title: Single Sert+ neuron 897

description:
G8_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 894

status: Public on Aug 01 2019

type: SRA

city: Stanford

first: Alina

last: Isakova

state: CA

address: 318 Campus drive

department: Bioengineering

country: USA

institute: Stanford University

description:
G7_SER50
Adult_DR_GEO_counts_cpm.txt

library_source: transcriptomic

data_processing:
Sequences from the NextSeq were de-multiplexed using bcl2fastq version 2.19.0.316. Reads were aligned to the mm10 genome using STAR version 2.6.1a (Dobin et al., 2013). Gene counts were produced using HTseq version 0.11.2 (Anders et al., 2015) with default parameters, except ‘stranded’ was set to ‘false’, and ‘mode’ was set to ‘intersection-nonempty’. Genes located on Y chromosome were removed from the count table to exclude sex bias.
Genome_build: GRCm38
Supplementary_files_format_and_content: tab-delimited text files include CPM values for all Samples passing quality threshhold

molecule: polyA RNA

organism: Mus musculus

source_name: Sert+ neurons

extract_protocol:
Lysis plates were prepared by dispensing 4 μl lysis buffer as described in (Tabula Muris et al., 2018). After dissociation, single tdTomato+ cells were sorted in 96-well plates using SH800S (Sony). Immediately after sorting, plates were sealed with a pre-labelled aluminum seal, centrifuged, and flash frozen on dry ice. cDNA synthesis and library preparation were performed using the Smart-seq2 protocol (Picelli et al., 2014). Wells of each library plate were pooled using a Mosquito liquid handler (TTP Labtech). Pooling was followed by two purifications using 0.7x AMPure beads (Fisher, A63881). Library quality was assessed using capillary electrophoresis on a Fragment Analyzer (AATI), and libraries were quantified by qPCR (Kapa Biosystems, KK4923) on a CFX96 Touch Real-Time PCR Detection System (Bio-Rad). Libraries were sequenced on the NextSeq 500 Sequencing System (Illumina) using 2 × 75-bp paired-end reads and 2 × 8-bp index reads.
Smrt-seq2

