01_GTGAAA_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_3_L06_AGGTTGCGAC_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_3_L01_AGGTTGCGAC_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_A_2_L06_GTGGTGTAAG_FC2_NWU00001_20120220

value: GTGGTGTAAG


title: SEQC_LIF_NWU_A_2_L06_GTGGTGTAAG_FC1_NWU00001_20120220

value: NWU


title: SEQC_ILM_BGI_C_4_L04_ATGTCA_AC0AYTACXX


title: SEQC_ILM_BGI_C_4_L04_ATGTCA_BC0AYPACXX


title: SEQC_LIF_NWU_A_3_L05_AGGTTGCGAC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_E_2_L08_GTGGCC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences

value: E

value: GTGGCC


title: SEQC_LIF_NWU_A_2_L05_GTGGTGTAAG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_A_3_L01_AGGTTGCGAC_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_E_2_L08_GTGGCC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_3_L04_AGGTTGCGAC_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_4_L03_ATGTCA_BC0AYPACXX


title: SEQC_LIF_NWU_A_2_L05_GTGGTGTAAG_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_C_4_L05_ATGTCA_BC0AYPACXX


title: SEQC_ILM_BGI_E_2_L07_GTGGCC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_4_L03_ATGTCA_AC0AYTACXX


title: SEQC_LIF_NWU_A_2_L04_GTGGTGTAAG_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_E_2_L07_GTGGCC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_4_L05_ATGTCA_AC0AYTACXX


title: SEQC_ILM_BGI_C_4_L02_ATGTCA_BC0AYPACXX


title: SEQC_LIF_NWU_A_2_L03_GTGGTGTAAG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_A_2_L03_GTGGTGTAAG_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_E_2_L06_GTGGCC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_2_L02_GTGGTGTAAG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_E_2_L06_GTGGCC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_2_L02_GTGGTGTAAG_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_E_2_L05_GTGGCC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_E_2_L05_GTGGCC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_1_L05_GTGTAAGAGG_FC1_NWU00001_20120220

value: GTGTAAGAGG


title: SEQC_LIF_NWU_A_1_L05_GTGTAAGAGG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_4_L01_ATGTCA_BC0AYPACXX

value: BGI


title: SEQC_LIF_NWU_A_2_L01_GTGGTGTAAG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_2_L01_GTGGTGTAAG_FC2_NWU00001_20120220


title: SEQC_LIF_NWU_A_1_L06_GTGTAAGAGG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_1_L04_GTGTAAGAGG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_1_L06_GTGTAAGAGG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_3_L08_GGCTAC_AC0AYTACXX

value: C

value: GGCTAC


title: SEQC_LIF_NWU_A_2_L04_GTGGTGTAAG_FC2_NWU00001_20120220

value: A


title: SEQC_ILM_BGI_E_2_L04_GTGGCC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_1_L03_GTGTAAGAGG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_3_L07_GGCTAC_BC0AYPACXX


title: SEQC_ILM_BGI_C_3_L08_GGCTAC_BC0AYPACXX


title: SEQC_ILM_BGI_E_2_L04_GTGGCC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_4_L01_ATGTCA_AC0AYTACXX


title: SEQC_ILM_BGI_C_4_L02_ATGTCA_AC0AYTACXX


title: SEQC_LIF_NWU_A_1_L03_GTGTAAGAGG_FC1_NWU00001_20120220


title: SEQC_LIF_NWU_A_1_L04_GTGTAAGAGG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_E_2_L03_GTGGCC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_1_L02_GTGTAAGAGG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_3_L07_GGCTAC_AC0AYTACXX


title: SEQC_ILM_BGI_E_2_L03_GTGGCC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_NWU_A_1_L01_GTGTAAGAGG_FC2_NWU00001_20120220


title: SEQC_ILM_BGI_C_3_L06_GGCTAC_BC0AYPACXX


title: SEQC_LIF_NWU_A_1_L01_GTGTAAGAGG_FC1_NWU00001_20120220


title: SEQC_ILM_BGI_E_2_L02_GTGGCC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_5_L06_GGGTCGGTAT_FC2_23311016_20120217

value: D

value: SQW

value: GGGTCGGTAT


title: SEQC_ILM_BGI_C_3_L06_GGCTAC_AC0AYTACXX


title: SEQC_LIF_SQW_D_5_L06_GGGTCGGTAT_FC1_23311016_20120217

value: AB 5500 Genetic Analyzer


title: SEQC_LIF_SQW_D_5_L05_GGGTCGGTAT_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_3_L05_GGCTAC_BC0AYPACXX

value: Illumina HiSeq 2000


title: SEQC_ILM_BGI_E_2_L02_GTGGCC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_3_L05_GGCTAC_AC0AYTACXX


title: SEQC_LIF_SQW_D_5_L04_GGGTCGGTAT_FC2_23311016_20120217


title: SEQC_ILM_BGI_E_2_L01_GTGGCC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_3_L04_GGCTAC_BC0AYPACXX


title: SEQC_LIF_SQW_D_5_L03_GGGTCGGTAT_FC2_23311016_20120217


title: SEQC_ILM_BGI_E_1_L08_GTCCGC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences

value: GTCCGC


title: SEQC_LIF_SQW_D_5_L02_GGGTCGGTAT_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_5_L05_GGGTCGGTAT_FC1_23311016_20120217


title: SEQC_ILM_BGI_E_2_L01_GTGGCC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_E_1_L08_GTCCGC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_5_L03_GGGTCGGTAT_FC1_23311016_20120217


title: SEQC_LIF_NWU_A_1_L02_GTGTAAGAGG_FC1_NWU00001_20120220


title: SEQC_LIF_SQW_D_5_L02_GGGTCGGTAT_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_5_L01_GGGTCGGTAT_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_5_L01_GGGTCGGTAT_FC1_23311016_20120217


title: SEQC_ILM_BGI_E_1_L07_GTCCGC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_4_L06_GGGAGACGTT_FC2_23311016_20120217

value: GGGAGACGTT


title: SEQC_ILM_BGI_C_3_L03_GGCTAC_AC0AYTACXX


title: SEQC_LIF_SQW_D_4_L06_GGGAGACGTT_FC1_23311016_20120217


title: SEQC_ILM_BGI_E_1_L07_GTCCGC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_4_L05_GGGAGACGTT_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_5_L04_GGGTCGGTAT_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_3_L02_GGCTAC_BC0AYPACXX


title: SEQC_ILM_BGI_E_1_L06_GTCCGC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_4_L05_GGGAGACGTT_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_4_L04_GGGAGACGTT_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_4_L04_GGGAGACGTT_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_3_L04_GGCTAC_AC0AYTACXX


title: SEQC_ILM_BGI_E_1_L05_GTCCGC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_3_L03_GGCTAC_BC0AYPACXX


title: SEQC_ILM_BGI_C_3_L01_GGCTAC_AC0AYTACXX


title: SEQC_ILM_BGI_E_1_L06_GTCCGC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_4_L01_GGGAGACGTT_FC2_23311016_20120217


title: SEQC_ILM_BGI_E_1_L05_GTCCGC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_4_L03_GGGAGACGTT_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_4_L02_GGGAGACGTT_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_2_L08_CAGATC_BC0AYPACXX

value: CAGATC


title: SEQC_LIF_SQW_D_4_L02_GGGAGACGTT_FC1_23311016_20120217


title: SEQC_ILM_BGI_E_1_L04_GTCCGC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_C_3_L01_GGCTAC_BC0AYPACXX


title: SEQC_LIF_SQW_D_4_L01_GGGAGACGTT_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_2_L08_CAGATC_AC0AYTACXX


title: SEQC_LIF_SQW_D_3_L06_AAGAGGAAAA_FC2_23311016_20120217

value: AAGAGGAAAA


title: SEQC_LIF_SQW_D_3_L06_AAGAGGAAAA_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_3_L05_AAGAGGAAAA_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_2_L07_CAGATC_BC0AYPACXX


title: SEQC_LIF_SQW_D_3_L05_AAGAGGAAAA_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_3_L02_GGCTAC_AC0AYTACXX


title: SEQC_ILM_BGI_E_1_L03_GTCCGC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_3_L04_AAGAGGAAAA_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_4_L03_GGGAGACGTT_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_2_L07_CAGATC_AC0AYTACXX


title: SEQC_LIF_SQW_D_3_L04_AAGAGGAAAA_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_2_L06_CAGATC_BC0AYPACXX


title: SEQC_LIF_SQW_D_3_L03_AAGAGGAAAA_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_3_L03_AAGAGGAAAA_FC1_23311016_20120217


title: SEQC_ILM_BGI_E_1_L03_GTCCGC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_ILM_BGI_E_1_L02_GTCCGC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_3_L02_AAGAGGAAAA_FC2_23311016_20120217


title: SEQC_ILM_BGI_E_1_L02_GTCCGC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_3_L01_AAGAGGAAAA_FC2_23311016_20120217


