title: DGRP563 F_E3_4_L1

description:
EP6F031
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 4, Library 1


title: DGRP900 F_E3_1_L1

status: Public on Dec 21 2015

type: SRA

city: Bethesda

first: Brian

last: Oliver

state: MD

address: 50 South Drive

department: LBG

country: USA

institute: NIDDK, NIH

description:
EP6F021
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 1, Library 1

library_source: transcriptomic

data_processing:
We performed single-end 76 bp sequencing on the HiSeq2000 Sequencing System (Illumina, San Diego, CA) according to the manufacturer.  De-multiplexed reads (Chastity > 0.6) FASTQ output was from Illumina CASAVA v.1.8.2. Reads were mapped to FlyBase release 5 version 57 (FlyBase file: dmel-all-chromosome-r5.57.fasta) and release 6 version 01 (FlyBase file: dmel-all-chromosome-r6.01.fasta) of the Drosophila melanogaster genome and appended sequence corrected ERCC sequences (ERCC_reference.fa, See Jiang et al., Genome Research, 2011, PMID 21816910) and annotations using TopHat2 (v2.0.10) with parameters  "-g 1 --library-type fr-firststrand" (Kim et al., Genome Biol, 2013, PMID 23618408).  We aligned to Drosophila melanogaster chromosome scaffolds only (release 5 chrU and chrUextra were excluded).  We used a Perl script to convert the dmel-all-r5.57.gff to a GTF file (dme5_57_ERCC.gtf) compatible with TopHat2 and HTSeq (v0.5.4p1) (Anders et al., Bioinformatics, 2015, PMID 25260700).  We extracted features, including pre-miRNAs, pseudogenes, mRNAs, ncRNAs, rRNAs, snoRNAs, snRNAs, tRNAs, genes, CDSs and exons, and changed the 304 features for “miRNA” to “exon”.   We changed the following features: 9 mRNA transcripts without strand assignment were assigned to the parent gene strand; 11 Exons and 9 CDSs without strand assignment were assigned to the parent transcript strand; and 10 CDSs, with ends longer than the parent, were truncated to fit the parent ends.  TopHat2 called Bowtie 2 (v2.1.0) to make indexes. We used SAMtools (v0.1.19) (Li et al., Bioinformatics, 2009, PMID 19505943) to index chromosomes, to sort and merge alignments, and for read statistics.  Mapped reads at the gene-level were counted by HTSeq with parameter "--stranded=reverse -i gene_id -t exon".
Supplementary_files_format_and_content: There are five supplemental files.  The tab-delimited 5_57_HTSeq_raw_read_counts.txt and 6_01_HTSeq_raw_read_counts.txt files contain the gene-level output, for each library, for genome releases 5.57 and 6.01 respectively. Column 1 and 2 are FlyBase FBgn#s and gene symbols, or ERCC  identifiers as applicable.  The remaining columns are library names (as GEO GSM#s).  The GEO_run_summary.xls file contains detailed information on each sequencing run and a readme sheet with field definitions.  The dme5_57_ERCC.gtf file contains the annotation for the alignment to release 5.57 plus the ERCC spike-ins.  ERCC_reference.fa is a FASTA file of the sequence corrected ERCCs.

molecule: polyA RNA

organism: Drosophila melanogaster

source_name: Whole body

growth_protocol: We grew and aged Drosophila Genetic Reference Panel (DGRP) inbred lines derived from the Raleigh, NC, USA wild population (Mackay et al., Nature, 2012, PMID 22318601; Huang et al., Genome Res, 2014, PMID 24714809).  We randomly chose the following 16 DGRP lines after excluding 5 lines from the population that were slow-growing: DGRP-93, DGRP-229, DGRP-320, DGRP-352, DGRP-370, DGRP-563, DGRP-630, DGRP-703, DGRP-761, DGRP-787, DGRP-790, DGRP-804, DGRP-812, DGRP-822, DGRP-850, and DGRP-900. We collected 8 virgin male and 8 virgin female flies from the 16 DGRP genotypes in three replicated environments to produce RNA sequence profiles.  We controlled the environmental conditions in the following ways. We seeded the fly cultures with 5 male and 5 female parents.  We reared the progeny in a single incubator on standard Drosophila food (http://flystocks.bio.indiana.edu/Fly_Work/media-recipes/bloomfood.htm) at 25°C, 60% humidity, and a 12:12-hour light:dark  cycle.  We collected and maintained male and female virgins at 20 flies to a same-sex vial for four days prior to RNA extraction to control for social exposure.

extract_protocol:
Single flies frozen on dry ice were placed into each well of Axygen 96 Deep Well Plates (Corning, Corning, NY) pre-loaded with 200µL of 1 mm glass beads (Biospec Products, Bartlesville, OK).  Fly placement in the wells of each plate was randomized within a replicated environment. We isolated total RNA using the RNeasy 96 Plate Kit according to the manufacturer using either vacuum or centrifugation technology (Qiagen, Valencia, CA), with the following modifications. We added 200µl RLT buffer to each well, sealed the plates with Axygen Sealing Mats (Corning, Corning, NY), and homogenized flies at room temperature for 30sec using a fixed-speed Mini Bead Beater (Biospec Products, Bartlesville, OK).  We added 200µl of 70% ethanol to the crude homogenate, mixed by pipetting several times, and transferred the supernatant to RNeasy plates.  We measured total RNA yield using the Quant-iTTM RiboGreen(R) RNA Assay Kit (Invitrogen, Carlsbad, CA) in black FLUORTRAC 600 384-well PS plates (Greiner Bio-One, Inc., Longwood, FL) using a Gemini EM Fluorescence Microplate Reader (Molecular Devices, Sunnyvale, CA).  We used Dynabeads Oligo (dT) 25 (Life Technologies, Carlsbad, CA) to purify polyA RNA according to manufacturer instructions, except that we used 50-200ng of total RNA depending on yield, adjusted the volume to 50µl with distilled H2O, added 10µl of the washed Dynabeads in a 50µl binding buffer slurry, heated the samples at 65°C for 5min, and immediately chilled the samples on ice.  To prepare RNA-Seq stranded libraries we modified an existing protocol (Wang et al., PLoS One, 2011, PMID 22039485).  All steps were done in 96-well plate format. We incubated all reactions in a Tetrad PTC-225 Thermal Cycler (MJ Research, Waltham, MA). To clean up enzymatic reactions and size select at any of several steps below, we used 0.1% w/v carboxyl-modified Sera-Mag Magnetic Speed-beads (MagNA beads, Thermo Fisher Scientific, Waltham, MA) in XP buffer [20% PEG 8000, 2.5 M NaCl, (Sigma Aldrich, St. Louis, MO)] following the protocol in (Rohland et al., Genome Res, 2012, PMID 22267522), except that we incubated samples with beads for 10 min and used 80% ethanol for washing.  The volume of MagNA beads in XP buffer and corresponding concentration of PEG in the solution was 1.6× XP buffer for no size-selection (except where noted) and 1× XP buffer for selecting fragments > 200bp. Unless noted, we left the beads in the sample after each step.  We used 96-well PCR plates (USA Scientific, Ocala, Fl) paired with Alpaqua 96R Ring Magnet Plates (Alpaqua, Beverly, MA) for magnetic bead separation. We measured RNA quantity with Quant-iTTM RiboGreen(R) and DNA with Quant-iTTM PicoGreen(R) (Invitrogen, Carlsbad, CA) in 384-well plates, PS, FLUOROTRAC 600, black (Greiner Bio-One Inc, Longwood, Fl) using a Gemini EM Fluorescence Microplate Reader (Molecular Devices, Sunnyvale, CA) according to manufacturer instructions.  We used Agilent Bioanalyzer RNA chips and High Sensitivity DNA chips on the 2100 Bioanalyzer system (Agilent, Santa Clara, CA) according to manufacturer instructions and visually inspected electrophoregrams for RNA degradation, library size (DNA), and adapter dimer contamination (DNA).
We fragmented polyA RNA bound to Dynabeads at 94°C for 8min in 16µl of 1.25× first strand MMuLV RT buffer (New England Biolabs, Beverly, MA), with 100ng random primers (Invitrogen, Carlsbad, CA), and 10pg ERCC spike-in controls (Jiang et al., Genome Res, 2011, PMID 21816910) from pools 78A and 78B (Zook et al., PLoS ONE, 2012, PMID 22859977) obtained from Marc Salit (National Institute of Standards and Technology, Gaithersburg MD).  We chilled the samples immediately on ice for 2min and eluted from the beads.  We transferred 15µl of the eluate to a fresh 96-well PCR plate. We added 5µl of the first strand synthesis mixture [0.3mM dNTPs, 5mM DTT, and 10U M-MuLV RT (New England Biolabs, Beverly, MA), and 0.5U SuperRase-In (Life Technologies, Carlsbad, CA)] to the fragmented RNA in the fragmentation buffer and performed a reverse transcription reaction. We bound RNA/cDNA hybrid with 32µl MagNA bead XP buffer slurry, washed, and eluted samples in 16µl of distilled H2O.  We then performed a second strand synthesis with dUTP by adding 5µl of 1× NEB buffer2 (New England Biolabs, Beverly, MA), with 1mM each of dATP, dCTP, dGTP and 2mM dUTP (Thermo Fisher Scientific, Waltham, MA), 10U DNA PolI, 2.5U RNAseH, and 2.5mM DTT (New England Biolabs, Beverly, MA) and incubated at 16°C for 5 hours.  We rebound, washed, and eluted as above. We repaired ends by adding 4µl of NEBNext End Repair Module (New England Biolabs, Beverly, MA) to the eluate following manufacturer instructions.  We then rebound samples to MagNA beads, washed, and eluted as above. Next we performed dA-tailing by adding 4µl of 1× Blue Buffer, with 1U Klenow 3’-5’ exo- (Enzymatics, Beverly, MA) and 1mM dATP, to the eluate and incubated at 37°C for 30min.  We then rebound samples to MagNA beads and washed as above, eluted with 21µl distilled H2O, and transferred 10µl of cDNA to each of two fresh plates. One plate was used in the following steps and one plate was frozen as a back-up.  We ligated RNA Adapter Indexes (Illumina, San Diego, CA) to dsDNA by adding 1µl of an adapter to each 10µl sample and 13µl of 1× Rapid Ligation Buffer with 30U T4 DNA Ligase (Enzymatics, Beverly, MA), and incubated at 25°C for 10min. We stopped reactions with a final concentration of 0.01M EDTA. We added 25µl of MagNA beads in XP buffer (final PEG = 13.6%), bound cDNA to the beads, washed and eluted in 30µl of distilled H2O as above.  We size-selected libraries by adding 1× XP buffer (30µl), washed, eluted samples with 24µl distilled H2O, and transferred 23µl of cDNA to a fresh plate. 11.5µl of the eluate was transferred to another plate and used in the next step; the remaining samples were frozen as a back-up.  We mixed dsDNA product with 2.5U (0.5µl) of Uracil DNA Glycosylase (New England Biolabs, Beverly, MA) and 3µl of PCR Primer Cocktail (Illumina, San Diego, CA) and incubated at 37°C for 30min to digest the second strand DNA.  We added 15µl 2× KAPA HiFi HotStart ReadyMix (Kapa Biosystems, Woburn, MA) directly to the UDG digested DNA mixture and performed a PCR amplification with the following programmed cycle: 95°C for 2min, followed by 12 cycles of 98°C for 20sec, 65°C for 30sec, and 72°C for 30sec; then 72°C for 5min. We purified the product by adding 30µl MagNA beads in 1× XP buffer, eluted in 30µl distilled H2O and transferred 29µl of cDNA library to a fresh plate as described above. To assay plate-level failure, we took 11 samples from each 96-well plate and examined electropherograms for a strong signal in the 300-350 bp library target size and weak signal in the 100-150bp range (primer dimer products).  Each 96-well plate was composed of 4 sets of samples with 24 unique indexes. We pooled equal amounts (5-15 ng) of each library into pools for multiplex sequencing.  All multiplexed libraries were again quantified and checked for quality as above.  Excess library pools were frozen for re-sequencing if required.