tag: strain

tag: tissue

value: Sert+ neurons

tag: age

value: 40–45 days

tag: brain region

value: All DR

tag: genotype

value: Sert-tdTomato-Cre cross with Ai14


title: Single Sert+ neuron 899

description:
G9_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 893

description:
G6_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 912

description:
H13_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 909

description:
H12_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 902

description:
H1_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 901

description:
H1_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 892

description:
G6_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 891

description:
G6_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 890

description:
G5_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 889

description:
G5_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 887

description:
G4_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 888

description:
G4_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 886

description:
G4_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 885

description:
G3_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 883

description:
G24_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 884

description:
G3_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 881

description:
G24_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 882

description:
G24_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 880

description:
G23_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 878

description:
G22_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 876

description:
G22_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 869

description:
G2_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 871

description:
G20_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 873

description:
G20_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 875

description:
G21_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 879

description:
G23_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 877

description:
G22_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 874

description:
G21_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 870

description:
G2_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 872

description:
G20_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 867

description:
G19_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 868

description:
G2_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 865

description:
G18_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 864

description:
G18_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 862

description:
G17_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 863

description:
G18_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 866

description:
G19_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 861

description:
G17_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 860

description:
G16_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 859

description:
G16_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 858

description:
G16_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 857

description:
G15_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 856

description:
G15_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 853

description:
G14_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 854

description:
G14_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 852

description:
G13_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 851

description:
G13_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 849

description:
G12_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 855

description:
G14_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 850

description:
G12_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 846

description:
G11_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 844

description:
G10_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 845

description:
G10_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 847

description:
G11_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 843

description:
G10_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 839

description:
F9_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 838

description:
F8_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 837

description:
F8_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 842

description:
G1_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 841

description:
G1_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 834

description:
F7_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 836

description:
F8_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 832

description:
F6_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 835

description:
F7_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 833

description:
F6_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 831

description:
F6_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 830

description:
F5_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 828

description:
F4_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 826

description:
F4_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 825

description:
F3_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 823

description:
F24_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 848

description:
G12_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 822

description:
F24_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 819

description:
F23_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 824

description:
F3_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 820

description:
F23_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 818

description:
F22_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 840

description:
F9_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 815

description:
F21_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 814

description:
F21_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 817

description:
F22_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 811

description:
F20_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 816

description:
F22_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 812

description:
F20_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 810

description:
F2_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 809

description:
F2_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 806

description:
F19_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 829

description:
F5_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 808

description:
F2_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 805

description:
F18_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 804

description:
F18_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 827

description:
F4_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 803

description:
F18_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 807

description:
F19_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 800

description:
F16_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 799

description:
F16_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 801

description:
F17_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 802

description:
F17_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 821

description:
F24_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 798

description:
F16_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 797

description:
F15_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 793

description:
F14_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 796

description:
F15_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 813

description:
F20_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 792

description:
F13_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 791

description:
F13_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 794

description:
F14_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 795

description:
F14_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 789

description:
F12_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 790

description:
F12_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 786

description:
F11_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 779

description:
E9_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 780

description:
E9_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 784

description:
F10_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 782

description:
F1_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 785

description:
F10_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 775

description:
E7_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 783

description:
F10_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 787

description:
F11_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 777

description:
E8_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 781

description:
F1_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 774

description:
E7_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 773

description:
E6_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 776

description:
E8_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 770

description:
E5_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 778

description:
E8_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 772

description:
E6_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 768

description:
E4_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 767

description:
E4_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 766

description:
E4_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 788

description:
F12_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 762

description:
E24_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 758

description:
E22_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 760

description:
E23_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 759

description:
E23_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 763

description:
E24_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 764

description:
E3_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 765

description:
E3_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 756

description:
E22_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 757

description:
E22_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 771

description:
E6_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 749

description:
E2_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 751

description:
E20_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 750

description:
E2_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 769

description:
E5_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 752

description:
E20_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 754

description:
E21_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 747

description:
E19_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 748

description:
E2_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 746

description:
E19_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 753

description:
E20_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 745

description:
E18_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 761

description:
E24_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 739

description:
E16_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 744

description:
E18_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 742

description:
E17_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 740

description:
E16_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 738

description:
E16_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 741

description:
E17_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 743

description:
E18_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 755

description:
E21_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 737

description:
E15_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 736

description:
E15_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 734

description:
E14_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 731

description:
E13_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 735

description:
E14_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 732

description:
E13_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 728

description:
E12_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 730

description:
E12_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 733

description:
E14_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 729

description:
E12_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 726

description:
E11_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 724

description:
E10_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 721

description:
E1_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 722

description:
E1_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 723

description:
E10_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 720

description:
D9_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 727

description:
E11_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 719

description:
D9_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 717

description:
D8_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 716

description:
D8_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 713

description:
D6_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 714

description:
D7_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 711

description:
D6_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 709

description:
D5_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 708

description:
D4_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 710

description:
D5_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 707

description:
D4_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 704

description:
D3_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 706

description:
D4_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 705

description:
D3_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 702

description:
D24_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 725

description:
E10_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 701

description:
D24_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 700

description:
D23_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 698

description:
D22_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 718

description:
D8_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 695

description:
D21_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 696

description:
D22_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 699

description:
D23_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 691

description:
D20_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 694

description:
D21_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 692

description:
D20_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 690

description:
D2_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 688

description:
D2_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 715

description:
D7_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 712

description:
D6_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 689

description:
D2_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 686

description:
D19_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 685

description:
D18_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 684

description:
D18_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 683

description:
D18_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 703

description:
D24_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 682

description:
D17_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 681

description:
D17_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 680

description:
D16_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 679

description:
D16_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 677

description:
D15_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 697

description:
D22_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 676

description:
D15_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 693

description:
D20_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 674

description:
D14_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 673

description:
D14_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 675

description:
D14_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 672

description:
D13_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 668

description:
D12_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 669

description:
D12_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 670

description:
D12_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 667

description:
D11_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 665

description:
D10_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 666

description:
D11_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 664

description:
D10_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 687

description:
D19_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 663

description:
D10_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 662

description:
D1_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 661

description:
D1_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 660

description:
C9_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 659

description:
C9_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 657

description:
C8_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 658

description:
C8_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 678

description:
D16_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 654

description:
C7_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 652

description:
C6_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 655

description:
C7_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 656

description:
C8_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 648

description:
C4_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 650

description:
C5_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 671

description:
D13_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 649

description:
C5_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 651

description:
C6_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 653

description:
C6_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 644

description:
C3_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 645

description:
C3_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 646

description:
C4_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 640

description:
C23_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 641

description:
C24_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 643

description:
C24_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 642

description:
C24_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 638

description:
C22_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 636

description:
C22_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 637

description:
C22_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 635

description:
C21_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 633

description:
C20_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 634

description:
C21_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 631

description:
C20_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 632

description:
C20_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 629

description:
C2_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 628

description:
C2_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 630

description:
C2_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 625

description:
C18_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 647

description:
C4_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 624

description:
C18_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 623

description:
C18_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 620

description:
C16_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 621

description:
C17_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 622

description:
C17_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 618

description:
C16_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 617

description:
C15_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 616

description:
C15_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 619

description:
C16_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 615

description:
C14_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 639

description:
C23_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 612

description:
C13_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 614

description:
C14_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 610

description:
C12_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 605

description:
C10_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 613

description:
C14_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 608

description:
C12_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 609

description:
C12_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 611

description:
C13_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 627

description:
C19_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 603

description:
C10_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 602

description:
C1_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 604

description:
C10_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 601

description:
C1_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 626

description:
C19_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 600

description:
B9_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 598

description:
B8_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 599

description:
B9_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 607

description:
C11_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 597

description:
B8_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 596

description:
B8_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 595

description:
B7_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 594

description:
B7_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 592

description:
B6_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 591

description:
B6_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 593

description:
B6_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 590

description:
B5_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 606

description:
C11_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 587

description:
B4_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 586

description:
B4_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 584

description:
B3_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 583

description:
B24_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 582

description:
B24_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 581

description:
B24_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 577

description:
B22_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 580

description:
B23_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 579

description:
B23_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 578

description:
B22_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 573

description:
B20_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 575

description:
B21_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 571

description:
B20_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 574

description:
B21_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 572

description:
B20_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 570

description:
B2_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 568

description:
B2_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 567

description:
B19_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 569

description:
B2_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 588

description:
B4_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 566

description:
B19_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 561

description:
B17_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 562

description:
B17_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 564

description:
B18_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 565

description:
B18_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 560

description:
B16_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 589

description:
B5_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 585

description:
B3_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 559

description:
B16_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 563

description:
B18_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 558

description:
B16_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 556

description:
B15_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 557

description:
B15_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 576

description:
B22_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 555

description:
B14_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 554

description:
B14_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 552

description:
B13_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 551

description:
B13_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 550

description:
B12_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 549

description:
B12_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 553

description:
B14_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 546

description:
B11_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 547

description:
B11_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 548

description:
B12_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 540

description:
A9_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 544

description:
B10_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 541

description:
B1_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 545

description:
B10_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 543

description:
B10_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 542

description:
B1_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 537

