title: Fetal_pancreas_cell_454

description:
Single cell from human fetal pancreas
1000101303.B6


title: Fetal_pancreas_cell_432

status: Public on Jul 14 2019

type: SRA

city: Stockholm

first: Martin

last: Enge

address: CCK, Z4

department: Dep of Oncology-Pathology

country: Sweden

institute: Karolinska Institute

description:
Single cell from human fetal pancreas
1000101303.H7

library_source: transcriptomic

data_processing:
Sequencing reads were trimmed, adapter sequences removed and the reads aligned using STAR with default parameters.
Duplicate reads were removed using picard. Transcript counts were obtained using HT-Seq and hg19 UCSC exon/transcript annotations.
Genome_build: hg19
Supplementary_files_format_and_content: tab-delimited text files with raw read values for each sample

molecule: total RNA

organism: Homo sapiens

source_name: 12wks_fetal pancreas cell_endothelial

extract_protocol: Single-cells were collected  in lysis buffer in 96-well plates, followed by reverse transcription with template-switch using an LNA-modified template switch oligo to generate cDNA. After 21 cycles of pre-amplification, DNA was purified and analyzed on an automated Fragment Analyzer (Advanced Analytical). Each cell’s cDNA fragment profile was individually inspected and only wells with successful amplification products (concentration higher than 0.06 ng/ul) and with no detectable RNA degradation were selected for final library preparation. Tagmentation assays and barcoded sequencing libraries were prepared using Nextera XT kit (FC-131-1024; Illumina) according to the manufacturer’s instructions. Barcoded libraries were pooled and subjected to 75 bp paired-end sequencing on the Illumina NextSeq instrument.

