title: input DNA

status: Public on Jun 11 2014

city: Gaithersburg

first: Jingya

last: Wang

state: Maryland

address: 1 medimmune way

department: Respiratory, Inflammation and Autoimmunity

institute: Medimmune

data_processing:
Basecalls performed using CASAVA-1.8.2
ChIP-seq reads were aligned to the mm9 genome assembly using BWA version 0.6.2 with default settings
Peaks were called using MACS version 1.4 with parameters -g mm --nomodel --shiftsize 75 -w –S
Genome_build: mm9
Supplementary_files_format_and_content: Tab-delimited text files generated MACS, including genome coordinate of peaks detected, fold enrichment and FDR

source_name: Hoxa9/Meis1-transformed HSCs_input

growth_protocol: Bone marrow from C57B6 mice was lineage depleted using the EasyStep Mouse Hematopoietic Progenitor Cell Enrichment Kit (Stem Cell Tech) and retrovirally transduced with MIGR1-HA-Hoxa9 and MIGR1-Flag-Meis1. Cells cultured in the presence of IL3.

extract_protocol:
Lysates were clarified from sonicated cells and histone-DNA complexes were isolated with antibody. Immunoprecipitated chromatin was RNase treated and column purified.
Libraries were generated using Illumina ChIP-seq Library Preparation Kit

tag: strain background

value: bone marrow

value: hematopoietic progenitor cells

tag: transduced with

value: MIGR1-HA-Hoxa9 and MIGR1-Flag-Meis1


title: H3K4me1_ChIPSeq

type: SRA

country: USA

library_source: genomic

molecule: genomic DNA

organism: Mus musculus

source_name: Hoxa9/Meis1-transformed HSCs_ChIP-seq

tag: tissue

tag: cell type

tag: chip antibody

tag: chip antibody vendor

value: Abcam

tag: chip antibody cat. #


title: H3K27me3_ChIPSeeq

value: Millipore


title: heavy_polysomes_fraction_mature_oocyte_replicate_1

status: Public on Jun 12 2014

city: Cambridge

first: Iva

last: Kronja

state: MA

address: 9 Cambridge Center

institute: Whitehead Institute for Biomedical Research

description:
ACACCT
In the case of mature_oocyte_replicate_1 sample 5 ng of S. cerevisae mRNA were added to each of the 14 sucrose gradient fractions to allow for normalization between the fractions during the analysis of mRNA sequencing. Next, gradient fractions were fused to represent follwing six fractions: RNPs, 40S, 60S+80S, low polysomes, medium polysomes and heavy polysomes.

library_source: transcriptomic

data_processing:
Samples 1-42: RNA-seq reads were checked with FastQC (http://www.bioinformatics.babraham.ac.uk/projects/fastqc/). Low quality reads and adapter sequences were removed with FASTX-Toolkit (http://hannonlab.cshl.edu/fastx_toolkit/index.html) when necessary. mRNAs associated with six different fractions of polysomal gradient (RNPs, 40S, 60S+80S, low polysomes, medium polysomes and heavy polysomes) were separated based on their barcodes. The Drosophila dm3 genome (from UCSC Genome Bioinformatics) and the S.cerevisiae genome (from Ensembl assembly EF2 release 62) were merged, and a new gene annotation file was created by combining fly .gtf with yeast .gtf downloaded from the same sources. Then, RNA-seq reads were mapped to the merged genome using TopHat v1.3.2 (PMID:19289445) with option --segment-length 20, and guided with the merged annotation file. Next, htseq-count (http://wwwhuber.embl.de/users/anders/HTSeq/doc/overview.html) was used for counting the reads in fly and yeast genes. Any reads mapped to rRNAs were removed from further analysis. We represented fly and yeast gene express levels with rpkm (reads per kilobase per million of mapped reads): rpkm = 109 (read count in gene exons/gene length) / (total fly reads +total yeast reads). If a gene has multiple isoforms, the length of its longest transcript was used as gene length. To quantitatively compare the levels of every mRNA across the polysome gradient fractions, we added into each fraction the same amount of S. cerevisiae mRNA as an exogenous spike-in. For each polysome gradient fraction, we calculated its average of the top 20 highly expressed yeast genes sorted by the highest abundance in the RNP fraction. The fly mRNA levels were normalized with the corresponding yeast scaling factor. When comparing different conditions, an mRNA had to have an rpkm greater or equal to 4 in all conditions to be considered in the analysis. For each fly gene, normalized mRNA levels of its six fractions were summed, and the percentage of the mRNA in each fraction was calculated by dividing its normalized level by this sum.
Samples 43−54: Raw read files were stipped of adapter and mapped first to the reference genome then the reference transcriptome using bowtie. Uniquely mapping reads falling within the open reading frame of annotated mRNAs (excluding the first 50 nt of each ORF) were used to calculate RPKM values for each sample, and values are reported for samples passing an mRNA-seq expression cutoff of 10 RPM.
Genome_build: dm3
Supplementary_files_format_and_content: Overlap_samples_43_54.txt: Tab-delimited text file containing the refseq gene ID and RPKM values for samples 43-54.

molecule: total RNA

organism: Drosophila melanogaster

source_name: mature oocytes

growth_protocol: In the case of mature oocyte samples, one day old Drosophila adult flies were fattened for additional three days in the presence of wet yeast at 25°C. The flies were four days old at the time of ovary dissection. In the case of activated eggs samples, wild type or png mutant virgin female flies were placed into collection bottles together with spermless twine (HB5) males. Activated eggs were collected for 2 hours on molasses plates in the presence of wet yeast at 23°C.

extract_protocol:
Samples 1−42: To extract RNA from the sucrose gradient fractions, 0.5% SDS was added into fractions followed by incubation with 200 μg/ml of Proteinase K (Sigma) for 30 minutes at 50°C. Next, the lysates were transferred into 15 ml Falcon phase-lock gel tubes (5 Prime), and RNA was isolated using the hot acid phenol method, followed by isopropanol precipitation. To extract RNA from the inputs, 60 μg of total RNA from unfractionated lysates of mature oocytes or activated eggs was used as a source to extract RNA by homogenizing the lysates in Trizol (Invitrogen) according to manufacturer’s instructions.
Samples 43−54: mRNA-seq: Total mRNA was used for poly(A)-selection. The RNA was randomly fragmented by partial alkaline hydrolysis and then size-selected RNA fragments (25-45 nt) were used for library preparation. Ribosome profiling: Cell extracts were processed as described in Guo et al., 2010 (GSE22004)
Samples 1−42: PolyA-selected RNA from 1 μg of total RNA was used to generate a cDNA library for Illumina based mRNA-sequencing according to the manufactures protocol.
Samples 43−54: Libraries were constructed exactly as described in Guo et al., 2010 (GSE22004)

treatment_protocol:
Samples 1−42: Ovaries dissected from four days old, fattened female flies were treated with 5 mg/ml of collagenase in Grace’s Unsupplemented Insect media to individualize the egg chambers. Next, mature oocytes (stage 14) were hand selected out of dissociated egg chambers that were at different stages of oogenesis. In the case of activated eggs, 0-2h collections of laid, activated eggs  were dechorionated in 50% bleach and washed extensively with water.  Collected mature oocytes or activated eggs were lysed in a buffer containing 0.25 M KCl, 0.05 M Tris-HCl (pH 7.3), 0.05 M MgCl2, 0.2% Triton X-100, 400U/ml of extract of RNasin (Promega), 2.5 mg/ml heparin, and 0.5 mg/ml cycloheximide. The lysates were cleared by centrifugation at 10000 rpm for 5 minutes. For puromycin treatment, mature oocytes or 0-2h collections of activated eggs  were lysed in a buffer containing 0.5 M NaCl, 25 mM magnesium acetate, 50 mM Tris HCl, pH 7.5, 2 mg/ml heparin, 1 mM DTT, 50 U/ml RNasin (Promega). The lysates were cleared by centrifugation at 10000 rpm for 10 minutes. After clearing, 2 mM puromycin, was added and the samples were then incubated for 20 min on ice, followed by 20 min at 37°C. After incubation, Magnesium acetate was added to 25 mM. The lysates containing 540 μg of total RNA were applied to 11 ml of a 10-50% linear sucrose gradient prepared in 0.25 M KCl, 0.05 M Tris-HCl (pH 7.3), 0.025 M MgCl2 and 0.5 mg/ml cycloheximide. In the case of puromycin treatment, 11 ml 10-50% sucrose gradient was prepared in 0.25 M KCl, 0.05 M Tris-HCl (pH 7.3) and 0.005 M MgCl2. The gradients were centrifuged in a Beckman SW-41Ti rotor at 36000 rpm for 2 hours at 4°C. Samples were fractionated by upward displacement with 60% sucrose on a gradient fractionator (Brandel). The absorbance measurement at 254 nm was performed using an ISCO UA-5 monitor.  In the case of samples 2-7 and 23-28,  5ng of S. cerevisae mRNA were added to each of the 14 fractions collected of the gradient to allow for normalization between the fractions during the analysis of mRNA sequencing. The fractions were then pooled to generate samples of RNPs, 40S, 60S + 80S, low (2-4) polysomes, medium (5-9) polysomes and heavy (10-higher) polysomes. In the case of samples 9-14, 16-21, 30-35 and 37-42,  5ng of S. cerevisae mRNA as well as firefly luciferase mRNA (Promega) was added to the six pooled fractions: RNPs, 40S, 60S + 80S, low (2-4) polysomes, medium (5-9) polysomes and heavy (10-higher) polysomes.
Samples 43−54: Mature oocytes and activated eggs were harvested as described above and either not treated or treated with 100 μg/mL cycloheximide. Samples were added to ribosome profiling lysis buffer (10 mM Tris-HCl, pH 7.4, 5 mM MgCl2, 100 mM KCl, 1% Triton X-100) and flash frozen in liquid nitrogen.

value: ovary

tag: strain

value: OregonR


title: HOXA9_ChIPSeq

value: anti-HA


title: C/ebpα_RNASeq_4OHT replicate 1 and 2

description: Sample 2; CT

data_processing:
Basecalls performed using CASAVA-1.8.2
Sequenced reads were aligned to the mm9 genome assembly using Bowtie v2.0.0.7 with default settings
RPKM (Reads per kilo base per million) were calculated and differentially expressed genes detected using cuffdiff v2.0.2
Genome_build: mm9
Supplementary_files_format_and_content: Tab-delimited text files generated by Cuffdiff, including RPKM values for each gene and whether they are differentially expressed (fold change >1.5 and adjusted p value <0.05)

growth_protocol: Bone marrow from Cebpaf/f;CreER mice was lineage depleted using the EasyStep Mouse Hematopoietic Progenitor Cell Enrichment Kit (Stem Cell Tech) and retrovirally transduced with MIGR1-HA-Hoxa9 and MIGR1-Flag-Meis1. Cells cultured in the presence of IL3. Continous treatment with 4OHT (5nM) leads to excision of Cepbaand loss of protein levels. EtOH is the vehicle for 4OHT.