description:
A8_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 539

description:
A9_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 536

description:
A8_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 538

description:
A8_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 529

description:
A5_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 533

description:
A6_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 532

description:
A6_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 534

description:
A7_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 535

description:
A7_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 530

description:
A5_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 528

description:
A4_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 531

description:
A6_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 527

description:
A4_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 525

description:
A3_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 523

description:
A24_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 524

description:
A3_SER50_
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 526

description:
A4_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 521

description:
A24_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 520

description:
A23_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 522

description:
A24_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 519

description:
A23_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 517

description:
A22_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 518

description:
A22_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 516

description:
A22_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 515

description:
A21_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 511

description:
A20_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 513

description:
A20_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 512

description:
A20_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 509

description:
A2_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 510

description:
A2_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 508

description:
A2_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 506

description:
A19_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 504

description:
A18_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 507

description:
A19_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 502

description:
A17_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 503

description:
A18_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 500

description:
A16_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 501

description:
A17_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 499

description:
A16_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 498

description:
A16_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 496

description:
A15_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 495

description:
A14_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 491

description:
A13_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 492

description:
A13_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 514

description:
A21_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 494

description:
A14_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 488

description:
A12_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 487

description:
A11_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 485

description:
A10_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 486

description:
A11_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 505

description:
A18_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 483

description:
A10_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 482

description:
A1_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 484

description:
A10_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 477

description:
P6_SER13
Adult_DR_GEO_counts_cpm.txt

value: Principal DR


title: Single Sert+ neuron 478

description:
P7_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 481

description:
A1_SER50
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 497

description:
A15_SER51
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 479

description:
P8_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 473

description:
P24_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 474

description:
P3_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 480

description:
P9_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 471

description:
P22_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 493

description:
A14_SER48
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 470

description:
P21_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 475

description:
P4_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 469

description:
P20_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 472

description:
P23_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 490

description:
A12_SER55
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 489

description:
A12_SER52
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 468

description:
P2_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 467

description:
P19_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 466

description:
P18_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 465

description:
P17_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 459

description:
P11_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 464

description:
P16_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 462

description:
P14_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 463

description:
P15_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 458

description:
P10_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 476

description:
P5_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 461

description:
P13_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 457

description:
P1_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 456

description:
O9_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 452

description:
O5_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 455

description:
O8_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 453

description:
O6_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 451

description:
O4_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 447

description:
O22_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 450

description:
O3_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 449

description:
O24_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 444

description:
O2_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 446

description:
O21_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 445

description:
O20_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 440

description:
O16_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 442

description:
O18_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 439

description:
O15_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 441

description:
O17_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 448

description:
O23_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 438

description:
O14_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 460

description:
P12_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 437

description:
O13_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 436

description:
O12_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 454

description:
O7_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 432

description:
N9_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 435

description:
O11_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 433

description:
O1_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 431

description:
N8_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 430

description:
N7_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 443

description:
O19_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 426

description:
N3_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 427

description:
N4_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 429

description:
N6_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 425

description:
N24_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 423

description:
N22_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 424

description:
N23_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 420

description:
N2_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 422

description:
N21_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 418

description:
N18_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 416

description:
N16_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 421

description:
N20_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 415

description:
N15_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 414

description:
N14_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 417

description:
N17_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 411

description:
N11_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 412

description:
N12_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 410

description:
N10_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 419

description:
N19_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 413

description:
N13_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 408

description:
M9_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 434

description:
O10_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 407

description:
M8_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 428

description:
N5_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 409

description:
N1_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 406

description:
M7_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 405

description:
M6_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 402

description:
M3_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 404

description:
M5_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 403

description:
M4_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 399

description:
M22_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 397

description:
M20_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 395

description:
M19_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 400

description:
M23_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 398

description:
M21_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 394

description:
M18_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 392

description:
M16_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 388

description:
M12_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 389

description:
M13_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 391

description:
M15_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 387

description:
M11_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 386

description:
M10_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 385

description:
M1_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 384

description:
L9_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 383

description:
L8_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 381

description:
L6_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 382

description:
L7_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 401

description:
M24_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 379

description:
L4_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 378

description:
L3_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 380

description:
L5_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 377

description:
L24_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 375

description:
L22_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 376

description:
L23_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 374

description:
L21_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 373

description:
L20_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 396

description:
M2_SER13_
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 393

description:
M17_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 390

description:
M14_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 368

description:
L16_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 367

description:
L15_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 370

description:
L18_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 366

description:
L14_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 365

description:
L13_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 363

description:
L11_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 362

description:
L10_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 360

description:
K9_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 358

description:
K7_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 361

description:
L1_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 355

description:
K4_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 356

description:
K5_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 357

description:
K6_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 354

description:
K3_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 353

description:
K24_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 372

description:
L2_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 347

description:
K19_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 348

description:
K2_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 350

description:
K21_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 349

description:
K20_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 345

description:
K17_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 352

description:
K23_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 351

description:
K22_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 344

description:
K16_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 369

description:
L17_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 371

description:
L19_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 364

description:
L12_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 341

description:
K13_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 342

description:
K14_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 359

description:
K8_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 340

description:
K12_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 339

description:
K11_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 343

description:
K15_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 338

description:
K10_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 335

description:
J8_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 336

description:
J9_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 334

description:
J7_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 333

description:
J6_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 330

description:
J3_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 331

description:
J4_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 332

description:
J5_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 329

description:
J24_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 328

description:
J23_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 346

description:
K18_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 326

description:
J21_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 323

description:
J19_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 327

description:
J22_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 321

description:
J17_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 324

description:
J2_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 322

description:
J18_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 319

description:
J15_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 320

description:
J16_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 337

description:
K1_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 316

description:
J12_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 318

description:
J14_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 317

description:
J13_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 314

description:
J10_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 312

description:
I9_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 311

description:
I8_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 310

description:
I7_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 315

description:
J11_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 313

description:
J1_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 307

description:
I4_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 309

description:
I6_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 304

description:
I23_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 302

description:
I21_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 306

description:
I3_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 303

description:
I22_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 301

description:
I20_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 300

description:
I2_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 299

description:
I19_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 325

description:
J20_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 297

description:
I17_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 295

description:
I15_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 296

description:
I16_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 298

description:
I18_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 293

description:
I13_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 292

description:
I12_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 290

description:
I10_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 291

description:
I11_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 289

description:
I1_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 285

description:
H7_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 308

description:
I5_SER12
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 288

description:
H9_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 287

description:
H9_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 286

description:
H8_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 282

description:
H5_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 284

description:
H7_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 281

description:
H5_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 283

description:
H6_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 280

description:
H4_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 305

description:
I24_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 276

description:
H23_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 277

description:
H24_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 273

description:
H21_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 275

description:
H23_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 274

description:
H22_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 279

description:
H3_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 271

description:
H20_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 294

description:
I14_SER13
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 270

description:
H2_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 272

description:
H21_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 269

description:
H19_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 267

description:
H18_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 266

description:
H17_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 268

description:
H19_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 264

description:
H16_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 263

description:
H15_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 265

description:
H17_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 259

description:
H13_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 260

description:
H13_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 258

description:
H12_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 262

description:
H15_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 257

description:
H11_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 254

description:
H1_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 253

description:
H1_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 252

description:
G9_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 250

description:
G8_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 249

description:
G7_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 251

description:
G9_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 278

description:
H3_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 247

description:
G6_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 248

description:
G7_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 245

description:
G5_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 246

description:
G5_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 244

description:
G4_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 243

description:
G3_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 241

description:
G24_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 242

description:
G3_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 261

description:
H14_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 239

description:
G23_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 237

description:
G21_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 240

description:
G23_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 236

description:
G21_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 233

description:
G19_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 256

description:
H11_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 234

description:
G2_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 230

description:
G17_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 238

description:
G22_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 232

description:
G19_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 255

description:
H10_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 235

description:
G20_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 231

description:
G18_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 228

description:
G16_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 229

description:
G17_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 224

description:
G13_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 220

description:
G11_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 222

description:
G12_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 221

description:
G11_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 218

description:
G1_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 225

description:
G14_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 223

description:
G13_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 227

description:
G15_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 217

description:
G1_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 226

description:
G15_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 215

description:
F9_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 214

description:
F8_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 213

description:
F7_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 211

description:
F6_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 216

description:
F9_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 209

description:
F5_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 206

description:
F3_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 208

description:
F4_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 212

description:
F7_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 207

description:
F3_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 203

description:
F23_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 210

description:
F5_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 202

description:
F22_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 219

description:
G10_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 204

description:
F23_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 201

description:
F21_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 205

description:
F24_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 199

description:
F20_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 198

description:
F2_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 197

description:
F19_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 195

description:
F18_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 194

description:
F17_SER39
Adult_DR_GEO_counts_cpm.txt


title: Form_18h_rep4

type: RNA

city: Calgary

first: Robert

last: Newton

state: Alberta

address: 3330 Hospital Dr NW

department: Snyder Institute for Chronic Diseases

country: Canada

institute: University of Calgary

hyb_protocol: standard Affymetrix procedures. GeneChip PrimeView Human Gene Expression Array were used.

scan_protocol: GeneChips were scanned using GeneChip Scanner 3000 7G

data_processing: The data were processed (RMA normalization) using Affymetrix TAC v4.0.

label: biotin

molecule: total RNA

organism: Homo sapiens

source_name: BEAS-2B, formoterol, 18h

label_protocol: standard Affymetrix procedures

growth_protocol: Human bronchial epithelial (BEAS-2B) cells were cultured in Dulbecco's modified Eagle's/Ham's F12 medium (DMEM/F12) supplemented with 14 mM NaHCO3, 2 mM L-glutamine and 10% fetal calf serum. Cells were cultured at 37°C in 5% CO2/95% air and were incubated in serum-free medium overnight prior to experiments.

extract_protocol: Total RNA was extracted using RNeasy mini kit (Qiagen) according to the manufacturer's protocol and then stored at -80 °C

treatment_protocol: BEAS-2B cells were either not treated (NS) or treated with budesonide (Bud; 100 nM), formoterol (Form; 10 nM) or both combined (Bud_Form)) for 1, 2, 6 and 18 h.