tag: gestational week

tag: gestational day

tag: tissue

value: Fetal pancreas

value: endothelial


title: Fetal_pancreas_cell_429

description:
Single cell from human fetal pancreas
1000101303.A11

source_name: 12wks_fetal pancreas cell_mesenchymal

value: mesenchymal


title: Fetal_pancreas_cell_448

description:
Single cell from human fetal pancreas
1000101401.F11

source_name: 19wks_fetal pancreas cell_mesenchymal


title: Fetal_pancreas_cell_431

description:
Single cell from human fetal pancreas
1000101401.F2


title: Fetal_pancreas_cell_428

description:
Single cell from human fetal pancreas
1000101303.E2

source_name: 12wks_fetal pancreas cell_blood

value: blood


title: Fetal_pancreas_cell_430

description:
Single cell from human fetal pancreas
1000101401.G12

source_name: 19wks_fetal pancreas cell_acinar

value: acinar


title: Fetal_pancreas_cell_433

description:
Single cell from human fetal pancreas
1000101303.F9


title: Fetal_pancreas_cell_426

description:
Single cell from human fetal pancreas
1000101303.D7


title: Fetal_pancreas_cell_427

description:
Single cell from human fetal pancreas
1000101401.B11


title: Fetal_pancreas_cell_422

description:
Single cell from human fetal pancreas
1000101004.H12

source_name: 22wks_fetal pancreas cell_beta

value: beta


title: Fetal_pancreas_cell_423

description:
Single cell from human fetal pancreas
1000101004.E11


title: Fetal_pancreas_cell_420

description:
Single cell from human fetal pancreas
1000101002.B5

source_name: 22wks_fetal pancreas cell_alpha

value: alpha


title: Fetal_pancreas_cell_421

description:
Single cell from human fetal pancreas
1000101004.F2


title: Fetal_pancreas_cell_425

description:
Single cell from human fetal pancreas
1000101004.H3

source_name: 22wks_fetal pancreas cell_acinar


title: Fetal_pancreas_cell_424

description:
Single cell from human fetal pancreas
1000101003.G4


title: Fetal_pancreas_cell_437

description:
Single cell from human fetal pancreas
1000101303.E11


title: Fetal_pancreas_cell_419

description:
Single cell from human fetal pancreas
1000101002.B3


title: Fetal_pancreas_cell_416

description:
Single cell from human fetal pancreas
1000101004.E9


title: Fetal_pancreas_cell_418

description:
Single cell from human fetal pancreas
1000101001.B7

source_name: 22wks_fetal pancreas cell_mesenchymal


title: Fetal_pancreas_cell_417

description:
Single cell from human fetal pancreas
1000101003.G10


title: Fetal_pancreas_cell_415

description:
Single cell from human fetal pancreas
1000101002.B1


title: Fetal_pancreas_cell_413

description:
Single cell from human fetal pancreas
1000101002.B4


title: Fetal_pancreas_cell_414

description:
Single cell from human fetal pancreas
1000101004.H9


title: Fetal_pancreas_cell_411

description:
Single cell from human fetal pancreas
1000101004.H8


title: Fetal_pancreas_cell_412

description:
Single cell from human fetal pancreas
1000101004.G7


title: Fetal_pancreas_cell_436

description:
Single cell from human fetal pancreas
1000101401.B7


title: Fetal_pancreas_cell_410

description:
Single cell from human fetal pancreas
1000101004.F4

source_name: 22wks_fetal pancreas cell_delta

value: delta


title: Fetal_pancreas_cell_406

description:
Single cell from human fetal pancreas
1000100801.D3

source_name: 17wks_fetal pancreas cell_acinar


title: Fetal_pancreas_cell_407

description:
Single cell from human fetal pancreas
1000101004.F12


title: Fetal_pancreas_cell_408

description:
Single cell from human fetal pancreas
1000101003.G7


title: Fetal_pancreas_cell_404

description:
Single cell from human fetal pancreas
1000100801.B7

source_name: 17wks_fetal pancreas cell_ductal

value: ductal


title: Fetal_pancreas_cell_405

description:
Single cell from human fetal pancreas
1000100801.H9


title: Fetal_pancreas_cell_401

description:
Single cell from human fetal pancreas
1000100802.C9

source_name: 17wks_fetal pancreas cell_beta


title: Fetal_pancreas_cell_400

description:
Single cell from human fetal pancreas
1000100802.B3


title: Fetal_pancreas_cell_403

description:
Single cell from human fetal pancreas
1000100801.E6


title: Fetal_pancreas_cell_402

description:
Single cell from human fetal pancreas
1000100803.E4


title: Fetal_pancreas_cell_399

description:
Single cell from human fetal pancreas
1000100803.C11


title: Fetal_pancreas_cell_398

description:
Single cell from human fetal pancreas
1000100801.G9


title: Fetal_pancreas_cell_397

description:
Single cell from human fetal pancreas
1000100802.G8


title: Fetal_pancreas_cell_396

description:
Single cell from human fetal pancreas
1000100803.C3


title: Fetal_pancreas_cell_393

description:
Single cell from human fetal pancreas
1000100801.E1


title: Fetal_pancreas_cell_394

description:
Single cell from human fetal pancreas
1000100803.G1


title: Fetal_pancreas_cell_391

description:
Single cell from human fetal pancreas
1000100801.A2


title: Fetal_pancreas_cell_392

description:
Single cell from human fetal pancreas
1000100802.H5


title: Fetal_pancreas_cell_386

description:
Single cell from human fetal pancreas
1000100803.A8


title: Fetal_pancreas_cell_388

description:
Single cell from human fetal pancreas
1000100802.E11


title: Fetal_pancreas_cell_384

description:
Single cell from human fetal pancreas
1000100801.C8


title: Fetal_pancreas_cell_385

description:
Single cell from human fetal pancreas
1000100802.B2


title: Fetal_pancreas_cell_383

description:
Single cell from human fetal pancreas
1000100802.A3

source_name: 17wks_fetal pancreas cell_delta


title: Fetal_pancreas_cell_381

description:
Single cell from human fetal pancreas
1000100803.H6


title: Fetal_pancreas_cell_409

description:
Single cell from human fetal pancreas
1000101002.B7


title: Fetal_pancreas_cell_380

description:
Single cell from human fetal pancreas
1000100803.D4


title: Fetal_pancreas_cell_382

description:
Single cell from human fetal pancreas
1000100801.C12


title: Fetal_pancreas_cell_376

description:
Single cell from human fetal pancreas
1000100801.C11


title: Fetal_pancreas_cell_378

description:
Single cell from human fetal pancreas
1000100801.C6


title: Fetal_pancreas_cell_379

description:
Single cell from human fetal pancreas
1000100803.H8


title: Fetal_pancreas_cell_395

description:
Single cell from human fetal pancreas
1000100803.A4


title: Fetal_pancreas_cell_369

description:
Single cell from human fetal pancreas
1000100801.H3


title: Fetal_pancreas_cell_390

description:
Single cell from human fetal pancreas
1000100802.B5


title: Fetal_pancreas_cell_370

description:
Single cell from human fetal pancreas
1000100803.H2


title: Fetal_pancreas_cell_371

description:
Single cell from human fetal pancreas
1000100803.E10


title: Fetal_pancreas_cell_375

description:
Single cell from human fetal pancreas
1000100803.B1


title: Fetal_pancreas_cell_373

description:
Single cell from human fetal pancreas
1000100801.H10


title: Fetal_pancreas_cell_387

description:
Single cell from human fetal pancreas
1000100802.C7


title: Fetal_pancreas_cell_389

description:
Single cell from human fetal pancreas
1000100802.C11


title: Fetal_pancreas_cell_365

description:
Single cell from human fetal pancreas
1000100801.E2


title: Fetal_pancreas_cell_364

description:
Single cell from human fetal pancreas
1000100801.G4


title: Fetal_pancreas_cell_363

description:
Single cell from human fetal pancreas
1000100802.C2


title: Fetal_pancreas_cell_362

description:
Single cell from human fetal pancreas
1000100801.H2


title: Fetal_pancreas_cell_361

description:
Single cell from human fetal pancreas
1000100803.C2


title: Fetal_pancreas_cell_355

description:
Single cell from human fetal pancreas
1000100801.D8


title: Fetal_pancreas_cell_357

description:
Single cell from human fetal pancreas
1000100803.G4


title: Fetal_pancreas_cell_358

description:
Single cell from human fetal pancreas
1000100803.G7


title: Fetal_pancreas_cell_359

description:
Single cell from human fetal pancreas
1000100803.C5


title: Fetal_pancreas_cell_356

description:
Single cell from human fetal pancreas
1000100801.B5


title: Fetal_pancreas_cell_377

description:
Single cell from human fetal pancreas
1000100801.G11


title: Fetal_pancreas_cell_372

description:
Single cell from human fetal pancreas
1000100801.A10


title: Fetal_pancreas_cell_354

description:
Single cell from human fetal pancreas
1000100803.D3


title: Fetal_pancreas_cell_351

description:
Single cell from human fetal pancreas
1000100801.C5


title: Fetal_pancreas_cell_352

description:
Single cell from human fetal pancreas
1000100801.G2


title: Fetal_pancreas_cell_353

description:
Single cell from human fetal pancreas
1000100803.G5


title: Fetal_pancreas_cell_350

description:
Single cell from human fetal pancreas
1000100801.D5


title: Fetal_pancreas_cell_367

description:
Single cell from human fetal pancreas
1000100801.G12


title: Fetal_pancreas_cell_349

description:
Single cell from human fetal pancreas
1000100801.E7


title: Fetal_pancreas_cell_348

description:
Single cell from human fetal pancreas
1000100802.D11


title: Fetal_pancreas_cell_368

description:
Single cell from human fetal pancreas
1000100801.H11


title: Fetal_pancreas_cell_347

description:
Single cell from human fetal pancreas
1000100803.D2


title: Fetal_pancreas_cell_360

description:
Single cell from human fetal pancreas
1000100803.A3


title: Fetal_pancreas_cell_343

description:
Single cell from human fetal pancreas
1000100801.E8


title: Fetal_pancreas_cell_340

description:
Single cell from human fetal pancreas
1000100801.G8


title: Fetal_pancreas_cell_344

description:
Single cell from human fetal pancreas
1000100803.E8


title: Fetal_pancreas_cell_346

description:
Single cell from human fetal pancreas
1000100803.C7

source_name: 17wks_fetal pancreas cell_alpha


title: Fetal_pancreas_cell_366

description:
Single cell from human fetal pancreas
1000100801.C2


title: Fetal_pancreas_cell_339

description:
Single cell from human fetal pancreas
1000100801.H4


title: Fetal_pancreas_cell_345

description:
Single cell from human fetal pancreas
1000100802.D7


title: Fetal_pancreas_cell_342

description:
Single cell from human fetal pancreas
1000100801.F2


title: Fetal_pancreas_cell_337

description:
Single cell from human fetal pancreas
1000100801.F11


title: Fetal_pancreas_cell_333