tag: strain

tag: developmental stage

value: Adult

tag: Sex

value: Female

tag: tissue

value: Whole body


title: DGRP352 M_E3_5_L1

description:
EP6E111
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 5, Library 1

value: Male


title: DGRP787 F_E3_7_L1

description:
EP6F121
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 7, Library 1


title: DGRP229 F_E3_1_L1

description:
EP6E051
Drosophila Genetic Reference Panel 229, Female, Environment 3, Fly 1, Library 1


title: DGRP790 F_E3_1_L2

description:
EP6E022
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 1, Library 2


title: DGRP900 M_E3_5_L2

description:
EP6D072
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 5, Library 2


title: DGRP229 M_E3_6_L2

description:
EP6E042
Drosophila Genetic Reference Panel 229, Male, Environment 3, Fly 6, Library 2


title: DGRP790 F_E3_8_L2

description:
EP6E012
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 8, Library 2


title: DGRP761 M_E3_2_L2

description:
EP6D122
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 2, Library 2


title: DGRP93 F_E3_1_L1

description:
EP6D051
Drosophila Genetic Reference Panel 93, Female, Environment 3, Fly 1, Library 1


title: DGRP900 M_E3_2_L2

description:
EP6D062
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 2, Library 2


title: DGRP804 M_E3_3_L2

description:
EP6C112
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 3, Library 2


title: DGRP812 F_E3_7_L1

description:
EP6D011
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 7, Library 1


title: DGRP761 M_E3_1_L2

description:
EP6D112
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 1, Library 2


title: DGRP320 F_E3_4_L1

description:
EP6C121
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 4, Library 1


title: DGRP804 F_E3_1_L1

description:
EP6D021
Drosophila Genetic Reference Panel 804, Female, Environment 3, Fly 1, Library 1


title: DGRP352 M_E3_1_L2

description:
EP6C102
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 1, Library 2


title: DGRP320 F_E2_3_L1

description:
EP6C081
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 3, Library 1


title: DGRP352 F_E3_6_L1

description:
EP6E081
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 6, Library 1


title: DGRP812 F_E2_1_L2

description:
EP6C072
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 1, Library 2


title: DGRP790 F_E2_6_L1

description:
EP6C061
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 6, Library 1


title: DGRP787 F_E2_2_L1

description:
EP6C011
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 2, Library 1


title: DGRP93 F_E2_1_L2

description:
EP6B102
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 1, Library 2


title: DGRP630 F_E2_7_L1

description:
EP6B091
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 7, Library 1


title: DGRP563 F_E2_5_L2

description:
EP6B082
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 5, Library 2


title: DGRP812 M_E2_3_L2

description:
EP6A122
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 3, Library 2


title: DGRP900 M_E2_6_L1

description:
EP6A091
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 6, Library 1


title: DGRP790 M_E2_1_L2

description:
EP6B012
Drosophila Genetic Reference Panel 790, Male, Environment 2, Fly 1, Library 2


title: DGRP370 M_E2_2_L1

description:
EP6A101
Drosophila Genetic Reference Panel 370, Male, Environment 2, Fly 2, Library 1


title: DGRP320 F_E2_2_L1

description:
EP6A111
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 2, Library 1


title: DGRP761 M_E2_3_L2

description:
EP6A082
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 3, Library 2


title: DGRP787 F_E2_1_L1

description:
EP5H101
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 1, Library 1


title: DGRP320 M_E2_6_L1

description:
EP6A021
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 6, Library 1


title: DGRP703 F_E2_5_L1

description:
EP5F081
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 5, Library 1


title: DGRP93 F_E2_3_L1

description:
EP5G111
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 3, Library 1


title: DGRP787 F_E2_4_L1

description:
EP5H041
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 4, Library 1


title: DGRP630 F_E2_5_L1

description:
EP6A071
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 5, Library 1


title: DGRP703 M_E2_1_L2

description:
EP6A062
Drosophila Genetic Reference Panel 703, Male, Environment 2, Fly 1, Library 2


title: DGRP804 F_E2_2_L1

description:
EP5G071
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 2, Library 1


title: DGRP320 M_E2_8_L2

description:
EP6B112
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 8, Library 2


title: DGRP229 F_E2_6_L1

description:
EP5F121
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 6, Library 1


title: DGRP563 F_E2_7_L2

description:
EP5H052
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 7, Library 2


title: DGRP822 F_E2_8_L1

description:
EP5H071
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 8, Library 1


title: DGRP804 F_E2_1_L1

description:
EP5H091
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 1, Library 1


title: DGRP850 F_E2_3_L1

description:
EP5F051
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 3, Library 1


title: DGRP900 F_E2_6_L2

description:
EP5F072
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 6, Library 2


title: DGRP812 F_E2_2_L1

description:
EP5E121
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 2, Library 1


title: DGRP812 M_E2_8_L1

description:
EP5E061
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 8, Library 1


title: DGRP790 F_E2_5_L1

description:
EP5E091
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 5, Library 1


title: DGRP320 F_E2_4_L1

description:
EP5E041
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 4, Library 1


title: DGRP761 F_E2_7_L1

description:
EP6A011
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 7, Library 1


title: DGRP370 F_E2_7_L1

description:
EP5G011
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 7, Library 1


title: DGRP93 F_E2_5_L1

description:
EP5D091
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 5, Library 1


title: DGRP370 F_E2_1_L1

description:
EP5D061
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 1, Library 1


title: DGRP822 M_E2_2_L3

description:
EP5D053
Drosophila Genetic Reference Panel 822, Male, Environment 2, Fly 2, Library 3


title: DGRP630 M_E2_2_L2

description:
EP5C082
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 2, Library 2


title: DGRP563 F_E2_1_L1

description:
EP5C101
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 1, Library 1


title: DGRP822 F_E2_6_L1

description:
EP5C061
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 6, Library 1


title: DGRP804 F_E2_7_L1

description:
EP5C051
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 7, Library 1


title: DGRP850 M_E2_3_L2

description:
EP5B062
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 3, Library 2


title: DGRP900 M_E2_3_L2

description:
EP5B082
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 3, Library 2


title: DGRP850 F_E2_5_L1

description:
EP5B071
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 5, Library 1


title: DGRP761 F_E2_3_L1

description:
EP5B021
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 3, Library 1


title: DGRP850 F_E2_4_L1

description:
EP5B011
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 4, Library 1


title: DGRP812 F_E2_5_L1

description:
EP5B051
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 5, Library 1


title: DGRP630 M_E2_7_L1

description:
EP5A061
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 7, Library 1


title: DGRP787 M_E2_2_L2

description:
EP5A092
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 2, Library 2


title: DGRP787 F_E2_8_L1

description:
EP5A031
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 8, Library 1


title: DGRP370 F_E2_8_L1

description:
EP5B031
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 8, Library 1


title: DGRP804 M_E2_5_L1

description:
EP6C051
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 5, Library 1


title: DGRP370 F_E2_6_L2

description:
EP5A042
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 6, Library 2


title: DGRP812 F_E2_6_L1

description:
EP5B041
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 6, Library 1


title: DGRP563 F_E2_2_L1

description:
EP5E021
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 2, Library 1


title: DGRP787 M_E2_4_L2

description:
EP5A122
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 4, Library 2


title: DGRP352 M_E2_3_L1

description:
EP5A021
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 3, Library 1


title: DGRP812 M_E1_4_L1

description:
EP2B121
Drosophila Genetic Reference Panel 812, Male, Environment 1, Fly 4, Library 1


title: DGRP900 F_E2_4_L1

description:
EP5D041
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 4, Library 1


title: DGRP850 M_E1_4_L2

description:
EP1G082
Drosophila Genetic Reference Panel 850, Male, Environment 1, Fly 4, Library 2


title: DGRP352 M_E1_4_L1

description:
EP2A061
Drosophila Genetic Reference Panel 352, Male, Environment 1, Fly 4, Library 1


title: DGRP320 F_E1_3_L1

description:
EP1H121
Drosophila Genetic Reference Panel 320, Female, Environment 1, Fly 3, Library 1


title: DGRP850 M_E1_5_L1

description:
EP1A111
Drosophila Genetic Reference Panel 850, Male, Environment 1, Fly 5, Library 1


title: DGRP320 F_E1_8_L1

description:
EP1C121
Drosophila Genetic Reference Panel 320, Female, Environment 1, Fly 8, Library 1


title: DGRP630 M_E1_2_L1

description:
EP1G071
Drosophila Genetic Reference Panel 630, Male, Environment 1, Fly 2, Library 1


title: DGRP703 F_E3_3_L2

description:
EP8H122
Drosophila Genetic Reference Panel 703, Female, Environment 3, Fly 3, Library 2


title: DGRP850 M_E3_2_L2

description:
EP8H092
Drosophila Genetic Reference Panel 850, Male, Environment 3, Fly 2, Library 2


title: DGRP703 M_E3_5_L2

description:
EP8H102
Drosophila Genetic Reference Panel 703, Male, Environment 3, Fly 5, Library 2


title: DGRP352 F_E3_4_L2

description:
EP8H112
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 4, Library 2


title: DGRP630 M_E3_7_L2

description:
EP8H072
Drosophila Genetic Reference Panel 630, Male, Environment 3, Fly 7, Library 2


title: DGRP320 F_E3_1_L2

description:
EP8H082
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 1, Library 2


title: DGRP630 M_E3_8_L2

description:
EP8H062
Drosophila Genetic Reference Panel 630, Male, Environment 3, Fly 8, Library 2


title: DGRP850 F_E3_2_L2

description:
EP8H052
Drosophila Genetic Reference Panel 850, Female, Environment 3, Fly 2, Library 2


title: DGRP630 M_E3_2_L2

description:
EP8H042
Drosophila Genetic Reference Panel 630, Male, Environment 3, Fly 2, Library 2


title: DGRP804 M_E3_4_L2

description:
EP8H032
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 4, Library 2


title: DGRP93 M_E3_4_L2

description:
EP8H022
Drosophila Genetic Reference Panel 93, Male, Environment 3, Fly 4, Library 2


title: DGRP370 F_E3_3_L2

description:
EP8H012
Drosophila Genetic Reference Panel 370, Female, Environment 3, Fly 3, Library 2


title: DGRP850 M_E3_8_L2

description:
EP8G082
Drosophila Genetic Reference Panel 850, Male, Environment 3, Fly 8, Library 2


title: DGRP320 M_E3_7_L2

description:
EP8G122
Drosophila Genetic Reference Panel 320, Male, Environment 3, Fly 7, Library 2


title: DGRP703 F_E3_5_L2

description:
EP8G092
Drosophila Genetic Reference Panel 703, Female, Environment 3, Fly 5, Library 2


title: DGRP703 M_E3_7_L3

description:
EP8G073
Drosophila Genetic Reference Panel 703, Male, Environment 3, Fly 7, Library 3


title: DGRP812 F_E3_8_L2

description:
EP8G102
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 8, Library 2


title: DGRP790 M_E3_1_L2

description:
EP8G032
Drosophila Genetic Reference Panel 790, Male, Environment 3, Fly 1, Library 2


title: DGRP703 M_E3_8_L2

description:
EP8G022
Drosophila Genetic Reference Panel 703, Male, Environment 3, Fly 8, Library 2


title: DGRP761 F_E3_5_L2

description:
EP8G012
Drosophila Genetic Reference Panel 761, Female, Environment 3, Fly 5, Library 2


title: DGRP630 F_E3_1_L2

description:
EP8G042
Drosophila Genetic Reference Panel 630, Female, Environment 3, Fly 1, Library 2


title: DGRP370 F_E3_8_L2

description:
EP8G112
Drosophila Genetic Reference Panel 370, Female, Environment 3, Fly 8, Library 2


title: DGRP787 M_E3_8_L2

description:
EP8F112
Drosophila Genetic Reference Panel 787, Male, Environment 3, Fly 8, Library 2


title: DGRP563 F_E3_5_L2

description:
EP8G052
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 5, Library 2


title: DGRP787 F_E3_8_L2

description:
EP8F092
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 8, Library 2


title: DGRP850 M_E3_1_L3

description:
EP8F123
Drosophila Genetic Reference Panel 850, Male, Environment 3, Fly 1, Library 3


title: DGRP370 F_E3_6_L2

description:
EP8F102
Drosophila Genetic Reference Panel 370, Female, Environment 3, Fly 6, Library 2


title: DGRP370 M_E3_7_L2

description:
EP8F082
Drosophila Genetic Reference Panel 370, Male, Environment 3, Fly 7, Library 2


title: DGRP761 M_E3_4_L2

description:
EP8F072
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 4, Library 2


title: DGRP320 F_E3_2_L2

description:
EP8F062
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 2, Library 2


title: DGRP93 M_E3_1_L2

description:
EP8F022
Drosophila Genetic Reference Panel 93, Male, Environment 3, Fly 1, Library 2