tag: cell line

tag: treatment

value: Formoterol

tag: time point


title: Bud_18h_rep4

source_name: BEAS-2B, budesonide, 18h

value: Budesonide


title: Form_18h_rep3


title: Form_18h_rep1


title: Form_18h_rep2


title: Bud_Form_18h_rep1

source_name: BEAS-2B, budesonide + formoterol, 18h

value: Budesonide + Formoterol


title: Bud_Form_18h_rep3


title: Bud_Form_18h_rep2


title: Bud_18h_rep3


title: Single Sert+ neuron 192

description:
F16_SER40
Adult_DR_GEO_counts_cpm.txt


title: Bud_Form_18h_rep4


title: Single Sert+ neuron 190

description:
F15_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 200

description:
F21_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 191

description:
F15_SER39
Adult_DR_GEO_counts_cpm.txt


title: NS_18h_rep4

source_name: BEAS-2B, control, 18h

value: Control (non stimulated)


title: Single Sert+ neuron 196

description:
F19_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 193

description:
F17_SER25
Adult_DR_GEO_counts_cpm.txt


title: Bud_18h_rep2


title: Bud_18h_rep1


title: Single Sert+ neuron 188

description:
F13_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 187

description:
F13_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 185

description:
F11_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 184

description:
F11_SER25
Adult_DR_GEO_counts_cpm.txt


title: Bud_Form_6h_rep3

source_name: BEAS-2B, budesonide + formoterol, 6h


title: NS_18h_rep3


title: NS_18h_rep2


title: Bud_Form_6h_rep2


title: Single Sert+ neuron 183

description:
F10_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 182

description:
F1_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 181

description:
F1_SER25
Adult_DR_GEO_counts_cpm.txt


title: Bud_Form_6h_rep4


title: Bud_Form_6h_rep1


title: Single Sert+ neuron 180

description:
E9_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 179

description:
E9_SER25
Adult_DR_GEO_counts_cpm.txt


title: NS_18h_rep1


title: Single Sert+ neuron 178

description:
E8_SER40
Adult_DR_GEO_counts_cpm.txt


title: Form_6h_rep3

source_name: BEAS-2B, formoterol, 6h


title: Single Sert+ neuron 177

description:
E7_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 175

description:
E6_SER40
Adult_DR_GEO_counts_cpm.txt


title: Form_6h_rep1


title: Single Sert+ neuron 174

description:
E5_SER39
Adult_DR_GEO_counts_cpm.txt


title: Bud_6h_rep3

source_name: BEAS-2B, budesonide, 6h


title: Bud_6h_rep2


title: Single Sert+ neuron 172

description:
E4_SER40
Adult_DR_GEO_counts_cpm.txt


title: Bud_6h_rep4


title: Single Sert+ neuron 173

description:
E5_SER25
Adult_DR_GEO_counts_cpm.txt


title: Bud_6h_rep1


title: Single Sert+ neuron 171

description:
E3_SER39
Adult_DR_GEO_counts_cpm.txt


title: Form_6h_rep4


title: Single Sert+ neuron 170

description:
E3_SER25
Adult_DR_GEO_counts_cpm.txt


title: NS_6h_rep4

source_name: BEAS-2B, control, 6h


title: NS_6h_rep2


title: Form_6h_rep2


title: NS_6h_rep3


title: Single Sert+ neuron 169

description:
E24_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 176

description:
E7_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 167

description:
E23_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 186

description:
F12_SER40
Adult_DR_GEO_counts_cpm.txt


title: Bud_Form_2h_rep3

source_name: BEAS-2B, budesonide + formoterol, 2h


title: Bud_Form_2h_rep1


title: NS_6h_rep1


title: Single Sert+ neuron 166

description:
E22_SER40
Adult_DR_GEO_counts_cpm.txt


title: Form_2h_rep4

source_name: BEAS-2B, formoterol, 2h


title: Bud_Form_2h_rep2


title: Form_2h_rep3


title: Form_2h_rep2


title: Form_2h_rep1


title: Bud_Form_2h_rep4


title: Single Sert+ neuron 164

description:
E21_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 165

description:
E21_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 162

description:
E2_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 160

description:
E19_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 158

description:
E17_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 161

description:
E19_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 163

description:
E20_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 159

description:
E18_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 157

description:
E17_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 155

description:
E15_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 154

description:
E15_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 156

description:
E16_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 153

description:
E14_SER40
Adult_DR_GEO_counts_cpm.txt


title: Bud_2h_rep4

source_name: BEAS-2B, budesonide, 2h


title: Single Sert+ neuron 152

description:
E13_SER39
Adult_DR_GEO_counts_cpm.txt


title: Bud_2h_rep3


title: Bud_2h_rep2


title: Bud_Form_1h_rep4

source_name: BEAS-2B, budesonide + formoterol, 1h


title: Bud_2h_rep1


title: NS_2h_rep3

source_name: BEAS-2B, control, 2h


title: NS_2h_rep4


title: Bud_Form_1h_rep2


title: Single Sert+ neuron 150

description:
E12_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 149

description:
E11_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 148

description:
E11_SER25
Adult_DR_GEO_counts_cpm.txt


title: NS_2h_rep2


title: Single Sert+ neuron 151

description:
E13_SER25
Adult_DR_GEO_counts_cpm.txt


title: NS_2h_rep1


title: Form_1h_rep3

source_name: BEAS-2B, formoterol, 1h


title: Bud_Form_1h_rep1


title: Form_1h_rep2


title: Single Sert+ neuron 147

description:
E10_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 189

description:
F14_SER40
Adult_DR_GEO_counts_cpm.txt


title: Bud_Form_1h_rep3


title: Single Sert+ neuron 146

description:
E1_SER39
Adult_DR_GEO_counts_cpm.txt


title: Form_1h_rep1


title: Form_1h_rep4


title: Single Sert+ neuron 145

description:
E1_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 144

description:
D9_SER39
Adult_DR_GEO_counts_cpm.txt


title: Bud_1h_rep3

source_name: BEAS-2B, budesonide, 1h


title: Bud_1h_rep4


title: Single Sert+ neuron 143

description:
D9_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 142

description:
D8_SER40
Adult_DR_GEO_counts_cpm.txt


title: Bud_1h_rep2


title: M. tuberculosis exposed to quinazoline-11626252 at 30x MIC, replicate 1

city: Bern

first: Andrej

last: Benjak

address: Murtenstrasse 24-28

department: Department for BioMedical Research

country: Switzerland

institute: University of Bern

data_processing:
Reads were adapter- and quality-trimmed with Trimmomatic v0.33 and mapped onto the M. tuberculosis H37Rv reference genome (RefSeq NC_000962.3) using Bowtie2 v2.2.5.
Counting reads over features was done with featureCounts from the Subread package v1.4.6.
DESeq2 was used to infer differentially expressed genes.
Note that the control samples are available under accession GSM3111057 and GSM3111058.
Genome_build: NC_000962.3

organism: Mycobacterium tuberculosis

source_name: cell culture

growth_protocol: Wild-type H37Rv cultures were grown to mid-log phase at 37°C.