description:
Single cell from human fetal pancreas
1000100803.B11


title: Fetal_pancreas_cell_334

description:
Single cell from human fetal pancreas
1000100801.B8


title: Fetal_pancreas_cell_338

description:
Single cell from human fetal pancreas
1000100802.B6


title: Fetal_pancreas_cell_335

description:
Single cell from human fetal pancreas
1000100803.D1


title: Fetal_pancreas_cell_331

description:
Single cell from human fetal pancreas
1000100802.C4


title: Fetal_pancreas_cell_330

description:
Single cell from human fetal pancreas
1000100803.C8


title: Fetal_pancreas_cell_326

description:
Single cell from human fetal pancreas
1000100802.C3


title: Fetal_pancreas_cell_328

description:
Single cell from human fetal pancreas
1000100801.D4


title: Fetal_pancreas_cell_327

description:
Single cell from human fetal pancreas
1000100803.E1


title: Fetal_pancreas_cell_325

description:
Single cell from human fetal pancreas
1000100801.G3


title: Fetal_pancreas_cell_324

description:
Single cell from human fetal pancreas
1000100801.D12


title: Fetal_pancreas_cell_374

description:
Single cell from human fetal pancreas
1000100803.H10


title: Fetal_pancreas_cell_323

description:
Single cell from human fetal pancreas
1000100801.E12


title: Fetal_pancreas_cell_319

description:
Single cell from human fetal pancreas
1000100801.C9


title: Fetal_pancreas_cell_318

description:
Single cell from human fetal pancreas
1000100801.F10


title: Fetal_pancreas_cell_320

description:
Single cell from human fetal pancreas
1000100801.H7


title: Fetal_pancreas_cell_321

description:
Single cell from human fetal pancreas
1000100801.C1


title: Fetal_pancreas_cell_316

description:
Single cell from human fetal pancreas
1000100803.C9


title: Fetal_pancreas_cell_322

description:
Single cell from human fetal pancreas
1000100803.C6


title: Fetal_pancreas_cell_317

description:
Single cell from human fetal pancreas
1000100801.B2


title: Fetal_pancreas_cell_313

description:
Single cell from human fetal pancreas
1000100801.F7


title: Fetal_pancreas_cell_314

description:
Single cell from human fetal pancreas
1000100803.G11


title: Fetal_pancreas_cell_315

description:
Single cell from human fetal pancreas
1000100801.B4


title: Fetal_pancreas_cell_312

description:
Single cell from human fetal pancreas
1000100802.D4


title: Fetal_pancreas_cell_311

description:
Single cell from human fetal pancreas
1000100802.F8


title: Fetal_pancreas_cell_329

description:
Single cell from human fetal pancreas
1000100803.C12


title: Fetal_pancreas_cell_336

description:
Single cell from human fetal pancreas
1000100803.D7


title: Fetal_pancreas_cell_308

description:
Single cell from human fetal pancreas
1000100802.E10


title: Fetal_pancreas_cell_309

description:
Single cell from human fetal pancreas
1000100803.D10


title: Fetal_pancreas_cell_310

description:
Single cell from human fetal pancreas
1000100802.E1


title: Fetal_pancreas_cell_307

description:
Single cell from human fetal pancreas
1000100802.C1


title: Fetal_pancreas_cell_303

description:
Single cell from human fetal pancreas
1000100901.E6

source_name: 19wks_fetal pancreas cell_ductal


title: Fetal_pancreas_cell_302

description:
Single cell from human fetal pancreas
1000100903.F8

source_name: 19wks_fetal pancreas cell_beta


title: Fetal_pancreas_cell_305

description:
Single cell from human fetal pancreas
1000100901.C7


title: Fetal_pancreas_cell_304

description:
Single cell from human fetal pancreas
1000100901.B8


title: Fetal_pancreas_cell_299

description:
Single cell from human fetal pancreas
1000100903.E9


title: Fetal_pancreas_cell_301

description:
Single cell from human fetal pancreas
1000100901.A6


title: Fetal_pancreas_cell_306

description:
Single cell from human fetal pancreas
1000100901.D10


title: Fetal_pancreas_cell_300

description:
Single cell from human fetal pancreas
1000100902.G5

source_name: 19wks_fetal pancreas cell_alpha


title: Fetal_pancreas_cell_297

description:
Single cell from human fetal pancreas
1000100901.F11


title: Fetal_pancreas_cell_298

description:
Single cell from human fetal pancreas
1000100903.H5


title: Fetal_pancreas_cell_296

description:
Single cell from human fetal pancreas
1000100902.F4


title: Fetal_pancreas_cell_295

description:
Single cell from human fetal pancreas
1000100902.C9


title: Fetal_pancreas_cell_291

description:
Single cell from human fetal pancreas
1000100903.F9


title: Fetal_pancreas_cell_292

description:
Single cell from human fetal pancreas
1000100901.A5


title: Fetal_pancreas_cell_294

description:
Single cell from human fetal pancreas
1000100901.D1


title: Fetal_pancreas_cell_287

description:
Single cell from human fetal pancreas
1000100901.G1


title: Fetal_pancreas_cell_288

description:
Single cell from human fetal pancreas
1000100902.D3


title: Fetal_pancreas_cell_286

description:
Single cell from human fetal pancreas
1000100903.A3


title: Fetal_pancreas_cell_289

description:
Single cell from human fetal pancreas
1000100903.B9


title: Fetal_pancreas_cell_290

description:
Single cell from human fetal pancreas
1000100903.D5


title: Fetal_pancreas_cell_284

description:
Single cell from human fetal pancreas
1000100902.D8


title: Fetal_pancreas_cell_283

description:
Single cell from human fetal pancreas
1000100901.F8


title: Fetal_pancreas_cell_279

description:
Single cell from human fetal pancreas
1000100903.B12


title: Fetal_pancreas_cell_280

description:
Single cell from human fetal pancreas
1000100901.H7


title: Fetal_pancreas_cell_332

description:
Single cell from human fetal pancreas
1000100803.H11


title: Fetal_pancreas_cell_282

description:
Single cell from human fetal pancreas
1000100902.C1


title: Fetal_pancreas_cell_278

description:
Single cell from human fetal pancreas
1000100902.H6


title: Fetal_pancreas_cell_285

description:
Single cell from human fetal pancreas
1000100903.E11


title: Fetal_pancreas_cell_276

description:
Single cell from human fetal pancreas
1000100901.D2


title: Fetal_pancreas_cell_274

description:
Single cell from human fetal pancreas
1000100902.E12


title: Fetal_pancreas_cell_275

description:
Single cell from human fetal pancreas
1000100902.C6


title: Fetal_pancreas_cell_293

description:
Single cell from human fetal pancreas
1000100903.G12


title: Fetal_pancreas_cell_268

description:
Single cell from human fetal pancreas
1000100902.E10


title: Fetal_pancreas_cell_259

description:
Single cell from human fetal pancreas
1000100901.H6


title: Fetal_pancreas_cell_263

description:
Single cell from human fetal pancreas
1000100902.E5


title: Fetal_pancreas_cell_273

description:
Single cell from human fetal pancreas
1000100903.A2


title: Fetal_pancreas_cell_272

description:
Single cell from human fetal pancreas
1000100901.D11


title: Fetal_pancreas_cell_266

description:
Single cell from human fetal pancreas
1000100903.A6


title: Fetal_pancreas_cell_265

description:
Single cell from human fetal pancreas
1000100903.C9


title: Fetal_pancreas_cell_270

description:
Single cell from human fetal pancreas
1000100903.A1


title: Fetal_pancreas_cell_267

description:
Single cell from human fetal pancreas
1000100901.B12


title: Fetal_pancreas_cell_269

description:
Single cell from human fetal pancreas
1000100902.B6


title: Fetal_pancreas_cell_271

description:
Single cell from human fetal pancreas
1000100902.F1


title: Fetal_pancreas_cell_261

description:
Single cell from human fetal pancreas
1000100903.F10


title: Fetal_pancreas_cell_262

description:
Single cell from human fetal pancreas
1000100902.A2


title: Fetal_pancreas_cell_260

description:
Single cell from human fetal pancreas
1000100903.A9


title: Fetal_pancreas_cell_258

description:
Single cell from human fetal pancreas
1000100901.A1


title: Fetal_pancreas_cell_277

description:
Single cell from human fetal pancreas
1000100902.C2


title: Fetal_pancreas_cell_281

description:
Single cell from human fetal pancreas
1000100901.A3


title: Fetal_pancreas_cell_257

description:
Single cell from human fetal pancreas
1000100902.G6


title: Fetal_pancreas_cell_256

description:
Single cell from human fetal pancreas
1000100902.C5


title: Fetal_pancreas_cell_255

description:
Single cell from human fetal pancreas
1000100903.B4


title: Fetal_pancreas_cell_253

description:
Single cell from human fetal pancreas
1000100903.C3


title: Fetal_pancreas_cell_254

description:
Single cell from human fetal pancreas
1000100901.B5


title: Fetal_pancreas_cell_264

description:
Single cell from human fetal pancreas
1000100903.G7


title: Fetal_pancreas_cell_252

description:
Single cell from human fetal pancreas
1000100902.G10


title: Fetal_pancreas_cell_250

description:
Single cell from human fetal pancreas
1000100902.G7


title: Fetal_pancreas_cell_251

description:
Single cell from human fetal pancreas
1000100901.G5


title: Fetal_pancreas_cell_248

description:
Single cell from human fetal pancreas
1000100902.C12


title: Fetal_pancreas_cell_247

description:
Single cell from human fetal pancreas
1000100903.D8


title: Fetal_pancreas_cell_246

description:
Single cell from human fetal pancreas
1000100903.A8


title: Fetal_pancreas_cell_245

description:
Single cell from human fetal pancreas
1000100902.H4


title: Fetal_pancreas_cell_249

description:
Single cell from human fetal pancreas
1000100902.F3


title: Fetal_pancreas_cell_243

description:
Single cell from human fetal pancreas
1000100901.D4


title: Fetal_pancreas_cell_237

description:
Single cell from human fetal pancreas
1000100902.D4


title: Fetal_pancreas_cell_240

description:
Single cell from human fetal pancreas
1000100902.B11


title: Fetal_pancreas_cell_242

description:
Single cell from human fetal pancreas
1000100903.C4


title: Fetal_pancreas_cell_238

description:
Single cell from human fetal pancreas
1000100902.H9


title: Fetal_pancreas_cell_236

description:
Single cell from human fetal pancreas
1000100903.H4


title: Fetal_pancreas_cell_235

description:
Single cell from human fetal pancreas
1000100903.E12


title: Fetal_pancreas_cell_241

description:
Single cell from human fetal pancreas
1000100902.F6


title: Fetal_pancreas_cell_244

description:
Single cell from human fetal pancreas
1000100902.B10


title: Fetal_pancreas_cell_341

description:
Single cell from human fetal pancreas
