title: Tw2+ 2

city: Dallas

first: Yi-Li

last: Min

state: Texas

address: 6000 Harry Hines Blvd

department: Molecular Biology

institute: UT Southwestern Medical Center

description: Tw2+ non-CMs-Replicate-2

data_processing:
Quality assessment of the RNA-Seq data was done using NGS-QC-Toolkit (Patel and Jain, 2012) with default setting
Quality filtered reads generated by the tool were then aligned to the mouse reference genome GRCm38 (mm10) using the Tophat2 (v 2.0.0 ) aligner (Kim et al., 2013) using default setting.
Differential gene expression analysis was done using the R package DESeq2 (v 1.6.3) (Anders and Huber, 2010).
Read counts were normalized by taking the median of each gene count across samples and dividing each sample gene count by the relative ratio of library sizes between the calculated median and sample size. The averaged normalized expressions values of the samples were used to calculate fold change and p-values.
Genome_build: GRCm38 (mm10)
Supplementary_files_format_and_content: Raw count for each gene

source_name: Tw2+ non-CMs

extract_protocol:
At 10 days after first dose of TMX treatment, pool of cardiac cells were isolated using Langendorff perfusion. Cells were then further separated by gravity and BSA gradient into cardiomyocytes enriched and non-cardiomyocytes enriched population. Staining of Mitoview633 (Biotium) were performed on non-cardiomyocytes population, then sorted on BD Aria cell sorter based on tdTO and Mitoview633 signal. TdTO+ cells and TdTO- cells were harvested for RNA-seq analysis. Total RNA was extracted using QIAGEN Rneasy mini kit.
RNA libraries were prepared for sequencing using standard Illumina protocols

treatment_protocol: Tw2-CreERT2;R26-tdTO mice were treated with TMX at 8 weeks of age.

value: Heart-non-CMs

value: 9 weeks

tag: genotype


title: Tw2+ 3

status: Public on Jan 08 2020

type: SRA

country: USA

description: Tw2+ non-CMs-Replicate-3

library_source: transcriptomic

molecule: total RNA

organism: Mus musculus

tag: tissue

tag: age


title: genomic DNA from whole blood 18

status: Public on Jan 09 2020

type: genomic

city: Boston

first: Sarah

last: Booth

state: Massachusetts

address: 711 Washington St.

institute: JM-USDA Human Nutrition Research Center on Aging at Tufts University

description: whole blood

hyb_protocol: Bisulphite-converted DNA was amplified, fragmented and hybridised to Illumina MethylationEPIC Beadchip using standard Illumina protocol (performed at Yale Center for Genome Analysis)

scan_protocol: Standard YCGA procedure

data_processing: Noob + BMIQ normalization

label: Cy3 and Cy5

molecule: genomic DNA

organism: Homo sapiens

source_name: whole blood 18

label_protocol: Standard Illumina Protocol

extract_protocol: genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions

tag: responder

value: TRUE

tag: Sex

value: F


title: NOD.B10 Rep 2

city: Buffalo

first: Jill

last: Kramer

state: NY

address: 3435 Main Street

institute: State University of New York at Buffalo

data_processing:
illumina Bcl2fastq
hisat2/2.0.5
featureCoutns v1.5.1
Genome_build: Grcm38
Supplementary_files_format_and_content: a text file includes raw counts

source_name: Spleen

extract_protocol:
Spleens were isolated from NOD.B10 females at 26 weeks of age and from age and gender-matched BL/10 controls. RNA was isolated according to standard protocols using a Qiagen RNeasy kit. RNA meeting quality standards (>8.0) were used as input for RNA-seq using Illumina’sTru-seq low-throughput multiplex protocol. Three biological replicates for each strain were sequenced in parallel using an Illumina HiSeq 2500, with 50 cycle single-end read reactions.
TruSeq RNA Library Prep

tag: strain

value: 36 weeks

tag: gender

value: female


title: genomic DNA from whole blood 1

description: whole blood

source_name: whole blood 1


title: Tw2+ 1

description: Tw2+ non-CMs-Replicate-1


title: 307 cell vector control

city: South San Francisco

first: Steffen

last: Durinck

state: CA

address: 1 DNA Way

institute: Genentech

data_processing:
Illumina Casava 1.8
Sequencing reads were filtered to have at least an average base quality of 23 and were then aligned to GRCm38  using GSNAP
Expression counts per gene were obtained by counting the number of reads aligned uniquely to each gene locus as defined by NCBI and Ensembl gene annotations and RefSeq mRNA sequences
Genome_build: GRCm38
Supplementary_files_format_and_content: Excel file with gene expression counts

source_name: mammary tumor cell line

extract_protocol:
RNeasy Kit (Qiagen, Hilden, Germany)
TruSeq Stranded Total RNA Library Prep Kit
following manufacturer user guide from Illumina

tag: celltype

value: mammary tumor primary cell line


title: Tw2- 2

description: Tw2- non-CMs-Replicate-2

source_name: Tw2- non-CMs


title: Tw2- 3

description: Tw2- non-CMs-Replicate-3


title: genomic DNA from whole blood 3

description: whole blood

source_name: whole blood 3

value: M


title: Tw2- 1

description: Tw2- non-CMs-Replicate-1


title: IMJCWT2: Wild-type replicate 2 mRNA-seq

city: Chicago

first: Ivan

last: Moskowitz

state: IL

address: 900 E 57th St

department: Pediatrics, Pathology, and Human Genetics

institute: University of Chicago

description: mRNAseq

data_processing:
Reads were mapped to mouse genome with TopHat2 (v 2.1.1). Reads mapped to the mitochondrial genome, and with phred score < 30 were excluded. Counts were retrieved with HTseq (v.0.6.0)60 in union mode.  Lastly, counts were analyzed for differential expression with R (3.4) package DEseq
Genome_build: mm9

molecule: polyA RNA

source_name: Retina

extract_protocol: Libraries were prepared from this RNA starting with 1 g per sample and using the mRNA‐seq Sample Prep Kit (Illumina) as per recommended instructions. After Ribozero purification and removing only ribosomal RNA, barcoded libraries were prepared according to Illumina's instructions (2013) accompanying the TruSeq RNA Sample prep kit v2 (Part# RS‐122‐2001). Libraries were quantitated using the Agilent Bio‐analyzer (model 2100) and pooled in equimolar amounts. The pooled libraries were sequenced with stranded 50-bp single-end reads on the HiSeq2500 in Rapid Run Mode

value: retina

value: post natal day 21

tag: genotype/variation

value: wild-type


title: genomic DNA from whole blood 11

description: whole blood

source_name: whole blood 11


title: ChIP-seq_VCaP_input_R1881_rep1

city: Kuopio

first: Einari

middle: A

last: Niskanen

address: Yliopistonranta 8

department: School of Medicine

country: Finland

institute: University of Eastern Finland

description: ChIP-seq sample

library_source: genomic

data_processing:
The quality of raw reads was analyzed by FastQC and FASTX-toolkit was used for preprocessing raw reads (removal of artifacts, trimming reads, quality filtering and collapsing identical reads).
For ChIP-seq, reads were aligned against human genome hg19 with Bowtie software (version 0.12.9) with the command line: -v 1 -k 1 -m 1 -f -S --best hg19. Peak calling was done in HOMER (version 4.10.3) using findPeaks command and approppriate input as a control. Two replicates were compared with each other using bedTools (intersectBed) and only those binding sites found in both replicates were used for further analysis.
Genome_build: hg19
Supplementary_files_format_and_content: For ChIP-seq, the genomic intervals of BCOR binding sites that were common to two replicates are given in bed format. For AR and H2AK119ub, signal tracks are given in tdf format.

source_name: VCaP cells

growth_protocol: VCaP cells were maintained in DMEM (Gibco, Invitrogen, 41965-039) supplemented with 10% Defined FBS (Hyclone, SH30070.03), 100U/ml penicillin and 100 ug/ml streptomycin. Before hormone treatments, cells were kept on DMEM supplemented with 2.5% charcoal-treated FBS (steroid-depleted medium).

extract_protocol:
For ChIP-seq, VCaP cells were silenced using siRNA transfection for three days when indicate, grown on steroid-depleted medium for two days and treated for 1h with R1881 (10mM) or equal volume of vehicle (ethanol). Samples were fixed for 10 min. in room temperature with 1% (v/v) formaldehyde, fragmented to 200-400bp fragments by sonication (Bioruptor, Diagenode) and chromatin immunoprecipitation was done using rabbit polyclonal anti-BCOR antibody (A310-672A, Bethyl Laboratories), rabbit antiserum against AR or anti-H2AK119ub antibody (#8240, Cell Signaling Technology). Two biological replicates of each condition were sequenced using Illumina HiSeq 2000 or NextSeq500 at EMBL GeneCore (Heidelberg, Germany).
Library preparation was done using NEBNext Ultra II kit (New England Biolabs) and sequenced using Illumina HiSeq 2000 or NextSeq 500 at EMBL GeneCore (Heidelberg, Germany).

treatment_protocol: See samples.

tag: cell line

value: VCaP

tag: treatment 1

value: steroid-depleted medium, 24h

tag: treatment 2

tag: chip antibody

value: rabbit monoclonal anti-H2AK119ub antibody (Cell Signaling Technology, 8240)


title: ChIP-seq_VCaP_AR_siBCOR-EtOH_rep1

description: ChIP-seq sample

value: siBCOR transfection, 72h

tag: treatment 3

value: ethanol, 1h

value: rabbit antiserum against AR


title: ChIP-seq_VCaP_input_EtOH_rep1

description: ChIP-seq sample


title: ChIP-seq_VCaP_H2AK119ub_EtOH_rep2

description: ChIP-seq sample


title: Old_5541_P2_88

city: Singapore

first: Hassen

last: Kared

address: 8A Biomedical Grove - Immunos Building - Level 3

country: Singapore

institute: Singapore Immunology Network (SIgN) - A*STAR

description:
RHT2181
TPM_sc_old.txt

data_processing:
Pair-end raw reads were aligned to human reference genome using RSEM version 1.3.0.
Transcript Per Million read (TPM) values were calculated using RSEM version 1.3.0.
We filtered out low-quality cells from our data set based on a threshold for the number of genes detected (a minimum of 200 unique genes per cell). All genes that were not detected in at least 0.4% of all our single cells were discarded.
Genome_build: GRCh38 version 25
Supplementary_files_format_and_content: tab-delimited text files include TPM values for Young donors (716 cells) and Old donors (725 cells)

source_name: Naïve CD4 T cell

extract_protocol:
1mg/ml BSA Lysis buffer (Ambion Thermo Fisher Scientific, Waltham, MA, USA);
Single cell cDNA libraries were using the SMARTSeq v2 protocol (Picelli et al., 2014) with the following modifications: Use of 250 pg cDNA with 1/5 reaction of Illumina Nextera XT kit (Illumina, San Diego, CA, USA). All samples were subjected to an indexed paired-end sequencing run of 2x51 cycles on an Illumina HiSeq 2000 system (Illumina, San Diego, CA, USA) (192 samples/lane).