extract_protocol:
Cells were harvested by centrifugation and pellets were stored with 1 ml of TRIzol reagent (Thermo Fisher Scientific) at -80oC until further processed. Cells were lysed by bead-beating and total RNA was extracted by phenol-chloroform with DNAse treatment (RQ1 RNase–free DNase, Promega).
Library preparation was done using the Ribo-zero rRNA removal kit (Illumina) for Gram-positive bacteria.

treatment_protocol: Cells were exposed to quinazoline-11626252 compound for 4 h at 37°C.


title: Single Sert+ neuron 141

description:
D7_SER39
Adult_DR_GEO_counts_cpm.txt

source_name: Sert+ neurons


title: M. tuberculosis exposed to quinazoline-11626252 at 30x MIC, replicate 2


title: M. tuberculosis exposed to quinazoline-11626252 at 10x MIC, replicate 2


title: Single Sert+ neuron 138

description:
D5_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 136

description:
D4_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 137

description:
D5_SER25
Adult_DR_GEO_counts_cpm.txt


title: M. tuberculosis exposed to quinazoline-11626252 at 10x MIC, replicate 1


title: NS_1h_rep4

source_name: BEAS-2B, control, 1h


title: NS_1h_rep2


title: NS_1h_rep1


title: NS_1h_rep3


title: Bud_1h_rep1


title: Single Sert+ neuron 132

description:
D23_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 134

description:
D3_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 135

description:
D3_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 131

description:
D23_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 140

description:
D7_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 139

description:
D6_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 130

description:
D22_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 128

description:
D21_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 127

description:
D20_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 126

description:
D2_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 133

description:
D24_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 125

description:
D19_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 124

description:
D19_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 129

description:
D21_SER39
Adult_DR_GEO_counts_cpm.txt


title: CerebralWhiteMatter_11

city: Ribeirão Preto

first: Carlos

middle: Alberto

last: Scrideli

state: São Paulo

address: Avenida Bandeirantes 3900

department: Pediatrics

country: Brazil

institute: Ribeirao Preto Medicine School - University of Sao Paulo

hyb_protocol: The labeled RNA was purified (MicroBioSpin 6, Bio-Rad, 732-6221), hybridized (overnight for 20 hours at 55°C and 20 rpm) and washed (Agilent, 5188-5327) before scanning.

scan_protocol: Microarray slides were scanned at 535 nm with 5 μm/pixel resolution using a DNA Microarray Scanner with SureScan High-Resolution Technology (Agilent Technologies) and the fluorescent intensities were determined by the Feature Extraction Software Version 11.5 (Agilent Technologies), to obtain Processed Signals (resulting from all intra-array pre-processing, including background corrections)  corresponding to the transcript levels.

data_processing:
The spot images were processed with Feature Extraction Software v10.7.3.1 (Agilent Technologies). Each miRNA microarray was analyzed with respect to signal intensity, background signal, as well as internal control blade and spike in controls. A box-plot was  generated in order to determine the distribution of signals  from each spot on each microarray as well as sample integrity and quality.
An empirical Bayesian approach was used to determine differential expression and the false discovery rate (FDR) was used to control the false-positive rate. Normalization was performed by the 75% quartile method.

source_name: Cerebral white matter 12

label_protocol: The microRNA library was constructed using 100 ng of total RNA and investigated with the Agilent  Human microRNA Microarray Kit (v3)” (G4470C, Agilent Technologies, Santa Clara, CA, USA) to determine the expression profile of microRNAs according to manufacturer’s instructions. This array contains 866 human and 89 human viral microRNA sequences. Each miRNA species is printed 20 times with replicate probes on the array.

extract_protocol: Fresh surgical tissues were immediately snap-frozen in liquid nitrogen, stored at −80 °C and microdissected prior to RNA extraction and only specimen with at least 80% of tumor cells were included in the study. Total cellular RNA was extracted using TRIzol LS Reagent (Invitrogen, Carlsbad, CA, USA) according to the  anufacturer’s instructions. The RNA was reverse transcribed to single-stranded cDNA using the High Capacity Kit (Applied Biosystems, Foster  City, CA, USA).

value: Non-neoplastic Cerebral White Matter


title: CerebralWhiteMatter_7

source_name: Cerebral white matter 8


title: CerebralWhiteMatter_8

source_name: Cerebral white matter 9


title: CerebralWhiteMatter_9

source_name: Cerebral white matter 10


title: CerebralWhiteMatter_5

source_name: Cerebral white matter 6


title: CerebralWhiteMatter_3

source_name: Cerebral white matter 4


title: CerebralWhiteMatter_6

source_name: Cerebral white matter 7


title: CerebralWhiteMatter_10

source_name: Cerebral white matter 11


title: CerebralWhiteMatter_4

source_name: Cerebral white matter 5


title: CerebralWhiteMatter_12

source_name: Cerebral white matter 13


title: Single Sert+ neuron 121

description:
D17_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 120

description:
D16_SER40
Adult_DR_GEO_counts_cpm.txt


title: CerebralWhiteMatter_1

source_name: Cerebral white matter 2


title: Single Sert+ neuron 119

description:
D15_SER39
Adult_DR_GEO_counts_cpm.txt


title: PilocyticAstrocytoma_16_tumor

source_name: Cerebral white matter 1

value: Tumor

tag: gender

value: Male

tag: age at diagnosis

tag: chemotherapy

value: No

tag: neurofibromatosis type 1 (nf1)

tag: follow up (month)

