title: ChIP-seq from forebrain (ENCLB641MQG)

description:
https://www.encodeproject.org/experiments/ENCSR894JAS/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K9me3 ChIP-seq on embryonic 11.5 day mouse forebrain
experiment encode accession: ENCSR894JAS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR024JAN
encode release date: 2016-03-16
lab: Bing Ren, UCSD
library encode accession: ENCLB641MQG
size range: 300-500

value: Forebrain from 88 embyronic 11.5 day mice

value: ENCBS720JOH at ENCODE; https://www.encodeproject.org/ENCBS720JOH/


title: ChIP-seq from intestine (ENCLB536GUT)

status: Public on Jun 22 2016

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR898PML/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse intestine
experiment encode accession: ENCSR898PML
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB536GUT
size range: 300-500

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Mus musculus

source_name: Mus musculus strain B6NTac;B6NCrl/Lap intestine tissue mixed sex postnatal (0 days)

tag: antibody

value: Control

value: intestine

value: tissue

tag: description

value: Intestine from pooled postnatal 0 day mice

tag: biosample encode accession

tag: age

value: 0 day

tag: dev stage

value: postnatal

tag: Sex

value: pooled male and female

tag: health state

value: healthy

tag: lab

value: Len Pennacchio, LBNL

tag: link

value: ENCBS560AAA at ENCODE; https://www.encodeproject.org/ENCBS560AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from midbrain (ENCLB737NTS)

description:
https://www.encodeproject.org/experiments/ENCSR889XXJ/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse midbrain
experiment encode accession: ENCSR889XXJ
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB737NTS
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue mixed sex postnatal (0 days)

value: midbrain

value: Midbrain from 15 postnatal 0 day mice

value: ENCBS039AAA at ENCODE; https://www.encodeproject.org/ENCBS039AAA/


title: ChIP-seq from midbrain (ENCLB773IBV)

description:
https://www.encodeproject.org/experiments/ENCSR889XXJ/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on postnatal 0 day mouse midbrain
experiment encode accession: ENCSR889XXJ
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB773IBV
size range: 300-500

value: Midbrain from pooled postnatal 0 day mice

value: ENCBS555AAA at ENCODE; https://www.encodeproject.org/ENCBS555AAA/


title: ChIP-seq from lung (ENCLB282FLB)

description:
https://www.encodeproject.org/experiments/ENCSR924FJQ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse lung
experiment encode accession: ENCSR924FJQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR280SYC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB282FLB
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap lung tissue mixed sex embryo (14.5 days)

value: lung

value: Lung from 34 embryonic 14.5 day mice

value: embryonic

value: ENCBS018AAA at ENCODE; https://www.encodeproject.org/ENCBS018AAA/


title: ChIP-seq from intestine (ENCLB041EBO)

description:
https://www.encodeproject.org/experiments/ENCSR872UEE/
***************
biological replicate number: 2
technical replicate number: 1,3,2
description: Control ChIP-seq on embryonic 15.5 day mouse intestine
experiment encode accession: ENCSR872UEE
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB041EBO
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 4000

source_name: Mus musculus strain B6NCrl intestine tissue mixed sex embryo (15.5 days)

value: Control

value: intestine

value: tissue

value: Intestine from 62 embryonic 15.5 day mice

value: ENCBS836WEU at ENCODE; https://www.encodeproject.org/ENCBS836WEU/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB257VYX)

description:
https://www.encodeproject.org/experiments/ENCSR875ZAO/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on postnatal 0 day mouse heart
experiment encode accession: ENCSR875ZAO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR334IOH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB257VYX
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex postnatal (0 days)

value: heart

value: Heart from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS557AAA at ENCODE; https://www.encodeproject.org/ENCBS557AAA/


title: ChIP-seq from forebrain (ENCLB475DBV)

description:
https://www.encodeproject.org/experiments/ENCSR875KRK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse forebrain
experiment encode accession: ENCSR875KRK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR880HDV
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB475DBV
size range: 300-500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (15.5 days)

value: forebrain

value: Forebrain from 78 embryonic 15.5 day mice

value: ENCBS811RMD at ENCODE; https://www.encodeproject.org/ENCBS811RMD/


title: ChIP-seq from stomach (ENCLB764ZDY)

description:
https://www.encodeproject.org/experiments/ENCSR872WGX/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 16.5 day mouse stomach
experiment encode accession: ENCSR872WGX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR012BVY
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB764ZDY
size range: 300-500

source_name: Mus musculus strain B6NCrl stomach tissue mixed sex embryo (16.5 days)

value: stomach

value: Stomach pooled from embyonic 16.5 day mice

value: embryonic

value: ENCBS243DCE at ENCODE; https://www.encodeproject.org/ENCBS243DCE/


title: ChIP-seq from heart (ENCLB821LMC)

description:
https://www.encodeproject.org/experiments/ENCSR875ZAO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on postnatal 0 day mouse heart
experiment encode accession: ENCSR875ZAO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR334IOH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB821LMC
size range: 300-500

value: tissue

value: Heart from 15 postnatal 0 day mice

value: ENCBS041AAA at ENCODE; https://www.encodeproject.org/ENCBS041AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from stomach (ENCLB243IBR)

description:
https://www.encodeproject.org/experiments/ENCSR872WGX/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 16.5 day mouse stomach
experiment encode accession: ENCSR872WGX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR012BVY
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB243IBR
size range: 300-500

value: Stomach from 41 embyonic 16.5 day mice

value: ENCBS793TEW at ENCODE; https://www.encodeproject.org/ENCBS793TEW/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from intestine (ENCLB205FCT)

description:
https://www.encodeproject.org/experiments/ENCSR872UEE/
***************
biological replicate number: 1
technical replicate number: 1,2
description: Control ChIP-seq on embryonic 15.5 day mouse intestine
experiment encode accession: ENCSR872UEE
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB205FCT
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 4000

value: Control

value: intestine

value: Intestine from 78 embryonic 15.5 day mice

value: pooled male and female

value: healthy

value: ENCBS401LLS at ENCODE; https://www.encodeproject.org/ENCBS401LLS/


title: microRNA-seq from limb (ENCLB772UFX)

description:
https://www.encodeproject.org/experiments/ENCSR900DXS/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq  on embryonic 11.5 day mouse limb
experiment encode accession: ENCSR900DXS
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB772UFX
size range: <30

library_source: transcriptomic

molecule: total RNA

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (11.5 days)

value: limb

value: Limb from 109 embyronic 11.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS066IEL at ENCODE; https://www.encodeproject.org/ENCBS066IEL/


title: ChIP-seq from embryonic facial prominence (ENCLB270MCQ)

description:
https://www.encodeproject.org/experiments/ENCSR886DWH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR886DWH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR329ZEN
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB270MCQ
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap embryonic facial prominence tissue mixed sex embryo (14.5 days)

value: embryonic facial prominence

value: tissue

value: Craniofacial prominence from 24 embryonic 14.5 day mice

value: embryonic

value: ENCBS012AAA at ENCODE; https://www.encodeproject.org/ENCBS012AAA/


title: ChIP-seq from limb (ENCLB264LOV)

description:
https://www.encodeproject.org/experiments/ENCSR871CGP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 14.5 day mouse limb
experiment encode accession: ENCSR871CGP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR232EOO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB264LOV
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap limb tissue mixed sex embryo (14.5 days)

value: Limb from 34 embryonic 14.5 day mice

value: ENCBS023AAA at ENCODE; https://www.encodeproject.org/ENCBS023AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from embryonic facial prominence (ENCLB024JLS)

description:
https://www.encodeproject.org/experiments/ENCSR886DWH/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR886DWH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR329ZEN
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB024JLS
size range: 300-500

value: Craniofacial prominence from 34 embryonic 14.5 day mice

value: ENCBS024AAA at ENCODE; https://www.encodeproject.org/ENCBS024AAA/


title: ChIP-seq from liver (ENCLB173LWQ)

description:
https://www.encodeproject.org/experiments/ENCSR868FWZ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR868FWZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR220PXJ
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB173LWQ
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (13.5 days)

value: liver

value: Liver from embryonic 13.5 day mice

value: pooled male and female

value: ENCBS373XWZ at ENCODE; https://www.encodeproject.org/ENCBS373XWZ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from limb (ENCLB405JGX)