title: SEQC_ILM_BGI_E_1_L01_GTCCGC_BC0AYPACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_3_L01_AAGAGGAAAA_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_2_L06_GAGCGAGGAT_FC2_23311016_20120217

value: GAGCGAGGAT


title: SEQC_LIF_SQW_D_2_L06_GAGCGAGGAT_FC1_23311016_20120217


title: SEQC_ILM_BGI_E_1_L01_GTCCGC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences

value: E


title: SEQC_ILM_BGI_C_2_L05_CAGATC_BC0AYPACXX


title: SEQC_ILM_BGI_C_2_L05_CAGATC_AC0AYTACXX


title: SEQC_ILM_BGI_C_2_L04_CAGATC_BC0AYPACXX


title: SEQC_ILM_BGI_E_1_L04_GTCCGC_AC0AYTACXX

description: 92 poly-A tailed RNA sequences


title: SEQC_LIF_SQW_D_2_L05_GAGCGAGGAT_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_2_L05_GAGCGAGGAT_FC2_23311016_20120217


title: PNFF-hMPN1

city: Zürich

first: Claus

middle: M

last: Azzalin

address: Otto-Stern-Weg 3

department: Institute of Biochemistry

country: Switzerland

institute: ETH Zürich

data_processing:
Basecalls performed using CASAVA version 1.8.2
Reads were aligned to the human or yeast genome using RUM version 2.0.4
A reference collection consisting of RNA features and (for human samples) features from the RepeatMasker database (http://www.repeatmasker.org) was created
Each aligned read was if possible assigned to one of these features with HTSeq-count, using the "union" method to handle read alignments overlapping multiple features
Reads aligning to multiple positions in the genome were defined to contribute "1/N read" to each position
Genome_build: ASM294v1.17 (yeast), hg19 (human)
Supplementary_files_format_and_content: txt files containing the estimated expression level of each quantified feature

source_name: human PN patient cells, compensated with hMPN1

growth_protocol: Logarithmically growing yeast cells  in liquid YES media at 30°C, shaking at 150 rpm; PNFF-derived cells were maintained in DMEM supplemented with 20% fetal bovine serum, non-essential amino acids, penicillin/streptomycin

extract_protocol:
Hot phenol RNA dextraction protocol (Schmitt ME, Brown TA & Trumpower BL (1990) A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae. Nucleic Acids Res. 18: 3091–3092); Trizol reagent was used to isolate total RNA from human cells.
10 µg of total RNA was ligated to Thaliana_lig_2 adaptor oligonucleotides (rArGratcggaagagcgtcgtgtagggaaagag-ddT where r denotes ribonucleotides) using Thaliana tRNA ligase. RNA was purified and treated with 20 U of rSAP (Affymetrix) in rSAP buffer (25 mM Tris-HCl pH 7.5, 50 mM NaCl, 5 mM MgCl2, 1 mM DTT, 1 mM ATP (NEB)) at 37°C for 1 hour in order to remove 2’ phosphates remained on ligated RNA. RNA was fragmented with RNA fragmentation reagent (Ambion). The fragmented RNA was then reverse transcribed using primers complementary to the ligated RACE adaptor. the obtained cDNA was used to construct sequencing library.

tag: subject status

value: poikiloderma with neutropenia (PN) patient

tag: cell type

value: foreskin fibroblasts from PN patient (PNFF)

tag: genotype/variation

value: PNFF-hMPN1; compensated with hMPN1


title: SEQC_LIF_SQW_D_2_L04_GAGCGAGGAT_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_2_L04_CAGATC_AC0AYTACXX

value: C

value: BGI


title: SEQC_LIF_SQW_D_2_L04_GAGCGAGGAT_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_2_L03_GAGCGAGGAT_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_2_L03_CAGATC_BC0AYPACXX


title: SEQC_LIF_SQW_D_2_L03_GAGCGAGGAT_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_2_L06_CAGATC_AC0AYTACXX


title: PNFF-hMPN1 vtRNA1-1

description:
PCR product corresponding to human  vtRNA1-1 snRNA was sequenced.
GQY50

data_processing:
Basecalls performed using CASAVA version 1.8.2
Adapter sequences were removed using cutadapt
Reads were aligned to the indicated reference sequence using BLAT version 35x1. If applicable, read pairs where any of the reads matched the intron were removed.
Read pairs corresponding to full-length species were retained, and the terminal nucleotide sequence was extracted. The frequency of each terminal nucleotide sequence in the sample was computed.
Supplementary_files_format_and_content: txt files containing the frequency of each terminal nucleotide sequence

growth_protocol: PNFF-derived cells were maintained in DMEM supplemented with 20% fetal bovine serum, non-essential amino acids, penicillin/streptomycin

extract_protocol:
Trizol reagent was used to isolate total RNA from human cells.
PNK treated total RNA was purified with the RNA clean and concentrator kit (Zymo Research). 120 pmol of 5’ phosphorylated 3’ RACE adapter oligonucleotide (cctatagtgagtcgtattaattctgtgctcgc(tdd)) were mixed with 3 µg of purified RNA and ligated with T4 RNA ligase as above. 1 µg of ligated RNA was reverse-transcribed with Superscript III (Invitrogen) using adapter-specific oligonucleotide (GCGAGCACAGAATTAATACGACT). cDNA was PCR-amplified with the Phusion High-Fidelity PCR kit (Thermo Scientific) and PCR products were sequenced. Primers to amplify human U6 (acactctttccctacacgacgctcttccgatctcggcagcacatatactaaaattggaac + ctcggcattcctgctgaaccgctcttccgatctcgcggatccgaattaatacgactcactatagg); Primers to amplify U6atac (acactctttccctacacgacgctcttccgatcttgttgtatgaaaggagagaaggttagcactc + ctcggcattcctgctgaaccgctcttccgatctcgcggatccgaattaatacgactcactatagg); Primers to amplify vtRNA1-1 (acactctttccctacacgacgctcttccgatctgctggctttagctcagcggttacttcg + ctcggcattcctgctgaaccgctcttccgatctcgcggatccgaattaatacgactcactatagg)


title: PNFF-ev

source_name: human PN patient cells

value: PNFF-ev


title: SEQC_LIF_SQW_D_3_L02_AAGAGGAAAA_FC1_23311016_20120217

value: D


title: SEQC_ILM_BGI_C_2_L03_CAGATC_AC0AYTACXX


title: SEQC_LIF_SQW_D_2_L01_GAGCGAGGAT_FC1_23311016_20120217

value: SQW


title: SEQC_LIF_SQW_D_2_L02_GAGCGAGGAT_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_1_L06_GGATGCGGTC_FC2_23311016_20120217

value: GGATGCGGTC


title: SEQC_LIF_SQW_D_2_L02_GAGCGAGGAT_FC1_23311016_20120217

value: AB 5500 Genetic Analyzer


title: SEQC_ILM_BGI_C_2_L02_CAGATC_BC0AYPACXX

value: Illumina HiSeq 2000


title: SEQC_ILM_BGI_C_2_L02_CAGATC_AC0AYTACXX


title: SEQC_LIF_SQW_D_1_L06_GGATGCGGTC_FC1_23311016_20120217


title: PNFF-ev U6

description:
PCR product corresponding to human  U6 snRNA was sequenced.
GQY43


title: PNFF-ev vtRNA1-1

description:
PCR product corresponding to human  vtRNA1-1 snRNA was sequenced.
GQY49


title: PNFF-hMPN1 U6atac

description:
PCR product corresponding to human U6atac snRNA was sequenced.
GQY42


title: SEQC_LIF_SQW_D_1_L04_GGATGCGGTC_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_1_L05_GGATGCGGTC_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_1_L04_GGATGCGGTC_FC1_23311016_20120217


title: PNFF-ev U6atac

description:
PCR product corresponding to human U6atac snRNA was sequenced.
GQY41


title: SEQC_ILM_BGI_C_1_L08_TTAGGC_BC0AYPACXX

value: TTAGGC


title: SEQC_LIF_SQW_D_1_L03_GGATGCGGTC_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_1_L03_GGATGCGGTC_FC1_23311016_20120217


title: WT replicate 2

city: Bridgewater

first: Wencheng

last: Li

state: NJ - New Jersey

country: USA

institute: PTC Therapeutics

data_processing:
Reads were mapped to yeast genome (sacCer3) using bowtie2 (local mode). Reads with a mapping quality score (MAPQ) of ≥10 were selected for further analysis.
mRNA abundance was measured using reads per kilobase per million reads (RPKM) based on CDS regions of Ensembl Gene sequences
Genome_build: sacCer3
Supplementary_files_format_and_content: tab delimited file containing information of gene symbol, Ensembl transcript ID and RPKM value of transcript (based on CDS region of transcripts)