tag: donorid

tag: plateid

tag: batch

tag: cell type

value: Naive CD4 T cell

tag: developmental stage

value: Old


title: Old_5541_P2_87

description:
RHT2180
TPM_sc_old.txt


title: Old_5541_P2_89

description:
RHT2182
TPM_sc_old.txt


title: ChIP-seq_VCaP_H2AK119ub_R1881_rep1

description: ChIP-seq sample


title: Old_5541_P2_92

description:
RHT2185
TPM_sc_old.txt


title: Old_5541_P2_86

description:
RHT2179
TPM_sc_old.txt


title: Old_5541_P2_93

description:
RHT2186
TPM_sc_old.txt


title: ChIP-seq_VCaP_H2AK119ub_R1881_rep2

description: ChIP-seq sample


title: Old_5541_P2_91

description:
RHT2184
TPM_sc_old.txt


title: Old_5541_P2_90

description:
RHT2183
TPM_sc_old.txt


title: Old_5541_P2_84

description:
RHT2177
TPM_sc_old.txt


title: Old_5541_P2_85

description:
RHT2178
TPM_sc_old.txt


title: Old_5541_P2_80

description:
RHT2173
TPM_sc_old.txt


title: Old_5541_P2_81

description:
RHT2174
TPM_sc_old.txt


title: genomic DNA from whole blood 9

description: whole blood

source_name: whole blood 9

value: TRUE

tag: age


title: Old_5541_P2_83

description:
RHT2176
TPM_sc_old.txt


title: Old_5541_P2_79

description:
RHT2172
TPM_sc_old.txt


title: ChIP-seq_VCaP_H2AK119ub_EtOH_rep1

description: ChIP-seq sample


title: Old_5541_P2_77

description:
RHT2170
TPM_sc_old.txt


title: Old_5541_P2_76

description:
RHT2169
TPM_sc_old.txt


title: Old_5541_P2_75

description:
RHT2168
TPM_sc_old.txt


title: Old_5541_P2_78

description:
RHT2171
TPM_sc_old.txt


title: Old_5541_P2_74

description:
RHT2167
TPM_sc_old.txt


title: Old_5541_P2_73

description:
RHT2166
TPM_sc_old.txt


title: Old_5541_P2_72

description:
RHT2165
TPM_sc_old.txt


title: Old_5541_P2_71

description:
RHT2164
TPM_sc_old.txt


title: Old_5541_P2_63

description:
RHT2156
TPM_sc_old.txt


title: Old_5541_P2_68

description:
RHT2161
TPM_sc_old.txt


title: Old_5541_P2_66

description:
RHT2159
TPM_sc_old.txt


title: Old_5541_P2_70

description:
RHT2163
TPM_sc_old.txt


title: Old_5541_P2_64

description:
RHT2157
TPM_sc_old.txt


title: Old_5541_P2_65

description:
RHT2158
TPM_sc_old.txt


title: Old_5541_P2_61

description:
RHT2154
TPM_sc_old.txt


title: Old_5541_P2_62

description:
RHT2155
TPM_sc_old.txt


title: Old_5541_P2_60

description:
RHT2153
TPM_sc_old.txt


title: Old_5541_P2_56

description:
RHT2149
TPM_sc_old.txt


title: 100119 iMK H3K27ac

city: University Park

first: Ross

last: Hardison

state: PA

address: 303 Wartik Lab

institute: Pennsylvania State University

data_processing:
Mapping to reference genome with Bowtie 1.0.0 using parameters --chunkmbs 1024 -y -n 2  --best -k 1 --maxbts 800 -l 28 -e 80 --sam-nohead --sam
Wiggle generated with MACS using parameters --nomodel --shiftsize=120--format BAM --gsize 1870000000 --tsize 36 --bw 120 --mfold 12 --wig --space 1
Peaks called with Sicer V1.1 using parameters mm10 1 200 150 0.74 600 0.01
Filter blacklist regions from peaks, and convert to broadpeak format (see UCSC Genome Browser for format specs)
UCSC's wigToBigWig to convert wiggle track
Genome_build: mm10
Supplementary_files_format_and_content: bigWig, signal from Macs
Supplementary_files_format_and_content: broadpeak, peaks from Sicer

source_name: bone marrow

extract_protocol:
Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody.
Libraries were prepared according to Illumina's instructions accompanying TruSeq ChIP-seq Sample Preparation Kit. (Part#  IP-202-1012). In brief, ChIP-enriched, fragmented DNA was subjected to end repair to generate blunt-end double stranded DNA, adenylation of 3’ ends, and adaptor ligation. Following ligation, SPRIselect (Beckman Coulter) beads were used at 0.9X and 0.6X for left and right side selection, respectively, to obtain an average library target size of ~300 bp. After size selection, fragments were amplified for 16 cycles, and PCR products were purified using Agencourt AMPureXP beads (Beckman Coulter).

tag: chip ab

value: H3K27ac (Abcam, ab4729)