description:
https://www.encodeproject.org/experiments/ENCSR871CGP/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K36me3 ChIP-seq on embryonic 14.5 day mouse limb
experiment encode accession: ENCSR871CGP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR232EOO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB405JGX
size range: 300-500

value: limb

value: Limb from 24 embryonic 14.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS011AAA at ENCODE; https://www.encodeproject.org/ENCBS011AAA/


title: ChIP-seq from liver (ENCLB367GDS)

description:
https://www.encodeproject.org/experiments/ENCSR868FWZ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR868FWZ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR220PXJ
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB367GDS
size range: 300-500

value: tissue

value: embryonic

value: ENCBS146FGW at ENCODE; https://www.encodeproject.org/ENCBS146FGW/


title: ChIP-seq from forebrain (ENCLB073YDZ)

description:
https://www.encodeproject.org/experiments/ENCSR875KRK/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse forebrain
experiment encode accession: ENCSR875KRK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR880HDV
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB073YDZ
size range: 300-500

value: forebrain

value: Forebrain from 62 embryonic 15.5 day mice

value: ENCBS841GER at ENCODE; https://www.encodeproject.org/ENCBS841GER/


title: ChIP-seq from intestine (ENCLB380AEJ)

description:
https://www.encodeproject.org/experiments/ENCSR871KVM/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse intestine
experiment encode accession: ENCSR871KVM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR872UEE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB380AEJ
size range: 300-500

value: intestine

value: Intestine from 62 embryonic 15.5 day mice

value: ENCBS836WEU at ENCODE; https://www.encodeproject.org/ENCBS836WEU/


title: ChIP-seq from midbrain (ENCLB992DHZ)

description:
https://www.encodeproject.org/experiments/ENCSR864DSI/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR864DSI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR748XBE
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB992DHZ
size range: 300-500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (15.5 days)

value: midbrain

value: Midbrain from 78 embryonic 15.5 day mice

value: pooled male and female

value: ENCBS190ETJ at ENCODE; https://www.encodeproject.org/ENCBS190ETJ/


title: microRNA-seq from midbrain (ENCLB286YGC)

description:
https://www.encodeproject.org/experiments/ENCSR863FYW/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq  on embryonic 14.5 day mouse midbrain
experiment encode accession: ENCSR863FYW
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB286YGC
size range: <30

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (14.5 days)

value: single midbrain from pup 1 pregnant 2 collected 7/30/2014

value: Barbara Wold, Caltech

value: ENCBS849BXE at ENCODE; https://www.encodeproject.org/ENCBS849BXE/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from hindbrain (ENCLB674MWX)

description:
https://www.encodeproject.org/experiments/ENCSR864OWV/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 16.5 day mouse hindbrain
experiment encode accession: ENCSR864OWV
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR752KDM
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB674MWX
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (16.5 days)

value: hindbrain

value: tissue

value: Hindbrain pooled from embyonic 16.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS436LSH at ENCODE; https://www.encodeproject.org/ENCBS436LSH/


title: ChIP-seq from lung (ENCLB289VQG)

description:
https://www.encodeproject.org/experiments/ENCSR858AUB/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR858AUB
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR371AKO
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB289VQG
size range: 300-500

source_name: Mus musculus strain B6NCrl lung tissue mixed sex embryo (15.5 days)

value: lung

value: Lung from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS217WPC at ENCODE; https://www.encodeproject.org/ENCBS217WPC/


title: ChIP-seq from lung (ENCLB810QPY)

description:
https://www.encodeproject.org/experiments/ENCSR858AUB/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR858AUB
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR371AKO
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB810QPY
size range: 300-500

value: Lung from 78 embryonic 15.5 day mice

value: ENCBS467HSM at ENCODE; https://www.encodeproject.org/ENCBS467HSM/


title: ChIP-seq from intestine (ENCLB842JUJ)

description:
https://www.encodeproject.org/experiments/ENCSR871KVM/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse intestine
experiment encode accession: ENCSR871KVM
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR872UEE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB842JUJ
size range: 300-500

value: intestine

value: Intestine from 78 embryonic 15.5 day mice

value: pooled male and female

value: ENCBS401LLS at ENCODE; https://www.encodeproject.org/ENCBS401LLS/


title: ChIP-seq from midbrain (ENCLB842JVG)

description:
https://www.encodeproject.org/experiments/ENCSR864DSI/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR864DSI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR748XBE
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB842JVG
size range: 300-500

value: midbrain

value: Midbrain from 62 embryonic 15.5 day mice

value: ENCBS381PEJ at ENCODE; https://www.encodeproject.org/ENCBS381PEJ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from liver (ENCLB700ECU)

description:
https://www.encodeproject.org/experiments/ENCSR889MYY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse liver
experiment encode accession: ENCSR889MYY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR274AQL
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB700ECU
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (15.5 days)

value: liver

value: tissue

value: Liver from 78 embryonic 15.5 day mice

value: healthy

value: ENCBS734ENZ at ENCODE; https://www.encodeproject.org/ENCBS734ENZ/


title: microRNA-seq from midbrain (ENCLB539OCA)

description:
https://www.encodeproject.org/experiments/ENCSR863FYW/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq  on embryonic 14.5 day mouse midbrain
experiment encode accession: ENCSR863FYW
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB539OCA
size range: <30

value: single midbrain from pup 1 pregnant 2 collected 7/24/2014

value: embryonic

value: Barbara Wold, Caltech

value: ENCBS825LGT at ENCODE; https://www.encodeproject.org/ENCBS825LGT/


title: microRNA-seq from hindbrain (ENCLB955BBT)

description:
https://www.encodeproject.org/experiments/ENCSR856ZFY/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on postnatal 0 day mouse hindbrain
experiment encode accession: ENCSR856ZFY
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB955BBT
size range: <30

source_name: Mus musculus strain B6NCrl hindbrain tissue postnatal (0 days)

value: hindbrain

value: single hindbrain from pup 3

value: 0 day

value: postnatal

value: not collected

value: ENCBS901BYV at ENCODE; https://www.encodeproject.org/ENCBS901BYV/


title: ChIP-seq from midbrain (ENCLB188YJE)

description:
https://www.encodeproject.org/experiments/ENCSR857GQI/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR857GQI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR748XBE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB188YJE
size range: 300-500

value: midbrain

value: Midbrain from 62 embryonic 15.5 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS381PEJ at ENCODE; https://www.encodeproject.org/ENCBS381PEJ/


title: ChIP-seq from liver (ENCLB895NOP)

description:
https://www.encodeproject.org/experiments/ENCSR855NKG/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 15.5 day mouse liver
experiment encode accession: ENCSR855NKG
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR274AQL
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB895NOP
size range: 300-500

value: liver

value: tissue

value: Liver from 78 embryonic 15.5 day mice

value: healthy

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: microRNA-seq from hindbrain (ENCLB141URR)

description:
https://www.encodeproject.org/experiments/ENCSR856ZFY/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on postnatal 0 day mouse hindbrain
experiment encode accession: ENCSR856ZFY
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB141URR
size range: <30

value: single hindbrain from pup 1

value: Barbara Wold, Caltech

value: ENCBS489BYD at ENCODE; https://www.encodeproject.org/ENCBS489BYD/


title: ChIP-seq from lung (ENCLB769RSJ)

description:
https://www.encodeproject.org/experiments/ENCSR861MUP/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR861MUP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR371AKO
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB769RSJ
size range: 300-500

value: lung

value: Lung from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS217WPC at ENCODE; https://www.encodeproject.org/ENCBS217WPC/


title: ChIP-seq from heart (ENCLB024YAO)

description:
https://www.encodeproject.org/experiments/ENCSR840PFW/
***************
biological replicate number: 2
technical replicate number: 1
description: Input control ChIP-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR840PFW
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB024YAO
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex embryo (14.5 days)

value: Control

value: heart

value: Heart from pooled embryonic 14.5 day mice

value: ENCBS566AAA at ENCODE; https://www.encodeproject.org/ENCBS566AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from heart (ENCLB295FSR)

description:
https://www.encodeproject.org/experiments/ENCSR840PFW/
***************
biological replicate number: 1
technical replicate number: 1
description: Input control ChIP-seq on embryonic 14.5 day mouse heart
experiment encode accession: ENCSR840PFW
assay title: ChIP-seq
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB295FSR
size range: 300-500