extract_protocol:
RNA was purified using Qiagen RNeasy Kit with on-column DNase digestion.
Libraries were generated from purified RNA using Illumina TruSeq RNA Sample Preparation Kit

treatment_protocol: Cells treated with EtOH (vehicle) or 5nM 4OHT for 72 hours.

tag: genotype/variation

value: Cebpaf/f;CreER

value: hematopoietic progenitors

tag: transdueced with

tag: treated with

value: 5nM 4OHT for 72hrs


title: C/EBPα_ChIPSeq

value: anti-C/EBPα

value: SCBT


title: C/ebpα_RNASeq_EtOH replicate 1 and 2

description: Sample 1; CE

value: EtOH (vehicle) for 72 hrs


title: Insulin 0.5 hpi rep2

city: Bad Nauheim

first: Rubén

last: Marín-Juez

address: Ludwigstrasse 43

country: Germany

institute: Max Planck Institute

data_processing:
Base calling was done by the Illumina HCS version 2.0.12
Data analysis was performed using Genetiles software (www.genetiles.com)
Genome_build: Zv9_toplevel
Supplementary_files_format_and_content: tab-delimited text files include read values for each Sample

organism: Danio rerio

source_name: Whole embryo

growth_protocol: Zebrafish were handled in compliance with the local animal welfare regulations and maintained according to standard protocols (http://ZFIN.org). Embryos were grown at 28,5°C in egg water (60µg/ml Instant Ocean sea salts).

extract_protocol:
Embryos for RNA isolation were snap frozen in liquid nitrogen and subsequently stored at -80°C. Embryos were homogenized in 1 ml of TRIZOL® Reagent (Invitrogen) and subsequently total RNA was extracted according to the manufacturer’s instructions. The RNA samples were incubated for 20 min at 37° with 10 units of DNaseI (Roche Applied Science) to remove residual genomic DNA prior to purification using the RNeasy MinElute Cleanup kit (Qiagen) according to the RNA clean up protocol. The integrity of the RNA was confirmed by Lab-on-chip analysis using the 2100 Bioanalyzer (Agilent Technologies).
RNA libraries were prepared for sequencing using standard Illumina protocols

treatment_protocol: To inject PBS and Human recombinant insulin 1 nl was injected in the caudal aorta of 4dpf zebrafish embryos using a glass capillary

tag: developmental stage

value: 4 days post fertilization

tag: treatment

value: insulin

tag: time

value: 0.5 hpi

value: whole embryo

tag: genetic background

value: ABTL


title: Tube_Control_PIC_6h

city: New York City

first: Rahul

last: Satija

state: NY

address: 101 Avenue of the Americas

institute: New York Genome Center

data_processing:
We created a Bowtie index based on the UCSC knownGene (8) transcriptome, and aligned paired-end reads directly to this index using Bowtie v 0.12.7 with command line options -q --phred33-quals -n 2 -e 99999999 -l 25 -I 1 -X 1000 -a -m 200.
Next, we ran RSEM v1.11 with default parameters on these alignments to estimate expression levels. RSEM’s gene level expression estimates (tau) were multiplied by 1,000,000 to obtain transcript per million (TPM) estimates for each gene.
Genome_build: mm9
Supplementary_files_format_and_content: matrix of gene expression estimates across all samples

molecule: polyA RNA

source_name: BMDC (Tube Control, 6h PIC stimulated)

growth_protocol: Cells were cultured and stimulated as previously described (Amit et. al 2009)

extract_protocol: cDNA from each sample was prepared using the SMARTer cDNA synthesis (Clontech). RNA libraries were prepared for sequencing using Nextera XT (Illumina).

value: BMDC

tag: stimulation

value: Tube Control, 6h PIC stimulated


title: Tube_Control_PIC_2h

source_name: BMDC (Tube Control, 2h PIC stimulated)

value: Tube Control, 2h PIC stimulated


title: Tube_Control_PIC_4h

source_name: BMDC (Tube Control, 4h PIC stimulated)

value: Tube Control, 4h PIC stimulated


title: Tube_Control_PAM_6h

source_name: BMDC (Tube Control, 6h PAM stimulated)

value: Tube Control, 6h PAM stimulated


title: Tube_Control_PAM_4h

source_name: BMDC (Tube Control, 4h PAM stimulated)

value: Tube Control, 4h PAM stimulated


title: Tube_Control_LPS_6h

source_name: BMDC (Tube Control, 6h LPS stimulated)

value: Tube Control, 6h LPS stimulated


title: Tube_Control_PAM_1h

source_name: BMDC (Tube Control, 1h PAM stimulated)

value: Tube Control, 1h PAM stimulated


title: Tube_Control_LPS_2h

source_name: BMDC (Tube Control, 2h LPS stimulated)

value: Tube Control, 2h LPS stimulated


title: Tube_Control_LPS_4h

source_name: BMDC (Tube Control, 4h LPS stimulated)

value: Tube Control, 4h LPS stimulated


title: Tube_Control_LPS_1h

source_name: BMDC (Tube Control, 1h LPS stimulated)

value: Tube Control, 1h LPS stimulated


title: Tube_Control_Unstimulated

source_name: BMDC (Tube Control, Unstimulated)

value: Tube Control, Unstimulated


title: PIC_6h_S96

source_name: BMDC (6h PIC Stimulation)

value: 6h PIC Stimulation


title: PIC_6h_S92


title: PIC_6h_S90


title: PIC_6h_S93


title: PIC_6h_S91


title: PIC_6h_S94


title: PIC_6h_S89


title: PIC_6h_S88


title: PIC_6h_S87


title: PIC_6h_S86


title: PIC_6h_S85


title: HOXA9_RNASeq_EtOH replicate 1 and 2

growth_protocol: Bone marrow from C57B6 mice was lineage depleted using the EasyStep Mouse Hematopoietic Progenitor Cell Enrichment Kit (Stem Cell Tech) and retrovirally transduced with MIGR1-HA-Hoxa9-ER and MIGR1-Flag-Meis1. Cells cultured in the presence of IL3 and 4OHT (100nM). Withdrawal of 4OHT, and culture in EtOH (vehicle) leads to loss of nuclear Hoxa9-ER.

treatment_protocol: Cells transformed by continuous culture with 100nM 4OHT were washed 3x and cultured for 72hrs in EtOH or 100nM 4OHT.

value: bone marrow

value: hematopoietic progenitor cells

value: MIGR1-HA-Hoxa9 and MIGR1-Flag-Meis1

tag: cultured with

value: EtOH for 72hrs


title: Tube_Control_PIC_1h

source_name: BMDC (Tube Control, 1h PIC stimulated)

value: BMDC

value: Tube Control, 1h PIC stimulated


title: PIC_6h_S84


title: HOXA9_RNASeq_4OHT replicate 1 and 2

tag: strain background

value: 100nM 4OHT (tamoxifen) for 72hrs


title: Tube_Control_PAM_2h

source_name: BMDC (Tube Control, 2h PAM stimulated)

value: Tube Control, 2h PAM stimulated


title: PIC_6h_S83


title: PIC_6h_S95


title: PIC_6h_S82


title: PIC_6h_S78


title: PIC_6h_S79


title: PIC_6h_S81


title: PIC_6h_S80


title: PIC_6h_S77


title: PIC_6h_S73


title: PIC_6h_S75


title: PIC_6h_S74


title: PIC_6h_S76


title: PIC_6h_S72


title: PAO1.3_1

city: Braunschweig

first: Denitsa

last: Eckweiler

state: Lower Saxony

address: Spielmannstr. 7

department: Institute of Microbiology

institute: Technische Universität Braunschweig

data_processing:
RNA-seq reads were trimmed and mapped to the PAO1 genome using the Stampy aligner with default settings.
The Reads-per-Gene were calculated from the SAM files counting only the reads that were located within the gene boundaries
Mutations were identified using samtools version 0.1.18
Genome_build: ASM676v1
Supplementary_files_format_and_content: The processed files in TXT format include either Genes and Reads-per-gene (.rpg) or lists of called mutations (.flt.vcf)

organism: Pseudomonas aeruginosa PAO1

source_name: planktonic culture

growth_protocol: Cultures growing in LB medium at 37 °C were harvested after reaching an OD600 of 1.0

extract_protocol:
Using Rneasy kit (Qiagen) plus Qiashredder columns.
Customized protocol (Dötsch et al., PloS ONE, 2012). Bacterial rRNA was depleted using MICROBExpress kit with the Pseudomonas module (Ambion) and fragmented by sonication using Covaris Adaptive Acoustics device (Covaris). Upon ligation of barcoded adapters, reverse transcription with SuperScript II kit (Invitrogen) followed. Amplification was done by PCR using Illumina platform compatible primers. Established cDNA library was normalized by double strand specific nuclease treatment (Evrogen) according DSN Normalization Sample Preparation Guide from Illumina.

treatment_protocol: Cells from 3 pooled cultures were harvested by addition of the same volume of RNA-protect buffer (Qiagen) and centrifugation.

tag: agent


title: PIC_6h_S71


title: PIC_6h_S66


title: PIC_6h_S70


title: PIC_6h_S65


title: PIC_6h_S68


title: PIC_6h_S69


title: PIC_6h_S64


title: PIC_6h_S63


title: PIC_6h_S62


title: PIC_6h_S60


title: PIC_6h_S58


title: PIC_6h_S61


title: PIC_6h_S57


title: PIC_6h_S59


title: PIC_6h_S55


title: PIC_6h_S56


title: PIC_6h_S53


title: PIC_6h_S48


title: PIC_6h_S54


title: PIC_6h_S51


title: PIC_6h_S50


title: PIC_6h_S49


title: PIC_6h_S44


title: PIC_6h_S45


title: PIC_6h_S47


title: PIC_6h_S67


title: PIC_6h_S42


title: PIC_6h_S46


title: PIC_6h_S39


title: PIC_6h_S38


title: PIC_6h_S40


title: PIC_6h_S37


title: PIC_6h_S34


title: PIC_6h_S36


title: PIC_6h_S52


title: PIC_6h_S33


title: PIC_6h_S43


title: PIC_6h_S32


title: PIC_6h_S30


title: PIC_6h_S28


title: PIC_6h_S29


title: PIC_6h_S41


title: PIC_6h_S27


title: PIC_6h_S35


title: PIC_6h_S26


title: PIC_6h_S24


title: PIC_6h_S23


title: PIC_6h_S22


title: PIC_6h_S20


title: PIC_6h_S18


title: PIC_6h_S19


title: PIC_6h_S16


title: PIC_6h_S14


title: PIC_6h_S13


title: PIC_6h_S15


title: PIC_6h_S11


title: PIC_6h_S12


title: PIC_6h_S8


title: PIC_6h_S10


title: PIC_6h_S7


title: PIC_6h_S9


title: PIC_6h_S17


title: PIC_6h_S6


title: PIC_6h_S4


title: PIC_6h_S31


title: PIC_6h_S5


title: PIC_4h_S96

source_name: BMDC (4h PIC Stimulation)