1000100801.E10


title: Fetal_pancreas_cell_233

description:
Single cell from human fetal pancreas
1000100903.G1


title: Fetal_pancreas_cell_232

description:
Single cell from human fetal pancreas
1000100501.A3

source_name: 12wks_fetal pancreas cell_alpha


title: Fetal_pancreas_cell_230

description:
Single cell from human fetal pancreas
1000100302.F11

source_name: 12wks_fetal pancreas cell_ductal


title: Fetal_pancreas_cell_231

description:
Single cell from human fetal pancreas
1000100302.D7

source_name: 12wks_fetal pancreas cell_acinar


title: Fetal_pancreas_cell_229

description:
Single cell from human fetal pancreas
1000100301.C5


title: Fetal_pancreas_cell_223

description:
Single cell from human fetal pancreas
1000100302.H11


title: Fetal_pancreas_cell_225

description:
Single cell from human fetal pancreas
1000100301.C1


title: Fetal_pancreas_cell_224

description:
Single cell from human fetal pancreas
1000100301.H4


title: Fetal_pancreas_cell_222

description:
Single cell from human fetal pancreas
1000100302.A5


title: Fetal_pancreas_cell_234

description:
Single cell from human fetal pancreas
1000100903.H7


title: Fetal_pancreas_cell_226

description:
Single cell from human fetal pancreas
1000100302.G12


title: Fetal_pancreas_cell_221

description:
Single cell from human fetal pancreas
1000100502.H9


title: Fetal_pancreas_cell_219

description:
Single cell from human fetal pancreas
1000100301.A6


title: Fetal_pancreas_cell_239

description:
Single cell from human fetal pancreas
1000100902.H7

source_name: 19wks_fetal pancreas cell_acinar


title: Fetal_pancreas_cell_216

description:
Single cell from human fetal pancreas
1000100501.G2

source_name: 12wks_fetal pancreas cell_beta


title: Fetal_pancreas_cell_220

description:
Single cell from human fetal pancreas
1000100501.E10


title: Fetal_pancreas_cell_214

description:
Single cell from human fetal pancreas
1000100302.G4


title: Fetal_pancreas_cell_217

description:
Single cell from human fetal pancreas
1000100502.H11


title: Fetal_pancreas_cell_211

description:
Single cell from human fetal pancreas
1000100501.A10


title: Fetal_pancreas_cell_212

description:
Single cell from human fetal pancreas
1000100501.H7


title: Fetal_pancreas_cell_218

description:
Single cell from human fetal pancreas
1000100501.G3


title: Fetal_pancreas_cell_209

description:
Single cell from human fetal pancreas
1000100301.E6


title: Fetal_pancreas_cell_210

description:
Single cell from human fetal pancreas
1000100302.B10


title: Fetal_pancreas_cell_206

description:
Single cell from human fetal pancreas
1000100501.D9


title: Fetal_pancreas_cell_208

description:
Single cell from human fetal pancreas
1000100301.B5


title: Fetal_pancreas_cell_228

description:
Single cell from human fetal pancreas
1000100501.F4


title: Fetal_pancreas_cell_227

description:
Single cell from human fetal pancreas
1000100501.B6


title: Fetal_pancreas_cell_204

description:
Single cell from human fetal pancreas
1000100301.H5


title: Fetal_pancreas_cell_203

description:
Single cell from human fetal pancreas
1000100302.A7


title: Fetal_pancreas_cell_201

description:
Single cell from human fetal pancreas
1000100301.G4


title: Fetal_pancreas_cell_202

description:
Single cell from human fetal pancreas
1000100302.A6


title: Fetal_pancreas_cell_199

description:
Single cell from human fetal pancreas
1000100501.A5


title: Fetal_pancreas_cell_197

description:
Single cell from human fetal pancreas
1000100301.G5


title: Fetal_pancreas_cell_196

description:
Single cell from human fetal pancreas
1000100502.B8


title: Fetal_pancreas_cell_198

description:
Single cell from human fetal pancreas
1000100301.F10


title: Fetal_pancreas_cell_194

description:
Single cell from human fetal pancreas
1000100502.B11


title: Fetal_pancreas_cell_200

description:
Single cell from human fetal pancreas
1000100501.F9


title: Fetal_pancreas_cell_207

description:
Single cell from human fetal pancreas
1000100502.B1


title: Fetal_pancreas_cell_215

description:
Single cell from human fetal pancreas
1000100302.F6


title: Fetal_pancreas_cell_213

description:
Single cell from human fetal pancreas
1000100301.H3


title: Fetal_pancreas_cell_193

description:
Single cell from human fetal pancreas
1000100302.A11


title: Fetal_pancreas_cell_192

description:
Single cell from human fetal pancreas
1000100302.G3


title: Fetal_pancreas_cell_191

description:
Single cell from human fetal pancreas
1000100302.D10


title: Fetal_pancreas_cell_190

description:
Single cell from human fetal pancreas
1000100302.D6


title: Fetal_pancreas_cell_189

description:
Single cell from human fetal pancreas
1000100501.E11


title: Fetal_pancreas_cell_187

description:
Single cell from human fetal pancreas
1000100502.E8


title: Fetal_pancreas_cell_186

description:
Single cell from human fetal pancreas
1000100502.G6


title: Fetal_pancreas_cell_185

description:
Single cell from human fetal pancreas
1000100301.B6


title: Fetal_pancreas_cell_184

description:
Single cell from human fetal pancreas
1000100502.D2


title: Fetal_pancreas_cell_188

description:
Single cell from human fetal pancreas
1000100302.G9


title: Fetal_pancreas_cell_205

description:
Single cell from human fetal pancreas
1000100301.A4


title: Fetal_pancreas_cell_181

description:
Single cell from human fetal pancreas
1000100501.G12


title: Fetal_pancreas_cell_180

description:
Single cell from human fetal pancreas
1000100302.B4


title: Fetal_pancreas_cell_183

description:
Single cell from human fetal pancreas
1000100501.A1


title: Fetal_pancreas_cell_177

description:
Single cell from human fetal pancreas
1000100502.E2


title: Fetal_pancreas_cell_179

description:
Single cell from human fetal pancreas
1000100301.A10


title: Fetal_pancreas_cell_176

description:
Single cell from human fetal pancreas
1000100302.A9


title: Fetal_pancreas_cell_175

description:
Single cell from human fetal pancreas
1000100502.C8


title: Fetal_pancreas_cell_178

description:
Single cell from human fetal pancreas
1000100501.D11


title: Fetal_pancreas_cell_195

description:
Single cell from human fetal pancreas
1000100301.E9


title: Fetal_pancreas_cell_172

description:
Single cell from human fetal pancreas
1000100501.B9


title: Fetal_pancreas_cell_170

description:
Single cell from human fetal pancreas
1000100301.B1


title: Fetal_pancreas_cell_169

description:
Single cell from human fetal pancreas
1000100302.C2


title: Fetal_pancreas_cell_171

description:
Single cell from human fetal pancreas
1000100301.F8


title: Fetal_pancreas_cell_173

description:
Single cell from human fetal pancreas
1000100301.F3


title: Fetal_pancreas_cell_174

description:
Single cell from human fetal pancreas
1000100302.F7


title: Fetal_pancreas_cell_166

description:
Single cell from human fetal pancreas
1000100502.F10


title: Fetal_pancreas_cell_168

description:
Single cell from human fetal pancreas
1000100502.E6


title: Fetal_pancreas_cell_164

description:
Single cell from human fetal pancreas
1000100301.H12


title: Fetal_pancreas_cell_165

description:
Single cell from human fetal pancreas
1000100301.C11


title: Fetal_pancreas_cell_167

description:
Single cell from human fetal pancreas
1000100302.C11


title: Fetal_pancreas_cell_182

description:
Single cell from human fetal pancreas
1000100501.A7


title: Fetal_pancreas_cell_163

description:
Single cell from human fetal pancreas
1000100302.C5


title: Fetal_pancreas_cell_161

description:
Single cell from human fetal pancreas
1000100301.D10


title: Fetal_pancreas_cell_162

description:
Single cell from human fetal pancreas
1000100502.D3


title: Fetal_pancreas_cell_160

description:
Single cell from human fetal pancreas
1000100302.F10

source_name: 12wks_fetal pancreas cell_delta


title: Fetal_pancreas_cell_159

description:
Single cell from human fetal pancreas
1000100301.C9


title: Fetal_pancreas_cell_156

description:
Single cell from human fetal pancreas
1000100501.G8


title: Fetal_pancreas_cell_154

description:
Single cell from human fetal pancreas
1000100302.E10


title: Fetal_pancreas_cell_153

description:
Single cell from human fetal pancreas
1000100302.F4


title: Fetal_pancreas_cell_152

description:
Single cell from human fetal pancreas
1000100501.A9


title: Fetal_pancreas_cell_158

description:
Single cell from human fetal pancreas
1000100302.E2


title: Fetal_pancreas_cell_155

description:
Single cell from human fetal pancreas
1000100301.D2


title: Fetal_pancreas_cell_150

description:
Single cell from human fetal pancreas
1000100501.A6


title: Fetal_pancreas_cell_149

description:
Single cell from human fetal pancreas
1000100502.C5


title: Fetal_pancreas_cell_151

description:
Single cell from human fetal pancreas
1000100302.H1


title: Fetal_pancreas_cell_148

description:
Single cell from human fetal pancreas
1000100301.H7


title: Fetal_pancreas_cell_147

description:
Single cell from human fetal pancreas
1000100502.C9


title: Fetal_pancreas_cell_146

description:
Single cell from human fetal pancreas
1000100302.B7


title: Fetal_pancreas_cell_141

description:
Single cell from human fetal pancreas
1000100501.G1


title: Fetal_pancreas_cell_140

description:
Single cell from human fetal pancreas
1000100501.G11


title: Fetal_pancreas_cell_145

description:
Single cell from human fetal pancreas
1000100501.E8


title: Fetal_pancreas_cell_139

description:
Single cell from human fetal pancreas
1000100502.G3


title: Fetal_pancreas_cell_144

description:
Single cell from human fetal pancreas
1000100501.H3


title: Fetal_pancreas_cell_138

description:
Single cell from human fetal pancreas
1000100502.E7


title: Fetal_pancreas_cell_142

description:
Single cell from human fetal pancreas
1000100501.C11


title: Fetal_pancreas_cell_157

description:
Single cell from human fetal pancreas
1000100301.F5


title: Fetal_pancreas_cell_136

description:
Single cell from human fetal pancreas
1000100301.D12


title: Fetal_pancreas_cell_135

description:
Single cell from human fetal pancreas
1000100501.B5


title: Fetal_pancreas_cell_133

description:
Single cell from human fetal pancreas
1000100302.G8


title: Fetal_pancreas_cell_134

description:
Single cell from human fetal pancreas
1000100302.E1


title: Fetal_pancreas_cell_131

description:
Single cell from human fetal pancreas
1000100501.H8