tag: kiaaa159-braf fusion

value: Positive

tag: relapse

value: Yes

tag: vital status

value: Alive


title: Single Sert+ neuron 118

description:
D15_SER25
Adult_DR_GEO_counts_cpm.txt


title: PilocyticAstrocytoma_12_tumor

source_name: Pilocytic astrocytoma, tumor, patient12

value: ND


title: CerebralWhiteMatter_2

source_name: Cerebral white matter 3


title: Single Sert+ neuron 123

description:
D18_SER40
Adult_DR_GEO_counts_cpm.txt

value: Sert+ neurons


title: Single Sert+ neuron 122

description:
D17_SER39
Adult_DR_GEO_counts_cpm.txt

value: 40–45 days


title: Single Sert+ neuron 117

description:
D14_SER40
Adult_DR_GEO_counts_cpm.txt


title: PilocyticAstrocytoma_14_tumor

source_name: Pilocytic astrocytoma, tumor, patient14

value: Death


title: PilocyticAstrocytoma_11_tumor

source_name: Pilocytic astrocytoma, tumor, patient11


title: Single Sert+ neuron 115

description:
D13_SER25
Adult_DR_GEO_counts_cpm.txt

source_name: Sert+ neurons

value: Sert-tdTomato-Cre cross with Ai14


title: PilocyticAstrocytoma_10_tumor

source_name: Pilocytic astrocytoma, tumor, patient10


title: Single Sert+ neuron 111

description:
D10_SER40
Adult_DR_GEO_counts_cpm.txt

value: Principal DR


title: Single Sert+ neuron 113

description:
D11_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 110

description:
D1_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 112

description:
D11_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 168

description:
E23_SER39
Adult_DR_GEO_counts_cpm.txt


title: PilocyticAstrocytoma_7_tumor

source_name: Pilocytic astrocytoma, tumor, patient7

value: Female


title: PilocyticAstrocytoma_15_tumor

source_name: Pilocytic astrocytoma, tumor, patient15


title: PilocyticAstrocytoma_5_tumor

source_name: Pilocytic astrocytoma, tumor, patient5

value: Negative


title: PilocyticAstrocytoma_8_tumor

source_name: Pilocytic astrocytoma, tumor, patient8


title: PilocyticAstrocytoma_6_tumor

source_name: Pilocytic astrocytoma, tumor, patient6


title: PilocyticAstrocytoma_3_tumor

source_name: Pilocytic astrocytoma, tumor, patient3


title: Single Sert+ neuron 109

description:
D1_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 108

description:
C9_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 116

description:
D13_SER39
Adult_DR_GEO_counts_cpm.txt


title: PilocyticAstrocytoma_2_tumor

source_name: Pilocytic astrocytoma, tumor, patient2


title: Single Sert+ neuron 106

description:
C8_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 114

description:
D12_SER40
Adult_DR_GEO_counts_cpm.txt


title: ch12_wt_Hic_APR60h_tr4

city: bethesda

first: Seolkyoung

last: Jung

state: MD

address: 10 Center Dr

department: NIAMS

institute: NIH

description:
processed data file: ch12_wt_Hic_APR60h_tr4_inter.hic
processed data file: ch12_wt_Hic_APR60h_tr4_inter_30.hic
processed data file: ch12_wt_Hic_APR60h_inter.hic
processed data file: ch12_wt_Hic_APR60h_inter_30.hic

library_source: genomic

data_processing:
Base calling: Illumina CASAVA 1.8.2
ChIP-Seq_density: alignment: bowtie-1.1.1/bowtie -S -m 1 -p 20 -a --best --strata -n 2 -l 50
ChIP-Seq_density: filtering (uniquely aligned reads): samtools-0.1.19-1.2/samtools view -S -b -F4
ChIP-Seq_density: normalized tag density: custom script, maximum 2 reads with the same start position allowed
ATAC-Seq_density: alignment: bowtie-1.1.1/bowtie -S -m 1 -p 20 -a --best --strata -n 2 -l 50
ATAC-Seq_density: filtering (uniquely aligned reads): samtools-0.1.19-1.2/samtools view -S -b -F4
ATAC-Seq_density: normalized tag density: custom script, maximum 2 reads with the same start position allowed
mRNA-Seq_density:alignment: gsnap --use-sarray=0 --novelsplicing=0 --use-splicing refseq.splices.iit --format=sam -B 4
mRNA-Seq_density: filtering: samtools-1.2/samtools view -S -b -F132 -q 20
mRNA-Seq density: normalized tag density: bedtools-2.25/genomeCoverageBed -ibam -bg -split -scale normalization_factor, ucsc-314/bedGraphToBigWig
HiC-Seq: alignment: bwa-sw with default parameter (map each read separately)
HiC-Seq: filter: remove duplicates and near duplicates, removes reads that map to the same fragment and low quality reads (MAPQ <30)
HiC-Seq: generate contact matrix: juicer running with default parameter
4C-Seq: filtering: each read pair was tested for the presence of a perfect match to the respective bait primer as well as the bait spacer between the end of the primer and the restriction sites used in the corresponding experiment.
4C-Seq: mapping: bowtie-1.1.1/bowtie -X 500 -p 3 -v2 -k2 -m1 --phred64-quals -sam
4C-Seq: frequency: assign to NlaIII/CSP6i fragment (human) or DpnII/CSP6i fragment (mouse)to calculate fraction of restriction fragments for which 4C reads were found
CRISPR screen: Build artificial genome with primer and sgRNA constructs and make index with bowtie
CRISPR screen: alignment: bowtie -S -m 1 -p 4 -a --best --strata -n 2 -l 80
CRISPR screen: filtering and sort: samtools view -S -b -F4 | samtools sort -@ 2
CRISPR screen: samtools idxstats on aligned file
CRISPR screen: calculate frequency of each sgRNAs in each pool
CRISPR screen: samtools idxstats on aligned file
Genome_build: mm9 (MGSCv37), hg19 (GRCh37)
Supplementary_files_format_and_content: ChIP-Seq: .wig files tag density in 100 nt windows divided by windowsize and library size in millions to obtain normalized read density (rpkm).
Supplementary_files_format_and_content: ATAC-Seq: .wig files tag density in 100 nt windows divided by windowsize and library size in millions to obtain normalized read density (rpkm).
Supplementary_files_format_and_content: HiC-Seq: .hic format including contact matrix, normalization information generated by juicer.sh.
Supplementary_files_format_and_content: 4C-Seq: bed file showing read frequency in 100K window normalized by the number of fragments in each window.
Supplementary_files_format_and_content: mRNA-Seq:.wig files tag density divided by library size in millions to obtain normalized read density (rpkm).
Supplementary_files_format_and_content: CRISPRscreen: summarized text file on each codition, replicates, gene, sgRNAs.

molecule: genomic DNA

source_name: CH12 B cell line

growth_protocol: Cas9 expressing cells: Primary CD4+ cells expressing Cas9 were isolated from a Cas9 expressing mouse (Gt(ROSA)26Sortm1.1(CAG-cas9*,-EGFP)Fezh) (Platt et al., Cell, 2014). Spleen was triturated in DMEM, supernatant was filtered and immediately processed according to the MACS mouse CD4+ T Cell Isolation Kit (Miltenyi Biotec, Cologne, Germany), following the manufacturer’s protocol. Isolated cells were seeded in a six-well plate that was previously coated with aCD3 and aCD28 at a final concentration of 10 ug/mL in 1.6 mL of PBS. The plate was incubated at 37°C for a minimum of 30 min. The PBS was then removed and the cells added to the plate. Cas9 expression in E14 ES cells was obtained through infection with lentiCas9-blast virus (Addgene plasmid #52962). After Blasticidin selection (7.5 ug/mL), clones expressing Cas9 were isolated and expanded to be used for the multiCRISPR screen for essential Mediator subunits. Cas9 expression was assessed by Western blot analysis and cutting efficiency after transfection with sgRNA plasmids.