organism: Saccharomyces cerevisiae

source_name: WT RNA-seq

extract_protocol:
Phenol/choloroform method was used to extract RNA. For RNA sequencing analyses, the integrity of total RNA was measured by Agilent Bioanalyzer. RNA samples with an integrity number >8.0 were used for further processing. Total RNA was subjected to 2 rounds of poly(A) selection using oligo-dT magnetic beads (NEB) followed by fragmentation using Ambion’s RNA fragmentation kit at 70°C for 5 min. Fragmented RNA was purified by ethanol precipitation followed by dephosphorylation using recombinant shrimp alkaline phosphatase (NEB) and then phosphorylation using T4 kinase (NEB).
Phosphorylated RNA was then purified by RNeasy kit (Qiagen) and was sequentially ligated to a 5′-adenylated 3′ adapter (5′-/5rApp/TGGAATTCTCGGGTGCCAAGG/3ddC/) with the truncated T4 RNA ligase 2 (NEB) and to a 5′ adapter (5′- GUUCAGAGUUCUACAGUCCGACGAUC) with T4 RNA ligase 1 (NEB). The resultant RNA was reverse-transcribed to cDNA with Superscript III (Invitrogen), and the cDNA was amplified by 12 cycles of PCR with Phusion high fidelity polymerase (NEB). Amplified cDNAs were separated on 8% polyacrylamide gels. cDNAs containing an inset size ~100 nt were purified from the gel based on the size. The quality and quantity of the cDNA library were evaluated by Agilent Bioanalyzer and qPCR analysis. The strand-specific cDNA libraries generated by this protocol were sequenced on an Illumina Genome Analyzer IIx.

value: wild type


title: SEQC_LIF_SQW_D_1_L02_GGATGCGGTC_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_2_L01_GAGCGAGGAT_FC2_23311016_20120217


title: WT replicate 1


title: SEQC_ILM_BGI_C_1_L08_TTAGGC_AC0AYTACXX


title: SEQC_ILM_BGI_C_1_L07_TTAGGC_BC0AYPACXX


title: PNFF-hMPN1 U6

description:
PCR product corresponding to human  U6 snRNA was sequenced.
GQY44


title: SEQC_LIF_SQW_D_1_L01_GGATGCGGTC_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_1_L02_GGATGCGGTC_FC1_23311016_20120217


title: SEQC_LIF_SQW_D_1_L01_GGATGCGGTC_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_1_L07_TTAGGC_AC0AYTACXX


title: SEQC_LIF_SQW_C_5_L06_GCGGTGCTTG_FC1_23311016_20120217

value: GCGGTGCTTG


title: SEQC_LIF_SQW_C_5_L05_GCGGTGCTTG_FC2_23311016_20120217


title: SEQC_LIF_SQW_D_1_L05_GGATGCGGTC_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_1_L06_TTAGGC_BC0AYPACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_99810_L_CTL_NU_OG_ACAGTG_s_3)

description: Training Set

data_processing:
Illumina Casava1.7 software used for basecalling and barcode demulplexing.
Magic pipeline, please see the attached supplementary file for details and source code download link
Aceview 2008 gene models for rat
One sample from the training set for agent "CARBON TETRACHLORIDE" was excluded from analysis and data deposition due to sample mislabeling.
Genome_build: RGSC v3.4, identical to Rn4 for the main chromosomes
Supplementary_files_format_and_content: tab-delimited text files include Magic expression indices for each Sample ...

organism: Rattus norvegicus

source_name: Liver

growth_protocol: Upon delivery to testing laboratory male B12 (Crl:CD® (SD)|GS BR) were housed individually in hanging, stainless steel, wire-bottom cages in a ventilated room (temperature, 22±3 ◦C; humidity, 30–70%; 12-h light:12-h dark cycle per day, 6:00 a.m.–6:00 p.m.) and received Certified Rodent Diet #5002 (PMI Feeds Inc.. Richmond, IN); chlorinated tap water was available ad libidum.

extract_protocol:
Automated RNA isolation was performed according to the manufacture’s protocol using the RNeasy Kit from Qiagen (Germantown, MD).
Library preparation including the mRNA enrichment step was performed according to the manufacture’s protocol using the Illumina TruSeq RNA Sample Preparation Kit and SBS Kit v3 (San Diego, CA).  Samples were blinded during the library preparation. Depths of ~23 – 25 million paired-end 100 bp reads were generated for each sample.

treatment_protocol: Animals were acclimated for one week to the testing laboratory prior to dosing.  After dosing, all liver samples were harvested as 100 mg punches using six millimeter disposable biopsy punches. An appropriately staggered schedule was employed so that the harvest times were accurate to ±30 min of the designed dose-to-harvest interval.

tag: tissue

value: liver

tag: strain

value: Sprague-Dawley

value: Control

tag: chemical

value: Vehicle

tag: dose

tag: vehicle

value: CORN OIL 100 %

tag: route

value: ORAL GAVAGE

tag: duration

value: 3 d

value: LIVER

tag: Sex

value: M

value: HiSeq 2000


title: T4V replicate 1

value: T4V mutation in RNAP II CTD


title: T4V replicate 2


title: SEQC_LIF_SQW_C_5_L06_GCGGTGCTTG_FC2_23311016_20120217

tag: seqc sample

value: C

tag: platform

value: SQW


title: SEQC_ILM_BGI_C_2_L01_CAGATC_AC0AYTACXX

value: Illumina HiSeq 2000

tag: site

value: BGI

tag: library id

value: CAGATC


title: SEQC_ILM_BGI_C_1_L06_TTAGGC_AC0AYTACXX

tag: lane

tag: barcode

value: TTAGGC


title: SEQC_ILM_BGI_C_2_L01_CAGATC_BC0AYPACXX

tag: flowcell


title: SEQC_LIF_SQW_C_5_L05_GCGGTGCTTG_FC1_23311016_20120217

value: AB 5500 Genetic Analyzer

value: GCGGTGCTTG


title: SEQC_LIF_SQW_C_5_L04_GCGGTGCTTG_FC1_23311016_20120217


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_99787_L_CTL_NU_OG_CAGATC_s_3)

description: Training Set

value: liver

value: Sprague-Dawley

value: Control


title: SEQC_LIF_SQW_C_5_L04_GCGGTGCTTG_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_5_L03_GCGGTGCTTG_FC1_23311016_20120217


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_99336_L_AFL_NN_OG_ATCACG_s_2)

description: Duplicate run

value: DNA Damage

value: AFLATOXIN B1

value: 0.3 mg/kg

value: CMC .5 %

value: ORAL GAVAGE

value: 5 d


title: SEQC_ILM_BGI_C_1_L05_TTAGGC_BC0AYPACXX

value: C


title: SEQC_ILM_BGI_C_1_L05_TTAGGC_AC0AYTACXX


title: SEQC_LIF_SQW_C_5_L02_GCGGTGCTTG_FC1_23311016_20120217

value: SQW


title: SEQC_LIF_SQW_C_5_L02_GCGGTGCTTG_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_5_L01_GCGGTGCTTG_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_1_L04_TTAGGC_BC0AYPACXX

value: Illumina HiSeq 2000


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_99328_L_AFL_NN_OG_ATCACG_s_4)

description: Duplicate run

value: LIVER

value: M

value: HiSeq 2000


title: SEQC_LIF_SQW_C_4_L06_GAGTTGAATG_FC2_23311016_20120217

value: AB 5500 Genetic Analyzer

value: GAGTTGAATG


title: SEQC_LIF_SQW_C_5_L01_GCGGTGCTTG_FC1_23311016_20120217

value: GCGGTGCTTG


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_99320_L_AFL_NN_OG_ATCACG_s_5)

description: Duplicate run

value: liver

value: Sprague-Dawley


title: SEQC_ILM_BGI_C_1_L04_TTAGGC_AC0AYTACXX

value: BGI

value: TTAGGC


title: SEQC_LIF_SQW_C_4_L06_GAGTTGAATG_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_1_L03_TTAGGC_BC0AYPACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98741_L_CTL_NN_OG_GGCTAC_s_5)

description: Duplicate run

value: Control

value: Vehicle


title: SEQC_LIF_SQW_C_4_L04_GAGTTGAATG_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_4_L05_GAGTTGAATG_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_4_L04_GAGTTGAATG_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_5_L03_GCGGTGCTTG_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_1_L03_TTAGGC_AC0AYTACXX


title: SEQC_ILM_BGI_C_1_L02_TTAGGC_BC0AYPACXX


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98893_L_CTL_NN_IP_ACTTGA_s_2)

description: Training Set

value: SALINE 100 %

value: INTRAPERITONEAL

value: 3 d


title: SEQC_LIF_SQW_C_4_L03_GAGTTGAATG_FC1_23311016_20120217

value: C

value: SQW


title: SEQC_LIF_SQW_C_4_L03_GAGTTGAATG_FC2_23311016_20120217


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98543_L_CTL_NN_OG_GGCTAC_s_2)