value: 4h PIC Stimulation


title: PIC_6h_S1


title: PIC_6h_S25


title: PIC_6h_S3


title: PIC_6h_S2


title: PIC_4h_S95


title: PIC_4h_S93


title: PIC_4h_S94


title: PIC_4h_S91


title: PIC_4h_S90


title: PIC_6h_S21


title: PIC_4h_S92


title: PIC_4h_S89


title: PIC_4h_S86


title: PIC_4h_S88


title: PIC_4h_S87


title: PIC_4h_S79


title: PIC_4h_S83


title: PIC_4h_S80


title: PIC_4h_S76


title: PIC_4h_S77


title: PIC_4h_S81


title: PIC_4h_S73


title: PIC_4h_S71


title: PIC_4h_S72


title: PIC_4h_S69


title: PIC_4h_S74


title: PIC_4h_S70


title: PIC_4h_S67


title: PIC_4h_S66


title: PIC_4h_S65


title: PIC_4h_S68


title: PIC_4h_S62


title: PIC_4h_S64


title: PIC_4h_S63


title: PIC_4h_S60


title: PIC_4h_S59


title: PIC_4h_S57


title: PIC_4h_S58


title: PIC_4h_S61


title: PIC_4h_S55


title: PIC_4h_S54


title: PIC_4h_S53


title: PIC_4h_S78


title: PIC_4h_S52


title: PIC_4h_S51


title: PIC_4h_S48


title: PIC_4h_S49


title: PIC_4h_S47


title: PIC_4h_S46


title: PIC_4h_S45


title: PIC_4h_S41


title: PIC_4h_S44


title: PIC_4h_S43


title: PIC_4h_S39


title: PIC_4h_S38


title: PIC_4h_S37


title: PIC_4h_S34


title: PIC_4h_S33


title: PIC_4h_S36


title: PIC_4h_S75


title: PIC_4h_S35


title: PIC_4h_S32


title: PIC_4h_S29


title: PIC_4h_S31


title: PIC_4h_S27


title: PIC_4h_S28


title: PIC_4h_S30


title: PIC_4h_S24


title: PIC_4h_S50


title: PIC_4h_S23


title: PIC_4h_S21


title: PIC_4h_S20


title: PIC_4h_S25


title: PIC_4h_S19


title: PIC_4h_S22


title: PIC_4h_S18


title: PIC_4h_S40


title: PIC_4h_S17


title: PIC_4h_S15


title: PIC_4h_S14


title: PIC_4h_S13


title: PIC_4h_S12


title: PIC_4h_S9


title: PIC_4h_S10


title: PIC_4h_S26


title: PIC_4h_S3


title: PIC_4h_S7


title: PIC_4h_S1


title: PIC_4h_S8


title: PIC_4h_S5


title: PIC_2h_S95

source_name: BMDC (2h PIC Stimulation)

value: 2h PIC Stimulation


title: PIC_2h_S94


title: PIC_2h_S93


title: PIC_2h_S96


title: PIC_4h_S4


title: PIC_2h_S91


title: PIC_4h_S16


title: PIC_2h_S88


title: PIC_2h_S90


title: PIC_2h_S87


title: PIC_2h_S85


title: PIC_2h_S80


title: PIC_2h_S82


title: PIC_2h_S84


title: PIC_2h_S78


title: PIC_2h_S83


title: PIC_2h_S77


title: PIC_2h_S76


title: PIC_2h_S75


title: PIC_2h_S73


title: PIC_4h_S6


title: PIC_4h_S2


title: PIC_2h_S74


title: PIC_2h_S72


title: PIC_2h_S71


title: PIC_2h_S69


title: PIC_2h_S67


title: PIC_2h_S68


title: PIC_2h_S70


title: PIC_2h_S63


title: PIC_2h_S89


title: PIC_2h_S61


title: PIC_2h_S58


title: PIC_2h_S56


title: PIC_2h_S66


title: PIC_2h_S65


title: PIC_2h_S55


title: PIC_2h_S52


title: PIC_2h_S57


title: PIC_2h_S60


title: PIC_2h_S54


title: PIC_2h_S46


title: PIC_2h_S44


title: PIC_2h_S41


title: PIC_2h_S43


title: PIC_2h_S45


title: PIC_2h_S50


title: PIC_2h_S47


title: PIC_2h_S40


title: PIC_2h_S39


title: PIC_2h_S38


title: PIC_2h_S64


title: PIC_2h_S35


title: PIC_2h_S59


title: PIC_2h_S33


title: PIC_2h_S32


title: PIC_2h_S34


title: PIC_2h_S62


title: PIC_2h_S51


title: PIC_2h_S29


title: PIC_2h_S30


title: PIC_2h_S26


title: PIC_2h_S53


title: PIC_2h_S36


title: PIC_2h_S28


title: PIC_2h_S24


title: PIC_2h_S14


title: PIC_2h_S10


title: PIC_2h_S19


title: PIC_2h_S12


title: PIC_2h_S18


title: PIC_2h_S16


title: PIC_2h_S13


title: PIC_2h_S15


title: PIC_2h_S23


title: PIC_2h_S9


title: PIC_2h_S8


title: PIC_2h_S7


title: PIC_2h_S6


title: PIC_2h_S4


title: PIC_2h_S5


title: PIC_2h_S3


title: PIC_2h_S1


title: PIC_1h_S96

source_name: BMDC (1h PIC Stimulation)

value: 1h PIC Stimulation


title: PIC_1h_S95


title: PIC_1h_S94


title: PIC_2h_S2


title: PIC_2h_S25


title: PIC_2h_S37


title: PIC_2h_S27


title: PIC_1h_S92


title: PIC_1h_S91


title: PIC_1h_S89


title: PIC_1h_S90


title: PIC_2h_S11


title: PIC_1h_S86


title: PIC_1h_S85


title: PIC_1h_S87


title: PIC_1h_S84


title: PIC_1h_S82


title: PIC_1h_S83


title: PIC_1h_S88


title: PIC_1h_S80


title: PIC_1h_S81


title: PIC_1h_S78


title: PIC_1h_S77


title: PIC_1h_S93


title: PIC_1h_S76


title: PIC_1h_S74


title: PIC_1h_S73


title: PIC_1h_S75


title: PIC_1h_S67


title: PIC_1h_S71


title: PIC_1h_S70


title: PIC_1h_S66


title: PIC_1h_S69


title: PIC_1h_S63


title: PIC_1h_S64


title: PIC_1h_S72


title: PIC_1h_S65


title: PIC_1h_S62


title: PIC_1h_S79


title: PIC_1h_S60


title: PIC_1h_S56


title: PIC_1h_S54


title: PIC_1h_S53


title: PIC_1h_S52


title: PIC_1h_S68


title: PIC_1h_S57


title: PIC_1h_S49


title: PIC_1h_S59


title: PIC_1h_S46


title: PIC_1h_S45


title: PIC_1h_S51


title: PIC_1h_S44


title: PIC_1h_S43


title: PIC_1h_S48


title: PIC_1h_S40


title: PIC_1h_S42


title: PIC_1h_S39


title: PIC_1h_S37


title: PIC_1h_S35


title: PIC_1h_S33


title: PIC_1h_S58


title: PIC_1h_S32


title: PIC_1h_S61


title: PIC_1h_S55


title: PIC_1h_S47


title: PIC_1h_S31


title: PIC_1h_S36


title: PIC_1h_S28


title: PIC_1h_S30


title: PIC_1h_S34


title: PIC_1h_S50


title: PIC_1h_S26


title: PIC_1h_S29


title: PIC_1h_S27


title: PIC_1h_S25


title: PIC_1h_S22


title: PIC_1h_S23


title: PIC_1h_S41


title: PIC_1h_S24


title: PIC_1h_S21


title: PIC_1h_S19


title: PIC_1h_S20


title: PIC_1h_S38


title: PIC_1h_S18


title: PIC_1h_S13


title: PIC_1h_S16


title: PIC_1h_S14


title: PIC_1h_S15


title: PIC_1h_S12


title: PIC_1h_S11


title: PIC_1h_S17


title: PIC_1h_S9


title: PIC_1h_S8


title: PIC_1h_S10


title: PIC_1h_S6


title: PIC_1h_S5


title: PIC_1h_S1


title: PIC_1h_S7


title: PAM_6h_S96

source_name: BMDC (6h PAM Stimulation)

value: 6h PAM Stimulation


title: PAM_6h_S94


title: PIC_1h_S3


title: PAM_6h_S95


title: PAM_6h_S93


title: PIC_1h_S4


title: PAM_6h_S91


title: PAM_6h_S90


title: PAM_6h_S85


title: PAM_6h_S78


title: PAM_6h_S77


title: PAM_6h_S73


title: PAM_6h_S75


title: PAM_6h_S79


title: PAM_6h_S70


title: PAM_6h_S69


title: PAM_6h_S71


title: PAM_6h_S68


title: PAM_6h_S67


title: PAM_6h_S65


title: PAM_6h_S63


title: PAM_6h_S62


title: PIC_1h_S2


title: PAM_6h_S60


title: PAM_6h_S6


title: PAM_6h_S56


title: PAM_6h_S57


title: PAM_6h_S54


title: PAM_6h_S50


title: PAM_6h_S51


title: PAM_6h_S55


title: PAM_6h_S48


title: PAM_6h_S49


title: PAM_6h_S47


title: PAM_6h_S46


title: PAM_6h_S44


title: PAM_6h_S45


title: PAM_6h_S41


title: PAM_6h_S38


title: PAM_6h_S31


title: PAM_6h_S36


title: PAM_6h_S32


title: PAM_6h_S39


title: PAM_6h_S29


title: PAM_6h_S30


title: PAM_6h_S28


title: PAM_6h_S26


title: PAM_6h_S27


title: PAM_6h_S58


title: PAM_6h_S25


title: PAM_6h_S24


title: PAM_6h_S21


title: PAM_6h_S20


title: PAM_6h_S19


title: PAM_6h_S17


title: PAM_6h_S16


title: PAM_6h_S13


title: PAM_6h_S11


title: PAM_6h_S12


title: PAM_6h_S9


title: PAM_6h_S10


title: PAM_6h_S7


title: PAM_6h_S35


title: PAM_6h_S8


title: PAM_6h_S1


title: PAM_4h_S93

source_name: BMDC (4h PAM Stimulation)