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS563AAA at ENCODE; https://www.encodeproject.org/ENCBS563AAA/


title: ChIP-seq from lung (ENCLB039ESR)

description:
https://www.encodeproject.org/experiments/ENCSR839WFP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 14.5 day mouse lung
experiment encode accession: ENCSR839WFP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR280SYC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB039ESR
size range: 300-500

value: tissue

value: Lung from 34 embryonic 14.5 day mice

value: healthy

value: ENCBS018AAA at ENCODE; https://www.encodeproject.org/ENCBS018AAA/


title: ChIP-seq from midbrain (ENCLB803LMS)

description:
https://www.encodeproject.org/experiments/ENCSR857GQI/
***************
biological replicate number: 1
technical replicate number: 2,1
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR857GQI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR748XBE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB803LMS
size range: 300-500

value: midbrain

value: Midbrain from 78 embryonic 15.5 day mice

value: ENCBS190ETJ at ENCODE; https://www.encodeproject.org/ENCBS190ETJ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from forebrain (ENCLB033EMF)

description:
https://www.encodeproject.org/experiments/ENCSR835BZO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR835BZO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR583ZEV
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB033EMF
size range: 300-500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (13.5 days)

value: forebrain

value: Forebrain from embryonic 13.5 day mice

value: embryonic

value: ENCBS273RVL at ENCODE; https://www.encodeproject.org/ENCBS273RVL/


title: ChIP-seq from forebrain (ENCLB023ZEQ)

description:
https://www.encodeproject.org/experiments/ENCSR835BZO/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR835BZO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR583ZEV
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB023ZEQ
size range: 300-500

value: ENCBS793ZRY at ENCODE; https://www.encodeproject.org/ENCBS793ZRY/


title: ChIP-seq from hindbrain (ENCLB743NDR)

description:
https://www.encodeproject.org/experiments/ENCSR837SKW/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR837SKW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR545RUT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB743NDR
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (13.5 days)

value: hindbrain

value: Hindbrain from embryonic 13.5 day mice

value: ENCBS052EWC at ENCODE; https://www.encodeproject.org/ENCBS052EWC/


title: ChIP-seq from hindbrain (ENCLB664SAB)

description:
https://www.encodeproject.org/experiments/ENCSR837SKW/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 13.5 day mouse hindbrain
experiment encode accession: ENCSR837SKW
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR545RUT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB664SAB
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS296PIR at ENCODE; https://www.encodeproject.org/ENCBS296PIR/


title: ChIP-seq from heart (ENCLB968NIP)

description:
https://www.encodeproject.org/experiments/ENCSR846PJO/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR846PJO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB968NIP
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (16.5 days)

value: heart

value: tissue

value: Heart pooled from embyonic 16.5 day mice

value: healthy

value: ENCBS955JPC at ENCODE; https://www.encodeproject.org/ENCBS955JPC/


title: microRNA-seq from heart (ENCLB903XSV)

description:
https://www.encodeproject.org/experiments/ENCSR834DKI/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq  on postnatal 0 day mouse heart
experiment encode accession: ENCSR834DKI
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB903XSV
size range: <30

source_name: Mus musculus strain B6NCrl heart tissue postnatal (0 days)

value: single heart from pup 3

value: 0 day

value: postnatal

value: not collected

value: Barbara Wold, Caltech

value: ENCBS569APS at ENCODE; https://www.encodeproject.org/ENCBS569APS/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB357KQO)

description:
https://www.encodeproject.org/experiments/ENCSR846PJO/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR846PJO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB357KQO
size range: 300-500

value: Heart from 41 embyonic 16.5 day mice

value: embryonic

value: ENCBS217XWR at ENCODE; https://www.encodeproject.org/ENCBS217XWR/


title: microRNA-seq from intestine (ENCLB402ZDO)

description:
https://www.encodeproject.org/experiments/ENCSR832DUZ/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq  on postnatal 0 day mouse intestine
experiment encode accession: ENCSR832DUZ
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-04
lab: Ali Mortazavi, UCI
library encode accession: ENCLB402ZDO
size range: <30

source_name: Mus musculus strain B6NCrl intestine tissue postnatal (0 days)

value: intestine

value: 1 intestine from pup2 pregnant 1

value: ENCBS623WQD at ENCODE; https://www.encodeproject.org/ENCBS623WQD/


title: microRNA-seq from heart (ENCLB218BOI)

description:
https://www.encodeproject.org/experiments/ENCSR834DKI/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq  on postnatal 0 day mouse heart
experiment encode accession: ENCSR834DKI
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-01-06
lab: Ali Mortazavi, UCI
library encode accession: ENCLB218BOI
size range: <30

value: heart

value: tissue

value: single heart from pup 1

value: ENCBS066TRB at ENCODE; https://www.encodeproject.org/ENCBS066TRB/


title: ChIP-seq from lung (ENCLB974BFK)

description:
https://www.encodeproject.org/experiments/ENCSR839WFP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 14.5 day mouse lung
experiment encode accession: ENCSR839WFP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR280SYC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB974BFK
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap lung tissue mixed sex embryo (14.5 days)

value: lung

value: Lung from 24 embryonic 14.5 day mice

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS006AAA at ENCODE; https://www.encodeproject.org/ENCBS006AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from hindbrain (ENCLB250SNA)

description:
https://www.encodeproject.org/experiments/ENCSR831EKS/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 15.5 day mouse hindbrain
experiment encode accession: ENCSR831EKS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685UUM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB250SNA
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (15.5 days)

value: hindbrain

value: Hindbrain from 62 embryonic 15.5 day mice

value: ENCBS948UKU at ENCODE; https://www.encodeproject.org/ENCBS948UKU/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from hindbrain (ENCLB816NSU)

description:
https://www.encodeproject.org/experiments/ENCSR831EKS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 15.5 day mouse hindbrain
experiment encode accession: ENCSR831EKS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685UUM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB816NSU
size range: 300-500

value: Hindbrain from 78 embryonic 15.5 day mice

value: embryonic

value: ENCBS958AHU at ENCODE; https://www.encodeproject.org/ENCBS958AHU/


title: ChIP-seq from forebrain (ENCLB173KMT)

description:
https://www.encodeproject.org/experiments/ENCSR831YAX/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse forebrain
experiment encode accession: ENCSR831YAX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR244YQD
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB173KMT
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap forebrain tissue mixed sex embryo (14.5 days)

value: forebrain

value: tissue

value: Forebrain from 34 embryonic 14.5 day mice

value: ENCBS014AAA at ENCODE; https://www.encodeproject.org/ENCBS014AAA/


title: ChIP-seq from neural tube (ENCLB568BOH)

description:
https://www.encodeproject.org/experiments/ENCSR826TJQ/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse neural tube
experiment encode accession: ENCSR826TJQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR351BDM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB568BOH
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (15.5 days)

value: neural tube

value: Neural tube from 62 embryonic 15.5 day mice

value: ENCBS206NRE at ENCODE; https://www.encodeproject.org/ENCBS206NRE/


title: ChIP-seq from midbrain (ENCLB525CPR)

description:
https://www.encodeproject.org/experiments/ENCSR817FFF/
***************
biological replicate number: 2
technical replicate number: 1,2,3
description: Input control ChIP-seq on embryonic 16.5 day mouse midbrain
experiment encode accession: ENCSR817FFF
assay title: ChIP-seq
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB525CPR
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (16.5 days)

value: Control

value: midbrain

value: Midbrain from 37 embryonic 16.5 day mice

value: pooled male and female

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS463JSE at ENCODE; https://www.encodeproject.org/ENCBS463JSE/


title: microRNA-seq from heart (ENCLB488ELZ)

description:
https://www.encodeproject.org/experiments/ENCSR829OXY/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq  on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR829OXY
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-18
lab: Ali Mortazavi, UCI
library encode accession: ENCLB488ELZ
size range: <30