description: Training Set

value: CMC .5 %

value: ORAL GAVAGE

value: 5 d

value: LIVER


title: SEQC_LIF_SQW_C_4_L02_GAGTTGAATG_FC2_23311016_20120217

value: AB 5500 Genetic Analyzer

value: GAGTTGAATG


title: SEQC_LIF_SQW_C_4_L05_GAGTTGAATG_FC2_23311016_20120217


title: SEQC_ILM_BGI_C_1_L02_TTAGGC_AC0AYTACXX

value: Illumina HiSeq 2000


title: SEQC_LIF_SQW_C_4_L02_GAGTTGAATG_FC1_23311016_20120217


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98619_L_CTL_NN_OG_TAGCTT_s_4)

description: Duplicate run

value: liver

value: Sprague-Dawley

value: M

value: HiSeq 2000


title: SEQC_LIF_SQW_C_4_L01_GAGTTGAATG_FC2_23311016_20120217


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98482_L_CTL_NN_OG_TGACCA_s_2)

description: Training Set

value: Control

value: Vehicle


title: SEQC_ILM_BGI_C_1_L01_TTAGGC_BC0AYPACXX

value: BGI

value: TTAGGC


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98432_L_CTL_NN_OG_TAGCTT_s_5)

description: Duplicate run


title: SEQC_LIF_SQW_C_4_L01_GAGTTGAATG_FC1_23311016_20120217

value: C


title: SEQC_LIF_SQW_C_3_L06_GTGCGACACG_FC2_23311016_20120217

value: SQW

value: GTGCGACACG


title: SEQC_LIF_SQW_C_3_L06_GTGCGACACG_FC1_23311016_20120217


title: SEQC_ILM_BGI_C_1_L01_TTAGGC_AC0AYTACXX


title: SEQC_ILM_BGI_B_5_L08_GAGTGG_BC0AYPACXX

value: B

value: GAGTGG


title: SEQC_LIF_SQW_C_3_L05_GTGCGACACG_FC2_23311016_20120217


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98348_L_CTL_NU_OG_CGATGT_s_3)

description: Training Set

value: CORN OIL 100 %

value: ORAL GAVAGE

value: 1 d

value: LIVER


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98329_L_CTL_NU_OG_ACAGTG_s_4)

description: Training Set

value: liver

value: 3 d


title: SEQC_LIF_SQW_C_3_L04_GTGCGACACG_FC1_23311016_20120217

value: AB 5500 Genetic Analyzer


title: SEQC_LIF_SQW_C_3_L04_GTGCGACACG_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_5_L08_GAGTGG_AC0AYTACXX

value: Illumina HiSeq 2000


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_98141_L_CTL_NN_OG_CGATGT_s_4)

description: Training Set

value: Sprague-Dawley

value: Control

value: SALINE 100 %

value: 5 d

value: M

value: HiSeq 2000


title: In Vivo Rat Liver Carcinogen (COH_WANG_BC064YACXX_97426_L_CTL_NU_OG_GCCAAT_s_3)

description: Training Set

value: Vehicle


title: SEQC_LIF_SQW_C_3_L01_GTGCGACACG_FC2_23311016_20120217

value: C

value: SQW

value: GTGCGACACG


title: SEQC_LIF_SQW_C_3_L02_GTGCGACACG_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_3_L03_GTGCGACACG_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_5_L06_GAGTGG_BC0AYPACXX

value: B

value: BGI

value: GAGTGG


title: SEQC_ILM_BGI_B_5_L07_GAGTGG_AC0AYTACXX


title: SEQC_LIF_SQW_C_3_L01_GTGCGACACG_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_5_L07_GAGTGG_BC0AYPACXX


title: SEQC_LIF_SQW_C_3_L02_GTGCGACACG_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_2_L06_GGGTTATGCC_FC2_23311016_20120217

value: GGGTTATGCC


title: SEQC_ILM_BGI_B_5_L06_GAGTGG_AC0AYTACXX


title: SEQC_LIF_SQW_C_2_L06_GGGTTATGCC_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_2_L05_GGGTTATGCC_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_2_L05_GGGTTATGCC_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_5_L05_GAGTGG_BC0AYPACXX


title: SEQC_LIF_SQW_C_2_L04_GGGTTATGCC_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_3_L05_GTGCGACACG_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_2_L03_GGGTTATGCC_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_5_L04_GAGTGG_BC0AYPACXX


title: SEQC_ILM_BGI_B_5_L04_GAGTGG_AC0AYTACXX


title: SEQC_ILM_BGI_B_5_L05_GAGTGG_AC0AYTACXX


title: SEQC_LIF_SQW_C_2_L03_GGGTTATGCC_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_3_L03_GTGCGACACG_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_2_L02_GGGTTATGCC_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_2_L01_GGGTTATGCC_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_2_L02_GGGTTATGCC_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_5_L03_GAGTGG_AC0AYTACXX


title: SEQC_LIF_SQW_C_2_L01_GGGTTATGCC_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_5_L02_GAGTGG_AC0AYTACXX


title: SEQC_ILM_BGI_B_5_L01_GAGTGG_AC0AYTACXX


title: SEQC_ILM_BGI_B_4_L08_AGTTCC_BC0AYPACXX

value: AGTTCC


title: SEQC_ILM_BGI_B_4_L08_AGTTCC_AC0AYTACXX


title: SEQC_LIF_SQW_C_1_L06_ATAGGTTATA_FC1_23311016_20120217

value: AB 5500 Genetic Analyzer

value: ATAGGTTATA


title: SEQC_LIF_SQW_C_1_L05_ATAGGTTATA_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_1_L05_ATAGGTTATA_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_1_L06_ATAGGTTATA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_5_L01_GAGTGG_BC0AYPACXX

value: Illumina HiSeq 2000


title: SEQC_ILM_BGI_B_4_L07_AGTTCC_BC0AYPACXX


title: SEQC_LIF_SQW_C_1_L04_ATAGGTTATA_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_1_L04_ATAGGTTATA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_4_L07_AGTTCC_AC0AYTACXX


title: SEQC_ILM_BGI_B_4_L06_AGTTCC_BC0AYPACXX


title: SEQC_LIF_SQW_C_1_L03_ATAGGTTATA_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_2_L04_GGGTTATGCC_FC1_23311016_20120217


title: SEQC_LIF_SQW_C_1_L03_ATAGGTTATA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_5_L03_GAGTGG_BC0AYPACXX


title: SEQC_LIF_SQW_C_1_L02_ATAGGTTATA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_4_L05_AGTTCC_BC0AYPACXX


title: SEQC_ILM_BGI_B_4_L04_AGTTCC_BC0AYPACXX


title: SEQC_ILM_BGI_B_5_L02_GAGTGG_BC0AYPACXX


title: SEQC_ILM_BGI_B_4_L05_AGTTCC_AC0AYTACXX


title: SEQC_LIF_SQW_C_1_L02_ATAGGTTATA_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_1_L01_ATAGGTTATA_FC2_23311016_20120217


title: SEQC_LIF_SQW_C_1_L01_ATAGGTTATA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_5_L06_GAGAAGATGA_FC2_23311016_20120217

value: GAGAAGATGA


title: SEQC_ILM_BGI_B_4_L03_AGTTCC_BC0AYPACXX


title: SEQC_LIF_SQW_B_5_L06_GAGAAGATGA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_4_L04_AGTTCC_AC0AYTACXX


title: SEQC_LIF_SQW_B_5_L05_GAGAAGATGA_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_5_L05_GAGAAGATGA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_4_L03_AGTTCC_AC0AYTACXX


title: SEQC_LIF_SQW_B_5_L04_GAGAAGATGA_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_5_L04_GAGAAGATGA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_4_L01_AGTTCC_AC0AYTACXX


title: SEQC_ILM_BGI_B_4_L01_AGTTCC_BC0AYPACXX


title: SEQC_ILM_BGI_B_4_L02_AGTTCC_BC0AYPACXX


title: SEQC_LIF_SQW_B_5_L03_GAGAAGATGA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_5_L02_GAGAAGATGA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_3_L08_TAGCTT_AC0AYTACXX

value: TAGCTT


title: SEQC_ILM_BGI_B_4_L06_AGTTCC_AC0AYTACXX


title: SEQC_ILM_BGI_B_3_L07_TAGCTT_BC0AYPACXX


title: SEQC_LIF_SQW_B_5_L02_GAGAAGATGA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_3_L07_TAGCTT_AC0AYTACXX


title: SEQC_LIF_SQW_B_5_L01_GAGAAGATGA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_3_L06_TAGCTT_BC0AYPACXX


title: SEQC_ILM_BGI_B_3_L06_TAGCTT_AC0AYTACXX


title: SEQC_LIF_SQW_B_5_L01_GAGAAGATGA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_4_L06_GTGCGGCAGA_FC1_23311016_20120217

value: GTGCGGCAGA


title: SEQC_LIF_SQW_B_4_L05_GTGCGGCAGA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_3_L05_TAGCTT_BC0AYPACXX