value: 4h PAM Stimulation


title: PAM_4h_S96


title: PAM_4h_S92


title: PAM_4h_S95


title: PAM_6h_S3


title: PAM_4h_S87


title: PAM_6h_S86


title: PAM_4h_S90


title: PAM_4h_S91


title: PAM_4h_S85


title: PAM_4h_S88


title: PAM_4h_S84


title: PAM_4h_S81


title: PAM_4h_S80


title: PAM_4h_S86


title: PAM_4h_S79


title: PAM_4h_S78


title: PAM_4h_S76


title: PAM_4h_S77


title: PAM_4h_S75


title: PAM_4h_S73


title: PAM_4h_S72


title: PAM_4h_S71


title: PAM_4h_S70


title: PAM_4h_S68


title: PAM_4h_S66


title: PAM_4h_S67


title: PAM_4h_S89


title: PAM_4h_S65


title: PAM_4h_S64


title: PAM_4h_S59


title: PAM_4h_S82


title: PAM_4h_S62


title: PAM_4h_S61


title: PAM_4h_S57


title: PAM_4h_S53


title: PAM_4h_S54


title: PAM_4h_S58


title: PAM_4h_S48


title: PAM_4h_S52


title: PAM_4h_S50


title: PAM_4h_S56


title: PAM_4h_S47


title: PAM_4h_S55


title: PAM_4h_S46


title: PAM_4h_S44


title: PAM_4h_S69


title: PAM_4h_S42


title: PAM_4h_S41


title: PAM_4h_S40


title: PAM_4h_S38


title: PAM_4h_S39


title: PAM_4h_S35


title: PAM_4h_S30


title: PAM_4h_S28


title: PAM_4h_S51


title: PAM_4h_S29


title: PAM_4h_S27


title: PAM_4h_S25


title: PAM_4h_S24


title: PAM_4h_S26


title: PAM_4h_S23


title: PAM_4h_S22


title: PAM_4h_S18


title: PAM_4h_S17


title: PAM_4h_S45


title: PAM_4h_S15


title: PAM_4h_S13


title: PAM_4h_S16


title: PAM_4h_S12


title: PAM_4h_S7


title: PAM_4h_S31


title: PAM_4h_S9


title: PAM_4h_S4


title: PAM_4h_S14


title: PAM_4h_S3


title: PAM_4h_S1


title: PAM_2h_S96

source_name: BMDC (2h PAM Stimulation)

value: 2h PAM Stimulation


title: PAM_4h_S2


title: PAM_4h_S37


title: PAM_2h_S94


title: PAM_2h_S95


title: PAM_2h_S93


title: PAM_2h_S91


title: PAM_4h_S36


title: PAM_4h_S34


title: PAM_4h_S33


title: PAM_2h_S90


title: PAM_4h_S10


title: PAM_2h_S87


title: PAM_2h_S92


title: PAM_4h_S6


title: PAM_4h_S8


title: PAM_4h_S5


title: PAM_2h_S88


title: PAM_2h_S86


title: PAM_2h_S84


title: PAM_2h_S81


title: PAM_2h_S82


title: PAM_2h_S85


title: PAM_2h_S80


title: PAM_2h_S77


title: PAM_2h_S89


title: PAM_2h_S71


title: PAM_2h_S72


title: PAM_2h_S74


title: PAM_2h_S70


title: PAM_2h_S75


title: PAM_2h_S69


title: PAM_2h_S79


title: PAM_2h_S78


title: PAM_2h_S76


title: PAM_4h_S32


title: PAM_2h_S73


title: PAM_2h_S67


title: PAM_2h_S65


title: PAM_2h_S66


title: PAM_2h_S63


title: PAM_2h_S62


title: PAM_2h_S68


title: PAM_2h_S83


title: PAM_2h_S61


title: PAM_2h_S60


title: PAM_2h_S59


title: PAM_2h_S57


title: PAM_2h_S56


title: PAM_2h_S54


title: PAM_2h_S55


title: PAM_2h_S52


title: PAM_2h_S64


title: PAM_2h_S53


title: PAM_2h_S51


title: PAM_2h_S49


title: PAM_2h_S47


title: PAM_2h_S48


title: PAM_2h_S40


title: PAM_2h_S46


title: PAM_2h_S38


title: PAM_2h_S44


title: PAM_2h_S42


title: PAM_2h_S33


title: PAM_2h_S43


title: PAM_2h_S31


title: PAM_2h_S30


title: PAM_2h_S41


title: PAM_2h_S37


title: PAM_2h_S35


title: PAM_2h_S58


title: PAM_2h_S34


title: PAM_2h_S32


title: PAM_2h_S28


title: PAM_2h_S29


title: PAM_2h_S45


title: PAM_2h_S25


title: PAM_2h_S26


title: PAM_2h_S50


title: PAM_2h_S23


title: PAM_2h_S24


title: PAM_2h_S22


title: PAM_2h_S21


title: PAM_2h_S39


title: PAM_2h_S20


title: PAM_2h_S36


title: PAM_2h_S17


title: PAM_2h_S19


title: PAM_2h_S16


title: PAM_2h_S15


title: PAM_2h_S13


title: PAM_2h_S14


title: PAM_2h_S11


title: PAM_2h_S10


title: PAM_2h_S9


title: PAM_2h_S27


title: PAM_2h_S8


title: PAM_2h_S6


title: PAM_2h_S7


title: PAM_2h_S5


title: PAM_2h_S3


title: PAM_2h_S4


title: PAM_2h_S2


title: PAM_2h_S1


title: PAM_1h_S95

source_name: BMDC (1h PAM Stimulation)

value: 1h PAM Stimulation


title: PAM_1h_S94


title: PAM_1h_S96


title: PAM_1h_S93


title: PAM_1h_S92


title: PAM_2h_S18


title: PAM_1h_S91


title: PAM_1h_S89


title: PAM_1h_S87


title: PAM_1h_S85


title: PAM_1h_S86


title: PAM_1h_S83


title: PAM_2h_S12


title: PAM_1h_S82


title: PAM_1h_S81


title: PAM_1h_S88


title: PAM_1h_S80


title: PAM_1h_S79


title: PAM_1h_S73


title: PAM_1h_S75


title: PAM_1h_S77


title: PAM_1h_S74


title: PAM_1h_S70


title: PAM_1h_S69


title: PAM_1h_S68


title: PAM_1h_S90


title: PAM_1h_S67


title: PAM_1h_S65


title: PAM_1h_S64


title: PAM_1h_S62


title: PAM_1h_S63


title: PAM_1h_S59


title: PAM_1h_S61


title: PAM_1h_S60


title: PAM_1h_S58


title: PAM_1h_S56


title: PAM_1h_S78


title: PAM_1h_S76


title: PAM_1h_S55


title: PAM_1h_S54


title: PAM_1h_S72


title: PAM_1h_S71


title: PAM_1h_S51


title: PAM_1h_S50


title: PAM_1h_S53


title: PAM_1h_S49


title: PAM_1h_S52


title: PAM_1h_S48


title: PAM_1h_S45


title: PAM_1h_S47


title: PAM_1h_S66


title: PAM_1h_S44


title: PAM_1h_S43


title: PAM_1h_S46


title: PAM_1h_S42


title: PAM_1h_S41


title: PAM_1h_S39


title: PAM_1h_S38


title: PAM_1h_S57


title: PAM_1h_S40


title: PAM_1h_S37


title: PAM_1h_S36


title: PAM_1h_S35


title: PAM_1h_S34


title: PAM_1h_S33


title: PAM_1h_S32


title: PAM_1h_S31


title: PAM_1h_S30


title: PAM_1h_S29


title: PAM_1h_S27


title: PAM_1h_S28


title: PAM_1h_S26


title: PAM_1h_S24


title: PAM_1h_S25


title: PAM_1h_S84


title: PAM_1h_S23


title: PAM_1h_S22


title: PAM_1h_S21


title: PAM_1h_S19


title: PAM_1h_S20


title: PAM_1h_S18


title: PAM_1h_S17


title: PAM_1h_S14


title: PAM_1h_S16


title: PAM_1h_S15


title: PAM_1h_S11


title: PAM_1h_S12


title: PAM_1h_S8


title: PAM_1h_S10


title: PAM_1h_S6


title: PAM_1h_S9


title: PAM_1h_S7


title: PAM_1h_S13


title: PAM_1h_S2


title: PAM_1h_S3


title: PAM_1h_S4


title: LPS_4h_Replicate_S95

source_name: BMDC (4h LPS StimulationReplicate Experiment)

value: 4h LPS StimulationReplicate Experiment


title: PAM_1h_S1


title: LPS_4h_Replicate_S94


title: LPS_4h_Replicate_S93


title: LPS_4h_Replicate_S89


title: LPS_4h_Replicate_S90


title: LPS_4h_Replicate_S88


title: LPS_4h_Replicate_S91


title: LPS_4h_Replicate_S86


title: LPS_4h_Replicate_S87


title: LPS_4h_Replicate_S85


title: LPS_4h_Replicate_S83


title: LPS_4h_Replicate_S82


title: LPS_4h_Replicate_S81


title: LPS_4h_Replicate_S84


title: LPS_4h_Replicate_S80


title: PAM_1h_S5


title: LPS_4h_Replicate_S79


title: LPS_4h_Replicate_S77


title: LPS_4h_Replicate_S78


title: LPS_4h_Replicate_S72


title: LPS_4h_Replicate_S74


title: LPS_4h_Replicate_S75


title: LPS_4h_Replicate_S96


title: LPS_4h_Replicate_S73


title: LPS_4h_Replicate_S76


title: LPS_4h_Replicate_S69


title: LPS_4h_Replicate_S92


title: LPS_4h_Replicate_S71


title: LPS_4h_Replicate_S70


title: LPS_4h_Replicate_S67


title: LPS_4h_Replicate_S66


title: LPS_4h_Replicate_S63


title: LPS_4h_Replicate_S65


title: LPS_4h_Replicate_S68


title: LPS_4h_Replicate_S59


title: LPS_4h_Replicate_S58


title: LPS_4h_Replicate_S64


title: LPS_4h_Replicate_S62


title: LPS_4h_Replicate_S54


title: LPS_4h_Replicate_S61


title: LPS_4h_Replicate_S55


title: LPS_4h_Replicate_S60


title: LPS_4h_Replicate_S53


title: LPS_4h_Replicate_S56


title: LPS_4h_Replicate_S57


title: LPS_4h_Replicate_S52


title: LPS_4h_Replicate_S47


title: LPS_4h_Replicate_S49


title: LPS_4h_Replicate_S46


title: LPS_4h_Replicate_S51


title: LPS_4h_Replicate_S42


title: LPS_4h_Replicate_S43


title: LPS_4h_Replicate_S44


title: LPS_4h_Replicate_S41


title: LPS_4h_Replicate_S45


title: LPS_4h_Replicate_S38


title: LPS_4h_Replicate_S40


title: LPS_4h_Replicate_S39


title: LPS_4h_Replicate_S36


title: LPS_4h_Replicate_S37


title: LPS_4h_Replicate_S35


title: LPS_4h_Replicate_S34


title: LPS_4h_Replicate_S33


title: LPS_4h_Replicate_S32


title: LPS_4h_Replicate_S30


title: LPS_4h_Replicate_S27


title: LPS_4h_Replicate_S29


title: LPS_4h_Replicate_S31


title: LPS_4h_Replicate_S48


title: LPS_4h_Replicate_S50


title: LPS_4h_Replicate_S24


title: LPS_4h_Replicate_S26


title: LPS_4h_Replicate_S22


title: LPS_4h_Replicate_S28


title: LPS_4h_Replicate_S23


title: LPS_4h_Replicate_S21


title: LPS_4h_Replicate_S19


title: LPS_4h_Replicate_S20


title: LPS_4h_Replicate_S18


title: LPS_4h_Replicate_S16


title: LPS_4h_Replicate_S17


title: LPS_4h_Replicate_S15


title: LPS_4h_Replicate_S13


title: LPS_4h_Replicate_S12


title: LPS_4h_Replicate_S14


title: LPS_4h_Replicate_S10


title: LPS_4h_Replicate_S9


title: LPS_4h_Replicate_S8


title: LPS_4h_Replicate_S11


title: LPS_4h_Replicate_S25


title: LPS_4h_Replicate_S6


title: LPS_4h_Replicate_S3


title: LPS_4h_Replicate_S5


title: LPS_4h_Replicate_S1


title: LPS_4h_Replicate_S2


title: Unstimulated_S96

source_name: BMDC (Unstimulation)