title: Fetal_pancreas_cell_132

description:
Single cell from human fetal pancreas
1000100502.C6


title: Fetal_pancreas_cell_137

description:
Single cell from human fetal pancreas
1000100301.F2


title: Fetal_pancreas_cell_130

description:
Single cell from human fetal pancreas
1000100502.F2


title: Fetal_pancreas_cell_129

description:
Single cell from human fetal pancreas
1000100502.H12


title: Fetal_pancreas_cell_127

description:
Single cell from human fetal pancreas
1000100302.C10


title: Fetal_pancreas_cell_125

description:
Single cell from human fetal pancreas
1000100501.B3


title: Fetal_pancreas_cell_126

description:
Single cell from human fetal pancreas
1000100301.D6


title: Fetal_pancreas_cell_123

description:
Single cell from human fetal pancreas
1000100502.H7


title: Fetal_pancreas_cell_122

description:
Single cell from human fetal pancreas
1000100501.D4


title: Fetal_pancreas_cell_124

description:
Single cell from human fetal pancreas
1000100302.E5


title: Fetal_pancreas_cell_118

description:
Single cell from human fetal pancreas
1000100502.A8


title: Fetal_pancreas_cell_119

description:
Single cell from human fetal pancreas
1000100502.A2


title: Fetal_pancreas_cell_120

description:
Single cell from human fetal pancreas
1000100502.A11


title: Fetal_pancreas_cell_117

description:
Single cell from human fetal pancreas
1000100502.F7


title: Fetal_pancreas_cell_143

description:
Single cell from human fetal pancreas
1000100502.H4


title: Fetal_pancreas_cell_115

description:
Single cell from human fetal pancreas
1000100502.C1


title: Fetal_pancreas_cell_116

description:
Single cell from human fetal pancreas
1000100502.F6


title: Fetal_pancreas_cell_114

description:
Single cell from human fetal pancreas
1000100502.G5


title: Fetal_pancreas_cell_128

description:
Single cell from human fetal pancreas
1000100501.D10


title: Fetal_pancreas_cell_111

description:
Single cell from human fetal pancreas
1000100302.B6


title: Fetal_pancreas_cell_113

description:
Single cell from human fetal pancreas
1000100502.A9


title: Fetal_pancreas_cell_107

description:
Single cell from human fetal pancreas
1000100501.H5


title: Fetal_pancreas_cell_110

description:
Single cell from human fetal pancreas
1000100302.H6


title: Fetal_pancreas_cell_109

description:
Single cell from human fetal pancreas
1000100301.F4


title: Fetal_pancreas_cell_112

description:
Single cell from human fetal pancreas
1000100301.F6


title: Fetal_pancreas_cell_121

description:
Single cell from human fetal pancreas
1000100302.E11


title: Fetal_pancreas_cell_103

description:
Single cell from human fetal pancreas
1000100302.A3


title: Fetal_pancreas_cell_105

description:
Single cell from human fetal pancreas
1000100501.E1


title: Fetal_pancreas_cell_104

description:
Single cell from human fetal pancreas
1000100501.D1


title: Fetal_pancreas_cell_99

description:
Single cell from human fetal pancreas
1000100302.H8


title: Fetal_pancreas_cell_96

description:
Single cell from human fetal pancreas
1000100301.D8


title: Fetal_pancreas_cell_95

description:
Single cell from human fetal pancreas
1000100301.F11


title: Fetal_pancreas_cell_97

description:
Single cell from human fetal pancreas
1000100301.C10


title: Fetal_pancreas_cell_102

description:
Single cell from human fetal pancreas
1000100302.C9


title: Fetal_pancreas_cell_98

description:
Single cell from human fetal pancreas
1000100302.F5


title: Fetal_pancreas_cell_101

description:
Single cell from human fetal pancreas
1000100501.H1


title: Fetal_pancreas_cell_106

description:
Single cell from human fetal pancreas
1000100501.C6


title: Fetal_pancreas_cell_93

description:
Single cell from human fetal pancreas
1000100302.A2


title: Fetal_pancreas_cell_92

description:
Single cell from human fetal pancreas
1000100501.D2


title: Fetal_pancreas_cell_91

description:
Single cell from human fetal pancreas
1000100302.F3


title: Fetal_pancreas_cell_94

description:
Single cell from human fetal pancreas
1000100301.C3


title: Fetal_pancreas_cell_90

description:
Single cell from human fetal pancreas
1000100502.H6


title: Fetal_pancreas_cell_89

description:
Single cell from human fetal pancreas
1000100301.B12


title: Fetal_pancreas_cell_88

description:
Single cell from human fetal pancreas
1000100301.G8


title: Fetal_pancreas_cell_108

description:
Single cell from human fetal pancreas
1000100301.A7


title: Fetal_pancreas_cell_86

description:
Single cell from human fetal pancreas
1000100301.A5


title: Fetal_pancreas_cell_87

description:
Single cell from human fetal pancreas
1000100502.C2


title: Fetal_pancreas_cell_100

description:
Single cell from human fetal pancreas
1000100502.C7


title: Fetal_pancreas_cell_85

description:
Single cell from human fetal pancreas
1000100501.D6


title: Fetal_pancreas_cell_83

description:
Single cell from human fetal pancreas
1000100302.F1


title: Fetal_pancreas_cell_84

description:
Single cell from human fetal pancreas
1000100302.E7


title: Fetal_pancreas_cell_82

description:
Single cell from human fetal pancreas
1000100301.H9


title: Fetal_pancreas_cell_80

description:
Single cell from human fetal pancreas
1000100502.E10


title: Fetal_pancreas_cell_79

description:
Single cell from human fetal pancreas
1000100302.D8


title: Fetal_pancreas_cell_78

description:
Single cell from human fetal pancreas
1000100502.E11


title: Fetal_pancreas_cell_77

description:
Single cell from human fetal pancreas
1000100302.D2


title: Fetal_pancreas_cell_76

description:
Single cell from human fetal pancreas
1000100302.G11


title: Fetal_pancreas_cell_81

description:
Single cell from human fetal pancreas
1000100501.H10


title: Fetal_pancreas_cell_71

description:
Single cell from human fetal pancreas
1000100502.C11


title: Fetal_pancreas_cell_75

description:
Single cell from human fetal pancreas
1000100301.G11


title: Fetal_pancreas_cell_73

description:
Single cell from human fetal pancreas
1000100302.C8


title: Fetal_pancreas_cell_63

description:
Single cell from human fetal pancreas
1000100301.F7


title: Fetal_pancreas_cell_70

description:
Single cell from human fetal pancreas
1000100502.H2


title: Fetal_pancreas_cell_67

description:
Single cell from human fetal pancreas
1000100501.E2


title: Fetal_pancreas_cell_66

description:
Single cell from human fetal pancreas
1000100502.B3


title: Fetal_pancreas_cell_64

description:
Single cell from human fetal pancreas
1000100301.A1


title: Fetal_pancreas_cell_62

description:
Single cell from human fetal pancreas
1000100502.C12


title: Fetal_pancreas_cell_61

description:
Single cell from human fetal pancreas
1000100501.B12


title: Fetal_pancreas_cell_72

description:
Single cell from human fetal pancreas
1000100502.B2


title: Fetal_pancreas_cell_60

description:
Single cell from human fetal pancreas
1000100501.C1


title: Fetal_pancreas_cell_65

description:
Single cell from human fetal pancreas
1000100302.F8


title: Fetal_pancreas_cell_59

description:
Single cell from human fetal pancreas
1000100301.H1


title: Fetal_pancreas_cell_55

description:
Single cell from human fetal pancreas
1000100302.E9


title: Fetal_pancreas_cell_56

description:
Single cell from human fetal pancreas
1000100301.E3


title: Fetal_pancreas_cell_58

description:
Single cell from human fetal pancreas
1000100302.D1


title: Fetal_pancreas_cell_54

description:
Single cell from human fetal pancreas
1000100301.G6


title: Fetal_pancreas_cell_52

description:
Single cell from human fetal pancreas
1000100301.C7


title: Fetal_pancreas_cell_53

description:
Single cell from human fetal pancreas
1000100502.A6


title: Fetal_pancreas_cell_51

description:
Single cell from human fetal pancreas
1000100302.B11


title: Fetal_pancreas_cell_68

description:
Single cell from human fetal pancreas
1000100302.C3


title: Fetal_pancreas_cell_69

description:
Single cell from human fetal pancreas
1000100301.F12


title: Fetal_pancreas_cell_74

description:
Single cell from human fetal pancreas
1000100501.E5


title: Fetal_pancreas_cell_48

description:
Single cell from human fetal pancreas
1000100301.B3


title: Fetal_pancreas_cell_47

description:
Single cell from human fetal pancreas
1000100302.C1


title: Fetal_pancreas_cell_46

description:
Single cell from human fetal pancreas
1000100501.A11


title: Fetal_pancreas_cell_49

description:
Single cell from human fetal pancreas
1000100501.E4


title: Fetal_pancreas_cell_43

description:
Single cell from human fetal pancreas
1000100301.E1


title: Fetal_pancreas_cell_39

description:
Single cell from human fetal pancreas
1000100302.A10


title: Fetal_pancreas_cell_41

description:
Single cell from human fetal pancreas
1000100502.D8


title: Fetal_pancreas_cell_45

description:
Single cell from human fetal pancreas
1000100502.A10


title: Fetal_pancreas_cell_38

description:
Single cell from human fetal pancreas
1000100501.C3


title: Fetal_pancreas_cell_36

description:
Single cell from human fetal pancreas
1000100502.D6


title: Fetal_pancreas_cell_35

description:
Single cell from human fetal pancreas
1000100301.A3


title: Fetal_pancreas_cell_57

description:
Single cell from human fetal pancreas
1000100301.A8


title: Fetal_pancreas_cell_50

description:
Single cell from human fetal pancreas
1000100502.D10


title: Fetal_pancreas_cell_33

description:
Single cell from human fetal pancreas
1000100501.B1


title: Fetal_pancreas_cell_44

description:
Single cell from human fetal pancreas
1000100301.A2


title: Fetal_pancreas_cell_34

description:
Single cell from human fetal pancreas
1000100502.D12


title: Fetal_pancreas_cell_32

description:
Single cell from human fetal pancreas
1000100301.G2


title: Fetal_pancreas_cell_31

description:
Single cell from human fetal pancreas
1000100302.D9


title: Fetal_pancreas_cell_42

description:
Single cell from human fetal pancreas
1000100302.E3


title: Fetal_pancreas_cell_40

description:
Single cell from human fetal pancreas
1000100301.B11


title: Fetal_pancreas_cell_29

description:
Single cell from human fetal pancreas
1000100301.D5


title: Fetal_pancreas_cell_30

description:
Single cell from human fetal pancreas
1000100502.E4


title: Fetal_pancreas_cell_37

description:
Single cell from human fetal pancreas
1000100502.A3


title: BC-3 cells plus VPA, total IGG (rabbit)

city: Newark

first: David

middle: M.