title: SEQC_ILM_BGI_B_4_L02_AGTTCC_AC0AYTACXX


title: SEQC_ILM_BGI_B_3_L04_TAGCTT_BC0AYPACXX


title: SEQC_LIF_SQW_B_4_L05_GTGCGGCAGA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_3_L04_TAGCTT_AC0AYTACXX


title: SEQC_LIF_SQW_B_4_L04_GTGCGGCAGA_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_5_L03_GAGAAGATGA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_3_L08_TAGCTT_BC0AYPACXX


title: SEQC_LIF_SQW_B_4_L04_GTGCGGCAGA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_4_L02_GTGCGGCAGA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_3_L03_TAGCTT_AC0AYTACXX


title: SEQC_LIF_SQW_B_4_L02_GTGCGGCAGA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_3_L01_TAGCTT_BC0AYPACXX


title: SEQC_ILM_BGI_B_3_L01_TAGCTT_AC0AYTACXX


title: SEQC_ILM_BGI_B_3_L02_TAGCTT_BC0AYPACXX


title: SEQC_LIF_SQW_B_4_L03_GTGCGGCAGA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_4_L01_GTGCGGCAGA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_2_L08_GCCAAT_BC0AYPACXX

value: GCCAAT


title: SEQC_LIF_SQW_B_4_L06_GTGCGGCAGA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_2_L08_GCCAAT_AC0AYTACXX


title: SEQC_LIF_SQW_B_3_L06_GCGGTAAGCT_FC1_23311016_20120217

value: GCGGTAAGCT


title: SEQC_ILM_BGI_B_2_L07_GCCAAT_BC0AYPACXX


title: SEQC_ILM_BGI_B_2_L07_GCCAAT_AC0AYTACXX


title: SEQC_LIF_SQW_B_3_L05_GCGGTAAGCT_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_2_L06_GCCAAT_BC0AYPACXX


title: SEQC_ILM_BGI_B_3_L05_TAGCTT_AC0AYTACXX


title: SEQC_LIF_SQW_B_3_L06_GCGGTAAGCT_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_4_L01_GTGCGGCAGA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_3_L03_TAGCTT_BC0AYPACXX


title: SEQC_ILM_BGI_B_3_L02_TAGCTT_AC0AYTACXX


title: SEQC_ILM_BGI_B_2_L05_GCCAAT_BC0AYPACXX


title: SEQC_LIF_SQW_B_3_L04_GCGGTAAGCT_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_2_L06_GCCAAT_AC0AYTACXX


title: SEQC_LIF_SQW_B_4_L03_GTGCGGCAGA_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_3_L05_GCGGTAAGCT_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_3_L03_GCGGTAAGCT_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_3_L04_GCGGTAAGCT_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_2_L05_GCCAAT_AC0AYTACXX


title: SEQC_ILM_BGI_B_2_L04_GCCAAT_AC0AYTACXX


title: SEQC_LIF_SQW_B_3_L03_GCGGTAAGCT_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_3_L02_GCGGTAAGCT_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_3_L01_GCGGTAAGCT_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_2_L03_GCCAAT_AC0AYTACXX


title: SEQC_ILM_BGI_B_2_L03_GCCAAT_BC0AYPACXX


title: SEQC_LIF_SQW_B_3_L02_GCGGTAAGCT_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_2_L02_GCCAAT_BC0AYPACXX


title: SEQC_LIF_SQW_B_3_L01_GCGGTAAGCT_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_2_L02_GCCAAT_AC0AYTACXX


title: SEQC_ILM_BGI_B_2_L01_GCCAAT_AC0AYTACXX


title: SEQC_ILM_BGI_B_1_L08_CGATGT_BC0AYPACXX

value: CGATGT


title: SEQC_ILM_BGI_B_2_L01_GCCAAT_BC0AYPACXX


title: SEQC_LIF_SQW_B_2_L05_GCGAGGGACA_FC2_23311016_20120217

value: GCGAGGGACA


title: SEQC_LIF_SQW_B_2_L06_GCGAGGGACA_FC2_23311016_20120217

value: SQW


title: SEQC_LIF_SQW_B_2_L06_GCGAGGGACA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_2_L05_GCGAGGGACA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_2_L04_GCGAGGGACA_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_2_L04_GCGAGGGACA_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_1_L07_CGATGT_AC0AYTACXX


title: SEQC_ILM_BGI_B_2_L04_GCCAAT_BC0AYPACXX


title: SEQC_ILM_BGI_B_1_L07_CGATGT_BC0AYPACXX


title: SEQC_ILM_BGI_B_1_L06_CGATGT_BC0AYPACXX


title: SEQC_LIF_SQW_B_2_L03_GCGAGGGACA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_1_L08_CGATGT_AC0AYTACXX


title: SEQC_LIF_SQW_B_2_L03_GCGAGGGACA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_2_L02_GCGAGGGACA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_1_L06_CGATGT_AC0AYTACXX


title: SEQC_LIF_SQW_B_2_L02_GCGAGGGACA_FC1_23311016_20120217


title: SEQC_LIF_SQW_B_2_L01_GCGAGGGACA_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_1_L05_CGATGT_AC0AYTACXX


title: SEQC_ILM_BGI_B_1_L04_CGATGT_BC0AYPACXX


title: SEQC_ILM_BGI_B_1_L04_CGATGT_AC0AYTACXX


title: SEQC_LIF_SQW_B_1_L06_AGGGAGTGGT_FC2_23311016_20120217

value: AGGGAGTGGT


title: SEQC_LIF_SQW_B_2_L01_GCGAGGGACA_FC1_23311016_20120217

value: B


title: SEQC_LIF_SQW_B_1_L06_AGGGAGTGGT_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_1_L03_CGATGT_AC0AYTACXX

value: BGI


title: SEQC_LIF_SQW_B_1_L05_AGGGAGTGGT_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_1_L05_AGGGAGTGGT_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_1_L02_CGATGT_AC0AYTACXX


title: SEQC_ILM_BGI_B_1_L02_CGATGT_BC0AYPACXX


title: SEQC_LIF_SQW_B_1_L04_AGGGAGTGGT_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_1_L01_CGATGT_BC0AYPACXX


title: SEQC_LIF_SQW_B_1_L04_AGGGAGTGGT_FC1_23311016_20120217


title: SEQC_ILM_BGI_B_1_L01_CGATGT_AC0AYTACXX


title: SEQC_LIF_SQW_B_1_L03_AGGGAGTGGT_FC2_23311016_20120217


title: SEQC_ILM_BGI_B_1_L05_CGATGT_BC0AYPACXX


title: SEQC_ILM_BGI_A_5_L08_CGTACG_BC0AYPACXX

value: A

value: CGTACG


title: SEQC_ILM_BGI_A_5_L08_CGTACG_AC0AYTACXX


title: SEQC_LIF_SQW_B_1_L02_AGGGAGTGGT_FC2_23311016_20120217


title: SEQC_LIF_SQW_B_1_L01_AGGGAGTGGT_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_5_L07_CGTACG_AC0AYTACXX


title: SEQC_LIF_SQW_B_1_L02_AGGGAGTGGT_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_5_L07_CGTACG_BC0AYPACXX


title: SEQC_ILM_BGI_B_1_L03_CGATGT_BC0AYPACXX


title: SEQC_ILM_BGI_A_5_L06_CGTACG_BC0AYPACXX


title: SEQC_ILM_BGI_A_5_L06_CGTACG_AC0AYTACXX


title: SEQC_LIF_SQW_B_1_L01_AGGGAGTGGT_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_5_L05_CGTACG_BC0AYPACXX


title: SEQC_ILM_BGI_A_5_L05_CGTACG_AC0AYTACXX


title: SEQC_LIF_SQW_A_5_L06_GTGCGGTTCC_FC1_23311016_20120217

value: GTGCGGTTCC


title: SEQC_LIF_SQW_A_5_L05_GTGCGGTTCC_FC1_23311016_20120217

value: AB 5500 Genetic Analyzer


title: SEQC_ILM_BGI_A_5_L04_CGTACG_AC0AYTACXX


title: SEQC_LIF_SQW_A_5_L04_GTGCGGTTCC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_5_L03_CGTACG_BC0AYPACXX


title: SEQC_LIF_SQW_A_5_L03_GTGCGGTTCC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_5_L03_CGTACG_AC0AYTACXX


title: SEQC_LIF_SQW_B_1_L03_AGGGAGTGGT_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_5_L02_CGTACG_BC0AYPACXX


title: SEQC_LIF_SQW_A_5_L03_GTGCGGTTCC_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_5_L04_GTGCGGTTCC_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_5_L02_GTGCGGTTCC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_5_L01_CGTACG_BC0AYPACXX


title: SEQC_ILM_BGI_A_5_L02_CGTACG_AC0AYTACXX


title: SEQC_ILM_BGI_A_5_L01_CGTACG_AC0AYTACXX


title: SEQC_LIF_SQW_A_5_L02_GTGCGGTTCC_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_4_L08_AGTCAA_BC0AYPACXX