title: DGRP822 F_E3_4_L2

description:
EP8F052
Drosophila Genetic Reference Panel 822, Female, Environment 3, Fly 4, Library 2


title: DGRP703 M_E3_2_L2

description:
EP8F032
Drosophila Genetic Reference Panel 703, Male, Environment 3, Fly 2, Library 2


title: DGRP812 M_E3_2_L2

description:
EP8F012
Drosophila Genetic Reference Panel 812, Male, Environment 3, Fly 2, Library 2


title: DGRP900 F_E3_8_L2

description:
EP8E122
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 8, Library 2


title: DGRP761 F_E3_6_L2

description:
EP8F042
Drosophila Genetic Reference Panel 761, Female, Environment 3, Fly 6, Library 2


title: DGRP320 M_E3_3_L2

description:
EP8E112
Drosophila Genetic Reference Panel 320, Male, Environment 3, Fly 3, Library 2


title: DGRP761 F_E3_4_L3

description:
EP8E103
Drosophila Genetic Reference Panel 761, Female, Environment 3, Fly 4, Library 3


title: DGRP630 M_E3_5_L2

description:
EP8E072
Drosophila Genetic Reference Panel 630, Male, Environment 3, Fly 5, Library 2


title: DGRP352 F_E3_1_L2

description:
EP8E092
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 1, Library 2


title: DGRP790 M_E3_7_L3

description:
EP8E063
Drosophila Genetic Reference Panel 790, Male, Environment 3, Fly 7, Library 3


title: DGRP900 F_E3_2_L2

description:
EP8D112
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 2, Library 2


title: DGRP93 M_E3_7_L2

description:
EP8E032
Drosophila Genetic Reference Panel 93, Male, Environment 3, Fly 7, Library 2


title: DGRP352 F_E3_5_L2

description:
EP8E022
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 5, Library 2


title: DGRP812 F_E3_5_L2

description:
EP8E012
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 5, Library 2


title: DGRP790 M_E3_6_L2

description:
EP8D032
Drosophila Genetic Reference Panel 790, Male, Environment 3, Fly 6, Library 2


title: DGRP229 M_E3_2_L2

description:
EP8C122
Drosophila Genetic Reference Panel 229, Male, Environment 3, Fly 2, Library 2


title: DGRP370 F_E3_4_L2

description:
EP8D012
Drosophila Genetic Reference Panel 370, Female, Environment 3, Fly 4, Library 2


title: DGRP850 M_E3_6_L2

description:
EP8E082
Drosophila Genetic Reference Panel 850, Male, Environment 3, Fly 6, Library 2


title: DGRP850 F_E3_4_L2

description:
EP8E042
Drosophila Genetic Reference Panel 850, Female, Environment 3, Fly 4, Library 2


title: DGRP352 F_E3_7_L2

description:
EP8C092
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 7, Library 2


title: DGRP370 F_E3_1_L2

description:
EP8C102
Drosophila Genetic Reference Panel 370, Female, Environment 3, Fly 1, Library 2


title: DGRP900 F_E3_4_L2

description:
EP8C082
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 4, Library 2


title: DGRP370 F_E3_2_L2

description:
EP8E052
Drosophila Genetic Reference Panel 370, Female, Environment 3, Fly 2, Library 2


title: DGRP630 F_E3_2_L2

description:
EP8D052
Drosophila Genetic Reference Panel 630, Female, Environment 3, Fly 2, Library 2


title: DGRP790 F_E3_3_L2

description:
EP8D072
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 3, Library 2


title: DGRP850 F_E3_7_L2

description:
EP8D062
Drosophila Genetic Reference Panel 850, Female, Environment 3, Fly 7, Library 2


title: DGRP900 F_E3_7_L2

description:
EP8D092
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 7, Library 2


title: DGRP822 M_E3_2_L2

description:
EP8C112
Drosophila Genetic Reference Panel 822, Male, Environment 3, Fly 2, Library 2


title: DGRP812 F_E3_2_L2

description:
EP8C052
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 2, Library 2


title: DGRP320 M_E3_6_L2

description:
EP8D042
Drosophila Genetic Reference Panel 320, Male, Environment 3, Fly 6, Library 2


title: DGRP850 F_E3_6_L2

description:
EP8C062
Drosophila Genetic Reference Panel 850, Female, Environment 3, Fly 6, Library 2


title: DGRP787 M_E3_7_L2

description:
EP8D102
Drosophila Genetic Reference Panel 787, Male, Environment 3, Fly 7, Library 2


title: DGRP790 M_E3_8_L2

description:
EP8C042
Drosophila Genetic Reference Panel 790, Male, Environment 3, Fly 8, Library 2


title: DGRP804 F_E3_7_L3

description:
EP8D123
Drosophila Genetic Reference Panel 804, Female, Environment 3, Fly 7, Library 3


title: DGRP320 F_E3_3_L2

description:
EP8D022
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 3, Library 2


title: DGRP703 M_E3_4_L2

description:
EP8C012
Drosophila Genetic Reference Panel 703, Male, Environment 3, Fly 4, Library 2


title: DGRP703 F_E3_7_L2

description:
EP8B102
Drosophila Genetic Reference Panel 703, Female, Environment 3, Fly 7, Library 2


title: DGRP630 M_E3_3_L2

description:
EP8B122
Drosophila Genetic Reference Panel 630, Male, Environment 3, Fly 3, Library 2


title: DGRP822 M_E3_4_L3

description:
EP8B113
Drosophila Genetic Reference Panel 822, Male, Environment 3, Fly 4, Library 3


title: DGRP787 M_E3_1_L2

description:
EP8B092
Drosophila Genetic Reference Panel 787, Male, Environment 3, Fly 1, Library 2


title: DGRP370 M_E3_8_L2

description:
EP8B082
Drosophila Genetic Reference Panel 370, Male, Environment 3, Fly 8, Library 2


title: DGRP352 M_E3_7_L2

description:
EP8B072
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 7, Library 2


title: DGRP352 F_E3_8_L2

description:
EP8C072
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 8, Library 2


title: DGRP900 F_E3_6_L2

description:
EP8B062
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 6, Library 2


title: DGRP822 F_E3_8_L2

description:
EP8A122
Drosophila Genetic Reference Panel 822, Female, Environment 3, Fly 8, Library 2


title: DGRP320 M_E3_2_L2

description:
EP8B042
Drosophila Genetic Reference Panel 320, Male, Environment 3, Fly 2, Library 2


title: DGRP352 M_E3_2_L2

description:
EP8B052
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 2, Library 2


title: DGRP790 F_E3_4_L3

description:
EP8A093
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 4, Library 3


title: DGRP787 M_E3_5_L2

description:
EP8A072
Drosophila Genetic Reference Panel 787, Male, Environment 3, Fly 5, Library 2


title: DGRP229 M_E3_1_L2

description:
EP8A062
Drosophila Genetic Reference Panel 229, Male, Environment 3, Fly 1, Library 2


title: DGRP787 M_E3_3_L2

description:
EP7H112
Drosophila Genetic Reference Panel 787, Male, Environment 3, Fly 3, Library 2


title: DGRP93 M_E3_5_L2

description:
EP7H092
Drosophila Genetic Reference Panel 93, Male, Environment 3, Fly 5, Library 2


title: DGRP850 M_E3_5_L2

description:
EP8A022
Drosophila Genetic Reference Panel 850, Male, Environment 3, Fly 5, Library 2


title: DGRP850 F_E3_5_L2

description:
EP7H062
Drosophila Genetic Reference Panel 850, Female, Environment 3, Fly 5, Library 2


title: DGRP790 F_E3_5_L2

description:
EP8C022
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 5, Library 2


title: DGRP790 F_E3_7_L2

description:
EP7H052
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 7, Library 2


title: DGRP822 M_E3_7_L2

description:
EP8A042
Drosophila Genetic Reference Panel 822, Male, Environment 3, Fly 7, Library 2


title: DGRP229 M_E3_7_L2

description:
EP7H122
Drosophila Genetic Reference Panel 229, Male, Environment 3, Fly 7, Library 2


title: DGRP804 M_E3_8_L2

description:
EP7H072
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 8, Library 2


title: DGRP900 M_E3_8_L2

description:
EP7H032
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 8, Library 2


title: DGRP370 M_E3_5_L2

description:
EP7H102
Drosophila Genetic Reference Panel 370, Male, Environment 3, Fly 5, Library 2


title: DGRP229 F_E3_7_L2

description:
EP8A052
Drosophila Genetic Reference Panel 229, Female, Environment 3, Fly 7, Library 2


title: DGRP787 M_E3_2_L2

description:
EP7H042
Drosophila Genetic Reference Panel 787, Male, Environment 3, Fly 2, Library 2


title: DGRP790 M_E3_5_L2

description:
EP7H082
Drosophila Genetic Reference Panel 790, Male, Environment 3, Fly 5, Library 2


title: DGRP822 F_E3_2_L2

description:
EP7G122
Drosophila Genetic Reference Panel 822, Female, Environment 3, Fly 2, Library 2


title: DGRP761 F_E3_2_L2

description:
EP8B012
Drosophila Genetic Reference Panel 761, Female, Environment 3, Fly 2, Library 2


title: DGRP352 M_E3_8_L2

description:
EP8B022
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 8, Library 2


title: DGRP812 F_E3_4_L2

description:
EP8B032
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 4, Library 2


title: DGRP900 F_E3_5_L2

description:
EP7G112
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 5, Library 2


title: DGRP850 F_E3_8_L3

description:
EP7G073
Drosophila Genetic Reference Panel 850, Female, Environment 3, Fly 8, Library 3


title: DGRP630 F_E3_3_L2

description:
EP7G062
Drosophila Genetic Reference Panel 630, Female, Environment 3, Fly 3, Library 2


title: DGRP812 M_E3_6_L2

description:
EP7H012
Drosophila Genetic Reference Panel 812, Male, Environment 3, Fly 6, Library 2


title: DGRP822 F_E3_6_L2

description:
EP7G042
Drosophila Genetic Reference Panel 822, Female, Environment 3, Fly 6, Library 2


title: DGRP850 M_E3_3_L2

description:
EP7G082
Drosophila Genetic Reference Panel 850, Male, Environment 3, Fly 3, Library 2


title: DGRP93 M_E3_3_L2

description:
EP7G102
Drosophila Genetic Reference Panel 93, Male, Environment 3, Fly 3, Library 2


title: DGRP352 M_E3_6_L2

description:
EP7G022
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 6, Library 2


title: DGRP822 F_E3_7_L2

description:
EP7G092
Drosophila Genetic Reference Panel 822, Female, Environment 3, Fly 7, Library 2


title: DGRP703 F_E3_6_L2

description:
EP7G012
Drosophila Genetic Reference Panel 703, Female, Environment 3, Fly 6, Library 2


title: DGRP822 F_E3_1_L2

description:
EP7F092
Drosophila Genetic Reference Panel 822, Female, Environment 3, Fly 1, Library 2


title: DGRP812 M_E3_4_L2

description:
EP7F102
Drosophila Genetic Reference Panel 812, Male, Environment 3, Fly 4, Library 2


title: DGRP812 F_E3_1_L2

description:
EP7F072
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 1, Library 2


title: DGRP761 M_E3_5_L2

description:
EP7F082
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 5, Library 2


title: DGRP761 F_E3_7_L2

description:
EP7F062
Drosophila Genetic Reference Panel 761, Female, Environment 3, Fly 7, Library 2


title: DGRP320 F_E3_6_L2

description:
EP7F022
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 6, Library 2


title: DGRP812 F_E3_6_L2

description:
EP7F042
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 6, Library 2


title: DGRP320 F_E3_7_L2

description:
EP7F052
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 7, Library 2


title: DGRP812 F_E3_3_L2

description:
EP7E122
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 3, Library 2


title: DGRP804 M_E3_1_L2

description:
EP7E082
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 1, Library 2


title: DGRP703 M_E3_6_L3

description:
EP7E073
Drosophila Genetic Reference Panel 703, Male, Environment 3, Fly 6, Library 3


title: DGRP804 M_E3_6_L2

description:
EP7E112
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 6, Library 2


title: DGRP229 M_E3_3_L2

description:
EP7F012
Drosophila Genetic Reference Panel 229, Male, Environment 3, Fly 3, Library 2


title: DGRP630 F_E3_6_L2

description:
EP7G052
Drosophila Genetic Reference Panel 630, Female, Environment 3, Fly 6, Library 2