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (11.5 days)

value: heart

value: Heart from 109 embyronic 11.5 day mice

value: ENCBS225RIF at ENCODE; https://www.encodeproject.org/ENCBS225RIF/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: microRNA-seq from heart (ENCLB811YPP)

description:
https://www.encodeproject.org/experiments/ENCSR829OXY/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq  on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR829OXY
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-18
lab: Ali Mortazavi, UCI
library encode accession: ENCLB811YPP
size range: <30

value: tissue

value: Heart from embryonic 11.5 day mice

value: embryonic

value: ENCBS046IMM at ENCODE; https://www.encodeproject.org/ENCBS046IMM/


title: ChIP-seq from lung (ENCLB120WNK)

description:
https://www.encodeproject.org/experiments/ENCSR825OWH/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 14.5 day mouse lung
experiment encode accession: ENCSR825OWH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR280SYC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB120WNK
size range: 300-500

value: lung

value: Lung from 34 embryonic 14.5 day mice

value: ENCBS018AAA at ENCODE; https://www.encodeproject.org/ENCBS018AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from lung (ENCLB881CSY)

description:
https://www.encodeproject.org/experiments/ENCSR825OWH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 14.5 day mouse lung
experiment encode accession: ENCSR825OWH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR280SYC
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB881CSY
size range: 300-500

value: Lung from 24 embryonic 14.5 day mice

value: ENCBS006AAA at ENCODE; https://www.encodeproject.org/ENCBS006AAA/


title: ChIP-seq from neural tube (ENCLB675VPL)

description:
https://www.encodeproject.org/experiments/ENCSR826TJQ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse neural tube
experiment encode accession: ENCSR826TJQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR351BDM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB675VPL
size range: 300-500

value: neural tube

value: Neural tube from 78 embryonic 15.5 day mice

value: pooled male and female

value: healthy

value: ENCBS944KEZ at ENCODE; https://www.encodeproject.org/ENCBS944KEZ/


title: ChIP-seq from limb (ENCLB173HVC)

description:
https://www.encodeproject.org/experiments/ENCSR810EOA/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR810EOA
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR070OXL
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB173HVC
size range: 300-500

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (15.5 days)

value: limb

value: Limb from 78 embryonic 15.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS735QNY at ENCODE; https://www.encodeproject.org/ENCBS735QNY/


title: ChIP-seq from limb (ENCLB732ABX)

description:
https://www.encodeproject.org/experiments/ENCSR810EOA/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me1 ChIP-seq on embryonic 15.5 day mouse limb
experiment encode accession: ENCSR810EOA
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR070OXL
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB732ABX
size range: 300-500

value: tissue

value: Limb from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS696JKV at ENCODE; https://www.encodeproject.org/ENCBS696JKV/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: microRNA-seq from intestine (ENCLB890EYS)

description:
https://www.encodeproject.org/experiments/ENCSR832DUZ/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq  on postnatal 0 day mouse intestine
experiment encode accession: ENCSR832DUZ
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-04
lab: Ali Mortazavi, UCI
library encode accession: ENCLB890EYS
size range: <30

value: intestine

value: 1 intestine from pup1 pregnant 1

value: 0 day

value: postnatal

value: not collected

value: Barbara Wold, Caltech

value: ENCBS182YRY at ENCODE; https://www.encodeproject.org/ENCBS182YRY/


title: ChIP-seq from hindbrain (ENCLB806FQF)

description:
https://www.encodeproject.org/experiments/ENCSR797EYS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 16.5 day mouse hindbrain
experiment encode accession: ENCSR797EYS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR752KDM
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB806FQF
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (16.5 days)

value: hindbrain

value: Hindbrain pooled from embyonic 16.5 day mice

value: pooled male and female

value: healthy

value: ENCBS436LSH at ENCODE; https://www.encodeproject.org/ENCBS436LSH/


title: microRNA-seq from liver (ENCLB381JAS)

description:
https://www.encodeproject.org/experiments/ENCSR809AKO/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR809AKO
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-23
lab: Ali Mortazavi, UCI
library encode accession: ENCLB381JAS
size range: <30

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (13.5 days)

value: liver

value: tissue

value: Liver from embryonic 13.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS373XWZ at ENCODE; https://www.encodeproject.org/ENCBS373XWZ/


title: ChIP-seq from liver (ENCLB928SIF)

description:
https://www.encodeproject.org/experiments/ENCSR802RET/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR802RET
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR082JEN
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB928SIF
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (16.5 days)

value: Liver pooled from embyonic 16.5 day mice

value: embryonic

value: ENCBS236CDJ at ENCODE; https://www.encodeproject.org/ENCBS236CDJ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from liver (ENCLB199HEG)

description:
https://www.encodeproject.org/experiments/ENCSR802RET/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR802RET
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR082JEN
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB199HEG
size range: 300-500

value: Liver from 41 embyonic 16.5 day mice

value: ENCBS279BWR at ENCODE; https://www.encodeproject.org/ENCBS279BWR/


title: ChIP-seq from liver (ENCLB650VSO)

description:
https://www.encodeproject.org/experiments/ENCSR795UOC/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR795UOC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR082JEN
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB650VSO
size range: 300-500


title: ChIP-seq from hindbrain (ENCLB724SRF)

description:
https://www.encodeproject.org/experiments/ENCSR809NWL/
***************
biological replicate number: 2
technical replicate number: 1,3,2
description: H3K36me3 ChIP-seq on embryonic 15.5 day mouse hindbrain
experiment encode accession: ENCSR809NWL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685UUM
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB724SRF
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

value: Hindbrain from 62 embryonic 15.5 day mice

value: ENCBS948UKU at ENCODE; https://www.encodeproject.org/ENCBS948UKU/


title: microRNA-seq from liver (ENCLB354KMZ)

description:
https://www.encodeproject.org/experiments/ENCSR809AKO/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR809AKO
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-23
lab: Ali Mortazavi, UCI
library encode accession: ENCLB354KMZ
size range: <30

value: ENCBS146FGW at ENCODE; https://www.encodeproject.org/ENCBS146FGW/


title: ChIP-seq from heart (ENCLB363CUR)

description:
https://www.encodeproject.org/experiments/ENCSR781ORQ/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR781ORQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB363CUR
size range: 300-500

value: heart

value: Heart pooled from embyonic 16.5 day mice

value: pooled male and female

value: ENCBS955JPC at ENCODE; https://www.encodeproject.org/ENCBS955JPC/


title: ChIP-seq from kidney (ENCLB313QPH)

description:
https://www.encodeproject.org/experiments/ENCSR780JSE/
***************
biological replicate number: 1
technical replicate number: 1,2
description: Control ChIP-seq on embryonic 15.5 day mouse kidney
experiment encode accession: ENCSR780JSE
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB313QPH
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 4000

source_name: Mus musculus strain B6NCrl kidney tissue mixed sex embryo (15.5 days)

value: Control

value: kidney

value: tissue

value: Kidney from 78 embryonic 15.5 day mice

value: healthy

value: ENCBS899UOK at ENCODE; https://www.encodeproject.org/ENCBS899UOK/


title: ChIP-seq from heart (ENCLB837DDP)

description:
https://www.encodeproject.org/experiments/ENCSR790LOX/
***************
biological replicate number: 1
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on postnatal 0 day mouse heart
experiment encode accession: ENCSR790LOX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR334IOH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB837DDP
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap heart tissue mixed sex postnatal (0 days)

value: Heart from 15 postnatal 0 day mice

value: 0 day

value: postnatal

value: Len Pennacchio, LBNL

value: ENCBS041AAA at ENCODE; https://www.encodeproject.org/ENCBS041AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from embryonic facial prominence (ENCLB043HLR)

description:
https://www.encodeproject.org/experiments/ENCSR780NWL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 13.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR780NWL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742ZUI
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB043HLR
size range: 300-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (13.5 days)

value: embryonic facial prominence

value: Embryonic facial prominence from embryonic 13.5 day mice

value: embryonic

value: ENCBS764ZZN at ENCODE; https://www.encodeproject.org/ENCBS764ZZN/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB401CCS)

description:
https://www.encodeproject.org/experiments/ENCSR790LOX/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27me3 ChIP-seq on postnatal 0 day mouse heart
experiment encode accession: ENCSR790LOX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR334IOH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB401CCS
size range: 300-500