value: AGTCAA


title: SEQC_LIF_SQW_A_5_L01_GTGCGGTTCC_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_5_L06_GTGCGGTTCC_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_5_L01_GTGCGGTTCC_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_4_L06_GCGGTAAGGC_FC2_23311016_20120217

value: GCGGTAAGGC


title: SEQC_LIF_SQW_A_4_L06_GCGGTAAGGC_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_4_L07_AGTCAA_BC0AYPACXX

value: Illumina HiSeq 2000


title: SEQC_ILM_BGI_A_4_L07_AGTCAA_AC0AYTACXX


title: SEQC_ILM_BGI_A_5_L04_CGTACG_BC0AYPACXX


title: SEQC_LIF_SQW_A_5_L05_GTGCGGTTCC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_4_L08_AGTCAA_AC0AYTACXX


title: SEQC_LIF_SQW_A_4_L04_GCGGTAAGGC_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_4_L05_GCGGTAAGGC_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_4_L05_GCGGTAAGGC_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_4_L06_AGTCAA_AC0AYTACXX


title: SEQC_ILM_BGI_A_4_L05_AGTCAA_BC0AYPACXX


title: SEQC_LIF_SQW_A_4_L04_GCGGTAAGGC_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_4_L03_GCGGTAAGGC_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_4_L03_GCGGTAAGGC_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_4_L02_GCGGTAAGGC_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_4_L02_GCGGTAAGGC_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_4_L04_AGTCAA_BC0AYPACXX


title: SEQC_ILM_BGI_A_4_L04_AGTCAA_AC0AYTACXX


title: SEQC_ILM_BGI_A_4_L03_AGTCAA_AC0AYTACXX


title: SEQC_LIF_SQW_A_4_L01_GCGGTAAGGC_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_4_L01_AGTCAA_BC0AYPACXX


title: SEQC_ILM_BGI_A_4_L02_AGTCAA_BC0AYPACXX


title: SEQC_LIF_SQW_A_3_L06_AGGTTGCGAC_FC2_23311016_20120217

value: AGGTTGCGAC


title: SEQC_ILM_BGI_A_4_L02_AGTCAA_AC0AYTACXX


title: SEQC_ILM_BGI_A_4_L01_AGTCAA_AC0AYTACXX


title: SEQC_LIF_SQW_A_4_L01_GCGGTAAGGC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_3_L08_GATCAG_BC0AYPACXX

value: GATCAG


title: SEQC_ILM_BGI_A_4_L06_AGTCAA_BC0AYPACXX


title: SEQC_LIF_SQW_A_3_L05_AGGTTGCGAC_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_3_L06_AGGTTGCGAC_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_3_L04_AGGTTGCGAC_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_3_L05_AGGTTGCGAC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_3_L08_GATCAG_AC0AYTACXX


title: SEQC_ILM_BGI_A_3_L07_GATCAG_BC0AYPACXX


title: SEQC_LIF_SQW_A_3_L04_AGGTTGCGAC_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_3_L07_GATCAG_AC0AYTACXX


title: SEQC_ILM_BGI_A_4_L05_AGTCAA_AC0AYTACXX


title: SEQC_ILM_BGI_A_3_L06_GATCAG_BC0AYPACXX


title: SEQC_LIF_SQW_A_3_L03_AGGTTGCGAC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_4_L03_AGTCAA_BC0AYPACXX


title: SEQC_LIF_SQW_A_3_L03_AGGTTGCGAC_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_3_L06_GATCAG_AC0AYTACXX


title: SEQC_ILM_BGI_A_3_L05_GATCAG_BC0AYPACXX


title: SEQC_LIF_SQW_A_3_L01_AGGTTGCGAC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_3_L05_GATCAG_AC0AYTACXX


title: SEQC_LIF_SQW_A_3_L02_AGGTTGCGAC_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_3_L04_GATCAG_AC0AYTACXX


title: SEQC_LIF_SQW_A_3_L01_AGGTTGCGAC_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_2_L06_GTGGTGTAAG_FC2_23311016_20120217

value: GTGGTGTAAG


title: SEQC_ILM_BGI_A_3_L03_GATCAG_BC0AYPACXX


title: SEQC_ILM_BGI_A_3_L03_GATCAG_AC0AYTACXX


title: SEQC_ILM_BGI_A_3_L02_GATCAG_BC0AYPACXX


title: SEQC_ILM_BGI_A_3_L02_GATCAG_AC0AYTACXX


title: SEQC_LIF_SQW_A_2_L04_GTGGTGTAAG_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_2_L05_GTGGTGTAAG_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_3_L01_GATCAG_AC0AYTACXX


title: SEQC_LIF_SQW_A_2_L03_GTGGTGTAAG_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_2_L04_GTGGTGTAAG_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_2_L06_GTGGTGTAAG_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_2_L03_GTGGTGTAAG_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_2_L08_ACAGTG_AC0AYTACXX

value: ACAGTG


title: SEQC_LIF_SQW_A_2_L02_GTGGTGTAAG_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_3_L02_AGGTTGCGAC_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_2_L07_ACAGTG_BC0AYPACXX


title: SEQC_ILM_BGI_A_2_L07_ACAGTG_AC0AYTACXX


title: SEQC_ILM_BGI_A_3_L04_GATCAG_BC0AYPACXX


title: SEQC_ILM_BGI_A_2_L08_ACAGTG_BC0AYPACXX


title: SEQC_LIF_SQW_A_2_L01_GTGGTGTAAG_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_1_L06_GTGTAAGAGG_FC2_23311016_20120217

value: GTGTAAGAGG


title: SEQC_ILM_BGI_A_2_L05_ACAGTG_BC0AYPACXX


title: SEQC_LIF_SQW_A_2_L01_GTGGTGTAAG_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_2_L06_ACAGTG_AC0AYTACXX


title: SEQC_LIF_SQW_A_2_L05_GTGGTGTAAG_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_2_L04_ACAGTG_BC0AYPACXX


title: SEQC_LIF_SQW_A_1_L06_GTGTAAGAGG_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_2_L05_ACAGTG_AC0AYTACXX


title: SEQC_ILM_BGI_A_3_L01_GATCAG_BC0AYPACXX


title: SEQC_LIF_SQW_A_1_L05_GTGTAAGAGG_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_1_L05_GTGTAAGAGG_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_2_L03_ACAGTG_AC0AYTACXX


title: SEQC_ILM_BGI_A_2_L04_ACAGTG_AC0AYTACXX


title: SEQC_LIF_SQW_A_1_L04_GTGTAAGAGG_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_1_L04_GTGTAAGAGG_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_2_L02_ACAGTG_BC0AYPACXX


title: SEQC_LIF_SQW_A_1_L03_GTGTAAGAGG_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_1_L03_GTGTAAGAGG_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_2_L02_ACAGTG_AC0AYTACXX


title: SEQC_LIF_SQW_A_2_L02_GTGGTGTAAG_FC1_23311016_20120217


title: SEQC_LIF_SQW_A_1_L02_GTGTAAGAGG_FC2_23311016_20120217


title: SEQC_LIF_SQW_A_1_L02_GTGTAAGAGG_FC1_23311016_20120217


title: SEQC_ILM_BGI_A_2_L01_ACAGTG_BC0AYPACXX


title: SEQC_ILM_BGI_A_2_L01_ACAGTG_AC0AYTACXX


title: SEQC_LIF_SQW_A_1_L01_GTGTAAGAGG_FC2_23311016_20120217


title: SEQC_ILM_BGI_A_1_L08_ATCACG_BC0AYPACXX

value: ATCACG


title: SEQC_ILM_BGI_A_1_L08_ATCACG_AC0AYTACXX


title: SEQC_ILM_BGI_A_1_L07_ATCACG_BC0AYPACXX


title: SEQC_ILM_BGI_A_1_L07_ATCACG_AC0AYTACXX


title: SEQC_ILM_BGI_A_1_L06_ATCACG_BC0AYPACXX


title: SEQC_ILM_BGI_A_2_L03_ACAGTG_BC0AYPACXX


title: SEQC_ILM_BGI_A_2_L06_ACAGTG_BC0AYPACXX


title: SEQC_ILM_BGI_A_1_L06_ATCACG_AC0AYTACXX


title: aged-6 [miRNA]

city: Daejon

first: Ji Young

last: Kim

address: Aging Research Center, Korea Reseach Institute of Bioscience

country: South Korea

institute: KRIBB

data_processing:
Illumina Casava1.7 software used for basecalling.
mapped to mm10 whole genome using Tophat 2.
Reads Per Kilobase of exon per Megabase of library size (RPKM) were calculated  using a standard protocol. The rpkm values are on log2 scale.
Genome_build: mm10
Supplementary_files_format_and_content: tab-delimited text files include RPKM values

organism: Mus musculus

source_name: aged_gastrocnemius muscle

extract_protocol:
Small RNA enriched total RNA extraction protocol using mirVana miRNA isolation kit
small RNA libraries were prepared for sequencing using standard Illumina protocols.