value: adult

tag: cell isolation markers

value: megakaryocyte


title: Old_5541_P2_82

description:
RHT2175
TPM_sc_old.txt


title: Old_5541_P2_59

description:
RHT2152
TPM_sc_old.txt


title: Old_5541_P2_57

description:
RHT2150
TPM_sc_old.txt


title: Old_5541_P2_53

description:
RHT2146
TPM_sc_old.txt


title: Old_5541_P2_50

description:
RHT2143
TPM_sc_old.txt


title: Old_5541_P2_48

description:
RHT2141
TPM_sc_old.txt


title: Old_5541_P2_47

description:
RHT2140
TPM_sc_old.txt


title: Old_5541_P2_67

description:
RHT2160
TPM_sc_old.txt


title: Old_5541_P2_44

description:
RHT2137
TPM_sc_old.txt


title: Old_5541_P2_52

description:
RHT2145
TPM_sc_old.txt


title: Old_5541_P2_46

description:
RHT2139
TPM_sc_old.txt


title: Old_5541_P2_42

description:
RHT2135
TPM_sc_old.txt


title: Old_5541_P2_45

description:
RHT2138
TPM_sc_old.txt


title: Old_5541_P2_58

description:
RHT2151
TPM_sc_old.txt


title: Old_5541_P2_40

description:
RHT2132
TPM_sc_old.txt


title: Old_5541_P2_55

description:
RHT2148
TPM_sc_old.txt


title: Old_5541_P2_54

description:
RHT2147
TPM_sc_old.txt


title: Old_5541_P2_51

description:
RHT2144
TPM_sc_old.txt


title: Old_5541_P2_35

description:
RHT2127
TPM_sc_old.txt


title: Old_5541_P2_33

description:
RHT2125
TPM_sc_old.txt


title: Old_5541_P2_41

description:
RHT2133
TPM_sc_old.txt


title: Old_5541_P2_31

description:
RHT2122
TPM_sc_old.txt


title: Old_5541_P2_36

description:
RHT2128
TPM_sc_old.txt


title: Old_5541_P2_49

description:
RHT2142
TPM_sc_old.txt


title: Old_5541_P2_30

description:
RHT2121
TPM_sc_old.txt


title: Old_5541_P2_38

description:
RHT2130
TPM_sc_old.txt


title: Old_5541_P2_37

description:
RHT2129
TPM_sc_old.txt


title: Old_5541_P2_34

description:
RHT2126
TPM_sc_old.txt


title: Old_5541_P2_29

description:
RHT2120
TPM_sc_old.txt


title: Old_5541_P2_39

description:
RHT2131
TPM_sc_old.txt


title: Old_5541_P2_28

description:
RHT2119
TPM_sc_old.txt


title: Old_5541_P2_69

description:
RHT2162
TPM_sc_old.txt


title: Old_5541_P2_27

description:
RHT2118
TPM_sc_old.txt


title: Old_5541_P2_25

description:
RHT2116
TPM_sc_old.txt


title: Old_5541_P2_32

description:
RHT2123
TPM_sc_old.txt


title: Old_5541_P2_23

description:
RHT2114
TPM_sc_old.txt


title: Old_5541_P2_21

description:
RHT2112
TPM_sc_old.txt


title: Old_5541_P2_22

description:
RHT2113
TPM_sc_old.txt


title: Old_5541_P2_20

description:
RHT2111
TPM_sc_old.txt


title: Old_5541_P2_19

description:
RHT2110
TPM_sc_old.txt


title: Old_5541_P2_17

description:
RHT2108
TPM_sc_old.txt


title: Old_5541_P2_12

description:
RHT2103
TPM_sc_old.txt


title: Old_5541_P2_15

description:
RHT2106
TPM_sc_old.txt


title: Old_5541_P2_14

description:
RHT2105
TPM_sc_old.txt


title: Old_5541_P2_16

description:
RHT2107
TPM_sc_old.txt


title: Old_5541_P2_10

description:
RHT2101
TPM_sc_old.txt


title: Old_5541_P2_13

description:
RHT2104
TPM_sc_old.txt


title: Old_5541_P2_9

description:
RHT2100
TPM_sc_old.txt


title: Old_5541_P2_8

description:
RHT2099
TPM_sc_old.txt


title: Old_5541_P2_2

description:
RHT2093
TPM_sc_old.txt


title: Old_5541_P2_11

description:
RHT2102
TPM_sc_old.txt


title: Old_5541_P2_3

description:
RHT2094
TPM_sc_old.txt


title: Old_5541_P2_6

description:
RHT2097
TPM_sc_old.txt


title: Old_5541_P1_96

description:
RHT2091
TPM_sc_old.txt


title: Old_5541_P2_4

description:
RHT2095
TPM_sc_old.txt


title: Old_5541_P2_1

description:
RHT2092
TPM_sc_old.txt


title: Old_5541_P2_5

description:
RHT2096
TPM_sc_old.txt


title: Old_5541_P2_26

description:
RHT2117
TPM_sc_old.txt


title: Old_5541_P1_94

description:
RHT2089
TPM_sc_old.txt


title: Old_5541_P2_18

description:
RHT2109
TPM_sc_old.txt


title: Old_5541_P1_95

description:
RHT2090
TPM_sc_old.txt


title: Old_5541_P1_93

description:
RHT2088
TPM_sc_old.txt


title: Old_5541_P2_24

description:
RHT2115
TPM_sc_old.txt


title: Old_5541_P1_91

description:
RHT2086
TPM_sc_old.txt


title: Old_5541_P1_89

description:
RHT2084
TPM_sc_old.txt


title: Old_5541_P1_90

description:
RHT2085
TPM_sc_old.txt


title: IMJCKO2: Nrl-KO replicate 2 mRNA-seq

description: mRNAseq

tag: tissue

value: Nrl knock-out


title: Old_5541_P1_92

description:
RHT2087
TPM_sc_old.txt


title: Old_5541_P1_88

description:
RHT2083
TPM_sc_old.txt


title: Old_5541_P1_86

description:
RHT2081
TPM_sc_old.txt


title: Old_5541_P2_7

description:
RHT2098
TPM_sc_old.txt


title: Old_5541_P1_85

description:
RHT2080
TPM_sc_old.txt


title: Old_5541_P1_87

description:
RHT2082
TPM_sc_old.txt


title: Old_5541_P1_81

description:
RHT2076
TPM_sc_old.txt


title: Old_5541_P1_84

description:
RHT2079
TPM_sc_old.txt


title: Old_5541_P1_83

description:
RHT2078
TPM_sc_old.txt


title: Old_5541_P1_79

description:
RHT2074
TPM_sc_old.txt


title: Old_5541_P1_76

description:
RHT2071
TPM_sc_old.txt


title: Old_5541_P1_77

description:
RHT2072
TPM_sc_old.txt


title: Old_5541_P1_80

description:
RHT2075
TPM_sc_old.txt


title: Old_5541_P1_82

description:
RHT2077
TPM_sc_old.txt


title: Old_5541_P1_74

description:
RHT2069
TPM_sc_old.txt


title: Old_5541_P1_75

description:
RHT2070
TPM_sc_old.txt


title: Old_5541_P1_73

description:
RHT2068
TPM_sc_old.txt


title: Old_5541_P1_70

description:
RHT2065
TPM_sc_old.txt


title: Old_5541_P1_71

description:
RHT2066
TPM_sc_old.txt


title: Old_5541_P1_68

description:
RHT2063
TPM_sc_old.txt


title: Old_5541_P1_67

description:
RHT2062
TPM_sc_old.txt


title: Old_5541_P1_69

description:
RHT2064
TPM_sc_old.txt


title: Old_5541_P1_66

description:
RHT2061
TPM_sc_old.txt


title: Old_5541_P1_64

description:
RHT2059
TPM_sc_old.txt


title: Old_5541_P1_63

description:
RHT2058
TPM_sc_old.txt


title: Old_5541_P1_61

description:
RHT2056
TPM_sc_old.txt


title: Old_5541_P1_78

description:
RHT2073
TPM_sc_old.txt


title: Old_5541_P1_60

description:
RHT2055
TPM_sc_old.txt


title: Old_5541_P1_62

description:
RHT2057
TPM_sc_old.txt


title: Old_5541_P1_59

description:
RHT2054
TPM_sc_old.txt


title: Old_5541_P1_58

description:
RHT2053
TPM_sc_old.txt


title: Old_5541_P1_72

description:
RHT2067
TPM_sc_old.txt


title: Old_5541_P1_56

description:
RHT2051
TPM_sc_old.txt


title: Old_5541_P1_57

description:
RHT2052
TPM_sc_old.txt


title: Old_5541_P1_54

description:
RHT2049
TPM_sc_old.txt


title: Old_5541_P1_52

description:
RHT2047
TPM_sc_old.txt


title: Old_5541_P1_49

description:
RHT2044
TPM_sc_old.txt


title: Old_5541_P1_48

description:
RHT2043
TPM_sc_old.txt


title: Old_5541_P1_55

description:
RHT2050
TPM_sc_old.txt


title: Old_5541_P1_51

description:
RHT2046
TPM_sc_old.txt


title: Old_5541_P1_45

description:
RHT2040
TPM_sc_old.txt


title: Old_5541_P1_46

description:
RHT2041
TPM_sc_old.txt


title: Old_5541_P1_47

description:
RHT2042
TPM_sc_old.txt


title: Old_5541_P1_43

description:
RHT2038
TPM_sc_old.txt


title: Old_5541_P1_41

description:
RHT2036
TPM_sc_old.txt


title: Old_5541_P1_42

description:
RHT2037
TPM_sc_old.txt


title: Old_5541_P1_65

description:
RHT2060
TPM_sc_old.txt


title: Old_5541_P1_39

description:
RHT2034
TPM_sc_old.txt


title: Old_5541_P1_38

description:
RHT2033
TPM_sc_old.txt


title: Old_5541_P1_53

description:
RHT2048
TPM_sc_old.txt


title: Old_5541_P1_35

description:
RHT2030
TPM_sc_old.txt


title: Old_5541_P1_36

description:
RHT2031
TPM_sc_old.txt


title: Old_5541_P1_40

description:
RHT2035
TPM_sc_old.txt


title: Old_5541_P1_50

description:
RHT2045
TPM_sc_old.txt


title: Old_5541_P1_32

description:
RHT2027
TPM_sc_old.txt


title: Old_5541_P1_34

description:
RHT2029
TPM_sc_old.txt


title: Old_5541_P1_29

description:
RHT2024
TPM_sc_old.txt


title: Old_5541_P1_30

description:
RHT2025
TPM_sc_old.txt


title: Old_5541_P1_33

description:
RHT2028
TPM_sc_old.txt


title: Old_5541_P1_25

description:
RHT2020
TPM_sc_old.txt


title: Old_5541_P1_28

description:
RHT2023
TPM_sc_old.txt


title: Old_5541_P1_27

description:
RHT2022
TPM_sc_old.txt


title: Old_5541_P1_31

description:
RHT2026
TPM_sc_old.txt


title: Old_5541_P1_23

description:
RHT2018
TPM_sc_old.txt


title: Old_5541_P1_26

description:
RHT2021
TPM_sc_old.txt


title: Old_5541_P1_44

description:
RHT2039
TPM_sc_old.txt


title: Old_5541_P1_24

description:
RHT2019
TPM_sc_old.txt


title: Old_5541_P1_21

description:
RHT2016
TPM_sc_old.txt


title: Old_5541_P1_19

description:
RHT2014
TPM_sc_old.txt


title: Old_5541_P1_18

description:
RHT2013
TPM_sc_old.txt


title: Old_5541_P1_20

description:
RHT2015
TPM_sc_old.txt


title: Old_5541_P1_17

description:
RHT2012
TPM_sc_old.txt


title: Old_5541_P1_37

description:
RHT2032
TPM_sc_old.txt


title: Old_5541_P1_16

description:
RHT2011
TPM_sc_old.txt


title: Old_5541_P1_15

description:
RHT2010
TPM_sc_old.txt


title: Old_5541_P1_14

description:
RHT2009
TPM_sc_old.txt


title: Old_5541_P1_13

description:
RHT2008
TPM_sc_old.txt


title: Old_5541_P1_12

description:
RHT2007
TPM_sc_old.txt


title: Old_5541_P1_11

description:
RHT2006
TPM_sc_old.txt


title: Old_5541_P1_9

description:
RHT2004
TPM_sc_old.txt


title: Old_5541_P1_22

description:
RHT2017
TPM_sc_old.txt


title: Old_5541_P1_10

description:
RHT2005
TPM_sc_old.txt


title: Old_5541_P1_7

description:
RHT2002
TPM_sc_old.txt


title: Old_5541_P1_5

description:
RHT2000
TPM_sc_old.txt


title: Old_5541_P1_8

description:
RHT2003
TPM_sc_old.txt


title: Old_5541_P1_4

description:
RHT1999
TPM_sc_old.txt


title: Old_5541_P1_6

description:
RHT2001
TPM_sc_old.txt


title: Old_5541_P1_1

description:
RHT1996
TPM_sc_old.txt


title: Old_1957_P2_90

description:
RHT1991
TPM_sc_old.txt


title: Old_1957_P2_89

description:
RHT1990
TPM_sc_old.txt


title: Old_1957_P2_94

description:
RHT1995
TPM_sc_old.txt