value: heart

value: Heart from pooled postnatal 0 day mice

value: pooled male and female

value: ENCBS557AAA at ENCODE; https://www.encodeproject.org/ENCBS557AAA/


title: ChIP-seq from kidney (ENCLB614PCB)

description:
https://www.encodeproject.org/experiments/ENCSR780JSE/
***************
biological replicate number: 2
technical replicate number: 1,2
description: Control ChIP-seq on embryonic 15.5 day mouse kidney
experiment encode accession: ENCSR780JSE
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB614PCB
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 4000

value: Control

value: kidney

value: tissue

value: Kidney from 62 embryonic 15.5 day mice

value: healthy

value: ENCBS924ZKF at ENCODE; https://www.encodeproject.org/ENCBS924ZKF/


title: ChIP-seq from embryonic facial prominence (ENCLB338BUV)

description:
https://www.encodeproject.org/experiments/ENCSR780NWL/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 13.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR780NWL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742ZUI
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB338BUV
size range: 300-500

value: Len Pennacchio, LBNL

value: ENCBS847MIW at ENCODE; https://www.encodeproject.org/ENCBS847MIW/


title: ChIP-seq from liver (ENCLB643YHL)

description:
https://www.encodeproject.org/experiments/ENCSR795UOC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR795UOC
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR082JEN
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB643YHL
size range: 300-500

value: liver

value: Liver pooled from embyonic 16.5 day mice

value: ENCBS236CDJ at ENCODE; https://www.encodeproject.org/ENCBS236CDJ/


title: microRNA-seq from heart (ENCLB494YQM)

description:
https://www.encodeproject.org/experiments/ENCSR782NFL/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on embryonic 15.5 day mouse heart
experiment encode accession: ENCSR782NFL
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB494YQM
size range: <30

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (15.5 days)

value: Heart from 78 embryonic 15.5 day mice

value: embryonic

value: ENCBS595EMK at ENCODE; https://www.encodeproject.org/ENCBS595EMK/


title: ChIP-seq from lung (ENCLB347BAG)

description:
https://www.encodeproject.org/experiments/ENCSR776RJR/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K36me3 ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR776RJR
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR371AKO
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB347BAG
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl lung tissue mixed sex embryo (15.5 days)

value: lung

value: Lung from 62 embryonic 15.5 day mice

value: ENCBS217WPC at ENCODE; https://www.encodeproject.org/ENCBS217WPC/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from neural tube (ENCLB877MRJ)

description:
https://www.encodeproject.org/experiments/ENCSR776QRL/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 14.5 day mouse neural tube
experiment encode accession: ENCSR776QRL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR254WNU
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB877MRJ
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap neural tube tissue mixed sex embryo (14.5 days)

value: neural tube

value: Neural tube from 34 embryonic 14.5 day mice

value: pooled male and female

value: ENCBS025AAA at ENCODE; https://www.encodeproject.org/ENCBS025AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from lung (ENCLB764XPL)

description:
https://www.encodeproject.org/experiments/ENCSR773EGV/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR773EGV
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR371AKO
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB764XPL
size range: 300-500

value: tissue

value: Lung from 78 embryonic 15.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS467HSM at ENCODE; https://www.encodeproject.org/ENCBS467HSM/


title: ChIP-seq from hindbrain (ENCLB246IAO)

description:
https://www.encodeproject.org/experiments/ENCSR771ILS/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on postnatal 0 day mouse hindbrain
experiment encode accession: ENCSR771ILS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR066SPF
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB246IAO
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap hindbrain tissue mixed sex postnatal (0 days)

value: hindbrain

value: Hindbrain from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: ENCBS556AAA at ENCODE; https://www.encodeproject.org/ENCBS556AAA/


title: microRNA-seq from forebrain (ENCLB616ZOB)

description:
https://www.encodeproject.org/experiments/ENCSR758VDY/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 15.5 day mouse forebrain
experiment encode accession: ENCSR758VDY
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB616ZOB
size range: <30

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (15.5 days)

value: forebrain

value: Forebrain from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS841GER at ENCODE; https://www.encodeproject.org/ENCBS841GER/


title: ChIP-seq from limb (ENCLB602JHK)

description:
https://www.encodeproject.org/experiments/ENCSR759RVE/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR759RVE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR465WTL
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB602JHK
size range: 300-500

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (13.5 days)

value: limb

value: Limb from embryonic 13.5 day mice

value: pooled male and female

value: ENCBS896ZED at ENCODE; https://www.encodeproject.org/ENCBS896ZED/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from lung (ENCLB418XFJ)

description:
https://www.encodeproject.org/experiments/ENCSR773EGV/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR773EGV
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR371AKO
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB418XFJ
size range: 300-500

value: lung

value: tissue

value: Lung from 62 embryonic 15.5 day mice

value: healthy

value: ENCBS217WPC at ENCODE; https://www.encodeproject.org/ENCBS217WPC/


title: ChIP-seq from limb (ENCLB648VAU)

description:
https://www.encodeproject.org/experiments/ENCSR759RVE/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR759RVE
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR465WTL
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB648VAU
size range: 300-500

value: Len Pennacchio, LBNL

value: ENCBS176PGP at ENCODE; https://www.encodeproject.org/ENCBS176PGP/


title: ChIP-seq from limb (ENCLB077RZK)

description:
https://www.encodeproject.org/experiments/ENCSR765SJF/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse limb
experiment encode accession: ENCSR765SJF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR232EOO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB077RZK
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap limb tissue mixed sex embryo (14.5 days)

value: Limb from 34 embryonic 14.5 day mice

value: ENCBS023AAA at ENCODE; https://www.encodeproject.org/ENCBS023AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from limb (ENCLB744SSD)

description:
https://www.encodeproject.org/experiments/ENCSR765SJF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on embryonic 14.5 day mouse limb
experiment encode accession: ENCSR765SJF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR232EOO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB744SSD
size range: 300-500

value: Limb from 24 embryonic 14.5 day mice

value: embryonic

value: ENCBS011AAA at ENCODE; https://www.encodeproject.org/ENCBS011AAA/


title: ChIP-seq from embryonic facial prominence (ENCLB338SMS)

description:
https://www.encodeproject.org/experiments/ENCSR758UAI/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 13.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR758UAI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742ZUI
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB338SMS
size range: 300-500

value: embryonic facial prominence

value: Embryonic facial prominence from embryonic 13.5 day mice

value: ENCBS847MIW at ENCODE; https://www.encodeproject.org/ENCBS847MIW/


title: ChIP-seq from embryonic facial prominence (ENCLB953CNP)

description:
https://www.encodeproject.org/experiments/ENCSR758UAI/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 13.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR758UAI
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR742ZUI
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB953CNP
size range: 300-500

value: pooled male and female

value: ENCBS764ZZN at ENCODE; https://www.encodeproject.org/ENCBS764ZZN/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: microRNA-seq from heart (ENCLB858YJZ)

description:
https://www.encodeproject.org/experiments/ENCSR782NFL/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 15.5 day mouse heart
experiment encode accession: ENCSR782NFL
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB858YJZ
size range: <30

value: heart

value: tissue

value: Heart from 62 embryonic 15.5 day mice

value: ENCBS909LOF at ENCODE; https://www.encodeproject.org/ENCBS909LOF/


title: ChIP-seq from midbrain (ENCLB155KVI)

description:
https://www.encodeproject.org/experiments/ENCSR755SGK/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse midbrain
experiment encode accession: ENCSR755SGK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR413VHH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB155KVI
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue mixed sex embryo (14.5 days)

value: midbrain

value: Midbrain from 24 embryonic 14.5 day mice

value: healthy

value: Len Pennacchio, LBNL

value: ENCBS003AAA at ENCODE; https://www.encodeproject.org/ENCBS003AAA/


title: ChIP-seq from embryonic facial prominence (ENCLB997KYQ)

description:
https://www.encodeproject.org/experiments/ENCSR755PMX/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR755PMX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR981PSX
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB997KYQ
size range: 300-500

source_name: Mus musculus strain B6NCrl embryonic facial prominence tissue mixed sex embryo (15.5 days)

value: Embryonic facial prominence from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS900XQR at ENCODE; https://www.encodeproject.org/ENCBS900XQR/


title: ChIP-seq from midbrain (ENCLB191UYY)

description:
https://www.encodeproject.org/experiments/ENCSR754AXU/
***************
biological replicate number: 1
technical replicate number: 2,1
description: H3K9me3 ChIP-seq on embryonic 13.5 day mouse midbrain
experiment encode accession: ENCSR754AXU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR359ETU
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB191UYY
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (13.5 days)

value: Midbrain from embryonic 13.5 day mice

value: ENCBS185VNZ at ENCODE; https://www.encodeproject.org/ENCBS185VNZ/


title: ChIP-seq from midbrain (ENCLB056AND)

description:
https://www.encodeproject.org/experiments/ENCSR748XBE/
***************
biological replicate number: 2
technical replicate number: 1,2,3
description: Control ChIP-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR748XBE
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB056AND
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 4000