title: DGRP822 M_E3_5_L2

description:
EP7E052
Drosophila Genetic Reference Panel 822, Male, Environment 3, Fly 5, Library 2


title: DGRP352 F_E3_3_L2

description:
EP7E092
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 3, Library 2


title: DGRP229 F_E3_8_L2

description:
EP7E102
Drosophila Genetic Reference Panel 229, Female, Environment 3, Fly 8, Library 2


title: DGRP352 M_E3_3_L2

description:
EP7E062
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 3, Library 2


title: DGRP352 F_E3_2_L2

description:
EP7F112
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 2, Library 2


title: DGRP787 F_E3_4_L2

description:
EP7E042
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 4, Library 2


title: DGRP229 F_E3_6_L2

description:
EP7E032
Drosophila Genetic Reference Panel 229, Female, Environment 3, Fly 6, Library 2


title: DGRP320 M_E3_4_L2

description:
EP7E012
Drosophila Genetic Reference Panel 320, Male, Environment 3, Fly 4, Library 2


title: DGRP787 F_E3_1_L2

description:
EP7E022
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 1, Library 2


title: DGRP812 M_E3_1_L2

description:
EP7D102
Drosophila Genetic Reference Panel 812, Male, Environment 3, Fly 1, Library 2


title: DGRP703 F_E3_8_L2

description:
EP7D072
Drosophila Genetic Reference Panel 703, Female, Environment 3, Fly 8, Library 2


title: DGRP630 F_E3_4_L2

description:
EP7D122
Drosophila Genetic Reference Panel 630, Female, Environment 3, Fly 4, Library 2


title: DGRP563 F_E3_1_L2

description:
EP7D112
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 1, Library 2


title: DGRP804 M_E3_2_L2

description:
EP7D062
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 2, Library 2


title: DGRP900 M_E3_3_L2

description:
EP7D042
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 3, Library 2


title: DGRP822 M_E3_6_L2

description:
EP7D052
Drosophila Genetic Reference Panel 822, Male, Environment 3, Fly 6, Library 2


title: DGRP822 M_E3_8_L2

description:
EP7D022
Drosophila Genetic Reference Panel 822, Male, Environment 3, Fly 8, Library 2


title: DGRP93 M_E3_2_L2

description:
EP7D012
Drosophila Genetic Reference Panel 93, Male, Environment 3, Fly 2, Library 2


title: DGRP320 M_E3_5_L3

description:
EP7D033
Drosophila Genetic Reference Panel 320, Male, Environment 3, Fly 5, Library 3


title: DGRP900 M_E3_4_L2

description:
EP7C072
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 4, Library 2


title: DGRP804 M_E3_5_L2

description:
EP7C102
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 5, Library 2


title: DGRP761 M_E3_7_L2

description:
EP7C012
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 7, Library 2


title: DGRP812 M_E3_5_L2

description:
EP7D092
Drosophila Genetic Reference Panel 812, Male, Environment 3, Fly 5, Library 2


title: DGRP563 M_E3_2_L3

description:
EP7C123
Drosophila Genetic Reference Panel 563, Male, Environment 3, Fly 2, Library 3


title: DGRP787 F_E3_2_L2

description:
EP7C022
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 2, Library 2


title: DGRP787 F_E3_3_L2

description:
EP7C032
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 3, Library 2


title: DGRP93 F_E3_3_L2

description:
EP7C082
Drosophila Genetic Reference Panel 93, Female, Environment 3, Fly 3, Library 2


title: DGRP790 F_E3_2_L2

description:
EP7C052
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 2, Library 2


title: DGRP563 F_E3_3_L2

description:
EP7C112
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 3, Library 2


title: DGRP804 F_E3_2_L2

description:
EP7C062
Drosophila Genetic Reference Panel 804, Female, Environment 3, Fly 2, Library 2


title: DGRP822 F_E3_3_L2

description:
EP7C092
Drosophila Genetic Reference Panel 822, Female, Environment 3, Fly 3, Library 2


title: DGRP850 F_E3_3_L2

description:
EP7B102
Drosophila Genetic Reference Panel 850, Female, Environment 3, Fly 3, Library 2


title: DGRP563 F_E3_6_L2

description:
EP7B082
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 6, Library 2


title: DGRP761 F_E3_8_L2

description:
EP7B112
Drosophila Genetic Reference Panel 761, Female, Environment 3, Fly 8, Library 2


title: DGRP93 F_E3_6_L2

description:
EP7B012
Drosophila Genetic Reference Panel 93, Female, Environment 3, Fly 6, Library 2


title: DGRP320 F_E3_8_L2

description:
EP7B042
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 8, Library 2


title: DGRP563 F_E3_8_L2

description:
EP7B032
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 8, Library 2


title: DGRP822 F_E3_5_L2

description:
EP7A102
Drosophila Genetic Reference Panel 822, Female, Environment 3, Fly 5, Library 2


title: DGRP630 M_E3_4_L2

description:
EP7B122
Drosophila Genetic Reference Panel 630, Male, Environment 3, Fly 4, Library 2


title: DGRP900 M_E3_1_L2

description:
EP7A112
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 1, Library 2


title: DGRP320 F_E3_5_L2

description:
EP7B022
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 5, Library 2


title: DGRP822 M_E3_1_L2

description:
EP7A082
Drosophila Genetic Reference Panel 822, Male, Environment 3, Fly 1, Library 2


title: DGRP703 F_E3_4_L2

description:
EP7A092
Drosophila Genetic Reference Panel 703, Female, Environment 3, Fly 4, Library 2


title: DGRP812 M_E3_7_L2

description:
EP7C042
Drosophila Genetic Reference Panel 812, Male, Environment 3, Fly 7, Library 2


title: DGRP850 F_E3_1_L2

description:
EP7A072
Drosophila Genetic Reference Panel 850, Female, Environment 3, Fly 1, Library 2


title: DGRP630 F_E3_8_L2

description:
EP7B072
Drosophila Genetic Reference Panel 630, Female, Environment 3, Fly 8, Library 2


title: DGRP787 F_E3_5_L2

description:
EP7A052
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 5, Library 2


title: DGRP850 M_E3_4_L2

description:
EP7B062
Drosophila Genetic Reference Panel 850, Male, Environment 3, Fly 4, Library 2


title: DGRP804 F_E3_5_L2

description:
EP6H072
Drosophila Genetic Reference Panel 804, Female, Environment 3, Fly 5, Library 2


title: DGRP320 M_E3_8_L2

description:
EP7B052
Drosophila Genetic Reference Panel 320, Male, Environment 3, Fly 8, Library 2


title: DGRP229 M_E3_5_L3

description:
EP7A033
Drosophila Genetic Reference Panel 229, Male, Environment 3, Fly 5, Library 3


title: DGRP229 F_E3_2_L2

description:
EP6H112
Drosophila Genetic Reference Panel 229, Female, Environment 3, Fly 2, Library 2


title: DGRP93 F_E3_5_L2

description:
EP6H102
Drosophila Genetic Reference Panel 93, Female, Environment 3, Fly 5, Library 2


title: DGRP761 F_E3_3_L3

description:
EP6H123
Drosophila Genetic Reference Panel 761, Female, Environment 3, Fly 3, Library 3


title: DGRP563 F_E3_2_L3

description:
EP6H063
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 2, Library 3


title: DGRP370 F_E3_5_L2

description:
EP6H042
Drosophila Genetic Reference Panel 370, Female, Environment 3, Fly 5, Library 2


title: DGRP822 M_E3_3_L1

description:
EP6H051
Drosophila Genetic Reference Panel 822, Male, Environment 3, Fly 3, Library 1


title: DGRP812 M_E3_3_L2

description:
EP6H082
Drosophila Genetic Reference Panel 812, Male, Environment 3, Fly 3, Library 2


title: DGRP630 M_E3_1_L1

description:
EP6H021
Drosophila Genetic Reference Panel 630, Male, Environment 3, Fly 1, Library 1


title: DGRP370 M_E3_2_L1

description:
EP6H011
Drosophila Genetic Reference Panel 370, Male, Environment 3, Fly 2, Library 1


title: DGRP761 M_E3_8_L1

description:
EP6H031
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 8, Library 1


title: DGRP804 F_E3_3_L2

description:
EP6G122
Drosophila Genetic Reference Panel 804, Female, Environment 3, Fly 3, Library 2


title: DGRP761 M_E3_3_L2

description:
EP7A062
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 3, Library 2


title: DGRP787 F_E3_6_L2

description:
EP6G112
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 6, Library 2


title: DGRP630 M_E3_6_L1

description:
EP6G081
Drosophila Genetic Reference Panel 630, Male, Environment 3, Fly 6, Library 1


title: DGRP804 F_E3_8_L2

description:
EP6G102
Drosophila Genetic Reference Panel 804, Female, Environment 3, Fly 8, Library 2


title: DGRP93 F_E3_8_L2

description:
EP7A042
Drosophila Genetic Reference Panel 93, Female, Environment 3, Fly 8, Library 2


title: DGRP790 M_E3_3_L3

description:
EP6G073
Drosophila Genetic Reference Panel 790, Male, Environment 3, Fly 3, Library 3


title: DGRP370 M_E3_6_L1

description:
EP6G051
Drosophila Genetic Reference Panel 370, Male, Environment 3, Fly 6, Library 1


title: DGRP790 M_E3_2_L1

description:
EP6G061
Drosophila Genetic Reference Panel 790, Male, Environment 3, Fly 2, Library 1


title: DGRP93 M_E3_8_L1

description:
EP6G031
Drosophila Genetic Reference Panel 93, Male, Environment 3, Fly 8, Library 1


title: DGRP93 F_E3_2_L2

description:
EP6G042
Drosophila Genetic Reference Panel 93, Female, Environment 3, Fly 2, Library 2


title: DGRP850 M_E3_7_L1

description:
EP6G011
Drosophila Genetic Reference Panel 850, Male, Environment 3, Fly 7, Library 1


title: DGRP370 F_E3_7_L2

description:
EP6G022
Drosophila Genetic Reference Panel 370, Female, Environment 3, Fly 7, Library 2


title: DGRP787 F_E3_7_L2

description:
EP6F122
Drosophila Genetic Reference Panel 787, Female, Environment 3, Fly 7, Library 2


title: DGRP787 M_E3_4_L1

description:
EP6F071
Drosophila Genetic Reference Panel 787, Male, Environment 3, Fly 4, Library 1


title: DGRP703 M_E3_1_L1

description:
EP6F081
Drosophila Genetic Reference Panel 703, Male, Environment 3, Fly 1, Library 1


title: DGRP563 F_E3_7_L2

description:
EP6F062
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 7, Library 2


title: DGRP900 F_E3_3_L2

description:
EP6F052
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 3, Library 2


title: DGRP352 M_E3_4_L1

description:
EP6F111
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 4, Library 1


title: DGRP93 F_E3_7_L2

description:
EP6G092
Drosophila Genetic Reference Panel 93, Female, Environment 3, Fly 7, Library 2


title: DGRP229 F_E3_5_L2

description:
EP6F012
Drosophila Genetic Reference Panel 229, Female, Environment 3, Fly 5, Library 2


title: DGRP804 M_E3_7_L1

description:
EP6F041
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 7, Library 1


title: DGRP563 F_E3_4_L2

description:
EP6F032
Drosophila Genetic Reference Panel 563, Female, Environment 3, Fly 4, Library 2


title: DGRP790 M_E3_4_L1

description:
EP6E091
Drosophila Genetic Reference Panel 790, Male, Environment 3, Fly 4, Library 1


title: DGRP320 M_E3_1_L1

description:
EP6E101
Drosophila Genetic Reference Panel 320, Male, Environment 3, Fly 1, Library 1


title: DGRP352 F_E3_6_L2

description:
EP6E082
Drosophila Genetic Reference Panel 352, Female, Environment 3, Fly 6, Library 2


title: DGRP352 M_E3_5_L2

description:
EP6E112
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 5, Library 2


title: DGRP703 F_E3_1_L2

description:
EP6F102
Drosophila Genetic Reference Panel 703, Female, Environment 3, Fly 1, Library 2


title: DGRP229 M_E3_4_L1

description:
EP6E071
Drosophila Genetic Reference Panel 229, Male, Environment 3, Fly 4, Library 1


title: DGRP630 F_E3_5_L2

description:
EP6E122
Drosophila Genetic Reference Panel 630, Female, Environment 3, Fly 5, Library 2