value: Unstimulation


title: LPS_4h_Replicate_S4


title: Unstimulated_S95


title: Unstimulated_S93


title: Unstimulated_S92


title: Unstimulated_S91


title: Unstimulated_S94


title: Unstimulated_S86


title: Unstimulated_S84


title: Unstimulated_S85


title: Unstimulated_S88


title: Unstimulated_S83


title: Unstimulated_S87


title: Unstimulated_S82


title: Unstimulated_S81


title: Unstimulated_S77


title: Unstimulated_S79


title: Unstimulated_S76


title: LPS_4h_Replicate_S7


title: Unstimulated_S78


title: Unstimulated_S74


title: Unstimulated_S75


title: Unstimulated_S80


title: Unstimulated_S71


title: Unstimulated_S70


title: Unstimulated_S73


title: Unstimulated_S69


title: Unstimulated_S90


title: Unstimulated_S89


title: Unstimulated_S67


title: Unstimulated_S68


title: Unstimulated_S66


title: Unstimulated_S65


title: Unstimulated_S63


title: Unstimulated_S62


title: Unstimulated_S59


title: Unstimulated_S60


title: Unstimulated_S57


title: Unstimulated_S55


title: Unstimulated_S52


title: Unstimulated_S54


title: Unstimulated_S53


title: Unstimulated_S72


title: Unstimulated_S56


title: Unstimulated_S49


title: Unstimulated_S50


title: Unstimulated_S58


title: Unstimulated_S51


title: Unstimulated_S48


title: Unstimulated_S39


title: Unstimulated_S43


title: Unstimulated_S42


title: Unstimulated_S38


title: Unstimulated_S44


title: Unstimulated_S37


title: Unstimulated_S47


title: Unstimulated_S64


title: Unstimulated_S45


title: Unstimulated_S40


title: Unstimulated_S36


title: Unstimulated_S35


title: Unstimulated_S61


title: Unstimulated_S34


title: Unstimulated_S41


title: Unstimulated_S31


title: Unstimulated_S32


title: Unstimulated_S30


title: Unstimulated_S33


title: Unstimulated_S46


title: Unstimulated_S28


title: Unstimulated_S29


title: Unstimulated_S26


title: Unstimulated_S25


title: Unstimulated_S23


title: Unstimulated_S24


title: Unstimulated_S21


title: Unstimulated_S20


title: Unstimulated_S18


title: Unstimulated_S15


title: Unstimulated_S10


title: Unstimulated_S14


title: Unstimulated_S13


title: Unstimulated_S17


title: Unstimulated_S6


title: Unstimulated_S5


title: Unstimulated_S11


title: Unstimulated_S4


title: Unstimulated_S3


title: Unstimulated_S27


title: Unstimulated_S8


title: Unstimulated_S1


title: Unstimulated_S12


title: Unstimulated_S7


title: LPS_6h_S96

source_name: BMDC (6h LPS Stimulation)

value: 6h LPS Stimulation


title: LPS_6h_S94


title: LPS_6h_S93


title: LPS_6h_S95


title: LPS_6h_S91


title: Unstimulated_S22


title: LPS_6h_S90


title: Unstimulated_S19


title: Unstimulated_S16


title: LPS_6h_S88


title: LPS_6h_S89


title: LPS_6h_S85


title: LPS_6h_S82


title: LPS_6h_S83


title: LPS_6h_S80


title: Unstimulated_S9


title: LPS_6h_S71


title: LPS_6h_S68


title: LPS_6h_S87


title: LPS_6h_S86


title: Unstimulated_S2


title: LPS_6h_S81


title: LPS_6h_S84


title: LPS_6h_S76


title: LPS_6h_S75


title: LPS_6h_S63


title: LPS_6h_S77


title: LPS_6h_S62


title: LPS_6h_S72


title: LPS_6h_S92


title: LPS_6h_S61


title: LPS_6h_S73


title: LPS_6h_S69


title: LPS_6h_S70


title: LPS_6h_S79


title: LPS_6h_S67


title: LPS_6h_S66


title: LPS_6h_S64


title: LPS_6h_S56


title: LPS_6h_S60


title: LPS_6h_S58


title: LPS_6h_S78


title: LPS_6h_S55


title: LPS_6h_S74


title: LPS_6h_S57


title: LPS_6h_S54


title: LPS_6h_S65


title: LPS_6h_S46


title: LPS_6h_S44


title: LPS_6h_S43


title: LPS_6h_S52


title: LPS_6h_S53


title: LPS_6h_S51


title: LPS_6h_S42


title: LPS_6h_S59


title: LPS_6h_S38


title: LPS_6h_S50


title: LPS_6h_S39


title: LPS_6h_S49


title: LPS_6h_S48


title: LPS_6h_S47


title: LPS_6h_S45


title: LPS_6h_S37


title: LPS_6h_S40


title: LPS_6h_S34


title: LPS_6h_S35


title: LPS_6h_S33


title: LPS_6h_S36


title: LPS_6h_S32


title: LPS_6h_S29


title: LPS_6h_S28


title: LPS_6h_S30


title: LPS_6h_S27


title: LPS_6h_S26


title: LPS_6h_S41


title: LPS_6h_S24


title: LPS_6h_S23


title: LPS_6h_S22


title: LPS_6h_S19


title: LPS_6h_S18


title: LPS_6h_S17


title: LPS_6h_S15


title: LPS_6h_S16


title: LPS_6h_S13


title: LPS_6h_S14


title: LPS_6h_S12


title: LPS_6h_S11


title: LPS_6h_S9


title: LPS_6h_S31


title: LPS_6h_S8


title: LPS_6h_S7


title: LPS_6h_S4


title: LPS_6h_S5


title: LPS_6h_S2


title: LPS_6h_S6


title: LPS_6h_S25


title: LPS_6h_S3


title: LPS_4h_S95

source_name: BMDC (4h LPS Stimulation)

value: 4h LPS Stimulation


title: LPS_6h_S1


title: LPS_4h_S96


title: LPS_4h_S92


title: LPS_4h_S93


title: LPS_6h_S21


title: LPS_4h_S94


title: LPS_6h_S20


title: LPS_4h_S88


title: LPS_4h_S91


title: LPS_4h_S89


title: LPS_4h_S87


title: LPS_4h_S90


title: LPS_6h_S10


title: LPS_4h_S86


title: LPS_4h_S81


title: LPS_4h_S83


title: LPS_4h_S85


title: LPS_4h_S84


title: LPS_4h_S79


title: LPS_4h_S82


title: LPS_4h_S80


title: LPS_4h_S78


title: LPS_4h_S75


title: LPS_4h_S74


title: LPS_4h_S71


title: LPS_4h_S73


title: LPS_4h_S77


title: LPS_4h_S76


title: LPS_4h_S68


title: LPS_4h_S69


title: LPS_4h_S72


title: LPS_4h_S67


title: LPS_4h_S66


title: LPS_4h_S70


title: LPS_4h_S62


title: LPS_4h_S65


title: LPS_4h_S61


title: LPS_4h_S57


title: LPS_4h_S58


title: LPS_4h_S59


title: LPS_4h_S60


title: LPS_4h_S63


title: LPS_4h_S51


title: LPS_4h_S52


title: LPS_4h_S50


title: LPS_4h_S54


title: LPS_4h_S56


title: LPS_4h_S49


title: LPS_4h_S48


title: LPS_4h_S46


title: LPS_4h_S64


title: LPS_4h_S45


title: LPS_4h_S44


title: LPS_4h_S42


title: LPS_4h_S43


title: LPS_4h_S47


title: LPS_4h_S39


title: LPS_4h_S41


title: LPS_4h_S36


title: LPS_4h_S34


title: LPS_4h_S40


title: LPS_4h_S38


title: LPS_4h_S35


title: LPS_4h_S37


title: LPS_4h_S53


title: LPS_4h_S55


title: LPS_4h_S33


title: LPS_4h_S32


title: LPS_4h_S31


title: LPS_4h_S30


title: LPS_4h_S29


title: LPS_4h_S25


title: LPS_4h_S24


title: LPS_4h_S26


title: LPS_4h_S28


title: LPS_4h_S22


title: LPS_4h_S23


title: LPS_4h_S27


title: LPS_4h_S21


title: LPS_4h_S20


title: LPS_4h_S17


title: LPS_4h_S19


title: LPS_4h_S16


title: LPS_4h_S14


title: LPS_4h_S15


title: LPS_4h_S11


title: LPS_4h_S18


title: LPS_4h_S7


title: LPS_4h_S10


title: LPS_4h_S12


title: LPS_4h_S8


title: LPS_4h_S6


title: LPS_4h_S5


title: LPS_4h_S4


title: LPS_4h_S3


title: LPS_4h_S9


title: LPS_2h_S93

source_name: BMDC (2h LPS Stimulation)