tag: age

value: 24 months (aged)

value: gastrocnemius muscle

tag: molecule subtype

value: small RNA


title: SEQC_ILM_BGI_A_1_L05_ATCACG_BC0AYPACXX

value: BGI


title: SEQC_ILM_BGI_A_1_L05_ATCACG_AC0AYTACXX

value: A


title: aged-3 [miRNA]

description: Sample 9

tag: tissue


title: aged-5 [miRNA]

tag: strain


title: aged-2 [miRNA]

description: Sample 8


title: aged-1 [miRNA]

description: Sample 7


title: SEQC_ILM_BGI_A_1_L04_ATCACG_BC0AYPACXX


title: SEQC_ILM_BGI_A_1_L04_ATCACG_AC0AYTACXX


title: young-6 [miRNA]

description: Sample 6

source_name: young_gastrocnemius muscle

value: 6 months (young)


title: SEQC_ILM_BGI_A_1_L03_ATCACG_AC0AYTACXX


title: young-5 [miRNA]

description: Sample 5


title: SEQC_ILM_BGI_A_1_L03_ATCACG_BC0AYPACXX


title: young-4 [miRNA]

description: Sample 4


title: young-3 [miRNA]

description: Sample 3


title: SEQC_ILM_BGI_A_1_L02_ATCACG_BC0AYPACXX


title: SEQC_ILM_BGI_A_1_L02_ATCACG_AC0AYTACXX


title: SEQC_ILM_BGI_A_1_L01_ATCACG_BC0AYPACXX


title: SEQC_LIF_SQW_A_1_L01_GTGTAAGAGG_FC1_23311016_20120217

value: SQW


title: young-2 [miRNA]

description: Sample 2


title: SEQC_ILM_BGI_A_1_L01_ATCACG_AC0AYTACXX


title: aged-4 [miRNA]


title: young-1 [miRNA]

description: Sample 1


title: aged-4

description: Sample 9

extract_protocol:
Standard RNA extraction protocol using Qiagen RNA mini kit
RNA libraries were prepared for sequencing using standard Illumina protocols.


title: aged-5


title: aged-2

description: Sample 7


title: LXRdKO_2

city: San Francisco

first: Jason

last: Cyster

state: California

address: 513 Parnassus Avenue

institute: University of California - San Francisco

data_processing:
Base calling performed using RTA (Real-time Analysis), demultiplexed FASTQ files generated using CASAVA
RNA-seq reads were aligned using STAR (version 2.3.0) to output read alignments that map once to the genome; other parameters were set as default
Aligned reads from STAR were then counted for each gene using HTSeq
Genome_build: mm10
Supplementary_files_format_and_content: Excel spreadsheet containing gene expression matrix with number of reads per gene

source_name: LXRab-knockout bone marrow-derived macrophages

growth_protocol: Bone marrow-derived macrophages generated by culturing BM in 10% M-CSF in DMEM for 7 days.

extract_protocol:
Cells were washed with PBS and flash frozen in liquid nitrogen. RNA was extracted using a Qiagen RNeasy kit
Sequencing libraries were constructed using 100ng of RNA with the Ovation RNA-seq System V2 and Encore Rapid Library System

treatment_protocol: BMDMs were stimulated with 100ng/ml LPS (E. coli 0111:B4; Sigma) for 8hrs

tag: day of culture

tag: genotype/variation

value: LXRdKO


title: WT_2

source_name: Wild type bone marrow-derived macrophages

value: wild type


title: Ch25hKO_2

source_name: Ch25h-knockout bone marrow-derived macrophages


title: young-5

description: Sample 5


title: WT_1


title: aged-1

description: Sample 6


title: young-3

description: Sample 3


title: young-4

description: Sample 4


title: young-2

description: Sample 2


title: PCV2 ORF2

city: Seoul

first: Jae-Sang

last: Hong

state: Seoul

address: building life science and biotech west building L204

institute: Korea University

data_processing:
Basecalls performed using CASAVA version 1.4
After eliminating all low-quality sequences, the reads ranging in size between 18 and 36 nts were retrieved and trimmed of the adaptor sequences to produce ‘clean reads.’ The filtered datasets were analyzed for small RNA length distribution and then aligned to the porcine genome (Sscrofa10.2) using the SOAP program (version 2.20), parameter: soap -v 0 -r 2 -M 0.
all the clean reads were screened against public databases for annotation. To avoid repeated annotation of the reads, bioinformatic analysis was performed in the following order: non-coding RNAs other than miRNAs > miRNAs.> repeat-associated small RNAs > mRNAs. The Rfam (http://rfam.xfam.org) and NCBI GenBank (http://www.ncbi.nlm.nih.gov) databases were used to identify sequences matching repeats, mRNAs, and non-coding RNAs (e.g., rRNA, tRNA, snRNA, and snoRNA) other than miRNAs.
To identify known porcine miRNAs, the total clean reads from each library were aligned to porcine pre-miRNAs and mature miRNAs annotated in miRBase (release 20.0; http://www.mirbase.org) using BLASTN
Only reads perfectly matching pre-miRNAs but partially matching their corresponding mature miRNAs with at least 16 nt overlap were considered to represent known porcine miRNA.
Genome_build: Sscrofa10.2
Supplementary_files_format_and_content: text files include unique sequence and read count of each sample.

organism: Sus scrofa

source_name: PK15 cell

growth_protocol: 90% DMEM + 10% FBS + antibiotics

extract_protocol: We used small RNAs as an input to construct a cDNA library using a TruSeq Small RNA Sample Preparation kit (Illumina) following the manufacturer’s protocol.

tag: genotype

value: PCV2 ORF2+

tag: origin tissue

value: porcine kidney


title: PCV2 ORF1

value: PCV2 ORF1+


title: young-1

description: Sample 1


title: aged-3

description: Sample 8


title: Control


title: inhibitor_708_rep1

status: Public on Aug 07 2014

city: Singapore

first: Lei

last: Sun

address: 8 College Road

country: Singapore

institute: Duke-NUS

data_processing:
Reads were aligned to mm10, using Tophat (version tophat-2.0.9) . Differential expression was performed using Cuffdiff (version 2.1.1).
Genome_build: mm10
Supplementary_files_format_and_content: RPKM and fold-change

source_name: adipocytes

growth_protocol: Briefly, tissue depots were digested in 0.2% collagenase at 37ºC for 25-30min. Digested tissues were filtered through a 100um membrane and SVF cells were collected by centrifugation at 1500rpm for 5min. After centrifugation, the mature adipocytes floating on top were collected for genotying analysis. The freshly isolated SVF cells were seeded and cultured in DMEM containing 10% new born calf serum and 0.5% penicillin/streptomycin at 37ºC with 5% CO2. On confluence, the cells were induced to differentiate for 2 days with DMEM containing 10% FBS, 850nM of insulin, 0.5uM of dexamethasone (Sigma), 250uM of 3-isobutyl-methylxanthine (IBMX) (Sigma) and 1VM of rosiglitazone (Sigma) in DMEM. The induction medium was replaced with DMEM containing 10% FBS and 160nM insulin for 2 days. Then cell were incubated in DMEM with 10% FBS.

extract_protocol:
Qiagen miRNeasy Mini Kit
NEBNext® Ultra™ Directional RNA Library Prep Kit

treatment_protocol: For transfection, primary preadiocytes were kept in culture medium until 80-90% confluence. Then Locked Nucleic Acid (LNAs) miRNA inhibitors (100nM) were transfected by Lipofectaimine RNAi Max (Invitrogen) according to the manufacturer’s instruction. 8 hours after transfection, cells were recovered in full culture media and induced to differentiation. Four days after differentiation RNAs were harvested for analysis.

tag: transfection


title: inhibitor_708_rep2


title: LXRdKO_1


title: inhibitor_203_rep2


title: NC_rep1

value: control


title: inhibitor_203_rep1


title: inhibitor_182_rep2


title: Ch25hKO_1


title: inhibitor_182_rep1


title: Granta519-IgG Run1

city: New York

first: Samir

last: Parekh

state: NY

address: 1470 Madison Ave, 5th FL, Room 114

department: Hematology and Medical Oncology

institute: Icahn School of Medicine at Mount Sinai

library_source: genomic

data_processing:
Sequence data (base call files or bcl files) generated from the sequencer are converted to fastq files using the Illumina CASAVA 1.8.2 pipeline
The sequence data are aligned to genomes Human genome hg18 via Illumina's iGenome using Gerald (Illumina’s ELAND aligner) via the CASAVA 1.8.2 pipeline. Only raw reads that pass Illumina's purity filter are aligned.
peaks were called using PeaksFind version 2.2 with the following setting: ChIP threshold (0.2), Enrichment Fold (2.5), Rescue Fold (3).
Genome_build: hg18
Supplementary_files_format_and_content: The processed data is supplied in bigBed file format.