title: DGRP787 M_E3_6_L1

description:
EP6E061
Drosophila Genetic Reference Panel 787, Male, Environment 3, Fly 6, Library 1


title: DGRP790 F_E3_6_L1

description:
EP6E031
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 6, Library 1


title: DGRP229 M_E3_6_L1

description:
EP6E041
Drosophila Genetic Reference Panel 229, Male, Environment 3, Fly 6, Library 1


title: DGRP790 F_E3_1_L1

description:
EP6E021
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 1, Library 1


title: DGRP93 M_E3_6_L1

description:
EP6F091
Drosophila Genetic Reference Panel 93, Male, Environment 3, Fly 6, Library 1


title: DGRP790 F_E3_8_L1

description:
EP6E011
Drosophila Genetic Reference Panel 790, Female, Environment 3, Fly 8, Library 1


title: DGRP761 M_E3_2_L1

description:
EP6D121
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 2, Library 1


title: DGRP900 F_E3_1_L2

description:
EP6F022
Drosophila Genetic Reference Panel 900, Female, Environment 3, Fly 1, Library 2


title: DGRP761 F_E3_1_L1

description:
EP6D081
Drosophila Genetic Reference Panel 761, Female, Environment 3, Fly 1, Library 1


title: DGRP761 M_E3_1_L1

description:
EP6D111
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 1, Library 1


title: DGRP900 M_E3_2_L1

description:
EP6D061
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 2, Library 1


title: DGRP703 M_E3_3_L1

description:
EP6D091
Drosophila Genetic Reference Panel 703, Male, Environment 3, Fly 3, Library 1


title: DGRP900 M_E3_7_L1

description:
EP6D101
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 7, Library 1


title: DGRP812 F_E3_7_L2

description:
EP6D012
Drosophila Genetic Reference Panel 812, Female, Environment 3, Fly 7, Library 2


title: DGRP93 F_E3_1_L2

description:
EP6D052
Drosophila Genetic Reference Panel 93, Female, Environment 3, Fly 1, Library 2


title: DGRP804 M_E3_3_L1

description:
EP6C111
Drosophila Genetic Reference Panel 804, Male, Environment 3, Fly 3, Library 1


title: DGRP370 M_E3_3_L1

description:
EP6D041
Drosophila Genetic Reference Panel 370, Male, Environment 3, Fly 3, Library 1


title: DGRP900 M_E3_5_L1

description:
EP6D071
Drosophila Genetic Reference Panel 900, Male, Environment 3, Fly 5, Library 1


title: DGRP320 F_E3_4_L2

description:
EP6C122
Drosophila Genetic Reference Panel 320, Female, Environment 3, Fly 4, Library 2


title: DGRP352 M_E3_1_L1

description:
EP6C101
Drosophila Genetic Reference Panel 352, Male, Environment 3, Fly 1, Library 1


title: DGRP229 F_E3_1_L2

description:
EP6E052
Drosophila Genetic Reference Panel 229, Female, Environment 3, Fly 1, Library 2


title: DGRP320 F_E2_3_L2

description:
EP6C082
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 3, Library 2


title: DGRP790 F_E2_6_L2

description:
EP6C062
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 6, Library 2


title: Rib-GFP_fkh-Gal4_ChIP

city: Duluth

first: Joslynn

middle: Shannon

last: Lee

state: MN

address: 1035 University Drive

department: Biomedical Sciences

institute: University of Minnesota Medical School, Duluth campus

description:
GFP-tagged rib transcription factor driven by fkh-Gal4 driver
merged replicates

library_source: genomic

data_processing:
ChIP-seq reads were aligned to the dm6 genome assembly using BWA (Galaxy Tool Version 0.2.3) with default settings.
Replicates were merged using SamMerge (Galaxy Tool Version 1.1.2)
Peaks were called using MACS version 2.1.0.20140616 with the following setting: (P-value: 10e-5, mfold:10,32).
Genome_build: dm6
Supplementary_files_format_and_content: bed and bedgraph

molecule: genomic DNA

source_name: Stage 11-16 embryos

growth_protocol: Embryos (fkh-GAL4::UAS-rib-GFP and sage-GAL4::UAS-rib-GFP) were collected for 8h at RT and allowed to age for 11 hours prior to their isloation using a COPAS Select embro sorter (Union Biometrica).

extract_protocol:
Chromatin from three independent collections of stage 11-16 fkh:GAL4::UAS-rib-GFP and three of sage-GAL4::UAS-rib-GFP embryos were crosslinked at RT in 1.8% formaldehyde and homogenized for chromatin extraction. Anti-GFP antibody was used for immunoprecipitation.
Input and immunoprecipitated DNA were prepared for sequencing using the Illumina TruSeq ChIP Sample Preparation Kit per the manufacturer's instructions. Library construction was performed by the University of Minnesota Genomics Center.

tag: genotype

tag: embryonic stages

value: Stage 11-16


title: DGRP812 F_E2_1_L1

description:
EP6C071
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 1, Library 1


title: DGRP787 M_E2_7_L1

description:
EP6C031
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 7, Library 1


title: DGRP93 M_E2_5_L1

description:
EP6B121
Drosophila Genetic Reference Panel 93, Male, Environment 2, Fly 5, Library 1


title: DGRP787 F_E2_2_L2

description:
EP6C012
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 2, Library 2


title: DGRP804 M_E2_5_L2

description:
EP6C052
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 5, Library 2


title: DGRP850 M_E2_4_L1

description:
EP6C041
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 4, Library 1


title: DGRP320 M_E2_8_L1

description:
EP6B111
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 8, Library 1


title: DGRP93 F_E2_4_L1

description:
EP6C021
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 4, Library 1


title: DGRP630 F_E2_7_L2

description:
EP6B092
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 7, Library 2


title: DGRP93 F_E2_1_L1

description:
EP6B101
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 1, Library 1


title: DGRP761 M_E2_1_L2

description:
EP6B072
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 1, Library 2


title: DGRP822 F_E2_5_L2

description:
EP6B062
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 5, Library 2


title: DGRP761 M_E3_6_L1

description:
EP6C091
Drosophila Genetic Reference Panel 761, Male, Environment 3, Fly 6, Library 1


title: Rib-GFP_sage-Gal4_input

description:
input
merged replicates


title: DGRP93 F_E2_7_L2

description:
EP6B032
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 7, Library 2


title: Rib-GFP_sage-Gal4_ChIP

description:
GFP-tagged rib transcription factor driven by sage-Gal4 driver
merged replicates


title: DGRP790 M_E2_1_L1

description:
EP6B011
Drosophila Genetic Reference Panel 790, Male, Environment 2, Fly 1, Library 1


title: Rib-GFP_fkh-Gal4_input

description:
input
merged replicates


title: DGRP320 F_E2_2_L2

description:
EP6A112
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 2, Library 2


title: DGRP630 F_E2_5_L2

description:
EP6A072
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 5, Library 2


title: DGRP761 M_E2_3_L1

description:
EP6A081
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 3, Library 1


title: DGRP900 M_E2_6_L2

description:
EP6A092
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 6, Library 2


title: DGRP370 M_E2_2_L2

description:
EP6A102
Drosophila Genetic Reference Panel 370, Male, Environment 2, Fly 2, Library 2


title: DGRP812 M_E2_3_L1

description:
EP6A121
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 3, Library 1


title: DGRP761 F_E2_7_L2

description:
EP6A012
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 7, Library 2


title: DGRP787 F_E2_7_L1

description:
EP6A031
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 7, Library 1


title: DGRP790 F_E2_8_L1

description:
EP6A041
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 8, Library 1


title: DGRP563 F_E2_5_L1

description:
EP6B081
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 5, Library 1


title: DGRP787 M_E2_3_L1

description:
EP5H111
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 3, Library 1


title: DGRP320 M_E2_6_L2

description:
EP6A022
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 6, Library 2


title: DGRP630 M_E2_8_L1

description:
EP6A051
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 8, Library 1


title: DGRP703 M_E2_1_L3

description:
EP6A063
Drosophila Genetic Reference Panel 703, Male, Environment 2, Fly 1, Library 3


title: DGRP804 F_E2_1_L2

description:
EP5H092
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 1, Library 2


title: DGRP787 F_E2_1_L2

description:
EP5H102
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 1, Library 2


title: DGRP822 F_E2_8_L2

description:
EP5H072
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 8, Library 2


title: DGRP563 M_E2_2_L2

description:
EP6B022
Drosophila Genetic Reference Panel 563, Male, Environment 2, Fly 2, Library 2


title: DGRP804 F_E3_1_L2

description:
EP6D022
Drosophila Genetic Reference Panel 804, Female, Environment 3, Fly 1, Library 2


title: DGRP822 M_E2_5_L1

description:
EP5H031
Drosophila Genetic Reference Panel 822, Male, Environment 2, Fly 5, Library 1


title: DGRP900 M_E2_7_L1

description:
EP5H011
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 7, Library 1


title: DGRP563 F_E2_7_L1

description:
EP5H051
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 7, Library 1


title: DGRP761 F_E2_2_L1

description:
EP5H021
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 2, Library 1


title: DGRP787 F_E2_4_L2

description:
EP5H042
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 4, Library 2


title: DGRP790 M_E2_7_L1

description:
EP5G091
Drosophila Genetic Reference Panel 790, Male, Environment 2, Fly 7, Library 1


title: DGRP900 F_E2_5_L1

description:
EP5G101
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 5, Library 1


title: DGRP229 M_E2_1_L1

description:
EP5G121
Drosophila Genetic Reference Panel 229, Male, Environment 2, Fly 1, Library 1


title: DGRP93 F_E2_3_L2

description:
EP5G112
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 3, Library 2


title: DGRP630 F_E2_3_L1

description:
EP5H081
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 3, Library 1


title: DGRP804 F_E2_2_L2

description:
EP5G072
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 2, Library 2


title: DGRP804 M_E2_6_L1

description:
EP5G051
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 6, Library 1


title: DGRP630 F_E2_8_L1

description:
EP5G031
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 8, Library 1


title: DGRP850 M_E2_1_L1

description:
EP5G021
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 1, Library 1


title: DGRP790 M_E2_3_L1

description:
EP5G041
Drosophila Genetic Reference Panel 790, Male, Environment 2, Fly 3, Library 1


title: DGRP787 M_E2_8_L1

description:
EP5G061
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 8, Library 1


title: DGRP93 M_E2_6_L1

description:
EP5F101
Drosophila Genetic Reference Panel 93, Male, Environment 2, Fly 6, Library 1


title: DGRP703 F_E2_4_L1

description:
EP5F091
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 4, Library 1


title: DGRP229 M_E2_4_L1

description:
EP5F111
Drosophila Genetic Reference Panel 229, Male, Environment 2, Fly 4, Library 1


title: DGRP229 F_E2_6_L2

description:
EP5F122
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 6, Library 2


title: DGRP630 F_E2_1_L1

description:
EP5F031
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 1, Library 1


title: DGRP630 M_E2_5_L1

description:
EP5F041
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 5, Library 1


title: DGRP900 F_E2_6_L1

description:
EP5F071
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 6, Library 1


title: DGRP703 F_E2_5_L2

description:
EP5F082
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 5, Library 2


title: DGRP370 M_E2_1_L1

description:
EP5G081
Drosophila Genetic Reference Panel 370, Male, Environment 2, Fly 1, Library 1


title: DGRP352 M_E2_1_L1

description:
EP5F021
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 1, Library 1


title: DGRP93 M_E2_1_L1

description:
EP5F061
Drosophila Genetic Reference Panel 93, Male, Environment 2, Fly 1, Library 1


title: DGRP370 F_E2_7_L2

description:
EP5G012
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 7, Library 2


title: DGRP320 F_E2_5_L1

description:
EP5H121
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 5, Library 1


title: DGRP850 F_E2_3_L2

description:
EP5F052
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 3, Library 2


title: DGRP563 M_E2_1_L1

description:
EP5E081
Drosophila Genetic Reference Panel 563, Male, Environment 2, Fly 1, Library 1


title: DGRP822 M_E2_6_L1

description:
EP5F011
Drosophila Genetic Reference Panel 822, Male, Environment 2, Fly 6, Library 1


title: DGRP370 M_E2_6_L1

description:
EP5E111
Drosophila Genetic Reference Panel 370, Male, Environment 2, Fly 6, Library 1


title: DGRP812 M_E2_6_L1

description:
EP5E101
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 6, Library 1