value: 2h LPS Stimulation


title: LPS_4h_S1


title: LPS_2h_S94


title: LPS_2h_S90


title: LPS_2h_S92


title: LPS_2h_S95


title: LPS_2h_S87


title: LPS_2h_S86


title: LPS_2h_S89


title: LPS_2h_S96


title: LPS_2h_S85


title: LPS_2h_S83


title: LPS_2h_S80


title: LPS_2h_S84


title: LPS_2h_S81


title: LPS_2h_S82


title: LPS_2h_S79


title: LPS_2h_S76


title: LPS_2h_S73


title: LPS_2h_S74


title: LPS_2h_S75


title: LPS_4h_S2


title: LPS_2h_S78


title: LPS_2h_S71


title: LPS_2h_S69


title: LPS_2h_S77


title: LPS_2h_S91


title: LPS_2h_S70


title: LPS_2h_S72


title: LPS_2h_S88


title: LPS_2h_S63


title: LPS_2h_S64


title: LPS_2h_S66


title: LPS_2h_S62


title: LPS_2h_S65


title: LPS_2h_S60


title: LPS_2h_S68


title: LPS_2h_S61


title: LPS_2h_S67


title: LPS_2h_S59


title: LPS_2h_S57


title: LPS_2h_S58


title: LPS_2h_S56


title: LPS_2h_S52


title: LPS_2h_S54


title: LPS_2h_S50


title: LPS_2h_S55


title: LPS_2h_S49


title: LPS_2h_S48


title: LPS_2h_S42


title: LPS_2h_S43


title: LPS_2h_S44


title: LPS_2h_S45


title: LPS_2h_S47


title: LPS_2h_S39


title: LPS_2h_S40


title: LPS_2h_S41


title: LPS_2h_S35


title: LPS_2h_S36


title: LPS_2h_S38


title: LPS_2h_S33


title: LPS_2h_S31


title: LPS_2h_S34


title: LPS_2h_S29


title: LPS_2h_S53


title: LPS_2h_S32


title: LPS_2h_S30


title: LPS_2h_S46


title: LPS_2h_S28


title: LPS_2h_S51


title: LPS_2h_S23


title: LPS_2h_S22


title: LPS_2h_S26


title: LPS_2h_S25


title: LPS_2h_S21


title: LPS_2h_S24


title: LPS_2h_S17


title: LPS_2h_S20


title: LPS_2h_S18


title: LPS_2h_S19


title: LPS_2h_S16


title: LPS_2h_S14


title: LPS_2h_S37


title: LPS_2h_S12


title: LPS_2h_S15


title: LPS_2h_S13


title: LPS_2h_S11


title: LPS_2h_S6


title: LPS_2h_S10


title: LPS_2h_S8


title: LPS_2h_S9


title: LPS_2h_S27


title: LPS_2h_S2


title: LPS_2h_S4


title: LPS_2h_S3


title: LPS_1h_S92

source_name: BMDC (1h LPS Stimulation)

value: 1h LPS Stimulation


title: LPS_2h_S1

value: BMDC


title: LPS_1h_S94


title: LPS_1h_S90


title: LPS_1h_S93


title: LPS_1h_S95


title: LPS_1h_S89


title: LPS_1h_S96


title: LPS_1h_S88


title: LPS_1h_S87


title: LPS_1h_S91


title: LPS_1h_S84


title: LPS_1h_S85


title: LPS_1h_S83


title: LPS_2h_S5


title: LPS_1h_S82


title: LPS_1h_S81


title: LPS_1h_S79


title: LPS_1h_S75


title: LPS_1h_S77


title: LPS_1h_S80


title: LPS_1h_S72


title: LPS_1h_S76


title: LPS_2h_S7


title: LPS_1h_S78


title: LPS_1h_S73


title: LPS_1h_S71


title: LPS_1h_S66


title: LPS_1h_S74


title: LPS_1h_S68


title: LPS_1h_S86


title: LPS_1h_S64


title: LPS_1h_S62


title: LPS_1h_S59


title: LPS_1h_S61


title: LPS_1h_S58


title: LPS_1h_S57


title: LPS_1h_S60


title: LPS_1h_S56


title: LPS_1h_S70


title: LPS_1h_S53


title: LPS_1h_S55


title: LPS_1h_S54


title: LPS_1h_S50


title: LPS_1h_S49


title: LPS_1h_S48


title: LPS_1h_S52


title: LPS_1h_S44


title: LPS_1h_S46


title: LPS_1h_S69


title: LPS_1h_S67


title: LPS_1h_S43


title: LPS_1h_S45


title: LPS_1h_S63


title: LPS_1h_S65


title: LPS_1h_S41


title: LPS_1h_S39


title: LPS_1h_S40


title: LPS_1h_S38


title: LPS_1h_S37


title: LPS_1h_S35


title: LPS_1h_S33


title: LPS_1h_S34


title: LPS_1h_S31


title: LPS_1h_S32


title: LPS_1h_S51


title: LPS_1h_S30


title: LPS_1h_S28


title: LPS_1h_S27


title: LPS_1h_S26


title: LPS_1h_S29


title: LPS_1h_S24


title: LPS_1h_S47


title: LPS_1h_S22


title: LPS_1h_S19


title: LPS_1h_S18


title: LPS_1h_S21


title: LPS_1h_S17


title: LPS_1h_S25


title: LPS_1h_S23


title: LPS_4h_Tenth_S89

description: LPS 4h 0.1X Stim

data_processing:
We created a Bowtie index based on the UCSC knownGene (8) transcriptome, and aligned paired-end reads directly to this index using Bowtie v 0.12.7 with command line options -q --phred33-quals -n 2 -e 99999999 -l 25 -I 1 -X 1000 -a -m 200.
Next, we ran RSEM v1.11 with default parameters on these alignments to estimate expression levels. RSEM’s gene level expression estimates (tau) were multiplied by 1,000,000 to obtain transcript per million (TPM) estimates for each gene.
Multiple steps were taken to identify and remove these negative controls, as well as other low quality libraries (for example, those from dead or poorly-lysed cells). First, a classifier was built based on gene expression estimates from all libraries, including all negative controls. Gene expression estimates from a C1 run (LPS 4h dataset) were examined and compared with our cell capture images. The top 40 genes that were over-expressed most significantly in the negative control libraries (typically, genes containing highly repetitive sequences) were identified, as well as the top 40 genes most significantly underrepresented in these libraries (typically, housekeeping genes, as well as highly expressed immune response transcripts). Expression estimates for these 80 genes were used to train a supervised SVM classifier, implemented in the e1071 package in R9, to discriminate these negative controls. This classifier provides a numerical score (between 0 and 1, a ‘failure score’) for each cell, corresponding to a predicted probability that any individual experiment failed. This classifier was then applied to calculate scores for all experiments in all datasets. ‘Failure scores’ across all single cells fell into two peaks, corresponding to successful and unsuccessful experiments) and all cells with a ‘failure score’ greater than 0.4 were removed from all further analyses. Finally, any libraries consisting of less than 1 million reads were also excluded, as well as all libraries with a lower than 15% transcriptomic alignment rate.
Genome_build: mm9
Supplementary_files_format_and_content: matrix of gene expression estimates across good quality samples

source_name: Bone Marrow Dendritic Cells

extract_protocol:
cDNA from each sample was prepared using the SMARTer cDNA synthesis (Clontech).
RNA libraries were prepared for sequencing using Nextera XT (Illumina).

value: LPS 4h 0.1X Stim


title: LPS_1h_S42


title: LPS_4h_Tenth_S8

description: LPS 4h 0.1X Stim


title: LPS_1h_S36


title: LPS_1h_S20


title: LPS_1h_S15


title: LPS_4h_Tenth_S81

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S85

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S80

description: LPS 4h 0.1X Stim


title: LPS_1h_S14


title: LPS_4h_Tenth_S7

description: LPS 4h 0.1X Stim


title: LPS_1h_S13


title: LPS_1h_S12


title: LPS_1h_S11


title: LPS_4h_Tenth_S79

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S77

description: LPS 4h 0.1X Stim


title: LPS_1h_S10


title: LPS_4h_Tenth_S75

description: LPS 4h 0.1X Stim


title: LPS_1h_S9


title: LPS_1h_S8


title: LPS_1h_S6


title: LPS_4h_Tenth_S73

description: LPS 4h 0.1X Stim


title: LPS_1h_S5


title: LPS_4h_Tenth_S71

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S69

description: LPS 4h 0.1X Stim


title: LPS_1h_S7


title: LPS_4h_Tenth_S6

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S65

description: LPS 4h 0.1X Stim


title: LPS_1h_S16


title: LPS_4h_Tenth_S66

description: LPS 4h 0.1X Stim


title: LPS_1h_S2


title: LPS_4h_Tenth_S70

description: LPS 4h 0.1X Stim


title: LPS_1h_S3


title: LPS_1h_S1


title: Unstimulated_Replicate_S96

source_name: BMDC (Unstimulated Replicate Experiment)