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (15.5 days)

value: Control

value: Midbrain from 62 embryonic 15.5 day mice

value: pooled male and female

value: ENCBS381PEJ at ENCODE; https://www.encodeproject.org/ENCBS381PEJ/


title: ChIP-seq from embryonic facial prominence (ENCLB004WNJ)

description:
https://www.encodeproject.org/experiments/ENCSR755PMX/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse embryonic facial prominence
experiment encode accession: ENCSR755PMX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR981PSX
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB004WNJ
size range: 300-500

value: embryonic facial prominence

value: tissue

value: Embryonic facial prominence from 78 embryonic 15.5 day mice

value: ENCBS543BPM at ENCODE; https://www.encodeproject.org/ENCBS543BPM/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from midbrain (ENCLB234UXT)

description:
https://www.encodeproject.org/experiments/ENCSR755SGK/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 14.5 day mouse midbrain
experiment encode accession: ENCSR755SGK
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR413VHH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB234UXT
size range: 300-500

value: midbrain

value: Midbrain from 34 embryonic 14.5 day mice

value: healthy

value: ENCBS015AAA at ENCODE; https://www.encodeproject.org/ENCBS015AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from heart (ENCLB688MPD)

description:
https://www.encodeproject.org/experiments/ENCSR751HEG/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR751HEG
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR317ENO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB688MPD
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (11.5 days)

value: heart

value: Heart from 109 embyronic 11.5 day mice

value: embryonic

value: Len Pennacchio, LBNL

value: ENCBS225RIF at ENCODE; https://www.encodeproject.org/ENCBS225RIF/


title: ChIP-seq from heart (ENCLB614MYM)

description:
https://www.encodeproject.org/experiments/ENCSR748BQH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR748BQH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR317ENO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB614MYM
size range: 300-500

value: pooled male and female


title: ChIP-seq from midbrain (ENCLB029SEB)

description:
https://www.encodeproject.org/experiments/ENCSR754AXU/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9me3 ChIP-seq on embryonic 13.5 day mouse midbrain
experiment encode accession: ENCSR754AXU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR359ETU
encode release date: 2016-02-18
lab: Bing Ren, UCSD
library encode accession: ENCLB029SEB
size range: 300-500

value: Midbrain from embryonic 13.5 day mice

value: ENCBS725LVX at ENCODE; https://www.encodeproject.org/ENCBS725LVX/


title: ChIP-seq from intestine (ENCLB358KQD)

description:
https://www.encodeproject.org/experiments/ENCSR749PZB/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse intestine
experiment encode accession: ENCSR749PZB
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR635JIC
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB358KQD
size range: 300-500

source_name: Mus musculus strain B6NCrl intestine tissue mixed sex embryo (16.5 days)

value: intestine

value: tissue

value: Intestine from 41 embyonic 16.5 day mice

value: ENCBS072GMU at ENCODE; https://www.encodeproject.org/ENCBS072GMU/


title: ChIP-seq from heart (ENCLB638IEL)

description:
https://www.encodeproject.org/experiments/ENCSR748BQH/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR748BQH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR317ENO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB638IEL
size range: 300-500

value: Heart from embryonic 11.5 day mice

value: ENCBS046IMM at ENCODE; https://www.encodeproject.org/ENCBS046IMM/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: microRNA-seq from liver (ENCLB985QMI)

description:
https://www.encodeproject.org/experiments/ENCSR752QGH/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR752QGH
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB985QMI
size range: <30

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (16.5 days)

value: liver

value: Liver from 41 embyonic 16.5 day mice

value: healthy

value: ENCBS279BWR at ENCODE; https://www.encodeproject.org/ENCBS279BWR/


title: ChIP-seq from intestine (ENCLB405VSD)

description:
https://www.encodeproject.org/experiments/ENCSR749PZB/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse intestine
experiment encode accession: ENCSR749PZB
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR635JIC
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB405VSD
size range: 300-500

value: Intestine pooled from embyonic 16.5 day mice

value: embryonic

value: ENCBS856EWN at ENCODE; https://www.encodeproject.org/ENCBS856EWN/


title: microRNA-seq from forebrain (ENCLB461OBS)

description:
https://www.encodeproject.org/experiments/ENCSR758VDY/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on embryonic 15.5 day mouse forebrain
experiment encode accession: ENCSR758VDY
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB461OBS
size range: <30

value: forebrain

value: Forebrain from 78 embryonic 15.5 day mice

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS811RMD at ENCODE; https://www.encodeproject.org/ENCBS811RMD/


title: ChIP-seq from heart (ENCLB928VCK)

description:
https://www.encodeproject.org/experiments/ENCSR747VPY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR747VPY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB928VCK
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (16.5 days)

value: heart

value: tissue

value: Heart pooled from embyonic 16.5 day mice

value: ENCBS955JPC at ENCODE; https://www.encodeproject.org/ENCBS955JPC/


title: microRNA-seq from liver (ENCLB884KSB)

description:
https://www.encodeproject.org/experiments/ENCSR752QGH/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on embryonic 16.5 day mouse liver
experiment encode accession: ENCSR752QGH
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB884KSB
size range: <30

value: Liver pooled from embyonic 16.5 day mice

value: ENCBS236CDJ at ENCODE; https://www.encodeproject.org/ENCBS236CDJ/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB522MWW)

description:
https://www.encodeproject.org/experiments/ENCSR751HEG/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 11.5 day mouse heart
experiment encode accession: ENCSR751HEG
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR317ENO
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB522MWW
size range: 300-500

value: Heart from embryonic 11.5 day mice

value: healthy

value: ENCBS046IMM at ENCODE; https://www.encodeproject.org/ENCBS046IMM/


title: ChIP-seq from kidney (ENCLB634YFB)

description:
https://www.encodeproject.org/experiments/ENCSR740DYF/
***************
biological replicate number: 2
technical replicate number: 2,1
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse kidney
experiment encode accession: ENCSR740DYF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR780JSE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB634YFB
size range: 300-500

source_name: Mus musculus strain B6NCrl kidney tissue mixed sex embryo (15.5 days)

value: kidney

value: Kidney from 62 embryonic 15.5 day mice

value: embryonic

value: ENCBS924ZKF at ENCODE; https://www.encodeproject.org/ENCBS924ZKF/


title: ChIP-seq from lung (ENCLB599TJA)

description:
https://www.encodeproject.org/experiments/ENCSR744LCN/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR744LCN
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR371AKO
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB599TJA
size range: 300-500

value: lung

value: Lung from 78 embryonic 15.5 day mice

value: pooled male and female

value: ENCBS467HSM at ENCODE; https://www.encodeproject.org/ENCBS467HSM/


title: ChIP-seq from kidney (ENCLB128KUI)

description:
https://www.encodeproject.org/experiments/ENCSR740DYF/
***************
biological replicate number: 1
technical replicate number: 2,1
description: H3K27me3 ChIP-seq on embryonic 15.5 day mouse kidney
experiment encode accession: ENCSR740DYF
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR780JSE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB128KUI
size range: 300-500

value: tissue

value: Kidney from 78 embryonic 15.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS899UOK at ENCODE; https://www.encodeproject.org/ENCBS899UOK/


title: ChIP-seq from forebrain (ENCLB659NXI)