title: DGRP790 F_E2_5_L2

description:
EP5E092
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 5, Library 2


title: DGRP812 F_E2_2_L2

description:
EP5E122
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 2, Library 2


title: DGRP812 M_E2_8_L2

description:
EP5E062
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 8, Library 2


title: DGRP320 F_E2_4_L2

description:
EP5E042
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 4, Library 2


title: DGRP761 M_E2_7_L1

description:
EP5E031
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 7, Library 1


title: DGRP563 F_E2_2_L2

description:
EP5E022
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 2, Library 2


title: DGRP703 F_E2_8_L1

description:
EP5E011
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 8, Library 1


title: DGRP370 F_E2_1_L2

description:
EP5D062
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 1, Library 2


title: DGRP93 F_E2_5_L2

description:
EP5D092
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 5, Library 2


title: DGRP703 M_E2_6_L1

description:
EP5E071
Drosophila Genetic Reference Panel 703, Male, Environment 2, Fly 6, Library 1


title: DGRP370 M_E2_3_L1

description:
EP5D081
Drosophila Genetic Reference Panel 370, Male, Environment 2, Fly 3, Library 1


title: DGRP320 M_E2_3_L1

description:
EP5D121
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 3, Library 1


title: DGRP229 M_E2_2_L1

description:
EP5D111
Drosophila Genetic Reference Panel 229, Male, Environment 2, Fly 2, Library 1


title: DGRP761 F_E2_1_L1

description:
EP5D071
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 1, Library 1


title: DGRP804 F_E2_4_L1

description:
EP5C111
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 4, Library 1


title: DGRP812 M_E2_7_L1

description:
EP5E051
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 7, Library 1


title: DGRP900 F_E2_4_L2

description:
EP5D042
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 4, Library 2


title: DGRP812 M_E2_5_L1

description:
EP5D101
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 5, Library 1


title: DGRP352 M_E2_4_L1

description:
EP5D031
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 4, Library 1


title: DGRP563 F_E2_1_L2

description:
EP5C102
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 1, Library 2


title: DGRP900 M_E2_8_L1

description:
EP5C071
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 8, Library 1


title: DGRP822 M_E2_2_L1

description:
EP5D051
Drosophila Genetic Reference Panel 822, Male, Environment 2, Fly 2, Library 1


title: DGRP630 M_E2_2_L1

description:
EP5C081
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 2, Library 1


title: DGRP630 F_E2_2_L1

description:
EP5D011
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 2, Library 1


title: DGRP822 F_E2_6_L2

description:
EP5C062
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 6, Library 2


title: DGRP787 F_E2_6_L1

description:
EP5D021
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 6, Library 1


title: DGRP804 F_E2_7_L2

description:
EP5C052
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 7, Library 2


title: DGRP563 M_E2_4_L1

description:
EP5C091
Drosophila Genetic Reference Panel 563, Male, Environment 2, Fly 4, Library 1


title: DGRP761 M_E2_6_L1

description:
EP5C121
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 6, Library 1


title: DGRP563 F_E2_4_L1

description:
EP5C041
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 4, Library 1


title: DGRP320 M_E2_7_L1

description:
EP5B111
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 7, Library 1


title: DGRP563 M_E2_3_L1

description:
EP5C011
Drosophila Genetic Reference Panel 563, Male, Environment 2, Fly 3, Library 1


title: DGRP630 M_E2_4_L1

description:
EP5B101
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 4, Library 1


title: DGRP320 M_E2_2_L1

description:
EP5B121
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 2, Library 1


title: DGRP563 M_E2_6_L1

description:
EP5B091
Drosophila Genetic Reference Panel 563, Male, Environment 2, Fly 6, Library 1


title: DGRP229 M_E2_6_L1

description:
EP5C031
Drosophila Genetic Reference Panel 229, Male, Environment 2, Fly 6, Library 1


title: DGRP850 M_E2_3_L1

description:
EP5B061
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 3, Library 1


title: DGRP93 M_E2_4_L1

description:
EP5C021
Drosophila Genetic Reference Panel 93, Male, Environment 2, Fly 4, Library 1


title: DGRP812 F_E2_6_L2

description:
EP5B042
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 6, Library 2


title: DGRP370 F_E2_8_L2

description:
EP5B032
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 8, Library 2


title: DGRP761 F_E2_3_L2

description:
EP5B022
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 3, Library 2


title: DGRP850 F_E2_4_L2

description:
EP5B012
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 4, Library 2


title: DGRP850 F_E2_5_L2

description:
EP5B072
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 5, Library 2


title: DGRP352 M_E2_7_L1

description:
EP5A081
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 7, Library 1


title: DGRP790 F_E2_3_L1

description:
EP5A071
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 3, Library 1


title: DGRP787 F_E2_8_L2

description:
EP5A032
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 8, Library 2


title: DGRP370 F_E2_6_L1

description:
EP5A041
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 6, Library 1


title: DGRP850 F_E2_1_L1

description:
EP5A111
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 1, Library 1


title: DGRP630 M_E2_7_L2

description:
EP5A062
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 7, Library 2


title: DGRP787 M_E2_4_L1

description:
EP5A121
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 4, Library 1


title: DGRP352 M_E2_3_L2

description:
EP5A022
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 3, Library 2


title: DGRP787 M_E2_2_L1

description:
EP5A091
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 2, Library 1


title: DGRP320 M_E2_4_L1

description:
EP4H111
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 4, Library 1


title: DGRP352 M_E2_2_L1

description:
EP5A101
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 2, Library 1


title: DGRP812 F_E2_5_L2

description:
EP5B052
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 5, Library 2


title: DGRP761 M_E2_5_L1

description:
EP4H101
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 5, Library 1


title: DGRP352 F_E2_7_L1

description:
EP4H121
Drosophila Genetic Reference Panel 352, Female, Environment 2, Fly 7, Library 1


title: DGRP822 M_E2_3_L1

description:
EP4H081
Drosophila Genetic Reference Panel 822, Male, Environment 2, Fly 3, Library 1


title: DGRP850 F_E2_2_L1

description:
EP4H041
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 2, Library 1


title: DGRP370 F_E2_2_L1

description:
EP4H091
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 2, Library 1


title: DGRP900 M_E2_3_L1

description:
EP5B081
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 3, Library 1


title: DGRP703 F_E2_2_L1

description:
EP4H051
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 2, Library 1


title: DGRP900 F_E2_3_L1

description:
EP4H021
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 3, Library 1


title: DGRP787 F_E2_5_L1

description:
EP4G101
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 5, Library 1


title: DGRP630 F_E2_6_L1

description:
EP4G091
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 6, Library 1


title: DGRP812 M_E2_1_L1

description:
EP4G081
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 1, Library 1


title: DGRP630 M_E2_1_L1

description:
EP4H011
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 1, Library 1


title: DGRP804 M_E2_4_L1

description:
EP4G011
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 4, Library 1


title: DGRP900 F_E2_7_L1

description:
EP4H071
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 7, Library 1


title: DGRP761 M_E2_8_L1

description:
EP4G031
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 8, Library 1


title: DGRP790 M_E2_4_L1

description:
EP4G021
Drosophila Genetic Reference Panel 790, Male, Environment 2, Fly 4, Library 1


title: DGRP822 F_E2_7_L1

description:
EP4G071
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 7, Library 1


title: DGRP352 F_E2_1_L1

description:
EP4H031
Drosophila Genetic Reference Panel 352, Female, Environment 2, Fly 1, Library 1


title: DGRP229 M_E2_5_L1

description:
EP4G061
Drosophila Genetic Reference Panel 229, Male, Environment 2, Fly 5, Library 1


title: DGRP320 M_E2_5_L1

description:
EP4G041
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 5, Library 1


title: DGRP563 M_E2_7_L1

description:
EP4F091
Drosophila Genetic Reference Panel 563, Male, Environment 2, Fly 7, Library 1


title: DGRP761 M_E2_2_L1

description:
EP4F071
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 2, Library 1


title: DGRP850 M_E2_8_L1

description:
EP4F111
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 8, Library 1


title: DGRP320 F_E2_7_L1

description:
EP4F081
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 7, Library 1


title: DGRP804 F_E2_5_L1

description:
EP4F121
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 5, Library 1


title: DGRP812 M_E2_2_L1

description:
EP4F041
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 2, Library 1


title: DGRP563 M_E2_8_L1

description:
EP4F051
Drosophila Genetic Reference Panel 563, Male, Environment 2, Fly 8, Library 1


title: DGRP229 F_E2_3_L1

description:
EP4F031
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 3, Library 1


title: DGRP790 F_E2_2_L1

description:
EP4F011
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 2, Library 1


title: DGRP320 F_E2_6_L1

description:
EP4E101
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 6, Library 1


title: DGRP370 M_E2_4_L1

description:
EP4G111
Drosophila Genetic Reference Panel 370, Male, Environment 2, Fly 4, Library 1


title: DGRP320 F_E2_1_L1

description:
EP4E121
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 1, Library 1


title: DGRP93 F_E2_8_L1

description:
EP4G121
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 8, Library 1


title: DGRP850 F_E2_8_L1

description:
EP4G051
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 8, Library 1


title: DGRP370 F_E2_3_L1

description:
EP4F101
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 3, Library 1


title: DGRP352 F_E2_4_L1

description:
EP4E091
Drosophila Genetic Reference Panel 352, Female, Environment 2, Fly 4, Library 1


title: DGRP900 M_E2_2_L1

description:
EP4E071
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 2, Library 1


title: DGRP804 M_E2_8_L1

description:
EP4E081
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 8, Library 1


title: DGRP703 M_E2_8_L1

description:
EP4E111
Drosophila Genetic Reference Panel 703, Male, Environment 2, Fly 8, Library 1


title: DGRP761 F_E2_5_L1

description:
EP5A051
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 5, Library 1


title: DGRP822 F_E2_3_L1

description:
EP4E061
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 3, Library 1


title: DGRP812 M_E2_4_L1

description:
EP4E031
Drosophila Genetic Reference Panel 812, Male, Environment 2, Fly 4, Library 1


title: DGRP790 M_E2_2_L1

description:
EP4F021
Drosophila Genetic Reference Panel 790, Male, Environment 2, Fly 2, Library 1


title: DGRP900 F_E2_8_L1

description:
EP4E041
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 8, Library 1


title: DGRP761 M_E2_4_L1

description:
EP4E011
Drosophila Genetic Reference Panel 761, Male, Environment 2, Fly 4, Library 1


title: DGRP93 M_E2_3_L1

description:
EP4D121
Drosophila Genetic Reference Panel 93, Male, Environment 2, Fly 3, Library 1


title: DGRP850 M_E2_2_L1

description:
EP4D051
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 2, Library 1


title: DGRP787 M_E2_5_L1

description:
EP4E051
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 5, Library 1


title: DGRP812 F_E2_8_L1

description:
EP4D071
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 8, Library 1


title: DGRP850 M_E2_6_L1

description:
EP4D091
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 6, Library 1


title: DGRP812 F_E2_7_L1

description:
EP4D061
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 7, Library 1


title: DGRP900 M_E2_1_L1

description:
EP4D041
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 1, Library 1


title: DGRP703 M_E2_5_L1

description:
EP4D081
Drosophila Genetic Reference Panel 703, Male, Environment 2, Fly 5, Library 1


title: DGRP822 F_E2_4_L1

description:
EP4D011
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 4, Library 1


title: DGRP352 F_E2_2_L1

description:
EP4D031
Drosophila Genetic Reference Panel 352, Female, Environment 2, Fly 2, Library 1


title: DGRP822 M_E2_8_L1

description:
EP4D101
Drosophila Genetic Reference Panel 822, Male, Environment 2, Fly 8, Library 1


title: DGRP370 F_E2_4_L1

description:
EP4C121
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 4, Library 1


title: DGRP822 M_E2_4_L1

description:
EP4C111
Drosophila Genetic Reference Panel 822, Male, Environment 2, Fly 4, Library 1


title: DGRP703 F_E2_1_L1

description:
EP4C101
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 1, Library 1


title: DGRP229 F_E2_2_L1

description:
EP4C081
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 2, Library 1


title: DGRP787 M_E2_6_L1

description:
EP4C061
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 6, Library 1


title: DGRP761 F_E2_8_L1

description:
EP4C071
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 8, Library 1


title: DGRP790 F_E2_4_L1

description:
EP4C031
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 4, Library 1


title: DGRP804 F_E2_3_L1

description:
EP4E021
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 3, Library 1