title: Old_1957_P2_88

description:
RHT1989
TPM_sc_old.txt


title: Old_1957_P2_86

description:
RHT1987
TPM_sc_old.txt


title: Old_1957_P2_92

description:
RHT1993
TPM_sc_old.txt


title: Old_1957_P2_93

description:
RHT1994
TPM_sc_old.txt


title: Old_1957_P2_81

description:
RHT1982
TPM_sc_old.txt


title: Old_1957_P2_82

description:
RHT1983
TPM_sc_old.txt


title: Old_1957_P2_83

description:
RHT1984
TPM_sc_old.txt


title: Old_1957_P2_80

description:
RHT1981
TPM_sc_old.txt


title: Old_1957_P2_84

description:
RHT1985
TPM_sc_old.txt


title: Old_1957_P2_79

description:
RHT1980
TPM_sc_old.txt


title: Old_1957_P2_78

description:
RHT1979
TPM_sc_old.txt


title: Old_1957_P2_77

description:
RHT1978
TPM_sc_old.txt


title: Old_1957_P2_76

description:
RHT1977
TPM_sc_old.txt


title: Old_5541_P1_2

description:
RHT1997
TPM_sc_old.txt


title: Old_1957_P2_72

description:
RHT1973
TPM_sc_old.txt


title: Old_1957_P2_75

description:
RHT1976
TPM_sc_old.txt


title: Old_5541_P2_43

description:
RHT2136
TPM_sc_old.txt


title: Old_5541_P1_3

description:
RHT1998
TPM_sc_old.txt


title: Old_1957_P2_71

description:
RHT1972
TPM_sc_old.txt


title: Old_1957_P2_91

description:
RHT1992
TPM_sc_old.txt


title: Old_1957_P2_74

description:
RHT1975
TPM_sc_old.txt


title: Old_1957_P2_87

description:
RHT1988
TPM_sc_old.txt


title: Old_1957_P2_69

description:
RHT1970
TPM_sc_old.txt


title: Old_1957_P2_70

description:
RHT1971
TPM_sc_old.txt


title: Old_1957_P2_66

description:
RHT1967
TPM_sc_old.txt


title: Old_1957_P2_65

description:
RHT1966
TPM_sc_old.txt


title: Old_1957_P2_63

description:
RHT1964
TPM_sc_old.txt


title: Old_1957_P2_85

description:
RHT1986
TPM_sc_old.txt


title: Old_1957_P2_67

description:
RHT1968
TPM_sc_old.txt


title: Old_1957_P2_64

description:
RHT1965
TPM_sc_old.txt


title: Old_1957_P2_61

description:
RHT1962
TPM_sc_old.txt


title: Old_1957_P2_62

description:
RHT1963
TPM_sc_old.txt


title: Old_1957_P2_59

description:
RHT1960
TPM_sc_old.txt


title: Old_1957_P2_58

description:
RHT1959
TPM_sc_old.txt


title: Old_1957_P2_57

description:
RHT1958
TPM_sc_old.txt


title: Old_1957_P2_56

description:
RHT1957
TPM_sc_old.txt


title: Old_1957_P2_55

description:
RHT1956
TPM_sc_old.txt


title: Old_1957_P2_60

description:
RHT1961
TPM_sc_old.txt


title: Old_1957_P2_73

description:
RHT1974
TPM_sc_old.txt


title: Old_1957_P2_52

description:
RHT1953
TPM_sc_old.txt


title: Old_1957_P2_50

description:
RHT1951
TPM_sc_old.txt


title: Old_1957_P2_54

description:
RHT1955
TPM_sc_old.txt


title: Old_1957_P2_53

description:
RHT1954
TPM_sc_old.txt


title: Old_1957_P2_68

description:
RHT1969
TPM_sc_old.txt


title: Old_1957_P2_47

description:
RHT1948
TPM_sc_old.txt


title: Old_1957_P2_49

description:
RHT1950
TPM_sc_old.txt


title: Old_1957_P2_51

description:
RHT1952
TPM_sc_old.txt


title: Old_1957_P2_48

description:
RHT1949
TPM_sc_old.txt


title: Old_1957_P2_46

description:
RHT1947
TPM_sc_old.txt


title: Old_1957_P2_43

description:
RHT1944
TPM_sc_old.txt


title: Old_1957_P2_45

description:
RHT1946
TPM_sc_old.txt


title: Old_1957_P2_44

description:
RHT1945
TPM_sc_old.txt


title: Old_1957_P2_41

description:
RHT1941
TPM_sc_old.txt


title: Old_1957_P2_42

description:
RHT1942
TPM_sc_old.txt


title: Old_1957_P2_38

description:
RHT1938
TPM_sc_old.txt


title: Old_1957_P2_36

description:
RHT1936
TPM_sc_old.txt


title: Old_1957_P2_37

description:
RHT1937
TPM_sc_old.txt


title: Old_1957_P2_35

description:
RHT1935
TPM_sc_old.txt


title: Old_1957_P2_34

description:
RHT1934
TPM_sc_old.txt


title: Old_1957_P2_33

description:
RHT1933
TPM_sc_old.txt


title: Old_1957_P2_31

description:
RHT1931
TPM_sc_old.txt


title: Old_1957_P2_32

description:
RHT1932
TPM_sc_old.txt


title: Old_1957_P2_30

description:
RHT1930
TPM_sc_old.txt


title: Old_1957_P2_29

description:
RHT1929
TPM_sc_old.txt


title: Old_1957_P2_27

description:
RHT1927
TPM_sc_old.txt


title: Old_1957_P2_28

description:
RHT1928
TPM_sc_old.txt


title: Old_1957_P2_26

description:
RHT1926
TPM_sc_old.txt


title: Old_1957_P2_25

description:
RHT1925
TPM_sc_old.txt


title: Old_1957_P2_22

description:
RHT1922
TPM_sc_old.txt


title: Old_1957_P2_23

description:
RHT1923
TPM_sc_old.txt


title: Old_1957_P2_21

description:
RHT1921
TPM_sc_old.txt


title: Old_1957_P2_20

description:
RHT1920
TPM_sc_old.txt


title: Old_1957_P2_19

description:
RHT1919
TPM_sc_old.txt


title: Old_1957_P2_15

description:
RHT1915
TPM_sc_old.txt


title: Old_1957_P2_14

description:
RHT1914
TPM_sc_old.txt


title: Old_1957_P2_18

description:
RHT1918
TPM_sc_old.txt


title: Old_1957_P2_16

description:
RHT1916
TPM_sc_old.txt


title: Old_1957_P2_40

description:
RHT1940
TPM_sc_old.txt


title: Old_1957_P2_12

description:
RHT1912
TPM_sc_old.txt


title: Old_1957_P2_11

description:
RHT1911
TPM_sc_old.txt


title: Old_1957_P2_10

description:
RHT1910
TPM_sc_old.txt


title: Old_1957_P2_8

description:
RHT1908
TPM_sc_old.txt


title: Old_1957_P2_9

description:
RHT1909
TPM_sc_old.txt


title: Old_1957_P2_6

description:
RHT1906
TPM_sc_old.txt


title: Old_1957_P2_7

description:
RHT1907
TPM_sc_old.txt


title: Old_1957_P2_5

description:
RHT1905
TPM_sc_old.txt


title: Old_1957_P2_3

description:
RHT1903
TPM_sc_old.txt


title: Old_1957_P2_2

description:
RHT1902
TPM_sc_old.txt


title: Old_1957_P2_24

description:
RHT1924
TPM_sc_old.txt


title: Old_1957_P2_4

description:
RHT1904
TPM_sc_old.txt


title: Old_1957_P1_92

description:
RHT1900
TPM_sc_old.txt


title: Old_1957_P1_91

description:
RHT1899
TPM_sc_old.txt


title: Old_1957_P2_1

description:
RHT1901
TPM_sc_old.txt


title: Old_1957_P2_17

description:
RHT1917
TPM_sc_old.txt


title: Old_1957_P1_88

description:
RHT1896
TPM_sc_old.txt


title: Old_1957_P1_90

description:
RHT1898
TPM_sc_old.txt


title: Old_1957_P1_87

description:
RHT1895
TPM_sc_old.txt


title: Old_1957_P2_13

description:
RHT1913
TPM_sc_old.txt


title: Old_1957_P1_89

description:
RHT1897
TPM_sc_old.txt


title: Old_1957_P2_39

description:
RHT1939
TPM_sc_old.txt


title: Old_1957_P1_85

description:
RHT1893
TPM_sc_old.txt


title: Old_1957_P1_86

description:
RHT1894
TPM_sc_old.txt


title: Old_1957_P1_79

description:
RHT1887
TPM_sc_old.txt


title: Old_1957_P1_82

description:
RHT1890
TPM_sc_old.txt


title: Old_1957_P1_84

description:
RHT1892
TPM_sc_old.txt


title: Old_1957_P1_81

description:
RHT1889
TPM_sc_old.txt


title: Old_1957_P1_83

description:
RHT1891
TPM_sc_old.txt


title: Old_1957_P1_78

description:
RHT1886
TPM_sc_old.txt


title: Old_1957_P1_77

description:
RHT1885
TPM_sc_old.txt


title: Old_1957_P1_80

description:
RHT1888
TPM_sc_old.txt


title: Old_1957_P1_76

description:
RHT1884
TPM_sc_old.txt


title: Old_1957_P1_74

description:
RHT1882
TPM_sc_old.txt


title: Old_1957_P1_75

description:
RHT1883
TPM_sc_old.txt


title: Old_1957_P1_69

description:
RHT1877
TPM_sc_old.txt


title: Old_1957_P1_71

description:
RHT1879
TPM_sc_old.txt


title: Old_1957_P1_70

description:
RHT1878
TPM_sc_old.txt


title: Old_1957_P1_68

description:
RHT1876
TPM_sc_old.txt


title: Old_1957_P1_66

description:
RHT1874
TPM_sc_old.txt


title: Old_1957_P1_67

description:
RHT1875
TPM_sc_old.txt


title: Old_1957_P1_65

description:
RHT1873
TPM_sc_old.txt


title: Old_1957_P1_62

description:
RHT1870
TPM_sc_old.txt


title: Old_1957_P1_63

description:
RHT1871
TPM_sc_old.txt


title: Old_1957_P1_60

description:
RHT1868
TPM_sc_old.txt


title: Old_1957_P1_59

description:
RHT1867
TPM_sc_old.txt


title: Old_1957_P1_58

description:
RHT1866
TPM_sc_old.txt


title: Old_1957_P1_61

description:
RHT1869
TPM_sc_old.txt


title: Old_1957_P1_57

description:
RHT1865
TPM_sc_old.txt


title: Old_1957_P1_56

description:
RHT1864
TPM_sc_old.txt


title: Old_1957_P1_52

description:
RHT1860
TPM_sc_old.txt


title: Old_1957_P1_73

description:
RHT1881
TPM_sc_old.txt


title: Old_1957_P1_72

description:
RHT1880
TPM_sc_old.txt


title: Old_1957_P1_55

description:
RHT1863
TPM_sc_old.txt


title: Old_1957_P1_54

description:
RHT1862
TPM_sc_old.txt


title: Old_1957_P1_53

description:
RHT1861
TPM_sc_old.txt


title: Old_1957_P1_50

description:
RHT1858
TPM_sc_old.txt


title: Old_1957_P1_49

description:
RHT1857
TPM_sc_old.txt


title: Old_1957_P1_47

description:
RHT1854
TPM_sc_old.txt


title: Old_1957_P1_46

description:
RHT1853
TPM_sc_old.txt


title: Old_1957_P1_45

description:
RHT1852
TPM_sc_old.txt


title: Old_1957_P1_48

description:
RHT1856
TPM_sc_old.txt


title: Old_1957_P1_44

description:
RHT1851
TPM_sc_old.txt


title: Old_1957_P1_64

description:
RHT1872
TPM_sc_old.txt


title: Old_1957_P1_40

description:
RHT1847
TPM_sc_old.txt


title: Old_1957_P1_38

description:
RHT1845
TPM_sc_old.txt


title: Old_1957_P1_42

description:
RHT1849
TPM_sc_old.txt


title: Old_1957_P1_43

description:
RHT1850
TPM_sc_old.txt


title: Old_1957_P1_36

description:
RHT1843
TPM_sc_old.txt


title: Old_1957_P1_35

description:
RHT1842
TPM_sc_old.txt


title: Old_1957_P1_33

description:
RHT1840
TPM_sc_old.txt


title: Old_1957_P1_29

description:
RHT1836
TPM_sc_old.txt


title: Old_1957_P1_30

description:
RHT1837
TPM_sc_old.txt


title: Old_1957_P1_34

description:
RHT1841
TPM_sc_old.txt


title: Old_1957_P1_31

description:
RHT1838
TPM_sc_old.txt


title: Old_1957_P1_28

description:
RHT1834
TPM_sc_old.txt


title: Old_1957_P1_25

description:
RHT1831
TPM_sc_old.txt


title: Old_1957_P1_39

description:
RHT1846
TPM_sc_old.txt


title: Old_1957_P1_22

description:
RHT1828
TPM_sc_old.txt


title: Old_1957_P1_21

description:
RHT1827
TPM_sc_old.txt


title: Old_1957_P1_27

description:
RHT1833
TPM_sc_old.txt


title: Old_1957_P1_32