molecule: genomic DNA

source_name: MCL Cell line

growth_protocol: Granta-519 was grown in a humidified incubator at 37°C and 5% CO2 with RPMI 1640 medium (Cellgro, Herndon, VA) supplemented with 10% fetal bovine serum (FBS; Gemini Bio-Products, Woodland, CA), 2 mM L-glutamine, 100 units/mL of penicillin G and 100 µg/mL of streptomycin (Cellgro, Herndon, VA).

extract_protocol:
Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody.
Libraries were prepared according to Illumina's instructions accompanying the DNA Sample Kit (Part# 0801-0303). Briefly, DNA was end-repaired using a combination of T4 DNA polymerase, E. coli DNA Pol I large fragment (Klenow polymerase) and T4 polynucleotide kinase. The blunt, phosphorylated ends were treated with Klenow fragment (32 to 52 exo minus) and dATP to yield a protruding 3- 'A' base for ligation of Illumina's adapters which have a single 'T' base overhang at the 3’ end. After adapter ligation DNA was PCR amplified with Illumina primers for 15 cycles and library fragments of ~250 bp (insert plus adaptor and PCR primer sequences) were band isolated from an agarose gel. The purified DNA was captured on an Illumina flow cell for cluster generation. Libraries were sequenced on the Genome Analyzer following the manufacturer's protocols.

treatment_protocol: Granta-519 cell line was transfected with 100uM SOX11 specific siRNA or control scarmble siRNA uisng Amaxa program G16, Kit T (Lonza).  Cells were harvested 42-46 hours after transfection.

tag: cell line

tag: passages

value: Less than 15 passages

tag: chip antibody

value: IgG (Cell Signaling, 2729)


title: Granta519-SOX11 Run1

value: Anti-SOX11 (Sigma, HPA000536. Lot:B33103)


title: Granta519-IgG Run2


title: JEKO-1  SOX11 siRNA

description: SOX11 depletion

data_processing:
Sequence data generated from the sequencer were run through in house pipeline WASP - 3.0.60. FASTQ files are  generated from Illumina QSEQ files, include Sanger (Phred+33) encoded quality scores
Raw FASTQ files were trimmed for adapter sequences using quart.
Alignment to the reference genome was performed using gsnap.
htseq - v0.5.3p3  was used for read quantitation
Reads Per Kilobase of exon per Megabase of library size (RPKM) were calculated using a protocol from Chepelev et al., Nucleic Acids Research, 2009. In short, exons from all isoforms of a gene were merged to create one meta-transcript. The number of reads falling in the exons of this meta-transcript were counted and normalized by the size of the meta-transcript and by the size of the library.
Genome_build: Hg19
Supplementary_files_format_and_content: Excel file containing RPKM values and Gene symbols for each Sample.

source_name: MCL cell line

growth_protocol: The MCL cell lines Granta-519, JEKO-1 and Z138 were grown in a humidified incubator at 37°C and 5% CO2 with RPMI 1640 medium (Cellgro, Herndon, VA) supplemented with 10% fetal bovine serum (FBS; Gemini Bio-Products, Woodland, CA), 2 mM L-glutamine, 100 units/mL of penicillin G and 100 µg/mL of streptomycin (Cellgro, Herndon, VA).

extract_protocol:
Cell pellets were lysed in TRIzol (Life Technology, Cat.#  15596-026 ) and total RNA were extracted with PureLink RNA Mini kit (Life Technology, Cat.#  12183018A) following manufacturer's instructions.
RNA libraries were prepared for sequencing from 100 ng of total RNA using Illumina TruSeq RNA sample (Illumina, # FC-122-1001)preparation kit following manufacturer's instructions.

treatment_protocol: 7 million MCL cells were transfected with 100 uM of either SOX11 siRNA or non-targeting siRNA using the Amaxa system (Kit T, program G016).  Cells were collected 48 hours after trasfection and total RNA were extracted as discussed in the extract protocol.

tag: treatment

value: SOX11 siRNA

value: SOX11 depletion


title: Z138

description: parental cell

value: parental


title: Z138  SOX11 siRNA

description: SOX11 depletion


title: Granta-519

description: parental cell


title: PCV2 ORF3

value: PCV2 ORF3+


title: Granta-519  SOX11 siRNA

description: SOX11 depletion


title: SDY3_mel_MP2

status: Public on Aug 06 2014

city: Irvine

first: Shu-Dan

last: Yeh

state: CA

address: 321 Steinhaus Hall

department: Ecology and Evolutionary Biology

institute: University of California, Irvine

description:
SDY1_mel_MP1 and SDY3_mel_MP2 are from different total RNA samples
processed data file: Reads_summary.xls, alignments_Dme_mirBase.txt, alignments_Dsi_mirBase.txt, alignments_Dya_mirBase.txt

data_processing:
Sequenced reads were sorted by index sequences, trimmed for adaptor and index sequences, masked for low-quality sequence, then mapped to known Dme, Dsi, and Dya miRNA hairpin sequences (miRBase release15)  using bowtie-0.12.5 with parameters -faS -n 0 -l 99
Read number of 5' and 3' of miRNA hairpin sequene were counted separately
Genome_build: The known miRNA miRNA hairpin sequence of D. melanogaster, D. simulans, and D. yakuba in miRBase release15
Supplementary_files_format_and_content: The read number of 5' and 3' of miRNA for each sample is listed in Reads_summary.xls (i.e. read counts of different miRNAs in small RNA libraries from larva and pupa specimens). The alignments of reads from all libraries to the known miRNA hairpin sequences from miRBase release15 are provided in alignments_Dme_mirBase.txt (aligned to D. melanogaster known miRNAs), alignments_Dsi_mirBase.txt (aligned to D. simulans known miRNAs), and alignments_Dya_mirBase.txt (aligned to D. yakuba known miRNAs).

organism: Drosophila melanogaster

source_name: Whole body

growth_protocol: Flies were grown in standard corn meal medium, constant lighting conditions, and at 25⁰C. Larvae were raised under non-crowded conditions in medium with 0.05% bromophenol blue.  Wandering larvae exhibiting dark blue gut, which corresponds to 18 hours before puparium formation, were collected, rinsed with water, and separated by sex.  For the 0-1 hr white prepuparia, wandering larvae with light blue to white gut were separated by sex, placed in a Petri dish on damped light-wipe tissue until appropriate moment for collection. Samples were snap frozen in liquid nitrogen and stored at -80C until RNA isolation.

extract_protocol:
The total RNAs were extracted and the enriched small RNAs were purified by miRVana miRNA isolation kit (Ambion Inc.)
The four nucleotide indexes: SDY_mel_ML1, ACTG; SDY1_mel_FL1, CTGA; SDY1_mel_MP1, TGAC; SDY1_mel_FP1, GACT; SDY3_mel_ML2, ACTG; SDY3_mel_MP2, TGAC; SDY3_sim_MP1, GACT; SDY3_yak_MP1, CGAT; SDY4_sim_MP2, ACTG; SDY4_yak_MP2, TGAC; SDY4_sim_ML1, GACT; SDY4_yak_ML1, CGAT.  Adaptor-ligated cDNAs were prepared according to Illumina small RNA preparation protocol (Preparing Samples for Analysis of Small RNA Using the Oligo Only Kit, http://www.illumina.com).  Briefly, 16-28nt small RNAs were size selected from a denaturing polyacrylamide gels, 5’ adaptors with four nucleotide indexes at the 3' end and 3’ adaptors were ligated using T4 RNA ligase (Ambion 2140) and the resulting molecules were purified by size selection from denaturing polyacrylamide gels after each ligation reaction.  Four samples with different indexes were pooled for 3’ adaptor ligation and further preparation steps.  The ligated small RNAs were reversed transcribed using Superscript II reverse transcriptase (Invitrogen 18064), subsequently PCR amplified with a Phusion high fidelity PCR DNA polymerase (Finnzymes F-506) through 10 cycles, and purified from denaturing polyacrylamide gels. The 5' adaptor sequence is 5'-GUUCAGAGUUCUACAGUCCGACGAUC-4nt RNA index-3'.  The 3' adaptor sequence is 5'-P-UCGUAUGCCGUCUUCUGCUUGUidT-3'

value: Oregon-R

tag: developmental stage

value: white prepupae

tag: Sex

value: male

value: Whole body


title: NC_rep2


title: SDY3_mel_ML2

description:
SDY1_mel_ML1 and SDY3_mel_ML2 are from different total RNA samples
processed data file: Reads_summary.xls, alignments_Dme_mirBase.txt, alignments_Dsi_mirBase.txt, alignments_Dya_mirBase.txt

value: late third instar larvae (≥18BPF)


title: SDY1_mel_FP1

description: processed data file: Reads_summary.xls, alignments_Dme_mirBase.txt, alignments_Dsi_mirBase.txt, alignments_Dya_mirBase.txt

value: female


title: SDY1_mel_FL1


title: SDY1_mel_MP1


title: SDY1_mel_ML1


title: Granta519-SOX11 Run2