title: DGRP761 F_E2_6_L1

description:
EP4C011
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 6, Library 1


title: DGRP703 M_E2_3_L1

description:
EP4C021
Drosophila Genetic Reference Panel 703, Male, Environment 2, Fly 3, Library 1


title: DGRP352 M_E2_5_L1

description:
EP4D111
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 5, Library 1


title: DGRP320 F_E2_8_L1

description:
EP4C051
Drosophila Genetic Reference Panel 320, Female, Environment 2, Fly 8, Library 1


title: DGRP804 M_E2_3_L1

description:
EP4C041
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 3, Library 1


title: DGRP822 F_E2_1_L1

description:
EP4B101
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 1, Library 1


title: DGRP787 F_E2_3_L1

description:
EP4C091
Drosophila Genetic Reference Panel 787, Female, Environment 2, Fly 3, Library 1


title: DGRP563 F_E2_6_L1

description:
EP4B121
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 6, Library 1


title: DGRP320 M_E2_1_L1

description:
EP4B111
Drosophila Genetic Reference Panel 320, Male, Environment 2, Fly 1, Library 1


title: PB-derived Monocytes

city: Tsukuba

first: Akira

last: Shibuya

state: Ibaraki

address: 1-1-1 Tennodai

department: Immunology

country: Japan

institute: University of Tsukuba

description:
PB-derived primary cells
Humans_FC_MCvsOthercells.txt

data_processing:
LifeScope™ Genomic Analysis Software 2.5.1 was used to produce bam files
Bam files were analysed with Avadis NGS software. Protein-coding genes were selected.
Genome_build: hg19
'Value' column: read density
072415_FC_MCvsT_PC.txt
Value_FC_MCvsT' column: fold change in read densities between 'PB-derived cultured MCs' and 'PB-derived T cells
072415_FC_MCvsB_PC.txt
Value_FC_MCvsB' column: fold change in read densities between 'PB-derived cultured MCs' and 'PB-derived B cells
072415_FC_MCvsMo_PC.txt
Value_FC_MCvsB' column: fold change in read densities between 'PB-derived cultured MCs' and 'PB-derived Monocytes
In each txt file above, column of 'Gene Symbol' is included.

molecule: total RNA

organism: Homo sapiens

source_name: Peripheral blood

growth_protocol: PB-derived cultured MCs were generated by culture of CD34+ hematopoietic stem cells (HSC) in the PB in the presence of IL-3, IL-6, and stem cell factor. PB-derived T cells (CD3+), B cells (CD19+), and monocytes (CD14+) were isolated by using a MACS cell separation system (Miltenyi Biotec).

extract_protocol:
RNA of cultured MCs and other cells were harvested using ISOGEN reagent.
SOLiD™ Total RNA-Seq Kit

tag: gender

value: male

tag: cell type

value: PB-derived Monocytes


title: DGRP352 M_E2_8_L1

description:
EP4A121
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 8, Library 1


title: DGRP229 F_E2_5_L1

description:
EP4B081
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 5, Library 1


title: DGRP787 M_E2_1_L1

description:
EP4B091
Drosophila Genetic Reference Panel 787, Male, Environment 2, Fly 1, Library 1


title: DGRP229 F_E2_4_L1

description:
EP4B031
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 4, Library 1


title: DGRP804 F_E2_8_L1

description:
EP4B071
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 8, Library 1


title: DGRP900 F_E2_2_L1

description:
EP4B051
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 2, Library 1


title: DGRP761 F_E2_4_L1

description:
EP4B061
Drosophila Genetic Reference Panel 761, Female, Environment 2, Fly 4, Library 1


title: PB-derived T cells

value: PB-derived T cells


title: DGRP804 M_E2_2_L1

description:
EP4B021
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 2, Library 1


title: DGRP229 F_E2_8_L1

description:
EP4A091
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 8, Library 1


title: DGRP370 M_E2_5_L1

description:
EP4A101
Drosophila Genetic Reference Panel 370, Male, Environment 2, Fly 5, Library 1


title: DGRP703 M_E2_7_L1

description:
EP4A061
Drosophila Genetic Reference Panel 703, Male, Environment 2, Fly 7, Library 1


title: DGRP804 F_E2_6_L1

description:
EP4A081
Drosophila Genetic Reference Panel 804, Female, Environment 2, Fly 6, Library 1


title: PB-derived cultured MCs

description:
PB-derived cultured cells
PB_derived_cultured_MC.txt; 23102_003_2012_02_08_1_06-1-1

value: PB-derived cultured MCs


title: DGRP703 F_E2_7_L1

description:
EP4A021
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 7, Library 1


title: DGRP229 F_E2_7_L1

description:
EP4B041
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 7, Library 1


title: DGRP900 M_E2_5_L1

description:
EP4A111
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 5, Library 1


title: DGRP563 F_E2_3_L1

description:
EP4A041
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 3, Library 1


title: DGRP804 M_E2_1_L1

description:
EP4A051
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 1, Library 1


title: DGRP93 M_E2_8_L1

description:
EP4A071
Drosophila Genetic Reference Panel 93, Male, Environment 2, Fly 8, Library 1


title: DGRP703 M_E2_4_L1

description:
EP3H101
Drosophila Genetic Reference Panel 703, Male, Environment 2, Fly 4, Library 1


title: DGRP229 F_E2_1_L1

description:
EP3H081
Drosophila Genetic Reference Panel 229, Female, Environment 2, Fly 1, Library 1


title: DGRP563 F_E2_8_L1

description:
EP4A031
Drosophila Genetic Reference Panel 563, Female, Environment 2, Fly 8, Library 1


title: PB-derived B cells

description:
PB-derived primary cells
Humans_FC_MCvsOthercells.txt

value: PB-derived B cells


title: DGRP703 F_E2_6_L1

description:
EP4A011
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 6, Library 1


title: DGRP93 M_E2_2_L1

description:
EP3H071
Drosophila Genetic Reference Panel 93, Male, Environment 2, Fly 2, Library 1


title: DGRP229 M_E2_8_L1

description:
EP3H111
Drosophila Genetic Reference Panel 229, Male, Environment 2, Fly 8, Library 1


title: DGRP850 M_E2_5_L1

description:
EP3H091
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 5, Library 1


title: DGRP630 F_E2_4_L1

description:
EP3H051
Drosophila Genetic Reference Panel 630, Female, Environment 2, Fly 4, Library 1


title: DGRP850 M_E2_7_L1

description:
EP3H061
Drosophila Genetic Reference Panel 850, Male, Environment 2, Fly 7, Library 1


title: DGRP850 F_E2_6_L1

description:
EP4B011
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 6, Library 1


title: DGRP790 F_E2_1_L1

description:
EP3H031
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 1, Library 1


title: DGRP352 M_E2_6_L1

description:
EP3G121
Drosophila Genetic Reference Panel 352, Male, Environment 2, Fly 6, Library 1


title: DGRP790 M_E2_8_L1

description:
EP3G111
Drosophila Genetic Reference Panel 790, Male, Environment 2, Fly 8, Library 1


title: DGRP804 M_E2_7_L1

description:
EP3H121
Drosophila Genetic Reference Panel 804, Male, Environment 2, Fly 7, Library 1


title: DGRP352 F_E2_5_L1

description:
EP3H021
Drosophila Genetic Reference Panel 352, Female, Environment 2, Fly 5, Library 1


title: DGRP630 M_E2_6_L1

description:
EP3H011
Drosophila Genetic Reference Panel 630, Male, Environment 2, Fly 6, Library 1


title: DGRP93 M_E2_7_L1

description:
EP3H041
Drosophila Genetic Reference Panel 93, Male, Environment 2, Fly 7, Library 1


title: DGRP822 M_E2_1_L1

description:
EP3G091
Drosophila Genetic Reference Panel 822, Male, Environment 2, Fly 1, Library 1


title: DGRP352 F_E2_6_L1

description:
EP3G071
Drosophila Genetic Reference Panel 352, Female, Environment 2, Fly 6, Library 1


title: DGRP93 F_E2_2_L1

description:
EP3G081
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 2, Library 1


title: DGRP812 F_E2_4_L1

description:
EP3G061
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 4, Library 1


title: DGRP812 F_E2_3_L1

description:
EP3G051
Drosophila Genetic Reference Panel 812, Female, Environment 2, Fly 3, Library 1


title: DGRP900 F_E2_1_L1

description:
EP3G031
Drosophila Genetic Reference Panel 900, Female, Environment 2, Fly 1, Library 1


title: DGRP93 F_E2_6_L1

description:
EP3G041
Drosophila Genetic Reference Panel 93, Female, Environment 2, Fly 6, Library 1


title: DGRP850 F_E2_7_L1

description:
EP3F121
Drosophila Genetic Reference Panel 850, Female, Environment 2, Fly 7, Library 1


title: DGRP563 M_E2_5_L1

description:
EP3G011
Drosophila Genetic Reference Panel 563, Male, Environment 2, Fly 5, Library 1


title: DGRP900 M_E2_4_L1

description:
EP3F101
Drosophila Genetic Reference Panel 900, Male, Environment 2, Fly 4, Library 1


title: DGRP352 F_E2_8_L1

description:
EP3F111
Drosophila Genetic Reference Panel 352, Female, Environment 2, Fly 8, Library 1


title: DGRP790 F_E2_7_L1

description:
EP3F081
Drosophila Genetic Reference Panel 790, Female, Environment 2, Fly 7, Library 1


title: DGRP352 F_E2_3_L1

description:
EP3F051
Drosophila Genetic Reference Panel 352, Female, Environment 2, Fly 3, Library 1


title: DGRP703 F_E2_3_L1

description:
EP3G101
Drosophila Genetic Reference Panel 703, Female, Environment 2, Fly 3, Library 1


title: DGRP703 F_E1_5_L1

description:
EP3F041
Drosophila Genetic Reference Panel 703, Female, Environment 1, Fly 5, Library 1


title: DGRP822 M_E1_2_L1

description:
EP3F011
Drosophila Genetic Reference Panel 822, Male, Environment 1, Fly 2, Library 1


title: DGRP790 F_E1_3_L1

description:
EP3F031
Drosophila Genetic Reference Panel 790, Female, Environment 1, Fly 3, Library 1


title: DGRP229 M_E2_7_L1

description:
EP3F091
Drosophila Genetic Reference Panel 229, Male, Environment 2, Fly 7, Library 1


title: DGRP352 M_E1_2_L1

description:
EP3E121
Drosophila Genetic Reference Panel 352, Male, Environment 1, Fly 2, Library 1


title: DGRP630 M_E1_1_L1

description:
EP3E071
Drosophila Genetic Reference Panel 630, Male, Environment 1, Fly 1, Library 1


title: DGRP787 M_E1_8_L1

description:
EP3E091
Drosophila Genetic Reference Panel 787, Male, Environment 1, Fly 8, Library 1


title: DGRP790 M_E2_6_L1

description:
EP3G021
Drosophila Genetic Reference Panel 790, Male, Environment 2, Fly 6, Library 1


title: DGRP804 F_E1_4_L1

description:
EP3E081
Drosophila Genetic Reference Panel 804, Female, Environment 1, Fly 4, Library 1


title: DGRP370 M_E1_8_L1

description:
EP3E051
Drosophila Genetic Reference Panel 370, Male, Environment 1, Fly 8, Library 1


title: DGRP822 F_E1_6_L1

description:
EP3E101
Drosophila Genetic Reference Panel 822, Female, Environment 1, Fly 6, Library 1


title: DGRP787 F_E1_7_L1

description:
EP3E041
Drosophila Genetic Reference Panel 787, Female, Environment 1, Fly 7, Library 1


title: DGRP822 F_E2_2_L1

description:
EP3F071
Drosophila Genetic Reference Panel 822, Female, Environment 2, Fly 2, Library 1


title: DGRP630 M_E1_8_L1

description:
EP3E011
Drosophila Genetic Reference Panel 630, Male, Environment 1, Fly 8, Library 1


title: DGRP229 M_E1_4_L1

description:
EP3E031
Drosophila Genetic Reference Panel 229, Male, Environment 1, Fly 4, Library 1


title: DGRP761 F_E1_7_L1

description:
EP3E021
Drosophila Genetic Reference Panel 761, Female, Environment 1, Fly 7, Library 1


title: DGRP822 F_E1_1_L2

description:
EP3E062
Drosophila Genetic Reference Panel 822, Female, Environment 1, Fly 1, Library 2