last: Lukac

state: NJ

address: 225 Warren St.; ICPH E350C; PO Box 1709

department: Microbiology, Biochemistry and Molecular Genetics

country: USA

institute: Rutgers Univ./NJ Medical School

description: viral DNA reads submitted here

library_source: genomic

data_processing:
Basecalls were made using LifeScope
Reads were quality trimmed at 3' end to at least 20 using the FastX toolkit
Reads were mapped to U75698 KSHV genome using Bowtie2 with default parameters
Correctly paired/mapped reads were filtered, and duplicate reads deleted, using SAM Tools
Peaks were called using MACS2 using default settings and local lambda disabled
Genome_build: gi|2065526|gb|U75698.1|KSU75698
Supplementary_files_format_and_content: bedgraph for output peaks

molecule: genomic DNA

source_name: Primary effusion lymphoma (PEL) cell line

extract_protocol:
Chromatin was sheared by sonication  (BioRuptorTM; Diagenode) in 2 mL Buffer III (1% SDS, 10 mM EDTA, 50 mM Tris-HCl) for 8 eight minute cycles, 30 seconds on/off, each, to an average size of 200 bp in 15 ml polystyrene tubes.  Cell debris was removed by centrifugation at full speed for 10 min at 4°C.  The chromatin supernatants were divided into approximately 300ul aliquots (1x106 cells), which were increased in volume to 2 mL in ChIP pre-clearing buffer (0.01 % SDS, 1.1 % Triton X-100, 1.2 mM Tris-HCl, 167 mM NaCl) {Carey, 2009 #743} to a final volume of 2 mL for individual samples. Samples were pre-cleared with 60ul of Protein A Agarose/Salmon sperm DNA beads (Millipore) for 1 hour at 4°C with nutation. Chromatin was IP'd with anti-Rta (custom), anti-RBP-Jk (Millipore, AB5790), or total rabbit IGG (Sigma, 15006).
5500 SOLiD™ Fragment Library Core Kit (Applied Biosystems) manufacturer's protocol

tag: cell line name

tag: viral infection

value: reactivated

tag: antibody

value: IGG


title: Fetal_pancreas_cell_28

description:
Single cell from human fetal pancreas
1000100302.H3


title: BC-3 cells minus VPA, total IGG (rabbit)

description: viral DNA reads submitted here

value: latent


title: BC-3 cells minus VPA, anti-RBP-Jk

description: viral DNA reads submitted here

value: anti-RBP-Jk


title: BC-3 cells plus VPA, anti-RBP-Jk

description: viral DNA reads submitted here


title: Fetal_pancreas_cell_27

description:
Single cell from human fetal pancreas
1000100302.G5


title: BC-3 cells plus VPA, anti-Rta

description: viral DNA reads submitted here

value: anti-Rta


title: Fetal_pancreas_cell_26

description:
Single cell from human fetal pancreas
1000100302.H9


title: Fetal_pancreas_cell_25

description:
Single cell from human fetal pancreas
1000100501.E9


title: Fetal_pancreas_cell_24

description:
Single cell from human fetal pancreas
1000100501.F3


title: Fetal_pancreas_cell_23

description:
Single cell from human fetal pancreas
1000100302.D4


title: HS-5_coculture with CLL cells_6h_rep1

type: RNA

city: Ulm

first: Deyan

middle: Yordanov

last: Yosifov

address: Albert-Einstein-Allee 23

department: Internal Medicine III

country: Germany

institute: University Hospital Ulm

description: replicate 1

hyb_protocol: Standard Illumina hybridization protocol. Microarrays were washed twice in E1BC buffer (Illumina Inc.) at room temperature for 5 minutes. After blocking for 5 min in 4 ml of 1% (wt/vol) Blocker Casein in phosphate buffered saline Hammarsten grade (Pierce Biotechnology, Inc., Rockford, IL), array signals were developed by a 10-min incubation in 2 ml of 1 µg/ml Cy3-streptavidin (Amersham Biosciences, Buckinghamshire, UK) solution and 1% blocking solution. After a final wash in E1BC, the arrays were dried and scanned.

scan_protocol: Standard Illumina scanning protocol

data_processing: Data extraction was done for all beads individually, and outliers were removed when the median absolute deviation (MAD) was above 2.5. All remaining data points were used for the calculation of the mean average signal for a given probe, and standard deviation for each probe was calculated. Data analysis was done by normalization of the signals using the quantile normalization algorithm without background subtraction.

label: biotin

source_name: HS-5 cells, cocultured with CD19-positive PBMCs from a CLL patient, 6h

label_protocol: Biotinylated cRNA were prepared with the Ambion MessageAmp II aRNA amplification kit.

extract_protocol: RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.

tag: cell type

tag: culture condition

value: DMEM

tag: time, h


title: PreGM flox/flox;Mx1Cre 18 day post pIC rep2

city: Copenhagen

first: Nicolas

last: Rapin

address: Ole Maaloes vej 5

department: Finsen Laboratory

country: Denmark

institute: Copenhagen University

hyb_protocol: Affymetrix EukGE-WS2v4_450 Hybridization protocol, according to manufacturers specifications

scan_protocol: standard Affymetrix protocol

data_processing: Cell intesity files (CEL files) were generated in the Genechip Command Console Software (AGCC), (Affymetrix, Santa Clara, CA, USA). The data was normalized using the RMA function from the Bioconductor package affy in R.

organism: Mus musculus

source_name: Sorted PreGM (Lin-Sca1-Kit+CD150-41-FcgRII-Endog-) from bone marrow samples, 18 days post conditional gene knock out

label_protocol: Affymetrix protocol

growth_protocol: Murine bone marrow cells were enriched for cKit+ and hematopoietic stem cells were sorted by FACS.

extract_protocol: Total RNA from sorted cells were isolated with RNeasy Micro Kit (Qiagen). Samples were prepared in triplicates for each genotype. 20 ng of total RNA was amplified using Ovation Pico WTA system V2 (Nugene)according to manufactures instructions. www.nugeninc.com/nugen/index.cfm/products/cs/microarrays-and-qpcr/ovation-pico-wta-system-v2/manufacturers instructions.

treatment_protocol: Female mice were injected with pIC, at day 18 they were sacrifized and bones were dissected, bone marrow cells were isolated by crushing and PreGMs were sorted by FACS.

tag: Sex

value: Female

tag: strain

value: Bone marrow cells, PreGMs

tag: genotype

tag: cell population


title: CLL_coculture with M2-10B4_24h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 24h

value: CD19-positive PBMCs from a CLL patient

value: M2-10B4 coculture


title: HS-5_0h_rep1

description: replicate 1

source_name: HS-5 cells, 0h


title: Fetal_pancreas_cell_22

description:
Single cell from human fetal pancreas
1000100501.D5

value: Fetal pancreas


title: CLL_DMEM_3h_rep2

description: replicate 2

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 3h


title: CLL_HS-5 conditioned medium_2h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, HS-5 conditioned medium, 2h

value: HS-5 conditioned medium


title: CLL_coculture with HS-5_30min_rep2

description: replicate 2

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 30min

value: HS-5 coculture


title: M2-10B4_0h_rep1

description: replicate 1

source_name: M2-10B4 cells, 0h


title: CLL_HS-5 conditioned medium_30min_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, HS-5 conditioned medium, 30min


title: CLL_DMEM_24h_wash_DMEM_24h_rep2

description: replicate 2

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 24h, washed, cultured in DMEM again, 24h

value: DMEM/DMEM


title: CLL_coculture with M2-10B4_8h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 8h


title: CLL_coculture with M2-10B4_48h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 48h


title: CLL_coculture with M2-10B4_6h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 6h


title: PreGM flox/flox;Mx1Cre 18 day post pIC rep1


title: CLL_DMEM_4h_rep2

description: replicate 2

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 4h


title: PreGM flox/flox;Mx1Cre 18 day post pIC rep3


title: Fetal_pancreas_cell_21

description:
Single cell from human fetal pancreas
1000100302.B2

source_name: 12wks_fetal pancreas cell_ductal


title: PreGM flox/flox 18 days post pIC rep2

value: Cebpa flox/flox


title: CLL_coculture with M2-10B4_2h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 2h


title: CLL_coculture with M2-10B4_24h_wash_DMEM_24h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 24h, washed, cultured in DMEM, 24h

value: M2-10B4 coculture/DMEM


title: Fetal_pancreas_cell_20

description:
Single cell from human fetal pancreas
1000100302.G6

value: ductal


title: HS-5_coculture with CLL cells_24h_rep1

description: replicate 1

source_name: HS-5 cells, cocultured with CD19-positive PBMCs from a CLL patient, 24h


title: CLL_coculture with M2-10B4_4h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 4h


title: PreGM flox/flox 18 days post pIC rep1

source_name: Sorted PreGM (Lin-Sca1-Kit+CD150-41-FcgRII-Endog-) from bone marrow samples, 18 days post conditional gene knock out


title: Fetal_pancreas_cell_18

description:
Single cell from human fetal pancreas
1000100502.E5


title: Fetal_pancreas_cell_17

description:
Single cell from human fetal pancreas
1000100501.C5

source_name: 12wks_fetal pancreas cell_beta

value: beta


title: Fetal_pancreas_cell_16

description:
Single cell from human fetal pancreas
1000100301.D4


title: S132 pos

city: Bethesda

first: WeiPing

last: Chen

state: MD

address: Bldg 8, Room 1A11, NIDDK/NIH

department: GCL

institute: NIDDK/NIH

hyb_protocol: Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip expression   Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.