extract_protocol:
Extraction protocol:
ChIP-Seq: Cultured cells were fixed with 1% formaldehyde (Sigma) for 10’ at 37°C. Fixation was quenched by addition of glycine (Sigma) at a final concentration of 125 mM. Twenty million fixed cells were washed with PBS and resuspended in 1 ml of RIPA buffer (10 mM Tris [pH 7.6], 1 mM EDTA, 0.1% SDS, 0.1% sodium deoxycholate, 1% Triton X-100, 1× Complete Mini EDTA free proteinase inhibitor (Roche)) or stored at −80°C until further processing. Sonication was performed using Covaris S2 sonicator at duty cycle 20%, intensity 5, cycle/burst 200 for 30 min or Branson sonifier at amplitude 35%, 12 cycles of 20” sonication and 30” of pause. For native chip, chromatin was digested with MNase (Sigma) in digestion buffer (50 mM Tris-HCl, pH7.6, 1 mM CaCl2, 0.2% Triton X-100, butyrate 5 mM) for 5’ at 37°C and dialyzed against RIPA buffer for 2hrs at 4°C. Five micrograms of antibody were incubated with 40 μl of Dynabeads Protein A (or G) for 40 min at room temperature. Antibody-bound beads were added to 500 μl of sonicated or MNase-digested chromatin, incubated at 4°C overnight, and washed twice with RIPA buffer, twice with RIPA buffer containing 0.3M NaCl, twice with LiCl buffer (0.25 M LiCl, 0.5% Igepal-630, 0.5% sodium deoxycholate), once with TE (pH 8.0) plus 0.2% Triton X-100, and once with TE (pH 8.0). Crosslinking was reversed by incubating the beads at 65°C for 4 hr in the presence of 0.3% SDS and 1 mg/ml Proteinase K. ChIP DNA was purified by phenol-chloroform extraction followed by ethanol precipitation. MNase-Seq: 4x10^7 resting and activated B cells were digested with 24 different concentrations of MNaseI. After an initial RT-qPCR analysis and curve-fitting, the MNaseI concentrations for the most representative nucleosomal fraction was determined. The lowest three nucleosomal fractions (which corresponded to MNaseI concentrations of 0U, 0U, and 0.0026U) were pooled together and used as input control. Nucleosomal fractions 16-18 (which corresponded to enzyme concentrations of 0.068U, 0.045U, and 0.03U) were also pooled for further processing. Input samples were sonicated to obtain similar fragment sizes as the MNaseI-digested samples. DNA was then concentrated and each sample was spiked with 0.055mg of l DNA (also sonicated to match the sample size as was input DNA).
HiC-Seq: We used the same protocol for in situ HiC libraries as Rao et al., (Cell, 2014 Dec; 159:1-16).
4C-seq: The 4C assay was performed as previously described van de Werken et al. (2012) with minor modifications. Ten million of CH12 B cell line were crosslinked in 2% formaldehyde at 37°C for 10 min. The reaction was quenched by the addition of glycine (final concentration of 0.125 M). Cells were then washed with cold PBS and lysed (10 mM Tris-HCl, pH 8.0, 10 mM NaCl, 0.2% NP-40, 1× complete protease inhibitors [Roche]) at 4°C for 1 hr. Nuclei were incubated at 65°C for 30 min, 37°C for 30 min in 500 μl of restriction buffer (New England BioLabs DpnII buffer) containing 0.3% SDS. To sequester SDS, Triton X-100 was then added to a final concentration of 1.8%. DNA digestion was performed with 400 U of DpnII (New England Biolabs) at 37°C overnight. After heat inactivation (65°C for 30 min), the reaction was diluted to a final volume of 7 ml with ligation buffer containing 100 U T4 DNA Ligase (Roche) and incubated at 16°C overnight. Samples were then treated with 500 μg Proteinase K (Ambion) and incubated overnight at 65°C to reverse formaldehyde crosslinking. DNA was then purified by phenol extraction and ethanol precipitation. For circularization, the ligation junctions were digested with Csp6I (Fermentas) at 37°C overnight. After enzyme inactivation and phenol extraction, the DNA was religated in a 7 ml volume (1,000 U T4 DNA Ligase, Roche). Three micrograms of 4C library DNA was amplified with Expand Long template PCR System (Roche). Thermal cycle conditions were DNA denaturing for 2 min at 94°C, followed by 30 cycles of 15 s at 94°C, 1 min at 58°C, 3 min at 68°C, and a final step of 7 min at 68°C. Bait was amplified with inverse PCR primers as follows: 3RR with DpnII: _4C 5′- GCTTATCTGTAAAGAATGGGTC-3′, 3RR_Csp6i 5′-GGCCTTAGAAGGCTCTGTAC-3′. 4C-amplified DNA was microsequenced with the Illumina platform.
mRNA-seq: Total RNA from 10^6 of WT or ZF9-11 CH12 cells was isolated by Trizol extraction. mRNA was then isolated. ERCC-spike-in was added on some samples for quantitative comparison between two conditions.
ATACseq: One hundred thousand cultured cells were harvested for each point. Cell lysis and Transposition reaction were immediately performed according to Greenleaf’s group protocol (Corces et al., Nat Meth 2017; Buenrostro et al., Nat Meth 2013). Transposed DNA was immediately purified and stored at -20C before library preparation according to the above protocol.
CRISPRscreen: Cells were harvested at an early reference time-point (second day after infection) and two late time-points (14 and 21 days after infection). DNA was extracted using DNeasy Blood and tissue kit according to the manufacturer’s instructions (#69506, Qiagen).
Library construction protocol:
ChIP-Seq  Library was prepared in Ovation SP Ultralow library system (Nugen). 50 cycles of sequencing data were acquired on the HiSeq 2500 or 3000 (Illumina).
HiC-seq: DNA was isolated and prepared for paired-end Illumina sequencing following the genomic DNA protocol. 100 cycles of sequencing data were acquired on the HiSeq 2500 (Illumina).
4C-seq: DNA was prepared for paired-end Illumina sequencing. 50 cycles of sequencing data were acquired on the HiSeq 2500 (Illumina).
mRNA-seq: Standard RNA-Seq library preparation was performed following Illumina's RNA-Seq protocol v2. 50 cycles of sequencing data were acquired on HiSeq 2000, 2500 or 3000 (Illumina).
ATAC-seq: DNA was prepared for single-end Illumina sequencing. 50 cycles of sequencing data were acquired on the HiSeq 2000 (Illumina).
CRISPRscreen: DNA was prepared for single-end Illumina sequencing using staggered GeCKO readout primers (Shalem et al. 2013). 80 cycles of sequencing data were acquired on the MiSeq (Illumina).

treatment_protocol: CRISPR infection: The viral libraries which contain sgRNAs were used to infect Cas9 expressing E14 ES cells and primary CD4+ T cells isolated from the Rosa26-Cas9 expressing mice. Two hundred thousand cells were seeded in a six-well plate the day before infection. Concentrated viruses were added to the media in presence of Polybrene (6 ug/mL). The amount of virus was adjusted according to the viral titer to obtain a MOI of 0.3. Cells were transduced by spinfection at 1,350g for 90 min and 28-32°C. Infected cells were selected 24h after infection, using Puromycin at a final concentration of 1 ug/ml for ES cells and 2 ug/mL for CD4+ T cells.