value: Unstimulated Replicate Experiment


title: Unstimulated_Replicate_S95


title: LPS_4h_Tenth_S63

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S94


title: LPS_4h_Tenth_S61

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S93


title: LPS_4h_Tenth_S57

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S92


title: LPS_1h_S4


title: Unstimulated_Replicate_S91


title: LPS_4h_Tenth_S68

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S89


title: LPS_4h_Tenth_S54

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S88


title: LPS_4h_Tenth_S43

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S64

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S87


title: LPS_4h_Tenth_S74

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S86


title: LPS_4h_Tenth_S50

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S52

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S42

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S84


title: Unstimulated_Replicate_S85


title: LPS_4h_Tenth_S38

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S3

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S83


title: LPS_4h_Tenth_S35

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S82


title: LPS_4h_Tenth_S34

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S81


title: LPS_4h_Tenth_S58

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S33

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S80


title: LPS_4h_Tenth_S55

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S79


title: LPS_4h_Tenth_S32

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S90


title: LPS_4h_Tenth_S2

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S78


title: LPS_4h_Tenth_S29

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S28

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S77


title: Unstimulated_Replicate_S75


title: LPS_4h_Tenth_S27

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S26

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S74


title: Unstimulated_Replicate_S76


title: Unstimulated_Replicate_S73


title: Unstimulated_Replicate_S72


title: LPS_4h_Tenth_S23

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S25

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S22

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S24

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S71


title: LPS_4h_Tenth_S14

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S70


title: Unstimulated_Replicate_S67


title: Unstimulated_Replicate_S69


title: LPS_4h_Tenth_S20

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S17

description: LPS 4h 0.1X Stim


title: LPS_4h_Tenth_S13

description: LPS 4h 0.1X Stim


title: LPS_2h_Technical_Replicate_2_S95

description: LPS 2h 2 TechRep

value: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S96

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S64


title: Unstimulated_Replicate_S66


title: Unstimulated_Replicate_S65


title: Unstimulated_Replicate_S63


title: LPS_2h_Technical_Replicate_2_S94

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S62


title: LPS_2h_Technical_Replicate_2_S91

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S92

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S61


title: LPS_4h_Tenth_S19

description: LPS 4h 0.1X Stim


title: Unstimulated_Replicate_S58


title: LPS_2h_Technical_Replicate_2_S87

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S8

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S90

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S57


title: Unstimulated_Replicate_S59


title: Unstimulated_Replicate_S55


title: LPS_2h_Technical_Replicate_2_S84

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S83

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S60


title: Unstimulated_Replicate_S54


title: Unstimulated_Replicate_S53


title: LPS_2h_Technical_Replicate_2_S82

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S56


title: LPS_2h_Technical_Replicate_2_S85

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S86

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S81

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S52


title: LPS_2h_Technical_Replicate_2_S7

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S50


title: Unstimulated_Replicate_S51


title: LPS_2h_Technical_Replicate_2_S79

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S49


title: LPS_2h_Technical_Replicate_2_S77

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S48


title: LPS_2h_Technical_Replicate_2_S75

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S74

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S47


title: Unstimulated_Replicate_S46


title: LPS_2h_Technical_Replicate_2_S72

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S45


title: LPS_2h_Technical_Replicate_2_S71

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S43


title: Unstimulated_Replicate_S42


title: LPS_2h_Technical_Replicate_2_S70

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S68

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S64

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S39


title: Unstimulated_Replicate_S41


title: Unstimulated_Replicate_S40


title: Unstimulated_Replicate_S68


title: LPS_2h_Technical_Replicate_2_S63

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S61

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S38


title: Unstimulated_Replicate_S37


title: Unstimulated_Replicate_S36


title: Unstimulated_Replicate_S35


title: LPS_2h_Technical_Replicate_2_S5

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S59

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S69

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S34


title: LPS_2h_Technical_Replicate_2_S57

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S58

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S32


title: Unstimulated_Replicate_S30


title: Unstimulated_Replicate_S31


title: LPS_2h_Technical_Replicate_2_S56

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S6

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S44


title: LPS_2h_Technical_Replicate_2_S55

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S67

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S29


title: Unstimulated_Replicate_S26


title: LPS_2h_Technical_Replicate_2_S50

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S51

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S54

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S28


title: Unstimulated_Replicate_S27


title: LPS_2h_Technical_Replicate_2_S53

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S24


title: LPS_2h_Technical_Replicate_2_S47

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S45

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S46

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S22


title: Unstimulated_Replicate_S23


title: Unstimulated_Replicate_S33


title: Unstimulated_Replicate_S21


title: Unstimulated_Replicate_S20


title: LPS_2h_Technical_Replicate_2_S43

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S25


title: LPS_2h_Technical_Replicate_2_S49

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S16


title: Unstimulated_Replicate_S17


title: LPS_2h_Technical_Replicate_2_S37

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S19


title: LPS_2h_Technical_Replicate_2_S3

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S36

description: LPS 2h 2 TechRep


title: LPS_2h_Technical_Replicate_2_S38

description: LPS 2h 2 TechRep


title: Unstimulated_Replicate_S18


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description: LPS 4h 1 TechRep


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description: LPS 4h 1 TechRep


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description: LPS 4h 1 TechRep


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title: snf2-null - nucleosomes 1

city: Bethesda

first: David

middle: Johannes

last: Clark

state: MD

address: 6 Center Drive Bldg 6A Rm 2A02

department: DDB

institute: NICHD, NIH

description: Biological replicate 1

data_processing:
Nucleosome sequences were aligned to the yeast genome (SacCer2) using Bowtie2.
Nucleosome occupancy maps were created using programs described by Cole et al. (2011) Nucleic Acids Res. 39, 9521-9535. The processed data were converted to the bigwig files supplied here.

organism: Saccharomyces cerevisiae

source_name: Saccharomyces cerevisiae

growth_protocol: All strains were grown to mid-log phase (OD600 about 0.8) at 30 degC in synthetic complete medium, except MCY3860, which was grown in galactose and then switched to glucose, in which it arrested at OD ~ 0.8 (due to depletion of the essential Rsc8/Swh3 protein)

extract_protocol:
Nuclei were digested with micrococcal nuclease. Mono-nucleosomal DNA was gel-purified.
The DNA was repaired using the DNA repair kit from New England Biolabs. The repaired DNA was processed for paired-end sequencing according to the Illumina protocol.

value: MATa ade2-1 can1-100 HIS3 leu2-3,112 trp1-1 ura3-1 RAD5+ ISW1-FL3-KanMX snf2-delta::URA3


title: snf2-null - nucleosomes 2

description: Biological replicate 2

tag: tag


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description: LPS4h, GolgiPlug 2h


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description: LPS4h, GolgiPlug 2h


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description: LPS4h, GolgiPlug 2h


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description: LPS4h, GolgiPlug 2h


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description: LPS4h, GolgiPlug 2h


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description: LPS4h, GolgiPlug 2h


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description: LPS4h, GolgiPlug 2h


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description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_2h_S30

description: LPS4h, GolgiPlug 2h


title: LPS_4h_Technical_Replicate_1_S40

description: LPS 4h 1 TechRep


title: LPS_4h_GolgiPlug_2h_S21

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_2h_S1

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_2h_S22

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_2h_S15

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_2h_S12

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_1h_S91

description: LPS4h, GolgiPlug 1h

value: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S95

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S96

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S86

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_2h_S39

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_1h_S87

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S85

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_2h_S36

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_1h_S84

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S79

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_2h_S29

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_1h_S81

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S78

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S76

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S83

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S73

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S74

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S75

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_2h_S16

description: LPS4h, GolgiPlug 2h


title: LPS_4h_GolgiPlug_1h_S62

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S65

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S57

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S60

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S55

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S59

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S69

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S72

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S67

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S88

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S50

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S52

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S47

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S48

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S45

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S51

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S42

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S39

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S41

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S3

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S38

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S35

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S40

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S32

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S28

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S31

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S27

description: LPS4h, GolgiPlug 1h


title: LPS_4h_GolgiPlug_1h_S21

description: LPS4h, GolgiPlug 1h


title: Ifnar1_KO_LPS_2h_S8

description: IFNAR-/-, LPS, 2h Stimulation

value: LPS, 2h Stimulation

tag: genotype


title: Ifnar1_KO_LPS_2h_S9

description: IFNAR-/-, LPS, 2h Stimulation


title: LPS_4h_GolgiPlug_1h_S17

description: LPS4h, GolgiPlug 1h


title: Ifnar1_KO_LPS_2h_S84

description: IFNAR-/-, LPS, 2h Stimulation


title: LPS_4h_GolgiPlug_1h_S23

description: LPS4h, GolgiPlug 1h


title: Ifnar1_KO_LPS_2h_S85

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S90

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S89

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S95

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S86

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S79

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S80

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S76

description: IFNAR-/-, LPS, 2h Stimulation


title: LPS_4h_GolgiPlug_1h_S44

description: LPS4h, GolgiPlug 1h


title: Ifnar1_KO_LPS_2h_S75

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S81

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S68

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S6

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S70

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S66

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S62

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S65

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S61

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S74

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S94

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S60

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S71

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S5

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S54

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S53

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S56

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S51

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S57

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S44

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S43

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S49

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S47

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S45

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S46

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S67

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S77

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S41

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S40

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S3

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S36

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S38

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S39

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S30

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S33

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S2

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S27

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S35

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S31

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S26

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S29

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S25

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S4

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S20

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S16

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S1

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S18

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S24

description: IFNAR-/-, LPS, 2h Stimulation


title: Ifnar1_KO_LPS_2h_S15

description: IFNAR-/-, LPS, 2h Stimulation


title: On_Chip_Unstim_S94

description: On Chip 4h, No Stimulation

value: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S9

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S95

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S92

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S93

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S91

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S90

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S86

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S82

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S73

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S68

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S63

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S5

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S59

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S58

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S55

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S48

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S50

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S47

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S40

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S44

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S39

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S38

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S32

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S29

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S27

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S26

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S77

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S25

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S79

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S19

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S16

description: On Chip 4h, No Stimulation


title: LPS_4h_GolgiPlug_0h_S9

description: LPS4h, GolgiPlug 0h

value: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S95

description: LPS4h, GolgiPlug 0h


title: Ifnar1_KO_LPS_2h_S11

description: IFNAR-/-, LPS, 2h Stimulation


title: On_Chip_Unstim_S13

description: On Chip 4h, No Stimulation


title: LPS_4h_GolgiPlug_0h_S88

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S93

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S86

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S87

description: LPS4h, GolgiPlug 0h


title: On_Chip_Unstim_S54

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S75

description: On Chip 4h, No Stimulation


title: LPS_4h_GolgiPlug_0h_S7

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S83

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S82

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S84

description: LPS4h, GolgiPlug 0h


title: On_Chip_Unstim_S80

description: On Chip 4h, No Stimulation


title: On_Chip_Unstim_S3

description: On Chip 4h, No Stimulation


title: LPS_4h_GolgiPlug_0h_S73

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S75

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S71

description: LPS4h, GolgiPlug 0h


title: On_Chip_Unstim_S28

description: On Chip 4h, No Stimulation


title: LPS_4h_GolgiPlug_0h_S72

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S69

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S56

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S58

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S85

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S5

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S67

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S6

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S63

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S66

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S55

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S77

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S54

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S61

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S65

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S50

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S52

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S51

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S68

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S49

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S47

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S43

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S46

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S42

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S40

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S48

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S38

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S36

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S28

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S25

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S27

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S19

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S70

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S13

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S16

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S18

description: LPS4h, GolgiPlug 0h


title: Tnfr_KO_LPS_4h_S95

source_name: BMDC (Tnfrsf1a-/- x Tnfrsf1b-/-, 4h LPS stimulation)