description:
RHT1839
TPM_sc_old.txt


title: Old_1957_P1_24

description:
RHT1830
TPM_sc_old.txt


title: Old_1957_P1_18

description:
RHT1824
TPM_sc_old.txt


title: Old_1957_P1_19

description:
RHT1825
TPM_sc_old.txt


title: Old_1957_P1_16

description:
RHT1822
TPM_sc_old.txt


title: Old_1957_P1_51

description:
RHT1859
TPM_sc_old.txt


title: Old_1957_P1_23

description:
RHT1829
TPM_sc_old.txt


title: Old_1957_P1_41

description:
RHT1848
TPM_sc_old.txt


title: Old_1957_P1_26

description:
RHT1832
TPM_sc_old.txt


title: Old_1957_P1_15

description:
RHT1821
TPM_sc_old.txt


title: Old_1957_P1_20

description:
RHT1826
TPM_sc_old.txt


title: Old_1957_P1_37

description:
RHT1844
TPM_sc_old.txt


title: Old_1957_P1_14

description:
RHT1820
TPM_sc_old.txt


title: Old_1957_P1_11

description:
RHT1817
TPM_sc_old.txt


title: Old_1957_P1_10

description:
RHT1816
TPM_sc_old.txt


title: Old_1957_P1_13

description:
RHT1819
TPM_sc_old.txt


title: Old_1957_P1_3

description:
RHT1809
TPM_sc_old.txt


title: Old_1957_P1_4

description:
RHT1810
TPM_sc_old.txt


title: Old_1957_P1_5

description:
RHT1811
TPM_sc_old.txt


title: Old_1957_P1_7

description:
RHT1813
TPM_sc_old.txt


title: Old_1957_P1_6

description:
RHT1812
TPM_sc_old.txt


title: Old_1957_P1_9

description:
RHT1815
TPM_sc_old.txt


title: Old_1957_P1_17

description:
RHT1823
TPM_sc_old.txt


title: Old_1957_P1_2

description:
RHT1808
TPM_sc_old.txt


title: Old_1957_P1_1

description:
RHT1807
TPM_sc_old.txt


title: Old_1979_P2_75

description:
RHT1800
TPM_sc_old.txt


title: Old_1979_P2_78

description:
RHT1804
TPM_sc_old.txt


title: Old_1957_P1_8

description:
RHT1814
TPM_sc_old.txt


title: Old_1979_P2_80

description:
RHT1806
TPM_sc_old.txt


title: Old_1979_P2_72

description:
RHT1797
TPM_sc_old.txt


title: Old_1979_P2_76

description:
RHT1801
TPM_sc_old.txt


title: Old_1979_P2_69

description:
RHT1794
TPM_sc_old.txt


title: Old_1979_P2_71

description:
RHT1796
TPM_sc_old.txt


title: Old_1979_P2_79

description:
RHT1805
TPM_sc_old.txt


title: Old_1979_P2_73

description:
RHT1798
TPM_sc_old.txt


title: Old_1979_P2_67

description:
RHT1792
TPM_sc_old.txt


title: Old_1979_P2_70

description:
RHT1795
TPM_sc_old.txt


title: Old_1979_P2_77

description:
RHT1802
TPM_sc_old.txt


title: Old_1979_P2_65

description:
RHT1790
TPM_sc_old.txt


title: Old_1979_P2_66

description:
RHT1791
TPM_sc_old.txt


title: Old_1957_P1_12

description:
RHT1818
TPM_sc_old.txt


title: Old_1979_P2_63

description:
RHT1788
TPM_sc_old.txt


title: Old_1979_P2_62

description:
RHT1787
TPM_sc_old.txt


title: Old_1979_P2_74

description:
RHT1799
TPM_sc_old.txt


title: Old_1979_P2_60

description:
RHT1785
TPM_sc_old.txt


title: Old_1979_P2_61

description:
RHT1786
TPM_sc_old.txt


title: Old_1979_P2_55

description:
RHT1779
TPM_sc_old.txt


title: Old_1979_P2_56

description:
RHT1780
TPM_sc_old.txt


title: Old_1979_P2_59

description:
RHT1784
TPM_sc_old.txt


title: Old_1979_P2_54

description:
RHT1778
TPM_sc_old.txt


title: Old_1979_P2_53

description:
RHT1777
TPM_sc_old.txt


title: Old_1979_P2_49

description:
RHT1773
TPM_sc_old.txt


title: Old_1979_P2_48

description:
RHT1772
TPM_sc_old.txt


title: Old_1979_P2_50

description:
RHT1774
TPM_sc_old.txt


title: Old_1979_P2_64

description:
RHT1789
TPM_sc_old.txt


title: Old_1979_P2_42

description:
RHT1766
TPM_sc_old.txt


title: Old_1979_P2_46

description:
RHT1770
TPM_sc_old.txt


title: Old_1979_P2_41

description:
RHT1765
TPM_sc_old.txt


title: Old_1979_P2_52

description:
RHT1776
TPM_sc_old.txt


title: Old_1979_P2_45

description:
RHT1769
TPM_sc_old.txt


title: Old_1979_P2_44

description:
RHT1768
TPM_sc_old.txt


title: Old_1979_P2_39

description:
RHT1763
TPM_sc_old.txt


title: Old_1979_P2_43

description:
RHT1767
TPM_sc_old.txt


title: Old_1979_P2_38

description:
RHT1762
TPM_sc_old.txt


title: Old_1979_P2_51

description:
RHT1775
TPM_sc_old.txt


title: Old_1979_P2_47

description:
RHT1771
TPM_sc_old.txt


title: Old_1979_P2_35

description:
RHT1759
TPM_sc_old.txt


title: Old_1979_P2_57

description:
RHT1782
TPM_sc_old.txt


title: Old_1979_P2_68

description:
RHT1793
TPM_sc_old.txt


title: Old_1979_P2_32

description:
RHT1756
TPM_sc_old.txt


title: Old_1979_P2_37

description:
RHT1761
TPM_sc_old.txt


title: Old_1979_P2_30

description:
RHT1753
TPM_sc_old.txt


title: Old_1979_P2_31

description:
RHT1754
TPM_sc_old.txt


title: Old_1979_P2_34

description:
RHT1758
TPM_sc_old.txt


title: Old_1979_P2_28

description:
RHT1751
TPM_sc_old.txt


title: Old_1979_P2_29

description:
RHT1752
TPM_sc_old.txt


title: Old_1979_P2_27

description:
RHT1750
TPM_sc_old.txt


title: Old_1979_P2_33

description:
RHT1757
TPM_sc_old.txt


title: Old_1979_P2_40

description:
RHT1764
TPM_sc_old.txt


title: Old_1979_P2_24

description:
RHT1746
TPM_sc_old.txt


title: Old_1979_P2_25

description:
RHT1747
TPM_sc_old.txt


title: Old_1979_P2_21

description:
RHT1743
TPM_sc_old.txt


title: Old_1979_P2_22

description:
RHT1744
TPM_sc_old.txt


title: Old_1979_P2_19

description:
RHT1740
TPM_sc_old.txt


title: Old_1979_P2_36

description:
RHT1760
TPM_sc_old.txt


title: Old_1979_P2_16

description:
RHT1737
TPM_sc_old.txt


title: Old_1979_P2_23

description:
RHT1745
TPM_sc_old.txt


title: Old_1979_P2_26

description:
RHT1748
TPM_sc_old.txt


title: Old_1979_P2_20

description:
RHT1742
TPM_sc_old.txt


title: Old_1979_P2_14

description:
RHT1735
TPM_sc_old.txt


title: Old_1979_P2_15

description:
RHT1736
TPM_sc_old.txt


title: Old_1979_P2_11

description:
RHH5159
TPM_sc_old.txt


title: Old_1979_P2_10

description:
RHH5158
TPM_sc_old.txt


title: Old_1979_P2_12

description:
RHT1732
TPM_sc_old.txt


title: Old_1979_P2_9

description:
RHH5157
TPM_sc_old.txt


title: Old_1979_P2_13

description:
RHT1733
TPM_sc_old.txt


title: Old_1979_P2_8

description:
RHH5156
TPM_sc_old.txt


title: Old_1979_P2_6

description:
RHH5154
TPM_sc_old.txt


title: Old_1979_P2_7

description:
RHH5155
TPM_sc_old.txt


title: Old_1979_P2_3

description:
RHH5151
TPM_sc_old.txt


title: Old_1979_P2_5

description:
RHH5153
TPM_sc_old.txt


title: Old_1979_P2_4

description:
RHH5152
TPM_sc_old.txt


title: Old_1979_P1_86

description:
RHH5147
TPM_sc_old.txt


title: Old_1979_P2_17

description:
RHT1738
TPM_sc_old.txt


title: Old_1979_P1_83

description:
RHH5144
TPM_sc_old.txt


title: Old_1979_P1_82

description:
RHH5143
TPM_sc_old.txt


title: Old_1979_P1_84

description:
RHH5145
TPM_sc_old.txt


title: Old_1979_P1_85

description:
RHH5146
TPM_sc_old.txt


title: Old_1979_P1_76

description:
RHT1724
TPM_sc_old.txt


title: Old_1979_P1_75

description:
RHT1723
TPM_sc_old.txt


title: Old_1979_P1_79

description:
RHT1728
TPM_sc_old.txt


title: Old_1979_P1_78

description:
RHT1726
TPM_sc_old.txt


title: Old_1979_P1_77

description:
RHT1725
TPM_sc_old.txt


title: Old_1979_P1_73

description:
RHT1721
TPM_sc_old.txt


title: Old_1979_P1_74

description:
RHT1722
TPM_sc_old.txt


title: Old_1979_P1_71

description:
RHT1719
TPM_sc_old.txt


title: Old_1979_P1_70

description:
RHT1717
TPM_sc_old.txt


title: Old_1979_P1_69

description:
RHT1716
TPM_sc_old.txt


title: Old_1979_P2_2

description:
RHH5149
TPM_sc_old.txt


title: Old_1979_P2_1

description:
RHH5148
TPM_sc_old.txt


title: Old_1979_P1_68

description:
RHT1715
TPM_sc_old.txt


title: Old_1979_P2_18

description:
RHT1739
TPM_sc_old.txt


title: Old_1979_P1_65

description:
RHT1712
TPM_sc_old.txt


title: Old_1979_P1_66

description:
RHT1713
TPM_sc_old.txt


title: Old_1979_P1_62

description:
RHT1709
TPM_sc_old.txt


title: Old_1979_P1_63

description:
RHT1710
TPM_sc_old.txt


title: Old_1979_P1_64

description:
RHT1711
TPM_sc_old.txt


title: Old_1979_P1_80

description:
RHT1729
TPM_sc_old.txt


title: Old_1979_P1_81

description:
RHT1730
TPM_sc_old.txt


title: Old_1979_P1_59

description:
RHT1706
TPM_sc_old.txt


title: Old_1979_P1_60

description:
RHT1707
TPM_sc_old.txt


title: Old_1979_P1_56

description:
RHT1703
TPM_sc_old.txt


title: Old_1979_P1_58

description:
RHT1705
TPM_sc_old.txt


title: Old_1979_P2_58

description:
RHT1783
TPM_sc_old.txt


title: Old_1979_P1_57

description:
RHT1704
TPM_sc_old.txt


title: Old_1979_P1_51

description:
RHT1698
TPM_sc_old.txt


title: Old_1979_P1_72

description:
RHT1720
TPM_sc_old.txt


title: Old_1979_P1_55

description:
RHT1702
TPM_sc_old.txt


title: Old_1979_P1_52

description:
RHT1699
TPM_sc_old.txt


title: Old_1979_P1_54

description:
RHT1701
TPM_sc_old.txt


title: Old_1979_P1_53

description:
RHT1700
TPM_sc_old.txt


title: Old_1979_P1_49

description:
RHT1695
TPM_sc_old.txt


title: Old_1979_P1_48

description:
RHT1694
TPM_sc_old.txt


title: Old_1979_P1_47

description:
RHT1693
TPM_sc_old.txt


title: Old_1979_P1_67

description:
RHT1714
TPM_sc_old.txt


title: Old_1979_P1_46

description:
RHT1692
TPM_sc_old.txt


title: Old_1979_P1_43

description:
RHT1688
TPM_sc_old.txt


title: Old_1979_P1_61

description:
RHT1708
TPM_sc_old.txt


title: Old_1979_P1_42

description:
RHT1687
TPM_sc_old.txt


title: Old_1979_P1_44

description:
RHT1689
TPM_sc_old.txt


title: Old_1979_P1_38

description:
RHT1683
TPM_sc_old.txt


title: Old_1979_P1_39

description:
RHT1684
TPM_sc_old.txt


title: Old_1979_P1_41

description:
RHT1686
TPM_sc_old.txt


title: Old_1979_P1_40

description:
RHT1685
TPM_sc_old.txt


title: Old_1979_P1_45

description:
RHT1691
TPM_sc_old.txt


title: Old_1979_P1_36

description:
RHT1681
TPM_sc_old.txt


title: Old_1979_P1_35

description:
RHT1680
TPM_sc_old.txt


title: Old_1979_P1_34

description:
RHT1679
TPM_sc_old.txt


title: Old_1979_P1_33

description:
RHT1678
TPM_sc_old.txt


title: Old_1979_P1_32

description:
RHT1677
TPM_sc_old.txt