scan_protocol: GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.

data_processing: The data were normalized by RMA with Partek Genomic Suit 6.6

source_name: primary hcSCC tumors

label_protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

extract_protocol:
mRNA is  converted to cDNA and amplified using NuGEN pico amplification kit
sorting from primary hcSCC tumors by CD133+ or CD133- as the source for RNA.
Trizol extraction of total RNA was performed according to the manufacturer's instructions.

value: cutaneous squamous cell carcinoma

tag: cd133 status

value: posative


title: Fetal_pancreas_cell_19

description:
Single cell from human fetal pancreas
1000100502.A7


title: PreGM flox/flox 18 days post pIC rep3


title: S132 neg

value: negative


title: CLL_coculture with M2-10B4_1h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 1h


title: CLL_coculture with HS-5_24h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 24h


title: CLL_coculture with HS-5_8h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 8h


title: S125 neg


title: S115 pos


title: Fetal_pancreas_cell_14

description:
Single cell from human fetal pancreas
1000100302.H12


title: S115 neg


title: S123 pos


title: CLL_coculture with HS-5_4h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 4h


title: Fetal_pancreas_cell_15

description:
Single cell from human fetal pancreas
1000100501.H4


title: S123 neg


title: S125 pos


title: S126 neg


title: S122 neg


title: CLL_HS-5 conditioned medium_48h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, HS-5 conditioned medium, 48h


title: CLL_coculture with HS-5_24h_wash_DMEM_24h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 24h, washed, cultured in DMEM, 24h

value: HS-5 coculture/DMEM


title: Fetal_pancreas_cell_13

description:
Single cell from human fetal pancreas
1000100501.B7


title: Fetal_pancreas_cell_12

description:
Single cell from human fetal pancreas
1000100502.E12


title: S117 pos


title: S114 neg


title: Fetal_pancreas_cell_11

description:
Single cell from human fetal pancreas
1000100302.G7


title: CLL_HS-5 conditioned medium_24h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, HS-5 conditioned medium, 24h


title: CLL_coculture with HS-5_3h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 3h


title: Fetal_pancreas_cell_10

description:
Single cell from human fetal pancreas
1000100302.D3

source_name: 12wks_fetal pancreas cell_acinar

value: acinar


title: S126 pos


title: CLL_coculture with M2-10B4_30min_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with M2-10B4 cells, 30min


title: CLL_coculture with HS-5_6h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 6h


title: S117 neg


title: Fetal_pancreas_cell_9

description:
Single cell from human fetal pancreas
1000100502.D5

source_name: 12wks_fetal pancreas cell_ductal


title: CLL_HS-5 conditioned medium_8h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, HS-5 conditioned medium, 8h


title: CLL_HS-5 conditioned medium_4h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, HS-5 conditioned medium, 4h


title: S114 pos


title: S110 neg


title: S122 pos


title: S109 pos


title: Fetal_pancreas_cell_8

description:
Single cell from human fetal pancreas
1000100501.H9

source_name: 12wks_fetal pancreas cell_alpha

value: alpha


title: CLL_coculture with HS-5_2h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 2h


title: CLL_coculture with HS-5_1h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 1h


title: CLL_coculture with HS-5_30min_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 30min


title: Fetal_pancreas_cell_7

description:
Single cell from human fetal pancreas
1000100301.E2


title: CLL_DMEM_48h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 48h

value: DMEM


title: S109 neg

source_name: primary hcSCC tumors


title: Fetal_pancreas_cell_6

description:
Single cell from human fetal pancreas
1000100501.E12


title: Fetal_pancreas_cell_5

description:
Single cell from human fetal pancreas
1000100301.B9


title: Xylose 3

city: nanning

first: jun

last: huang

country: China

institute: guangxi sciences academy

data_processing:
Illumina Casava1.8 software used for basecalling.
clean data (clean reads) were obtained by removing reads containing adapter, reads containing ploy-N and low quality reads from raw data. Index of the reference genome was built using Bowtie v2.2.3 and paired-end clean reads were aligned to the reference genome using TopHat v2.0.12.
HTSeq v0.6.1 was used to count the reads numbers mapped to each gene. And then FPKM of each gene was calculated based on the length of the gene and reads count mapped to this gene.
Genome_build: Sequences from the JGI for Trire2 (http://genome.jgi-psf.org/Trire2/Trire2.home.html)
Supplementary_files_format_and_content: [.txt]  file includes FPKM values for each Sample

organism: Trichoderma reesei

source_name: Xylose, hypha

extract_protocol:
Fungus was collected, and RNA was harvested using Trizol reagent. NEBNext® Ultra™ DNA Library Prep Kit for Illumina® was used with 3 ug of total RNA for the construction of sequencing libraries.
RNA libraries were prepared for sequencing using standard Illumina protocols

tag: condition

value: anaerobic fermentation of xylose

tag: age

value: 4 days old

value: hypha


title: S110 pos


title: Xylose 2


title: Fetal_pancreas_cell_4

description:
Single cell from human fetal pancreas
1000100301.F1

source_name: 12wks_fetal pancreas cell_beta

value: Fetal pancreas


title: liver_control_rep3

city: Beijing

first: Ting

last: Liu

address: No.4 Road, Future Science and Technology Park, South Beiqijia, Changping District

institute: COFCO Nutrition and Health Research Institute

description: liver, stilled-water-fed high fat diet rat, 9 weeks

hyb_protocol: Hybridization was performed by KangChen Bio-tech, Shanghai, China, following NimbleGen's standard operating protocol.

scan_protocol: Scanning was performed by KangChen Bio-tech, Shanghai, China, following NimbleGen's standard operating protocol.

data_processing: Expression data were normalized through quantile normalization and the Robust Multichip Average (RMA) algorithm included in the NimbleScan software. The Probe level (*_norm_RMA.pair) files and Gene level (*_RMA.calls) files were generated after normalization.All gene level files were imported into Agilent GeneSpring GX software (version 11.5.1) for further analysis. Differentially expressed genes were identified through Fold Change filtering.

organism: Rattus norvegicus

label_protocol: Labeling was performed by KangChen Bio-tech, Shanghai, China, following NimbleGen's standard operating protocol.

growth_protocol: Liver tissue of rats were kept in liquid nitrogen.

extract_protocol: Total RNA was extracted using the RNeasy Mini kit (Qiagen Inc., Valencia, CA, USA) and the RNAprotect reagent (Qiagen) and DNA was removed by on-column DNase digestion with the RNase-Free DNase set (Qiagen). RNA quality and concentration was determined by analysis with an Agilent 2100 bioanalyzer at the Harvard-Partners Center for Genetics and Genomics (Harvard Medical School, Cambridge, MA USA).

value: Sprague Dawley

value: male

value: liver


title: liver_control_rep2

source_name: liver, stilled-water-fed high fat diet rat, 9 weeks


title: S108 pos


title: S108 neg


title: liver_8730 dark tea_rep1

description: liver, 8730-dark-tea-fed high fat diet rat, 9 weeks


title: liver_8730 dark tea_rep3

source_name: liver, 8730-dark-tea-fed high fat diet rat, 9 weeks


title: CLL_DMEM_6h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 6h

value: CD19-positive PBMCs from a CLL patient


title: CLL_DMEM_24h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 24h


title: S107 pos


title: CLL_DMEM_8h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 8h


title: liver_control_rep1


title: S106 neg


title: S107 neg


title: CLL_DMEM_24h_wash_DMEM_24h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 24h, washed, cultured in DMEM again, 24h

value: DMEM/DMEM


title: Xylose 1


title: S106 pos


title: Glucose 3

source_name: Glucose, hypha

value: anaerobic fermentation of glucose


title: Fetal_pancreas_cell_2

description:
Single cell from human fetal pancreas
1000100302.A1

value: beta


title: Glucose 2


title: Fetal_pancreas_cell_1

description:
Single cell from human fetal pancreas
1000100501.E3

source_name: 12wks_fetal pancreas cell_acinar


title: CLL_DMEM_3h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 3h


title: Fetal_pancreas_cell_3

description:
Single cell from human fetal pancreas
1000100301.G1

source_name: 12wks_fetal pancreas cell_ductal

value: ductal


title: liver_8730 dark tea_rep2


title: S104 pos

value: cutaneous squamous cell carcinoma

value: posative


title: CLL_DMEM_4h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 4h


title: Primary intestinal epithelial cells from wild type mice Run2_S8_WT_M2_Enterocyte.prog.early