title: LPS_4h_GolgiPlug_0h_S20

description: LPS4h, GolgiPlug 0h


title: Tnfr_KO_LPS_4h_S93

value: Tnfrsf1a-/- x Tnfrsf1b-/-, 4h LPS stimulation


title: Tnfr_KO_LPS_4h_S90


title: Tnfr_KO_LPS_4h_S91


title: Tnfr_KO_LPS_4h_S88


title: Tnfr_KO_LPS_4h_S84


title: Tnfr_KO_LPS_4h_S83


title: LPS_4h_GolgiPlug_0h_S37

description: LPS4h, GolgiPlug 0h


title: Tnfr_KO_LPS_4h_S86


title: Tnfr_KO_LPS_4h_S87


title: Tnfr_KO_LPS_4h_S94


title: Tnfr_KO_LPS_4h_S89


title: Tnfr_KO_LPS_4h_S82


title: LPS_4h_GolgiPlug_0h_S17

description: LPS4h, GolgiPlug 0h


title: Tnfr_KO_LPS_4h_S96


title: LPS_4h_GolgiPlug_0h_S10

description: LPS4h, GolgiPlug 0h


title: Tnfr_KO_LPS_4h_S80


title: Tnfr_KO_LPS_4h_S79


title: Tnfr_KO_LPS_4h_S78


title: Tnfr_KO_LPS_4h_S77


title: Tnfr_KO_LPS_4h_S75


title: Tnfr_KO_LPS_4h_S81


title: Tnfr_KO_LPS_4h_S73


title: Tnfr_KO_LPS_4h_S76


title: LPS_4h_GolgiPlug_0h_S29

description: LPS4h, GolgiPlug 0h


title: LPS_4h_GolgiPlug_0h_S14

description: LPS4h, GolgiPlug 0h


title: Tnfr_KO_LPS_4h_S85


title: Tnfr_KO_LPS_4h_S68


title: Tnfr_KO_LPS_4h_S71


title: Tnfr_KO_LPS_4h_S72


title: Tnfr_KO_LPS_4h_S65


title: Tnfr_KO_LPS_4h_S60


title: Tnfr_KO_LPS_4h_S70


title: Tnfr_KO_LPS_4h_S63


title: Tnfr_KO_LPS_4h_S62


title: Tnfr_KO_LPS_4h_S67


title: Tnfr_KO_LPS_4h_S64


title: Tnfr_KO_LPS_4h_S56


title: Tnfr_KO_LPS_4h_S58


title: Tnfr_KO_LPS_4h_S55


title: Tnfr_KO_LPS_4h_S69


title: Tnfr_KO_LPS_4h_S59


title: Tnfr_KO_LPS_4h_S52


title: Tnfr_KO_LPS_4h_S53


title: Tnfr_KO_LPS_4h_S51


title: Tnfr_KO_LPS_4h_S57


title: Tnfr_KO_LPS_4h_S54


title: Tnfr_KO_LPS_4h_S74


title: Tnfr_KO_LPS_4h_S49


title: Tnfr_KO_LPS_4h_S48


title: Tnfr_KO_LPS_4h_S50


title: Tnfr_KO_LPS_4h_S47


title: Tnfr_KO_LPS_4h_S61


title: Tnfr_KO_LPS_4h_S66


title: Tnfr_KO_LPS_4h_S43


title: Tnfr_KO_LPS_4h_S46


title: Tnfr_KO_LPS_4h_S42


title: Tnfr_KO_LPS_4h_S45


title: Tnfr_KO_LPS_4h_S44


title: Tnfr_KO_LPS_4h_S41


title: Tnfr_KO_LPS_4h_S40


title: Tnfr_KO_LPS_4h_S39


title: Tnfr_KO_LPS_4h_S36


title: Tnfr_KO_LPS_4h_S37


title: Tnfr_KO_LPS_4h_S35


title: Tnfr_KO_LPS_4h_S38


title: Tnfr_KO_LPS_4h_S31


title: Tnfr_KO_LPS_4h_S33


title: Tnfr_KO_LPS_4h_S34


title: Tnfr_KO_LPS_4h_S29


title: Tnfr_KO_LPS_4h_S32


title: Tnfr_KO_LPS_4h_S27


title: Tnfr_KO_LPS_4h_S26


title: Tnfr_KO_LPS_4h_S28


title: Tnfr_KO_LPS_4h_S25


title: Tnfr_KO_LPS_4h_S22


title: Tnfr_KO_LPS_4h_S30


title: Tnfr_KO_LPS_4h_S24


title: Tnfr_KO_LPS_4h_S23


title: Tnfr_KO_LPS_4h_S20


title: Tnfr_KO_LPS_4h_S19


title: Tnfr_KO_LPS_4h_S18


title: Tnfr_KO_LPS_4h_S14


title: Tnfr_KO_LPS_4h_S16


title: Tnfr_KO_LPS_4h_S17


title: Tnfr_KO_LPS_4h_S13


title: Tnfr_KO_LPS_4h_S11


title: Tnfr_KO_LPS_4h_S15


title: Tnfr_KO_LPS_4h_S10


title: Tnfr_KO_LPS_4h_S12


title: Tnfr_KO_LPS_4h_S9


title: Tnfr_KO_LPS_4h_S3


title: Tnfr_KO_LPS_4h_S6


title: Tnfr_KO_LPS_4h_S5


title: Tnfr_KO_LPS_4h_S2


title: Tnfr_KO_LPS_4h_S7


title: Stat1_KO_LPS_4h_S94

source_name: BMDC (Stat1-/-, 4h LPS stimulation)

value: Stat1-/-, 4h LPS stimulation


title: Stat1_KO_LPS_4h_S95


title: Tnfr_KO_LPS_4h_S4


title: Tnfr_KO_LPS_4h_S8


title: Stat1_KO_LPS_4h_S92


title: Tnfr_KO_LPS_4h_S1


title: Tnfr_KO_LPS_4h_S21


title: Stat1_KO_LPS_4h_S91


title: Stat1_KO_LPS_4h_S96


title: Stat1_KO_LPS_4h_S89


title: Stat1_KO_LPS_4h_S88


title: Stat1_KO_LPS_4h_S90


title: Stat1_KO_LPS_4h_S87


title: Stat1_KO_LPS_4h_S85


title: Stat1_KO_LPS_4h_S82


title: Stat1_KO_LPS_4h_S84


title: Stat1_KO_LPS_4h_S80


title: Stat1_KO_LPS_4h_S83


title: Stat1_KO_LPS_4h_S76


title: Stat1_KO_LPS_4h_S77


title: Stat1_KO_LPS_4h_S73


title: Stat1_KO_LPS_4h_S74


title: Stat1_KO_LPS_4h_S75


title: Stat1_KO_LPS_4h_S69


title: Stat1_KO_LPS_4h_S71


title: Stat1_KO_LPS_4h_S68


title: Stat1_KO_LPS_4h_S81


title: Stat1_KO_LPS_4h_S66


title: Stat1_KO_LPS_4h_S67


title: Stat1_KO_LPS_4h_S70


title: Stat1_KO_LPS_4h_S72


title: Stat1_KO_LPS_4h_S65


title: Stat1_KO_LPS_4h_S64


title: Stat1_KO_LPS_4h_S63


title: Stat1_KO_LPS_4h_S86


title: Tnfr_KO_LPS_4h_S92


title: Stat1_KO_LPS_4h_S61


title: Stat1_KO_LPS_4h_S60


title: Stat1_KO_LPS_4h_S79


title: Stat1_KO_LPS_4h_S59


title: Stat1_KO_LPS_4h_S55


title: Stat1_KO_LPS_4h_S56


title: Stat1_KO_LPS_4h_S54


title: Stat1_KO_LPS_4h_S57


title: Stat1_KO_LPS_4h_S53


title: Stat1_KO_LPS_4h_S52


title: Stat1_KO_LPS_4h_S78


title: Stat1_KO_LPS_4h_S46


title: Stat1_KO_LPS_4h_S44


title: Stat1_KO_LPS_4h_S51


title: Stat1_KO_LPS_4h_S42


title: Stat1_KO_LPS_4h_S43


title: Stat1_KO_LPS_4h_S48


title: Stat1_KO_LPS_4h_S45


title: Stat1_KO_LPS_4h_S93


title: Stat1_KO_LPS_4h_S41


title: Stat1_KO_LPS_4h_S38


title: Stat1_KO_LPS_4h_S62


title: Stat1_KO_LPS_4h_S40


title: Stat1_KO_LPS_4h_S37


title: Stat1_KO_LPS_4h_S36


title: Stat1_KO_LPS_4h_S33


title: Stat1_KO_LPS_4h_S39


title: Stat1_KO_LPS_4h_S34


title: Stat1_KO_LPS_4h_S32


title: Stat1_KO_LPS_4h_S35


title: Stat1_KO_LPS_4h_S30


title: Stat1_KO_LPS_4h_S29


title: Stat1_KO_LPS_4h_S31


title: Stat1_KO_LPS_4h_S49


title: Stat1_KO_LPS_4h_S26


title: Stat1_KO_LPS_4h_S47


title: Stat1_KO_LPS_4h_S27


title: Stat1_KO_LPS_4h_S28


title: Stat1_KO_LPS_4h_S25


title: Stat1_KO_LPS_4h_S23


title: Stat1_KO_LPS_4h_S22


title: Stat1_KO_LPS_4h_S20


title: Stat1_KO_LPS_4h_S19


title: Stat1_KO_LPS_4h_S18


title: Stat1_KO_LPS_4h_S16


title: Stat1_KO_LPS_4h_S21


title: Stat1_KO_LPS_4h_S17


title: Stat1_KO_LPS_4h_S15


title: Stat1_KO_LPS_4h_S12


title: Stat1_KO_LPS_4h_S14


title: Stat1_KO_LPS_4h_S13


title: Stat1_KO_LPS_4h_S11


title: Stat1_KO_LPS_4h_S10


title: Stat1_KO_LPS_4h_S9


title: Stat1_KO_LPS_4h_S8


title: Stat1_KO_LPS_4h_S7


title: Stat1_KO_LPS_4h_S4


title: Stat1_KO_LPS_4h_S3


title: Stat1_KO_LPS_4h_S2


title: Ifnar1_KO_LPS_4h_S96

source_name: BMDC (Ifnar1-/-, 4h LPS stimulation)

value: Ifnar1-/-, 4h LPS stimulation


title: Ifnar1_KO_LPS_4h_S95


title: Stat1_KO_LPS_4h_S5


title: Stat1_KO_LPS_4h_S1


title: Ifnar1_KO_LPS_4h_S92


title: Stat1_KO_LPS_4h_S24


title: Ifnar1_KO_LPS_4h_S91


title: Ifnar1_KO_LPS_4h_S94


title: Ifnar1_KO_LPS_4h_S90


title: Ifnar1_KO_LPS_4h_S89


title: Ifnar1_KO_LPS_4h_S84


title: Ifnar1_KO_LPS_4h_S88


title: LPS_4h_GolgiPlug_0h_S32

description: LPS4h, GolgiPlug 0h


title: Ifnar1_KO_LPS_4h_S85


title: Ifnar1_KO_LPS_4h_S83


title: Ifnar1_KO_LPS_4h_S86


title: Ifnar1_KO_LPS_4h_S87


title: Ifnar1_KO_LPS_4h_S80


title: Ifnar1_KO_LPS_4h_S78


title: Ifnar1_KO_LPS_4h_S79


title: Ifnar1_KO_LPS_4h_S81


title: Ifnar1_KO_LPS_4h_S82


title: Ifnar1_KO_LPS_4h_S77


title: Ifnar1_KO_LPS_4h_S73


title: Ifnar1_KO_LPS_4h_S76


title: Ifnar1_KO_LPS_4h_S72


title: Ifnar1_KO_LPS_4h_S75


title: Ifnar1_KO_LPS_4h_S93


title: Ifnar1_KO_LPS_4h_S74


title: Ifnar1_KO_LPS_4h_S71


title: Ifnar1_KO_LPS_4h_S67


title: Ifnar1_KO_LPS_4h_S65


title: Ifnar1_KO_LPS_4h_S66


title: Ifnar1_KO_LPS_4h_S68


title: Ifnar1_KO_LPS_4h_S69


title: Ifnar1_KO_LPS_4h_S70


title: Ifnar1_KO_LPS_4h_S63


title: Ifnar1_KO_LPS_4h_S64


title: Ifnar1_KO_LPS_4h_S62


title: Ifnar1_KO_LPS_4h_S61


title: Ifnar1_KO_LPS_4h_S56


title: Ifnar1_KO_LPS_4h_S59


title: Ifnar1_KO_LPS_4h_S57


title: Ifnar1_KO_LPS_4h_S60


title: Ifnar1_KO_LPS_4h_S58


title: Ifnar1_KO_LPS_4h_S55


title: Ifnar1_KO_LPS_4h_S51


title: Ifnar1_KO_LPS_4h_S54