description:
https://www.encodeproject.org/experiments/ENCSR736GVO/
***************
biological replicate number: 2
technical replicate number: 2,1
description: H3K27me3 ChIP-seq on embryonic 13.5 day mouse forebrain
experiment encode accession: ENCSR736GVO
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR583ZEV
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB659NXI
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (13.5 days)

value: forebrain

value: Forebrain from embryonic 13.5 day mice

value: ENCBS793ZRY at ENCODE; https://www.encodeproject.org/ENCBS793ZRY/


title: ChIP-seq from hindbrain (ENCLB504RQU)

description:
https://www.encodeproject.org/experiments/ENCSR718CAJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 16.5 day mouse hindbrain
experiment encode accession: ENCSR718CAJ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR752KDM
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB504RQU
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (16.5 days)

value: hindbrain

value: Hindbrain pooled from embyonic 16.5 day mice

value: healthy

value: ENCBS436LSH at ENCODE; https://www.encodeproject.org/ENCBS436LSH/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from liver (ENCLB850AEC)

description:
https://www.encodeproject.org/experiments/ENCSR731OMP/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR731OMP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR220PXJ
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB850AEC
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (13.5 days)

value: liver

value: Liver from embryonic 13.5 day mice

value: embryonic

value: ENCBS373XWZ at ENCODE; https://www.encodeproject.org/ENCBS373XWZ/


title: ChIP-seq from forebrain (ENCLB169HFU)

description:
https://www.encodeproject.org/experiments/ENCSR717XCU/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse forebrain
experiment encode accession: ENCSR717XCU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR880HDV
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB169HFU
size range: 300-500

value: Forebrain from 78 embryonic 15.5 day mice

value: pooled male and female

value: ENCBS811RMD at ENCODE; https://www.encodeproject.org/ENCBS811RMD/


title: ChIP-seq from hindbrain (ENCLB293BXP)

description:
https://www.encodeproject.org/experiments/ENCSR721MSV/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on postnatal 0 day mouse hindbrain
experiment encode accession: ENCSR721MSV
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR066SPF
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB293BXP
size range: 300-500

value: tissue

value: Hindbrain from pooled postnatal 0 day mice

value: 0 day

value: postnatal

value: Len Pennacchio, LBNL

value: ENCBS556AAA at ENCODE; https://www.encodeproject.org/ENCBS556AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from hindbrain (ENCLB108LJC)

description:
https://www.encodeproject.org/experiments/ENCSR734IEL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 11.5 day mouse hindbrain
experiment encode accession: ENCSR734IEL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR563WKD
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB108LJC
size range: 300-500

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (11.5 days)

value: hindbrain

value: Hindbrain from 109 embyronic 11.5 day mice

value: healthy

value: ENCBS199NDR at ENCODE; https://www.encodeproject.org/ENCBS199NDR/


title: microRNA-seq from lung (ENCLB541IXQ)

description:
https://www.encodeproject.org/experiments/ENCSR713JKD/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq on embryonic 16.5 day mouse lung
experiment encode accession: ENCSR713JKD
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB541IXQ
size range: <30

source_name: Mus musculus strain B6NCrl lung tissue mixed sex embryo (16.5 days)

value: lung

value: Lung pooled from embyonic 16.5 day mice

value: ENCBS377RBN at ENCODE; https://www.encodeproject.org/ENCBS377RBN/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from kidney (ENCLB947XAR)

description:
https://www.encodeproject.org/experiments/ENCSR711SVB/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 15.5 day mouse kidney
experiment encode accession: ENCSR711SVB
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR780JSE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB947XAR
size range: 300-500

value: kidney

value: Kidney from 78 embryonic 15.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS899UOK at ENCODE; https://www.encodeproject.org/ENCBS899UOK/


title: ChIP-seq from midbrain (ENCLB736MNS)

description:
https://www.encodeproject.org/experiments/ENCSR706PSQ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 13.5 day mouse midbrain
experiment encode accession: ENCSR706PSQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR359ETU
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB736MNS
size range: 300-500

value: midbrain

value: tissue

value: Midbrain from embryonic 13.5 day mice

value: ENCBS185VNZ at ENCODE; https://www.encodeproject.org/ENCBS185VNZ/


title: ChIP-seq from midbrain (ENCLB303MIO)

description:
https://www.encodeproject.org/experiments/ENCSR702JYV/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 14.5 day mouse midbrain
experiment encode accession: ENCSR702JYV
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR413VHH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB303MIO
size range: 300-500

value: Midbrain from 24 embryonic 14.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS003AAA at ENCODE; https://www.encodeproject.org/ENCBS003AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from lung (ENCLB839FRB)

description:
https://www.encodeproject.org/experiments/ENCSR744LCN/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse lung
experiment encode accession: ENCSR744LCN
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR371AKO
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB839FRB
size range: 300-500

source_name: Mus musculus strain B6NCrl lung tissue mixed sex embryo (15.5 days)

value: lung

value: Lung from 62 embryonic 15.5 day mice

value: healthy

value: ENCBS217WPC at ENCODE; https://www.encodeproject.org/ENCBS217WPC/


title: ChIP-seq from kidney (ENCLB752CTB)

description:
https://www.encodeproject.org/experiments/ENCSR711SVB/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 15.5 day mouse kidney
experiment encode accession: ENCSR711SVB
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR780JSE
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB752CTB
size range: 300-500

value: kidney

value: Kidney from 62 embryonic 15.5 day mice

value: ENCBS924ZKF at ENCODE; https://www.encodeproject.org/ENCBS924ZKF/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from limb (ENCLB751JXI)

description:
https://www.encodeproject.org/experiments/ENCSR709CLU/
***************
biological replicate number: 2
technical replicate number: 1,2
description: H3K27me3 ChIP-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR709CLU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR465WTL
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB751JXI
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

source_name: Mus musculus strain B6NCrl limb tissue mixed sex embryo (13.5 days)

value: limb

value: Limb from embryonic 13.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS896ZED at ENCODE; https://www.encodeproject.org/ENCBS896ZED/


title: microRNA-seq from lung (ENCLB674LKN)

description:
https://www.encodeproject.org/experiments/ENCSR713JKD/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 16.5 day mouse lung
experiment encode accession: ENCSR713JKD
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB674LKN
size range: <30

value: tissue

value: Lung from 41 embyonic 16.5 day mice

value: ENCBS833ZFI at ENCODE; https://www.encodeproject.org/ENCBS833ZFI/


title: ChIP-seq from midbrain (ENCLB743TIG)

description:
https://www.encodeproject.org/experiments/ENCSR706PSQ/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 13.5 day mouse midbrain
experiment encode accession: ENCSR706PSQ
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR359ETU
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB743TIG
size range: 300-500

value: midbrain

value: Midbrain from embryonic 13.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS725LVX at ENCODE; https://www.encodeproject.org/ENCBS725LVX/


title: ChIP-seq from neural tube (ENCLB737HUF)

description:
https://www.encodeproject.org/experiments/ENCSR704IWS/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR704IWS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR295GGT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB737HUF
size range: 300-500

source_name: Mus musculus strain B6NCrl neural tube tissue mixed sex embryo (13.5 days)

value: neural tube

value: Neural tube from embryonic 13.5 day mice

value: healthy

value: ENCBS549OYR at ENCODE; https://www.encodeproject.org/ENCBS549OYR/


title: ChIP-seq from limb (ENCLB048RML)

description:
https://www.encodeproject.org/experiments/ENCSR709CLU/
***************
biological replicate number: 1
technical replicate number: 2,1
description: H3K27me3 ChIP-seq on embryonic 13.5 day mouse limb
experiment encode accession: ENCSR709CLU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR465WTL
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB048RML
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 2500

value: ENCBS176PGP at ENCODE; https://www.encodeproject.org/ENCBS176PGP/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from heart (ENCLB556YQI)

description:
https://www.encodeproject.org/experiments/ENCSR747VPY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 16.5 day mouse heart
experiment encode accession: ENCSR747VPY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR685AMF
encode release date: 2014-12-17
lab: Bing Ren, UCSD
library encode accession: ENCLB556YQI
size range: 300-500

value: heart

value: Heart from 41 embyonic 16.5 day mice

value: ENCBS217XWR at ENCODE; https://www.encodeproject.org/ENCBS217XWR/


title: ChIP-seq from midbrain (ENCLB515NTN)