title: Old_1979_P1_50

description:
RHT1696
TPM_sc_old.txt


title: Old_1979_P1_30

description:
RHT1674
TPM_sc_old.txt


title: Old_1979_P1_37

description:
RHT1682
TPM_sc_old.txt


title: Old_1979_P1_27

description:
RHT1671
TPM_sc_old.txt


title: Old_1979_P1_29

description:
RHT1673
TPM_sc_old.txt


title: Old_1979_P1_31

description:
RHT1675
TPM_sc_old.txt


title: Old_1979_P1_28

description:
RHT1672
TPM_sc_old.txt


title: Old_1979_P1_25

description:
RHT1669
TPM_sc_old.txt


title: Old_1979_P1_22

description:
RHT1666
TPM_sc_old.txt


title: Old_1979_P1_18

description:
RHT1662
TPM_sc_old.txt


title: Old_1979_P1_21

description:
RHT1665
TPM_sc_old.txt


title: Old_1979_P1_17

description:
RHT1661
TPM_sc_old.txt


title: Old_1979_P1_24

description:
RHT1668
TPM_sc_old.txt


title: Old_1979_P1_14

description:
RHT1658
TPM_sc_old.txt


title: Old_1979_P1_20

description:
RHT1664
TPM_sc_old.txt


title: Old_1979_P1_19

description:
RHT1663
TPM_sc_old.txt


title: Old_1979_P1_16

description:
RHT1660
TPM_sc_old.txt


title: Old_1979_P1_11

description:
RHT1655
TPM_sc_old.txt


title: Old_1979_P1_15

description:
RHT1659
TPM_sc_old.txt


title: Old_1979_P1_13

description:
RHT1657
TPM_sc_old.txt


title: Old_1979_P1_8

description:
RHT1651
TPM_sc_old.txt


title: Old_1979_P1_10

description:
RHT1654
TPM_sc_old.txt


title: Old_1979_P1_23

description:
RHT1667
TPM_sc_old.txt


title: Old_1979_P1_7

description:
RHT1650
TPM_sc_old.txt


title: Old_1979_P1_5

description:
RHT1648
TPM_sc_old.txt


title: Old_1979_P1_12

description:
RHT1656
TPM_sc_old.txt


title: Old_1979_P1_26

description:
RHT1670
TPM_sc_old.txt


title: Old_1979_P1_9

description:
RHT1653
TPM_sc_old.txt


title: Old_1979_P1_4

description:
RHT1647
TPM_sc_old.txt


title: Old_1979_P1_2

description:
RHT1644
TPM_sc_old.txt


title: Old_1997_P2_89

description:
RHT1441
TPM_sc_old.txt


title: Old_1997_P2_86

description:
RHT1437
TPM_sc_old.txt


title: Old_1997_P2_87

description:
RHT1438
TPM_sc_old.txt


title: Old_1997_P2_88

description:
RHT1440
TPM_sc_old.txt


title: Old_1997_P2_82

description:
RHT1433
TPM_sc_old.txt


title: Old_1997_P2_83

description:
RHT1434
TPM_sc_old.txt


title: Old_1997_P2_84

description:
RHT1435
TPM_sc_old.txt


title: Old_1997_P2_81

description:
RHT1432
TPM_sc_old.txt


title: Old_1997_P2_85

description:
RHT1436
TPM_sc_old.txt


title: Old_1997_P2_75

description:
RHT1425
TPM_sc_old.txt


title: Old_1997_P2_80

description:
RHT1431
TPM_sc_old.txt


title: Old_1979_P1_6

description:
RHT1649
TPM_sc_old.txt


title: Old_1997_P2_79

description:
RHT1430
TPM_sc_old.txt


title: Old_1997_P2_77

description:
RHT1428
TPM_sc_old.txt


title: Old_1997_P2_78

description:
RHT1429
TPM_sc_old.txt


title: Old_1979_P1_3

description:
RHT1646
TPM_sc_old.txt


title: Old_1979_P1_1

description:
RHT1643
TPM_sc_old.txt


title: Old_1997_P2_69

description:
RHT1419
TPM_sc_old.txt


title: Old_1997_P2_73

description:
RHT1423
TPM_sc_old.txt


title: Old_1997_P2_70

description:
RHT1420
TPM_sc_old.txt


title: Old_1997_P2_72

description:
RHT1422
TPM_sc_old.txt


title: Old_1997_P2_68

description:
RHT1418
TPM_sc_old.txt


title: Old_1997_P2_71

description:
RHT1421
TPM_sc_old.txt


title: Old_1997_P2_67

description:
RHT1417
TPM_sc_old.txt


title: Old_1997_P2_65

description:
RHT1415
TPM_sc_old.txt


title: Old_1997_P2_66

description:
RHT1416
TPM_sc_old.txt


title: Old_1997_P2_63

description:
RHT1413
TPM_sc_old.txt


title: Old_1997_P2_64

description:
RHT1414
TPM_sc_old.txt


title: Old_1997_P2_62

description:
RHT1412
TPM_sc_old.txt


title: Old_1997_P2_59

description:
RHT1409
TPM_sc_old.txt


title: Old_1997_P2_61

description:
RHT1411
TPM_sc_old.txt


title: Old_1997_P2_58

description:
RHT1408
TPM_sc_old.txt


title: Old_1997_P2_76

description:
RHT1427
TPM_sc_old.txt


title: Old_1997_P2_56

description:
RHT1406
TPM_sc_old.txt


title: Old_1997_P2_57

description:
RHT1407
TPM_sc_old.txt


title: Old_1997_P2_55

description:
RHT1405
TPM_sc_old.txt


title: Old_1997_P2_60

description:
RHT1410
TPM_sc_old.txt


title: Old_1997_P2_53

description:
RHT1403
TPM_sc_old.txt


title: Old_1997_P2_74

description:
RHT1424
TPM_sc_old.txt


title: Old_1997_P2_50

description:
RHT1400
TPM_sc_old.txt


title: Old_1997_P2_49

description:
RHT1399
TPM_sc_old.txt


title: Old_1997_P2_51

description:
RHT1401
TPM_sc_old.txt


title: Old_1997_P2_52

description:
RHT1402
TPM_sc_old.txt


title: Old_1997_P2_46

description:
RHT1396
TPM_sc_old.txt


title: Old_1997_P2_47

description:
RHT1397
TPM_sc_old.txt


title: Old_1997_P2_45

description:
RHT1395
TPM_sc_old.txt


title: Old_1997_P2_41

description:
RHT1391
TPM_sc_old.txt


title: Old_1997_P2_38

description:
RHT1388
TPM_sc_old.txt


title: Old_1997_P2_37

description:
RHT1387
TPM_sc_old.txt


title: Old_1997_P2_39

description:
RHT1389
TPM_sc_old.txt


title: Old_1997_P2_43

description:
RHT1393
TPM_sc_old.txt


title: Old_1997_P2_44

description:
RHT1394
TPM_sc_old.txt


title: Old_1997_P2_42

description:
RHT1392
TPM_sc_old.txt


title: Old_1997_P2_35

description:
RHT1385
TPM_sc_old.txt


title: Old_1997_P2_34

description:
RHT1384
TPM_sc_old.txt


title: Old_1997_P2_28

description:
RHT1378
TPM_sc_old.txt


title: Old_1997_P2_31

description:
RHT1381
TPM_sc_old.txt


title: Old_1997_P2_54

description:
RHT1404
TPM_sc_old.txt


title: Old_1997_P2_27

description:
RHT1377
TPM_sc_old.txt


title: Old_1997_P2_26

description:
RHT1376
TPM_sc_old.txt


title: Old_1997_P2_29

description:
RHT1379
TPM_sc_old.txt


title: Old_1997_P2_48

description:
RHT1398
TPM_sc_old.txt


title: Old_1997_P2_25

description:
RHT1375
TPM_sc_old.txt


title: Old_1997_P2_40

description:
RHT1390
TPM_sc_old.txt


title: Old_1997_P2_23

description:
RHT1373
TPM_sc_old.txt


title: Old_1997_P2_20

description:
RHT1370
TPM_sc_old.txt


title: Old_1997_P2_30

description:
RHT1380
TPM_sc_old.txt


title: Old_1997_P2_21

description:
RHT1371
TPM_sc_old.txt


title: Old_1997_P2_24

description:
RHT1374
TPM_sc_old.txt


title: Old_1997_P2_17

description:
RHT1366
TPM_sc_old.txt


title: Old_1997_P2_36

description:
RHT1386
TPM_sc_old.txt


title: Old_1997_P2_19

description:
RHT1369
TPM_sc_old.txt


title: Old_1997_P2_18

description:
RHT1368
TPM_sc_old.txt


title: Old_1997_P2_16

description:
RHT1365
TPM_sc_old.txt


title: Old_1997_P2_22

description:
RHT1372
TPM_sc_old.txt


title: Old_1997_P2_12

description:
RHT1361
TPM_sc_old.txt


title: Old_1997_P2_15

description:
RHT1364
TPM_sc_old.txt


title: Old_1997_P2_14

description:
RHT1363
TPM_sc_old.txt


title: Old_1997_P2_11

description:
RHT1360
TPM_sc_old.txt


title: Old_1997_P2_13

description:
RHT1362
TPM_sc_old.txt


title: Old_1997_P2_10

description:
RHT1359
TPM_sc_old.txt


title: Old_1997_P2_33

description:
RHT1383
TPM_sc_old.txt


title: Old_1997_P2_9

description:
RHT1358
TPM_sc_old.txt


title: Old_1997_P2_8

description:
RHT1357
TPM_sc_old.txt


title: Old_1997_P2_7

description:
RHT1356
TPM_sc_old.txt


title: Old_1997_P2_5

description:
RHT1354
TPM_sc_old.txt


title: Old_1997_P2_6

description:
RHT1355
TPM_sc_old.txt


title: Old_1997_P1_94

description:
RHT1348
TPM_sc_old.txt


title: Old_1997_P1_93

description:
RHT1347
TPM_sc_old.txt


title: Old_1997_P2_2

description:
RHT1351
TPM_sc_old.txt


title: Old_1997_P1_95

description:
RHT1349
TPM_sc_old.txt


title: Old_1997_P2_1

description:
RHT1350
TPM_sc_old.txt


title: Old_1997_P1_90

description:
RHT1344
TPM_sc_old.txt


title: Old_1997_P1_91

description:
RHT1345
TPM_sc_old.txt


title: Old_1997_P1_92

description:
RHT1346
TPM_sc_old.txt


title: Old_1997_P1_89

description:
RHT1343
TPM_sc_old.txt


title: Old_1997_P1_87

description:
RHT1341
TPM_sc_old.txt


title: Old_1997_P1_86

description:
RHT1340
TPM_sc_old.txt


title: Old_1997_P1_85

description:
RHT1339
TPM_sc_old.txt


title: Old_1997_P1_83

description:
RHT1337
TPM_sc_old.txt


title: Old_1997_P1_88

description:
RHT1342
TPM_sc_old.txt


title: Old_1997_P1_82

description:
RHT1336
TPM_sc_old.txt


title: Old_1997_P1_81

description:
RHT1335
TPM_sc_old.txt


title: Old_1997_P1_80

description:
RHT1334
TPM_sc_old.txt


title: Old_1997_P1_84

description:
RHT1338
TPM_sc_old.txt


title: Old_1997_P1_79

description:
RHT1333
TPM_sc_old.txt


title: Old_1997_P2_4

description:
RHT1353
TPM_sc_old.txt


title: Old_1997_P1_76

description:
RHT1330
TPM_sc_old.txt


title: Old_1997_P1_75

description:
RHT1329
TPM_sc_old.txt


title: Old_1997_P1_78

description:
RHT1332
TPM_sc_old.txt


title: Old_1997_P1_77

description:
RHT1331
TPM_sc_old.txt


title: Old_1997_P1_74

description:
RHT1328
TPM_sc_old.txt


title: Old_1997_P1_72

description:
RHT1326
TPM_sc_old.txt


title: Old_1997_P1_70

description:
RHT1324
TPM_sc_old.txt


title: Old_1997_P1_69

description:
RHT1323
TPM_sc_old.txt


title: Old_1997_P1_67

description:
RHT1321
TPM_sc_old.txt


title: Old_1997_P1_71

description:
RHT1325
TPM_sc_old.txt


title: Old_1997_P1_64

description:
RHT1318
TPM_sc_old.txt


title: Old_1997_P1_66

description:
RHT1320
TPM_sc_old.txt


title: Old_1997_P1_65

description:
RHT1319
TPM_sc_old.txt


title: Old_1997_P1_62

description:
RHT1316
TPM_sc_old.txt


title: Old_1997_P1_61

description:
RHT1315
TPM_sc_old.txt


title: Old_1997_P1_59

description:
RHT1313
TPM_sc_old.txt


title: Old_1997_P1_60

description:
RHT1314
TPM_sc_old.txt


title: Old_1997_P1_58

description:
RHT1312
TPM_sc_old.txt


title: Old_1997_P1_57

description:
RHT1311
TPM_sc_old.txt


title: Old_1997_P1_56

description:
RHT1310
TPM_sc_old.txt


title: Old_1997_P1_73

description:
RHT1327
TPM_sc_old.txt


title: Old_1997_P1_55

description:
RHT1309
TPM_sc_old.txt


title: Old_1997_P1_53

description:
RHT1307