title: DGRP352 F_E1_8_L1

description:
EP3D121
Drosophila Genetic Reference Panel 352, Female, Environment 1, Fly 8, Library 1


title: DGRP370 F_E2_5_L1

description:
EP3F061
Drosophila Genetic Reference Panel 370, Female, Environment 2, Fly 5, Library 1


title: DGRP850 M_E1_1_L1

description:
EP3D111
Drosophila Genetic Reference Panel 850, Male, Environment 1, Fly 1, Library 1


title: DGRP93 F_E1_8_L1

description:
EP3D091
Drosophila Genetic Reference Panel 93, Female, Environment 1, Fly 8, Library 1


title: DGRP229 M_E1_8_L1

description:
EP3D101
Drosophila Genetic Reference Panel 229, Male, Environment 1, Fly 8, Library 1


title: DGRP900 F_E1_2_L1

description:
EP3D071
Drosophila Genetic Reference Panel 900, Female, Environment 1, Fly 2, Library 1


title: DGRP812 M_E1_7_L1

description:
EP3D081
Drosophila Genetic Reference Panel 812, Male, Environment 1, Fly 7, Library 1


title: DGRP563 F_E1_3_L1

description:
EP3D061
Drosophila Genetic Reference Panel 563, Female, Environment 1, Fly 3, Library 1


title: DGRP320 M_E1_8_L1

description:
EP3F021
Drosophila Genetic Reference Panel 320, Male, Environment 1, Fly 8, Library 1


title: DGRP787 M_E1_5_L1

description:
EP3D051
Drosophila Genetic Reference Panel 787, Male, Environment 1, Fly 5, Library 1


title: DGRP761 F_E1_6_L1

description:
EP3D021
Drosophila Genetic Reference Panel 761, Female, Environment 1, Fly 6, Library 1


title: DGRP900 M_E1_3_L1

description:
EP3C111
Drosophila Genetic Reference Panel 900, Male, Environment 1, Fly 3, Library 1


title: DGRP804 F_E1_3_L1

description:
EP3D011
Drosophila Genetic Reference Panel 804, Female, Environment 1, Fly 3, Library 1


title: DGRP790 M_E1_1_L1

description:
EP3C101
Drosophila Genetic Reference Panel 790, Male, Environment 1, Fly 1, Library 1


title: DGRP812 M_E1_6_L1

description:
EP3C081
Drosophila Genetic Reference Panel 812, Male, Environment 1, Fly 6, Library 1


title: DGRP812 F_E1_3_L1

description:
EP3C061
Drosophila Genetic Reference Panel 812, Female, Environment 1, Fly 3, Library 1


title: DGRP790 M_E1_4_L1

description:
EP3C071
Drosophila Genetic Reference Panel 790, Male, Environment 1, Fly 4, Library 1


title: DGRP563 M_E1_8_L1

description:
EP3B111
Drosophila Genetic Reference Panel 563, Male, Environment 1, Fly 8, Library 1


title: DGRP900 F_E1_8_L1

description:
EP3C031
Drosophila Genetic Reference Panel 900, Female, Environment 1, Fly 8, Library 1


title: DGRP320 F_E1_6_L1

description:
EP3B091
Drosophila Genetic Reference Panel 320, Female, Environment 1, Fly 6, Library 1


title: DGRP812 F_E1_8_L1

description:
EP3C011
Drosophila Genetic Reference Panel 812, Female, Environment 1, Fly 8, Library 1


title: DGRP352 F_E1_4_L1

description:
EP3B101
Drosophila Genetic Reference Panel 352, Female, Environment 1, Fly 4, Library 1


title: DGRP93 M_E1_8_L1

description:
EP3C051
Drosophila Genetic Reference Panel 93, Male, Environment 1, Fly 8, Library 1


title: DGRP229 M_E1_1_L1

description:
EP3B121
Drosophila Genetic Reference Panel 229, Male, Environment 1, Fly 1, Library 1


title: DGRP790 F_E1_7_L1

description:
EP3B081
Drosophila Genetic Reference Panel 790, Female, Environment 1, Fly 7, Library 1


title: DGRP812 F_E1_2_L1

description:
EP3B071
Drosophila Genetic Reference Panel 812, Female, Environment 1, Fly 2, Library 1


title: DGRP229 M_E1_7_L1

description:
EP3D041
Drosophila Genetic Reference Panel 229, Male, Environment 1, Fly 7, Library 1


title: DGRP787 F_E1_2_L1

description:
EP3B061
Drosophila Genetic Reference Panel 787, Female, Environment 1, Fly 2, Library 1


title: DGRP850 F_E1_3_L1

description:
EP3B051
Drosophila Genetic Reference Panel 850, Female, Environment 1, Fly 3, Library 1


title: DGRP900 M_E1_1_L1

description:
EP3D031
Drosophila Genetic Reference Panel 900, Male, Environment 1, Fly 1, Library 1


title: DGRP900 M_E1_7_L1

description:
EP3A121
Drosophila Genetic Reference Panel 900, Male, Environment 1, Fly 7, Library 1


title: DGRP370 M_E1_3_L1

description:
EP3B031
Drosophila Genetic Reference Panel 370, Male, Environment 1, Fly 3, Library 1


title: DGRP703 F_E1_1_L1

description:
EP3B041
Drosophila Genetic Reference Panel 703, Female, Environment 1, Fly 1, Library 1


title: DGRP370 M_E1_1_L1

description:
EP3B011
Drosophila Genetic Reference Panel 370, Male, Environment 1, Fly 1, Library 1


title: DGRP563 M_E1_2_L1

description:
EP3C121
Drosophila Genetic Reference Panel 563, Male, Environment 1, Fly 2, Library 1


title: DGRP703 M_E1_5_L1

description:
EP3A111
Drosophila Genetic Reference Panel 703, Male, Environment 1, Fly 5, Library 1


title: DGRP703 M_E1_1_L1

description:
EP3A101
Drosophila Genetic Reference Panel 703, Male, Environment 1, Fly 1, Library 1


title: DGRP229 M_E1_3_L1

description:
EP3A071
Drosophila Genetic Reference Panel 229, Male, Environment 1, Fly 3, Library 1


title: DGRP370 F_E1_1_L1

description:
EP3A091
Drosophila Genetic Reference Panel 370, Female, Environment 1, Fly 1, Library 1


title: DGRP761 M_E1_2_L1

description:
EP3C021
Drosophila Genetic Reference Panel 761, Male, Environment 1, Fly 2, Library 1


title: DGRP850 F_E1_6_L1

description:
EP3A061
Drosophila Genetic Reference Panel 850, Female, Environment 1, Fly 6, Library 1


title: DGRP790 F_E1_4_L1

description:
EP3C041
Drosophila Genetic Reference Panel 790, Female, Environment 1, Fly 4, Library 1


title: DGRP630 F_E1_1_L1

description:
EP3A051
Drosophila Genetic Reference Panel 630, Female, Environment 1, Fly 1, Library 1


title: DGRP790 F_E1_2_L1

description:
EP3A041
Drosophila Genetic Reference Panel 790, Female, Environment 1, Fly 2, Library 1


title: DGRP630 M_E1_7_L1

description:
EP3A011
Drosophila Genetic Reference Panel 630, Male, Environment 1, Fly 7, Library 1


title: DGRP900 M_E1_4_L1

description:
EP3A031
Drosophila Genetic Reference Panel 900, Male, Environment 1, Fly 4, Library 1


title: DGRP822 F_E1_8_L1

description:
EP2H111
Drosophila Genetic Reference Panel 822, Female, Environment 1, Fly 8, Library 1


title: DGRP93 F_E1_2_L1

description:
EP2H091
Drosophila Genetic Reference Panel 93, Female, Environment 1, Fly 2, Library 1


title: DGRP370 F_E1_7_L1

description:
EP2H101
Drosophila Genetic Reference Panel 370, Female, Environment 1, Fly 7, Library 1


title: DGRP812 F_E1_7_L1

description:
EP3B021
Drosophila Genetic Reference Panel 812, Female, Environment 1, Fly 7, Library 1


title: DGRP761 F_E1_2_L1

description:
EP2H081
Drosophila Genetic Reference Panel 761, Female, Environment 1, Fly 2, Library 1


title: DGRP320 M_E1_6_L1

description:
EP2H071
Drosophila Genetic Reference Panel 320, Male, Environment 1, Fly 6, Library 1


title: DGRP790 F_E1_5_L1

description:
EP2H061
Drosophila Genetic Reference Panel 790, Female, Environment 1, Fly 5, Library 1


title: DGRP703 F_E1_6_L1

description:
EP2H041
Drosophila Genetic Reference Panel 703, Female, Environment 1, Fly 6, Library 1


title: DGRP804 M_E1_8_L1

description:
EP2G111
Drosophila Genetic Reference Panel 804, Male, Environment 1, Fly 8, Library 1


title: DGRP563 F_E1_6_L1

description:
EP2H051
Drosophila Genetic Reference Panel 563, Female, Environment 1, Fly 6, Library 1


title: DGRP630 F_E1_4_L1

description:
EP2H011
Drosophila Genetic Reference Panel 630, Female, Environment 1, Fly 4, Library 1


title: DGRP850 M_E1_7_L1

description:
EP2H021
Drosophila Genetic Reference Panel 850, Male, Environment 1, Fly 7, Library 1


title: DGRP703 M_E1_6_L1

description:
EP2H031
Drosophila Genetic Reference Panel 703, Male, Environment 1, Fly 6, Library 1


title: DGRP790 M_E1_6_L1

description:
EP2G071
Drosophila Genetic Reference Panel 790, Male, Environment 1, Fly 6, Library 1


title: DGRP703 F_E1_2_L1

description:
EP2G091
Drosophila Genetic Reference Panel 703, Female, Environment 1, Fly 2, Library 1


title: DGRP761 F_E1_3_L1

description:
EP2G121
Drosophila Genetic Reference Panel 761, Female, Environment 1, Fly 3, Library 1


title: DGRP320 F_E1_2_L1

description:
EP2G081
Drosophila Genetic Reference Panel 320, Female, Environment 1, Fly 2, Library 1


title: DGRP320 M_E1_5_L1

description:
EP2G101
Drosophila Genetic Reference Panel 320, Male, Environment 1, Fly 5, Library 1


title: DGRP790 F_E1_6_L1

description:
EP2H121
Drosophila Genetic Reference Panel 790, Female, Environment 1, Fly 6, Library 1


title: DGRP703 F_E1_3_L1

description:
EP2G061
Drosophila Genetic Reference Panel 703, Female, Environment 1, Fly 3, Library 1


title: DGRP790 M_E1_8_L1

description:
EP2G051
Drosophila Genetic Reference Panel 790, Male, Environment 1, Fly 8, Library 1


title: DGRP900 M_E1_5_L1

description:
EP2G041
Drosophila Genetic Reference Panel 900, Male, Environment 1, Fly 5, Library 1


title: DGRP900 F_E1_7_L1

description:
EP2G031
Drosophila Genetic Reference Panel 900, Female, Environment 1, Fly 7, Library 1


title: DGRP761 M_E1_1_L1

description:
EP3A021
Drosophila Genetic Reference Panel 761, Male, Environment 1, Fly 1, Library 1


title: MBD3_rep1

city: RTP

first: Takashi

last: Shimbo

address: 111 TW Alexander Dr.

institute: NIH/NIEHS

data_processing:
Reads were filtered based on a mean base quality score >20. Reads were mapped to hg19 genome using Bowtie 0.12.8
Duplicate reads were removed using MarkDuplicates.jar from picard-tools-1.107 package.
Non-duplicate, uniquely mapped paired-end reads were converted to a single fragment. BigWig files were generated to visualize the genomic coverage.
Genome_build: hg19
Supplementary_files_format_and_content: bigWig

growth_protocol: Cells were grown on 15 cm plates in DMEM medium with 10% FBS

extract_protocol: Tagmentation and PCR amplification were performed using Nextera XT kit (Illumina).

value: Breast

tag: chip antibody

tag: cell line


title: DGRP812 F_E1_4_L1

description:
EP2G021
Drosophila Genetic Reference Panel 812, Female, Environment 1, Fly 4, Library 1


title: DGRP630 M_E1_6_L1

description:
EP2F121
Drosophila Genetic Reference Panel 630, Male, Environment 1, Fly 6, Library 1


title: DGRP822 F_E1_7_L1

description:
EP2G011
Drosophila Genetic Reference Panel 822, Female, Environment 1, Fly 7, Library 1