status: Public on Jul 13 2019

city: Boston

first: Adam

last: Haber

state: Massachusetts

address: 665 Huntington Ave, HSPH Building 1, Room 305

institute: Harvard T. H. Chan School of Public Health

data_processing:
Read alignment to genome and transcriptome (bowtie, tophat)
Gene expression estimation (RSEM)
PCA (prcomp in R)
kNN-based graph clustering (R code)
Supplementary_files_format_and_content: TPM expression values for each gene (rows) in each cell (columns)

source_name: WT mouse intestinal epithelial cells

extract_protocol:
SMART-Seq2
10X Genomics Chromium Prep

value: WT


title: Primary intestinal epithelial cells from wild type mice Run2_S90_WT_M2_Enterocyte.prog.late


title: S104 neg

value: negative


title: Primary intestinal epithelial cells from wild type mice Run2_S85_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S91_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S89_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S86_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S94_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S97_WT_M1_TA


title: S100 pos


title: Primary intestinal epithelial cells from wild type mice Run2_S93_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S99_WT_M1_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run2_S88_WT_M2_Enterocyte


title: CLL_DMEM_2h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 2h

value: DMEM


title: CLL_DMEM_30min_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 30min


title: Primary intestinal epithelial cells from wild type mice Run2_S83_WT_M2_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run2_S98_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S82_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S80_WT_M2_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S7_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S84_WT_M2_Enterocyte.prog.early


title: S100 neg

source_name: primary hcSCC tumors


title: CLL_DMEM_1h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cultured in DMEM, 1h


title: Primary intestinal epithelial cells from wild type mice Run2_S79_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S92_WT_M2_TA


title: CLL_0h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, 0h


title: Glucose 1


title: CLL_coculture with HS-5_48h_rep1

description: replicate 1

source_name: CD19-positive PBMCs from a CLL patient, cocultured with HS-5 cells, 48h

value: HS-5 coculture


title: Primary intestinal epithelial cells from wild type mice Run2_S87_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S75_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S73_WT_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S65_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S6_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S72_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S77_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S74_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S71_WT_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S78_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S76_WT_M2_Paneth


title: Primary intestinal epithelial cells from wild type mice Run2_S66_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S64_WT_M2_Paneth


title: Primary intestinal epithelial cells from wild type mice Run2_S62_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S59_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S67_WT_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S70_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S56_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S68_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S54_WT_M2_Tuft


title: Primary intestinal epithelial cells from wild type mice Run2_S52_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S60_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S51_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S53_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S5_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S50_WT_M2_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S49_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S63_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S46_WT_M2_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run2_S61_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S44_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S42_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S39_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S38_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S40_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S41_WT_M2_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S43_WT_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S380_KO_M1_Goblet

source_name: ATG16L2 KO mouse intestinal epithelial cells


title: Primary intestinal epithelial cells from wild type mice Run2_S3_WT_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S379_KO_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S378_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S377_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S382_KO_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S58_WT_M2_Enteroendocrine


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S376_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S374_KO_M1_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S375_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S371_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S373_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S370_KO_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S36_WT_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S368_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S366_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S367_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S369_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S365_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S362_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S364_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S381_KO_M1_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S363_KO_M1_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S359_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S360_KO_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S4_WT_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S357_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S355_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S353_KO_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S351_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S356_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S358_KO_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S35_WT_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S348_KO_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S34_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S350_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S347_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S346_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S345_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S343_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S342_KO_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S33_WT_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S339_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S340_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S338_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S334_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S336_KO_M1_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S335_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S352_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S349_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S323_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S331_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S326_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S330_KO_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S322_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S327_KO_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S32_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S320_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S325_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S321_KO_M1_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S333_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S319_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S344_KO_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S31_WT_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S318_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S341_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S317_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S316_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S337_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S315_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S314_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S313_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S332_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S328_KO_M1_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S312_KO_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S30_WT_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S310_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S311_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S306_KO_M1_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S307_KO_M1_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S299_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S300_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S298_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S308_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S303_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S2_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S294_KO_M1_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S324_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S297_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S293_KO_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S29_WT_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S286_KO_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S28_WT_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S285_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S284_KO_M2_Paneth


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S301_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S309_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S283_KO_M2_Enteroendocrine


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S302_KO_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S296_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S281_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S282_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S304_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S280_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S295_KO_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S277_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S278_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S279_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S274_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S273_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S272_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S275_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S270_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S26_WT_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S269_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S268_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S265_KO_M2_Enteroendocrine


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S267_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S266_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S25_WT_M2_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S264_KO_M2_Enteroendocrine


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S259_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S258_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S257_KO_M2_Enteroendocrine


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S256_KO_M2_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S253_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S251_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S263_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S276_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S250_KO_M2_Enteroendocrine


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S249_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S271_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S247_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S245_KO_M2_Tuft


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S248_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S246_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S241_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S244_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S254_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S242_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S240_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S262_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S243_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S239_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S230_KO_M2_Tuft


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S232_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S228_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S231_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S227_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S237_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S234_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S229_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S233_KO_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S22_WT_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S236_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S224_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S225_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S226_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S223_KO_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S23_WT_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S238_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S220_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S222_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S221_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S235_KO_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S21_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S219_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S218_KO_M2_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S217_KO_M2_Enteroendocrine


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S214_KO_M2_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S209_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S20_WT_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S211_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S208_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S206_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S199_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S207_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S19_WT_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S202_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S200_KO_M2_Enterocyte.prog.late


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S198_KO_M2_Goblet


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S205_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S203_KO_M2_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S201_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S194_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S196_KO_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S190_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S193_KO_M2_Stem


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S197_KO_M2_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S18_WT_M2_Tuft


title: Primary intestinal epithelial cells from wild type mice Run2_S187_WT_M1_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run2_S185_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S184_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S183_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S182_WT_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S195_KO_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S186_WT_M1_TA


title: Primary intestinal epithelial cells from ATG16L2 KO mice Run2_S212_KO_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S179_WT_M1_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run2_S181_WT_M1_Tuft


title: Primary intestinal epithelial cells from wild type mice Run2_S177_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S176_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S175_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S168_WT_M1_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run2_S169_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S172_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S188_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S16_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S174_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S167_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S173_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S170_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S171_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S164_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S163_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S161_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S162_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S165_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S166_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S178_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S159_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S15_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S157_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S160_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S155_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S156_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S158_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S150_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S152_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S154_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S149_WT_M1_Paneth


title: Primary intestinal epithelial cells from wild type mice Run2_S151_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S148_WT_M1_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run2_S146_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S147_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S144_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S140_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S145_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S139_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S143_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S135_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S136_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S134_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S131_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S133_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S132_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S130_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S129_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S13_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S128_WT_M1_Paneth


title: Primary intestinal epithelial cells from wild type mice Run2_S127_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S126_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S123_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S125_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S121_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S122_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S120_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S119_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S142_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S137_WT_M1_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S118_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S112_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run2_S116_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S113_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run2_S12_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S111_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S110_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S10_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S109_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S124_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S11_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S105_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run2_S104_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S101_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run1_S94_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S98_WT_M2_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S107_WT_M1_Goblet


title: Primary intestinal epithelial cells from wild type mice Run2_S103_WT_M1_Stem


title: Primary intestinal epithelial cells from wild type mice Run1_S93_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S97_WT_M2_Stem


title: Primary intestinal epithelial cells from wild type mice Run1_S99_WT_M2_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S92_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S117_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run1_S89_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run1_S8_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run2_S106_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run1_S88_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S90_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S115_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S85_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run1_S84_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S83_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run1_S86_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run1_S82_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run1_S80_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run1_S7_WT_M1_Paneth


title: Primary intestinal epithelial cells from wild type mice Run1_S81_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run2_S102_WT_M1_Goblet


title: Primary intestinal epithelial cells from wild type mice Run1_S79_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run1_S91_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run1_S75_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run1_S77_WT_M1_Enterocyte.prog.late


title: Primary intestinal epithelial cells from wild type mice Run1_S73_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S67_WT_M1_Goblet


title: Primary intestinal epithelial cells from wild type mice Run1_S71_WT_M1_Goblet


title: Primary intestinal epithelial cells from wild type mice Run1_S74_WT_M1_Paneth


title: Primary intestinal epithelial cells from wild type mice Run1_S72_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S69_WT_M1_Goblet


title: Primary intestinal epithelial cells from wild type mice Run1_S66_WT_M1_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run1_S70_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run1_S6_WT_M1_Goblet


title: Primary intestinal epithelial cells from wild type mice Run1_S76_WT_M1_Enteroendocrine


title: Primary intestinal epithelial cells from wild type mice Run1_S63_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run1_S64_WT_M1_Enterocyte


title: Primary intestinal epithelial cells from wild type mice Run1_S5_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S68_WT_M1_Enterocyte.prog.early


title: Primary intestinal epithelial cells from wild type mice Run1_S57_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S56_WT_M1_Goblet


title: Primary intestinal epithelial cells from wild type mice Run1_S58_WT_M1_TA


title: Primary intestinal epithelial cells from wild type mice Run1_S60_WT_M1_TA