TPM_sc_old.txt


title: Old_1997_P1_51

description:
RHT1305
TPM_sc_old.txt


title: Old_1997_P1_50

description:
RHT1304
TPM_sc_old.txt


title: Old_1997_P1_54

description:
RHT1308
TPM_sc_old.txt


title: Old_1997_P1_49

description:
RHT1303
TPM_sc_old.txt


title: Old_1997_P1_46

description:
RHT1300
TPM_sc_old.txt


title: Old_1997_P1_48

description:
RHT1302
TPM_sc_old.txt


title: Old_1997_P1_47

description:
RHT1301
TPM_sc_old.txt


title: Old_1997_P1_63

description:
RHT1317
TPM_sc_old.txt


title: Old_1997_P1_45

description:
RHT1299
TPM_sc_old.txt


title: Old_1997_P1_68

description:
RHT1322
TPM_sc_old.txt


title: Old_1997_P1_44

description:
RHT1298
TPM_sc_old.txt


title: Old_1997_P1_40

description:
RHT1294
TPM_sc_old.txt


title: Old_1997_P1_41

description:
RHT1295
TPM_sc_old.txt


title: Old_1997_P1_38

description:
RHT1292
TPM_sc_old.txt


title: Old_1997_P1_39

description:
RHT1293
TPM_sc_old.txt


title: Old_1997_P1_43

description:
RHT1297
TPM_sc_old.txt


title: Old_1997_P2_32

description:
RHT1382
TPM_sc_old.txt


title: Old_1997_P1_37

description:
RHT1291
TPM_sc_old.txt


title: Old_1997_P1_36

description:
RHT1290
TPM_sc_old.txt


title: Old_1997_P1_35

description:
RHT1289
TPM_sc_old.txt


title: Old_1997_P1_34

description:
RHT1288
TPM_sc_old.txt


title: Old_1997_P1_32

description:
RHT1286
TPM_sc_old.txt


title: Old_1997_P1_33

description:
RHT1287
TPM_sc_old.txt


title: Old_1997_P1_52

description:
RHT1306
TPM_sc_old.txt


title: Old_1997_P1_30

description:
RHT1284
TPM_sc_old.txt


title: Old_1997_P1_31

description:
RHT1285
TPM_sc_old.txt


title: Old_1997_P1_27

description:
RHT1281
TPM_sc_old.txt


title: Old_1997_P1_25

description:
RHT1279
TPM_sc_old.txt


title: Old_1997_P1_24

description:
RHT1278
TPM_sc_old.txt


title: Old_1997_P1_26

description:
RHT1280
TPM_sc_old.txt


title: Old_1997_P1_28

description:
RHT1282
TPM_sc_old.txt


title: Old_1997_P1_23

description:
RHT1277
TPM_sc_old.txt


title: Old_1997_P1_42

description:
RHT1296
TPM_sc_old.txt


title: Old_1997_P1_21

description:
RHT1275
TPM_sc_old.txt


title: Old_1997_P1_20

description:
RHT1274
TPM_sc_old.txt


title: Old_1997_P1_19

description:
RHT1273
TPM_sc_old.txt


title: Old_1997_P1_18

description:
RHT1272
TPM_sc_old.txt


title: Old_1997_P1_29

description:
RHT1283
TPM_sc_old.txt


title: Old_1997_P1_17

description:
RHT1271
TPM_sc_old.txt


title: Old_1997_P1_12

description:
RHT1266
TPM_sc_old.txt


title: Old_1997_P1_11

description:
RHT1265
TPM_sc_old.txt


title: Old_1997_P1_13

description:
RHT1267
TPM_sc_old.txt


title: Old_1997_P1_14

description:
RHT1268
TPM_sc_old.txt


title: Old_1997_P1_16

description:
RHT1270
TPM_sc_old.txt


title: Old_1997_P1_9

description:
RHT1263
TPM_sc_old.txt


title: Old_1997_P1_10

description:
RHT1264
TPM_sc_old.txt


title: Old_1997_P1_6

description:
RHT1260
TPM_sc_old.txt


title: Old_1997_P1_7

description:
RHT1261
TPM_sc_old.txt


title: Old_1997_P1_3

description:
RHT1257
TPM_sc_old.txt


title: Old_1997_P2_3

description:
RHT1352
TPM_sc_old.txt


title: Old_1997_P1_4

description:
RHT1258
TPM_sc_old.txt


title: Old_1997_P1_8

description:
RHT1262
TPM_sc_old.txt


title: Old_1997_P1_5

description:
RHT1259
TPM_sc_old.txt


title: Old_1997_P1_1

description:
RHT1255
TPM_sc_old.txt


title: Young_G486_P2_88

description:
RHD456
TPM_sc_young.txt

value: Young


title: Old_1997_P1_22

description:
RHT1276
TPM_sc_old.txt


title: Young_G486_P2_85

description:
RHD453
TPM_sc_young.txt


title: Young_G486_P2_84

description:
RHD452
TPM_sc_young.txt


title: Old_1997_P1_2

description:
RHT1256
TPM_sc_old.txt


title: Young_G486_P2_82

description:
RHD450
TPM_sc_young.txt


title: Young_G486_P2_86

description:
RHD454
TPM_sc_young.txt


title: Young_G486_P2_83

description:
RHD451
TPM_sc_young.txt


title: Young_G486_P2_81

description:
RHD449
TPM_sc_young.txt


title: Old_1997_P1_15

description:
RHT1269
TPM_sc_old.txt


title: Young_G486_P2_78

description:
RHD446
TPM_sc_young.txt


title: Young_G486_P2_79

description:
RHD447
TPM_sc_young.txt


title: Young_G486_P2_80

description:
RHD448
TPM_sc_young.txt


title: Young_G486_P2_87

description:
RHD455
TPM_sc_young.txt


title: Young_G486_P2_77

description:
RHD445
TPM_sc_young.txt


title: Young_G486_P2_73

description:
RHD441
TPM_sc_young.txt


title: Young_G486_P2_74

description:
RHD442
TPM_sc_young.txt


title: Young_G486_P2_71

description:
RHD439
TPM_sc_young.txt


title: Young_G486_P2_76

description:
RHD444
TPM_sc_young.txt


title: Young_G486_P2_75

description:
RHD443
TPM_sc_young.txt


title: Young_G486_P2_72

description:
RHD440
TPM_sc_young.txt


title: Young_G486_P2_70

description:
RHD438
TPM_sc_young.txt


title: Young_G486_P2_69

description:
RHD437
TPM_sc_young.txt


title: Young_G486_P2_68

description:
RHD436
TPM_sc_young.txt


title: Young_G486_P2_67

description:
RHD435
TPM_sc_young.txt


title: Young_G486_P2_65

description:
RHD433
TPM_sc_young.txt


title: Young_G486_P2_62

description:
RHD430
TPM_sc_young.txt


title: Young_G486_P2_60

description:
RHD428
TPM_sc_young.txt


title: Young_G486_P2_66

description:
RHD434
TPM_sc_young.txt


title: Young_G486_P2_61

description:
RHD429
TPM_sc_young.txt


title: Young_G486_P2_63

description:
RHD431
TPM_sc_young.txt


title: Young_G486_P2_64

description:
RHD432
TPM_sc_young.txt


title: Young_G486_P2_58

description:
RHD426
TPM_sc_young.txt


title: Young_G486_P2_55

description:
RHD423
TPM_sc_young.txt


title: Young_G486_P2_56

description:
RHD424
TPM_sc_young.txt


title: Young_G486_P2_54

description:
RHD422
TPM_sc_young.txt


title: Young_G486_P2_53

description:
RHD421
TPM_sc_young.txt


title: Young_G486_P2_52

description:
RHD420
TPM_sc_young.txt


title: Young_G486_P2_51

description:
RHD419
TPM_sc_young.txt


title: Young_G486_P2_50

description:
RHD418
TPM_sc_young.txt


title: Young_G486_P2_49

description:
RHD417
TPM_sc_young.txt


title: Young_G486_P2_48

description:
RHD416
TPM_sc_young.txt


title: Young_G486_P2_47

description:
RHD415
TPM_sc_young.txt


title: Young_G486_P2_46

description:
RHD414
TPM_sc_young.txt


title: Young_G486_P2_45

description:
RHD413
TPM_sc_young.txt


title: Young_G486_P2_42

description:
RHD410
TPM_sc_young.txt


title: Young_G486_P2_44

description:
RHD412
TPM_sc_young.txt


title: Young_G486_P2_41

description:
RHD409
TPM_sc_young.txt


title: Young_G486_P2_57

description:
RHD425
TPM_sc_young.txt


title: Young_G486_P2_38

description:
RHD406
TPM_sc_young.txt


title: Young_G486_P2_59

description:
RHD427
TPM_sc_young.txt


title: Young_G486_P2_40

description:
RHD408
TPM_sc_young.txt


title: Young_G486_P2_37

description:
RHD405
TPM_sc_young.txt


title: Young_G486_P2_36

description:
RHD404
TPM_sc_young.txt


title: Young_G486_P2_34

description:
RHD402
TPM_sc_young.txt


title: Young_G486_P2_35

description:
RHD403
TPM_sc_young.txt


title: Young_G486_P2_33

description:
RHD401
TPM_sc_young.txt


title: Young_G486_P2_43

description:
RHD411
TPM_sc_young.txt


title: Young_G486_P2_32

description:
RHD400
TPM_sc_young.txt


title: Young_G486_P2_30

description:
RHD398
TPM_sc_young.txt


title: Young_G486_P2_26

description:
RHD394
TPM_sc_young.txt


title: Young_G486_P2_28

description:
RHD396
TPM_sc_young.txt


title: Young_G486_P2_31

description:
RHD399
TPM_sc_young.txt


title: Young_G486_P2_21

description:
RHT2303
TPM_sc_young.txt


title: Young_G486_P2_24

description:
RHT2306
TPM_sc_young.txt


title: Young_G486_P2_25

description:
RHT2307
TPM_sc_young.txt


title: Young_G486_P2_18

description:
RHT2299
TPM_sc_young.txt


title: Young_G486_P2_19

description:
RHT2301
TPM_sc_young.txt


title: Young_G486_P2_22

description:
RHT2304
TPM_sc_young.txt


title: Young_G486_P2_20

description:
RHT2302
TPM_sc_young.txt


title: Young_G486_P2_39

description:
RHD407
TPM_sc_young.txt


title: Young_G486_P2_17

description:
RHT2298
TPM_sc_young.txt


title: Young_G486_P2_14

description:
RHT2295
TPM_sc_young.txt


title: Young_G486_P2_15

description:
RHT2296
TPM_sc_young.txt


title: Young_G486_P2_13

description:
RHT2294
TPM_sc_young.txt


title: Young_G486_P2_29

description:
RHD397
TPM_sc_young.txt


title: Young_G486_P2_12

description:
RHT2293
TPM_sc_young.txt


title: Young_G486_P2_27

description:
RHD395
TPM_sc_young.txt


title: Young_G486_P2_11

description:
RHT2292
TPM_sc_young.txt


title: Young_G486_P2_23

description:
RHT2305
TPM_sc_young.txt


title: Young_G486_P2_8

description:
RHT2289
TPM_sc_young.txt


title: Young_G486_P2_9

description:
RHT2290
TPM_sc_young.txt


title: Young_G486_P2_7

description:
RHT2288
TPM_sc_young.txt


title: Young_G486_P2_10

description:
RHT2291
TPM_sc_young.txt


title: Young_G486_P2_6

description:
RHT2287
TPM_sc_young.txt


title: Young_G486_P2_3

description:
RHT2284
TPM_sc_young.txt


title: Young_G486_P2_5

description:
RHT2286
TPM_sc_young.txt


title: Young_G486_P2_4

description:
RHT2285
TPM_sc_young.txt


title: Young_G486_P2_16

description:
RHT2297
TPM_sc_young.txt


title: Young_G486_P2_2

description:
RHT2283
TPM_sc_young.txt


title: Young_G486_P2_1

description:
RHT2282
TPM_sc_young.txt


title: Young_G486_P1_93

description:
RHT2281
TPM_sc_young.txt


title: Young_G486_P1_91

description:
RHT2279
TPM_sc_young.txt


title: Young_G486_P1_89

description:
RHT2277
TPM_sc_young.txt


title: Young_G486_P1_88

description:
RHT2276
TPM_sc_young.txt


title: Young_G486_P1_87

description:
RHT2275
TPM_sc_young.txt


title: Young_G486_P1_85

description:
RHT2273
TPM_sc_young.txt


title: Young_G486_P1_83

description:
RHT2271
TPM_sc_young.txt


title: Young_G486_P1_86

description:
RHT2274
TPM_sc_young.txt


title: Young_G486_P1_90

description:
RHT2278
TPM_sc_young.txt