tag: cell type

value: lymphoma cell line

tag: genotype/variation

value: WT


title: ch12_wt_Hic_APR60h_tr6

description:
processed data file: ch12_wt_Hic_APR60h_tr6_inter.hic
processed data file: ch12_wt_Hic_APR60h_tr6_inter_30.hic
processed data file: ch12_wt_Hic_APR60h_inter.hic
processed data file: ch12_wt_Hic_APR60h_inter_30.hic


title: ch12_wt_Hic_APR60h_tr5

description:
processed data file: ch12_wt_Hic_APR60h_tr5_inter.hic
processed data file: ch12_wt_Hic_APR60h_tr5_inter_30.hic
processed data file: ch12_wt_Hic_APR60h_inter.hic
processed data file: ch12_wt_Hic_APR60h_inter_30.hic


title: PilocyticAstrocytoma_4_tumor

source_name: Pilocytic astrocytoma, tumor, patient4

tag: tissue


title: ch12_wt_Hic_APR60h_tr3

description:
processed data file: ch12_wt_Hic_APR60h_tr3_inter.hic
processed data file: ch12_wt_Hic_APR60h_tr3_inter_30.hic
processed data file: ch12_wt_Hic_APR60h_inter.hic
processed data file: ch12_wt_Hic_APR60h_inter_30.hic


title: Single Sert+ neuron 107

description:
C9_SER25
Adult_DR_GEO_counts_cpm.txt

tag: strain

tag: age


title: Single Sert+ neuron 104

description:
C7_SER25
Adult_DR_GEO_counts_cpm.txt

tag: brain region

tag: genotype


title: ch12_wt_Hic_APR60h_tr2

description:
processed data file: ch12_wt_Hic_APR60h_tr2_inter.hic
processed data file: ch12_wt_Hic_APR60h_tr2_inter_30.hic
processed data file: ch12_wt_Hic_APR60h_inter.hic
processed data file: ch12_wt_Hic_APR60h_inter_30.hic

tag: cell line

tag: treatment


title: ch12_Med14Nsmash_Hic_APR60h_tr6

description:
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr6_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr6_inter_30.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter_30.hic


title: Single Sert+ neuron 101

description:
C5_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 102

description:
C5_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 103

description:
C6_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 105

description:
C7_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 100

description:
C4_SER40
Adult_DR_GEO_counts_cpm.txt


title: PilocyticAstrocytoma_9_tumor

source_name: Pilocytic astrocytoma, tumor, patient9

tag: gender


title: Single Sert+ neuron 99

description:
C3_SER39
Adult_DR_GEO_counts_cpm.txt


title: ch12_Med14Nsmash_Hic_APR60h_tr5

description:
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr5_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr5_inter_30.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter_30.hic


title: ch12_Med14Nsmash_Hic_APR60h_tr7

description:
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr7_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr7_inter_30.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter_30.hic


title: Single Sert+ neuron 98

description:
C3_SER25
Adult_DR_GEO_counts_cpm.txt


title: PilocyticAstrocytoma_1_tumor

source_name: Pilocytic astrocytoma, tumor, patient1

tag: age at diagnosis


title: ch12_wt_Hic_APR60h_tr1

description:
processed data file: ch12_wt_Hic_APR60h_tr1_inter.hic
processed data file: ch12_wt_Hic_APR60h_tr1_inter_30.hic
processed data file: ch12_wt_Hic_APR60h_inter.hic
processed data file: ch12_wt_Hic_APR60h_inter_30.hic


title: ch12_Med14Nsmash_Hic_APR60h_tr3

description:
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr3_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr3_inter_30.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter_30.hic


title: Single Sert+ neuron 97

description:
C24_SER40
Adult_DR_GEO_counts_cpm.txt


title: ch12_Med14Nsmash_Hic_APR60h_tr2

description:
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr2_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr2_inter_30.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter_30.hic


title: Single Sert+ neuron 96

description:
C23_SER39
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 94

description:
C22_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 95

description:
C23_SER25
Adult_DR_GEO_counts_cpm.txt


title: shSuv39h2 rep2

city: shanghai

first: Jin

last: Sun

department: life science and technology

country: China

institute: Tongji University

data_processing:
Illumina Casava1.7 software used for basecalling.
Sequenced reads were trimed for adaptor and low-quality sequence and then mapped to mm10 whole genome using tophat v2.0.13 with default parameters
Differences in expression were determined using Cuffdiff v2.2.1
Genome_build: mm10
Supplementary_files_format_and_content: tab-delimited text files include FPKM values for each Sample

source_name: mES

growth_protocol: Mouse embryonic stem cells (mESCs, J1 strain) seeded on inactivated mouse embryonic fibroblast cells (MEF) feeder were cultured in Dulbecco’s modified Eagle’s medium (DMEM, Gibco#11995) supplemented with 10% fetal bovine serum (FBS, Gibco#16000-044), 1×non-essential amino acids (NEAA, Gibco#11140), 1×GlutaMAX-I (Gibco#35050-061), 7μM β-mercaptoethanol (Ameresco, Biotechnology grade, Cat#M8210), 10ng/ml mouse leukemia inhibitory factor (Millipore, Chemicon, Cat#LIF2050) and 1% antibiotic (Pen Strep, Gibco#15140-122). All mES cells were sub-passaged every 3-4 days by digesting the cell clone into single cell suspension using 0.25% Trypsin-EDTA (Gibco#25200072), and the resulted cells were divided on 3-5 fresh feeder-plates.

extract_protocol:
A total amount of 2μg RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using NEBNext®Ultra™ RNA Library Prep Kit for Illumina® (NEB, USA) following manual instructions and index codes were added to attribute sequences to each sample. RNA-seq libraries were prepared with TruSeq RNA Library Prep Kit v2 (Illumina) according to the manufacturer instruction, and were sequenced on an Illumina HiSeq X-10).
RNA libraries were prepared for sequencing using standard Illumina protocols

treatment_protocol: total RNA were extracted using Trizol reagent and used for mRNA capture.

value: embryonic stem cell


title: Single Sert+ neuron 93

description:
C21_SER39
Adult_DR_GEO_counts_cpm.txt


title: shSuv39h2 rep1


title: shSuv39h1 rep2


title: shSuv39h1 rep1


title: shNC rep2


title: ch12_Med14Nsmash_Hic_APR60h_tr4

description:
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr4_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr4_inter_30.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter_30.hic


title: Single Sert+ neuron 90

description:
C2_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 89

description:
C19_SER39
Adult_DR_GEO_counts_cpm.txt


title: H3.1K36M rep2


title: Single Sert+ neuron 91

description:
C20_SER40
Adult_DR_GEO_counts_cpm.txt


title: H3.1K36M rep1


title: Single Sert+ neuron 88

description:
C19_SER25
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 87

description:
C18_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 86

description:
C17_SER39
Adult_DR_GEO_counts_cpm.txt


title: H3.1K9M rep2


title: H3.1K9M rep1


title: H3.1WT rep2


title: H3.1WT rep1


title: Single Sert+ neuron 85

description:
C17_SER25
Adult_DR_GEO_counts_cpm.txt


title: ch12_Med14Nsmash_Hic_APR60h_tr1

description:
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr1_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_tr1_inter_30.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter.hic
processed data file: ch12_Med14Nsmash_Hic_APR60h_inter_30.hic


title: Single Sert+ neuron 84

description:
C16_SER40
Adult_DR_GEO_counts_cpm.txt


title: Single Sert+ neuron 83

description:
C15_SER39
Adult_DR_GEO_counts_cpm.txt