description:
https://www.encodeproject.org/experiments/ENCSR702JYV/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K36me3 ChIP-seq on embryonic 14.5 day mouse midbrain
experiment encode accession: ENCSR702JYV
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR413VHH
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB515NTN
size range: 300-500

source_name: Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue mixed sex embryo (14.5 days)

value: Midbrain from 34 embryonic 14.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS015AAA at ENCODE; https://www.encodeproject.org/ENCBS015AAA/

value: Derived from ENCODE donor ENCDO469XMJ; https://www.encodeproject.org/ENCDO469XMJ/


title: ChIP-seq from heart (ENCLB939HYM)

description:
https://www.encodeproject.org/experiments/ENCSR699XHY/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR699XHY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR077QRY
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB939HYM
size range: 300-500

source_name: Mus musculus strain B6NCrl heart tissue mixed sex embryo (13.5 days)

value: tissue

value: Heart from embryonic 13.5 day mice

value: ENCBS814PLT at ENCODE; https://www.encodeproject.org/ENCBS814PLT/


title: ChIP-seq from hindbrain (ENCLB361NYD)

description:
https://www.encodeproject.org/experiments/ENCSR734IEL/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 11.5 day mouse hindbrain
experiment encode accession: ENCSR734IEL
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR563WKD
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB361NYD
size range: 300-500

value: hindbrain

value: Hindbrain from 88 embyronic 11.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS976DPO at ENCODE; https://www.encodeproject.org/ENCBS976DPO/


title: ChIP-seq from neural tube (ENCLB989UJD)

description:
https://www.encodeproject.org/experiments/ENCSR704IWS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on embryonic 13.5 day mouse neural tube
experiment encode accession: ENCSR704IWS
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR295GGT
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB989UJD
size range: 300-500

value: neural tube

value: Neural tube from embryonic 13.5 day mice

value: healthy

value: ENCBS956BQY at ENCODE; https://www.encodeproject.org/ENCBS956BQY/


title: ChIP-seq from forebrain (ENCLB573SJS)

description:
https://www.encodeproject.org/experiments/ENCSR691NQH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 15.5 day mouse forebrain
experiment encode accession: ENCSR691NQH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR880HDV
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB573SJS
size range: 300-500

source_name: Mus musculus strain B6NCrl forebrain tissue mixed sex embryo (15.5 days)

value: forebrain

value: Forebrain from 78 embryonic 15.5 day mice

value: ENCBS811RMD at ENCODE; https://www.encodeproject.org/ENCBS811RMD/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: microRNA-seq from bladder (ENCLB740SKA)

description:
https://www.encodeproject.org/experiments/ENCSR694SDO/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq  on postnatal 0 day mouse bladder
experiment encode accession: ENCSR694SDO
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-04
lab: Ali Mortazavi, UCI
library encode accession: ENCLB740SKA
size range: <30

source_name: Mus musculus strain B6NCrl bladder tissue postnatal (0 days)

value: bladder

value: 1 bladder from pup2 pregnant 1

value: 0 day

value: postnatal

value: not collected

value: Barbara Wold, Caltech

value: ENCBS437LDX at ENCODE; https://www.encodeproject.org/ENCBS437LDX/


title: ChIP-seq from forebrain (ENCLB510HYX)

description:
https://www.encodeproject.org/experiments/ENCSR691NQH/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 15.5 day mouse forebrain
experiment encode accession: ENCSR691NQH
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR880HDV
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB510HYX
size range: 300-500

value: tissue

value: Forebrain from 62 embryonic 15.5 day mice

value: embryonic

value: pooled male and female

value: Len Pennacchio, LBNL

value: ENCBS841GER at ENCODE; https://www.encodeproject.org/ENCBS841GER/


title: microRNA-seq from bladder (ENCLB085YUC)

description:
https://www.encodeproject.org/experiments/ENCSR694SDO/
***************
biological replicate number: 1
technical replicate number: 1
description: miRNA-seq  on postnatal 0 day mouse bladder
experiment encode accession: ENCSR694SDO
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-02-04
lab: Ali Mortazavi, UCI
library encode accession: ENCLB085YUC
size range: <30

value: 1 bladder from pup1 pregnant 1

value: ENCBS809DPZ at ENCODE; https://www.encodeproject.org/ENCBS809DPZ/


title: ChIP-seq from heart (ENCLB279XIV)

description:
https://www.encodeproject.org/experiments/ENCSR699XHY/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on embryonic 13.5 day mouse heart
experiment encode accession: ENCSR699XHY
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR077QRY
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB279XIV
size range: 300-500

value: heart

value: Heart from embryonic 13.5 day mice

value: healthy

value: ENCBS490ZWZ at ENCODE; https://www.encodeproject.org/ENCBS490ZWZ/


title: ChIP-seq from liver (ENCLB402JQT)

description:
https://www.encodeproject.org/experiments/ENCSR731OMP/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 13.5 day mouse liver
experiment encode accession: ENCSR731OMP
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR220PXJ
encode release date: 2015-06-23
lab: Bing Ren, UCSD
library encode accession: ENCLB402JQT
size range: 300-500

value: liver

value: Liver from embryonic 13.5 day mice

value: ENCBS146FGW at ENCODE; https://www.encodeproject.org/ENCBS146FGW/

value: Derived from ENCODE donor ENCDO956IXV; https://www.encodeproject.org/ENCDO956IXV/


title: ChIP-seq from forebrain (ENCLB635XFX)

description:
https://www.encodeproject.org/experiments/ENCSR717XCU/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K9ac ChIP-seq on embryonic 15.5 day mouse forebrain
experiment encode accession: ENCSR717XCU
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR880HDV
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB635XFX
size range: 300-500

value: forebrain


title: ChIP-seq from liver (ENCLB799PMR)

description:
https://www.encodeproject.org/experiments/ENCSR693UWX/
***************
biological replicate number: 2
technical replicate number: 1
description: H3K4me2 ChIP-seq on embryonic 11.5 day mouse liver
experiment encode accession: ENCSR693UWX
assay title: ChIP-seq
assembly: mm10
possible controls: ENCSR573MJR
encode release date: 2014-06-30
lab: Bing Ren, UCSD
library encode accession: ENCLB799PMR
size range: 300-500

source_name: Mus musculus strain B6NCrl liver tissue mixed sex embryo (11.5 days)

value: tissue

value: Liver from pooled embryonic 11.5 day mice

value: ENCBS522YOW at ENCODE; https://www.encodeproject.org/ENCBS522YOW/


title: ChIP-seq from hindbrain (ENCLB985HRL)

description:
https://www.encodeproject.org/experiments/ENCSR685UUM/
***************
biological replicate number: 1
technical replicate number: 1,2
description: Control ChIP-seq on embryonic 15.5 day mouse hindbrain
experiment encode accession: ENCSR685UUM
assay title: ChIP-seq
encode release date: 2015-11-03
lab: Bing Ren, UCSD
library encode accession: ENCLB985HRL
size range: 300-500
instrument models: Illumina HiSeq 2000,Illumina HiSeq 4000

source_name: Mus musculus strain B6NCrl hindbrain tissue mixed sex embryo (15.5 days)

value: Control

value: hindbrain

value: Hindbrain from 78 embryonic 15.5 day mice

value: embryonic

value: pooled male and female

value: ENCBS958AHU at ENCODE; https://www.encodeproject.org/ENCBS958AHU/


title: microRNA-seq from midbrain (ENCLB718INR)

description:
https://www.encodeproject.org/experiments/ENCSR685OON/
***************
biological replicate number: 2
technical replicate number: 1
description: miRNA-seq on embryonic 15.5 day mouse midbrain
experiment encode accession: ENCSR685OON
assay title: microRNA-seq
assembly: mm10
encode release date: 2016-03-16
lab: Ali Mortazavi, UCI
library encode accession: ENCLB718INR
size range: <30

source_name: Mus musculus strain B6NCrl midbrain tissue mixed sex embryo (15.5 days)

value: midbrain

value: Midbrain from 62 embryonic 15.5 day mice

value: Len Pennacchio, LBNL

value: ENCBS381PEJ at ENCODE; https://www.encodeproject.org/ENCBS381PEJ/