title: Young_G486_P1_84

description:
RHT2272
TPM_sc_young.txt


title: Young_G486_P1_80

description:
RHT2268
TPM_sc_young.txt


title: Young_G486_P1_82

description:
RHT2270
TPM_sc_young.txt


title: Young_G486_P1_79

description:
RHT2267
TPM_sc_young.txt


title: Young_G486_P1_75

description:
RHT2263
TPM_sc_young.txt


title: Young_G486_P1_81

description:
RHT2269
TPM_sc_young.txt


title: Young_G486_P1_77

description:
RHT2265
TPM_sc_young.txt


title: Young_G486_P1_74

description:
RHT2262
TPM_sc_young.txt


title: Young_G486_P1_78

description:
RHT2266
TPM_sc_young.txt


title: Young_G486_P1_76

description:
RHT2264
TPM_sc_young.txt


title: Young_G486_P1_72

description:
RHT2260
TPM_sc_young.txt


title: Young_G486_P1_73

description:
RHT2261
TPM_sc_young.txt


title: Young_G486_P1_92

description:
RHT2280
TPM_sc_young.txt


title: Young_G486_P1_71

description:
RHT2259
TPM_sc_young.txt


title: Young_G486_P1_70

description:
RHT2258
TPM_sc_young.txt


title: Young_G486_P1_66

description:
RHT2253
TPM_sc_young.txt


title: Young_G486_P1_65

description:
RHT2252
TPM_sc_young.txt


title: Young_G486_P1_68

description:
RHT2256
TPM_sc_young.txt


title: Young_G486_P1_67

description:
RHT2255
TPM_sc_young.txt


title: Young_G486_P1_64

description:
RHT2251
TPM_sc_young.txt


title: Young_G486_P1_62

description:
RHT2249
TPM_sc_young.txt


title: Young_G486_P1_63

description:
RHT2250
TPM_sc_young.txt


title: Young_G486_P1_61

description:
RHT2248
TPM_sc_young.txt


title: Young_G486_P1_59

description:
RHT2246
TPM_sc_young.txt


title: Young_G486_P1_57

description:
RHT2244
TPM_sc_young.txt


title: Young_G486_P1_58

description:
RHT2245
TPM_sc_young.txt


title: Young_G486_P1_56

description:
RHT2243
TPM_sc_young.txt


title: Young_G486_P1_55

description:
RHT2242
TPM_sc_young.txt


title: Young_G486_P1_54

description:
RHT2241
TPM_sc_young.txt


title: Young_G486_P1_53

description:
RHT2240
TPM_sc_young.txt


title: Young_G486_P1_69

description:
RHT2257
TPM_sc_young.txt


title: Young_G486_P1_50

description:
RHT2237
TPM_sc_young.txt


title: Young_G486_P1_52

description:
RHT2239
TPM_sc_young.txt


title: Young_G486_P1_49

description:
RHT2236
TPM_sc_young.txt


title: Young_G486_P1_48

description:
RHT2235
TPM_sc_young.txt


title: Young_G486_P1_60

description:
RHT2247
TPM_sc_young.txt


title: Young_G486_P1_45

description:
RHT2231
TPM_sc_young.txt


title: Young_G486_P1_44

description:
RHT2230
TPM_sc_young.txt


title: Young_G486_P1_46

description:
RHT2233
TPM_sc_young.txt


title: Young_G486_P1_43

description:
RHT2229
TPM_sc_young.txt


title: Young_G486_P1_42

description:
RHT2228
TPM_sc_young.txt


title: Young_G486_P1_51

description:
RHT2238
TPM_sc_young.txt


title: Young_G486_P1_40

description:
RHT2226
TPM_sc_young.txt


title: Young_G486_P1_39

description:
RHT2225
TPM_sc_young.txt


title: Young_G486_P1_47

description:
RHT2234
TPM_sc_young.txt


title: Young_G486_P1_38

description:
RHT2224
TPM_sc_young.txt


title: Young_G486_P1_36

description:
RHT2222
TPM_sc_young.txt


title: Young_G486_P1_41

description:
RHT2227
TPM_sc_young.txt


title: Young_G486_P1_35

description:
RHT2221
TPM_sc_young.txt


title: Young_G486_P1_34

description:
RHT2220
TPM_sc_young.txt


title: Young_G486_P1_33

description:
RHT2219
TPM_sc_young.txt


title: Young_G486_P1_32

description:
RHT2218
TPM_sc_young.txt


title: Young_G486_P1_37

description:
RHT2223
TPM_sc_young.txt


title: Young_G486_P1_30

description:
RHT2216
TPM_sc_young.txt


title: Young_G486_P1_29

description:
RHT2215
TPM_sc_young.txt


title: Young_G486_P1_28

description:
RHT2214
TPM_sc_young.txt


title: Young_G486_P1_31

description:
RHT2217
TPM_sc_young.txt


title: Young_G486_P1_27

description:
RHT2213
TPM_sc_young.txt


title: blood_patient_3466.1

city: Wuerzburg

first: Tobias

last: Mueller

address: Am Hubland

country: Germany

institute: University of Wuerzburg

description:
202081130160_R07C01_Grn.idat
202081130160_R07C01_Red.idat
T+3466.1F

hyb_protocol: bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium MethylationEPIC BeadChip using standard Illumina protocol

scan_protocol: Arrays were imaged using the Illumina iScan

data_processing:
Data were analyzed with the R package minfi included in the Bioconductor framework.
Data filtering: We dropped loci with SNPs and all sites located on chromosome X and Y. The raw signal was normalized by the quantile normalization as implemented in the minfi package.

label: Cy5 and Cy3

extract_protocol: Genomic DNA was isolated immediately after collecting the blood by using the FlexiGene DNA Kit (Qiagen, Hilden, Germany) according to the provided manual.

value: blood

tag: gender

value: female

tag: disease state

value: trisomy 21

tag: cognition state

value: IQ+


title: blood_control_22

description:
202081130160_R06C01_Grn.idat
202081130160_R06C01_Red.idat
CTM22

value: male

value: control

value: high


title: blood_control_13

description:
202081130160_R04C01_Grn.idat
202081130160_R04C01_Red.idat
CTF13


title: blood_control_29

description:
202081130160_R08C01_Grn.idat
202081130160_R08C01_Red.idat
CTF29


title: blood_control_31

description:
202081130127_R08C01_Grn.idat
202081130127_R08C01_Red.idat
CTF31


title: blood_patient_1755.1

description:
202081130127_R04C01_Grn.idat
202081130127_R04C01_Red.idat
T+1755.1M


title: Young_G486_P1_26

description:
RHT2212
TPM_sc_young.txt


title: blood_control_19

description:
202081130127_R06C01_Grn.idat
202081130127_R06C01_Red.idat
CTM19


title: Young_G486_P1_25

description:
RHT2211
TPM_sc_young.txt


title: blood_patient_3628.1

description:
202081130160_R02C01_Grn.idat
202081130160_R02C01_Red.idat
T+3628.1M


title: blood_control_30

description:
202081130160_R03C01_Grn.idat
202081130160_R03C01_Red.idat
CTM30


title: blood_control_2

description:
202081130127_R07C01_Grn.idat
202081130127_R07C01_Red.idat
CTM2


title: blood_patient_3298.1

description:
202081130160_R05C01_Grn.idat
202081130160_R05C01_Red.idat
T-3298.1M

value: IQ-


title: blood_control_32

description:
202081130160_R01C01_Grn.idat
202081130160_R01C01_Red.idat
CTF32


title: Young_G486_P1_23

description:
RHT2209
TPM_sc_young.txt


title: blood_patient_4641.1

description:
202081130127_R01C01_Grn.idat
202081130127_R01C01_Red.idat
T+4641.1F


title: blood_control_16

description:
202081130127_R05C01_Grn.idat
202081130127_R05C01_Red.idat
CTF16


title: ein2/jar1_Mp_48h_rep 1

city: Riverside

first: Thomas

last: Eulgem

state: California

address: Genomics 3234A

department: Botany and Plant Sciences

institute: University of California, Riverside

data_processing:
Reads that passed Illumina's quality control filters were further processed. The quality of sequencing reads was assessed using FastQC v 0.11.5 (http://www.bioinformatics.babraham.ac.uk/projects/fastqc/).
Unique reads were mapped to the Arabidopsis genome (TAIR10) using STAR v 2.5.3a with default settings and a known splice site file, built from Araport annotation file v11. Reads in gene regions were counted using featureCounts.
The expression fold‐change of each gene was calculated using the R package DESeq2 v1.14.1 with the threshold for differentially expressed genes set to p value < 0.05.
Genome_build: Arabidopsis genome (TAIR10)
Supplementary_files_format_and_content: Tab-delimited text files include values for each Sample

organism: Arabidopsis thaliana

growth_protocol: Seeds were sown and seedlings were grown on agar plates (½ MS (Murashige and Skoog), 0.05% MES, 0.25% sucrose, 0.87% agar; pH 5.7) in growth room conditions (16-h day, 8-h night, 22 °C; 100 μE m-2s-1).

extract_protocol:
Total RNA was isolated from roots using TRIzol (InvitrogenTM, http://www.thermofisher.com) and was processed (74204 QIAGEN, http://www.qiagen.com, and AM1907 InvitrogenTM, http://www.thermofisher.com).
RNA-seq libraries were prepared using the NEBNext Ultra Directional RNA Library Prep Kit for Illumina by following the manufacturer’s instruction (E7490S, E7335S, E7420S, New England Biolabs, http://www.neb.com).

treatment_protocol: 10 day-old seedlings were transferred to agar plates without Mp (untreated) or to Mp-containing infection plates and placed in growth room conditions for 24 or 48 hours.

tag: ecotype background

tag: genotype/variation

tag: treatment

value: Mp infection plate

tag: hours post transfer to plate

value: seedling root


title: ein2/jar1_Mp_24h_rep 2


title: Young_G486_P1_22

description:
RHT2208
TPM_sc_young.txt

value: Naive CD4 T cell


title: ein2/jar1_Mp_48h_rep 2


title: blood_control_17

description:
202081130047_R07C01_Grn.idat
202081130047_R07C01_Red.idat
CTM17


title: blood_control_18

description:
202081130127_R02C01_Grn.idat
202081130127_R02C01_Red.idat
CTM18


title: ein2/jar1_Mp_24h_rep 1


title: Young_G486_P1_20

description:
RHT2206
TPM_sc_young.txt


title: blood_patient_7383.1

description:
202081130047_R04C01_Grn.idat
202081130047_R04C01_Red.idat
T+7383.1F


title: blood_patient_1494.1

description:
202081130047_R05C01_Grn.idat
202081130047_R05C01_Red.idat
T+1494.1M


title: blood_control_28

description:
202081130127_R03C01_Grn.idat
202081130127_R03C01_Red.idat
CTM28


title: Young_G486_P1_19

description:
RHT2205
TPM_sc_young.txt


title: Young_G486_P1_18

description:
RHT2204
TPM_sc_young.txt


title: blood_control_24

description:
202081130046_R07C01_Grn.idat
202081130046_R07C01_Red.idat
CTF24


title: ein2/jar1_24h_rep 2

value: untreated plate


title: ein2/jar1_48h_rep 1


title: blood_control_27

description:
202081130047_R01C01_Grn.idat
202081130047_R01C01_Red.idat
CTF27


title: blood_control_10

description:
202081130047_R02C01_Grn.idat
202081130047_R02C01_Red.idat
CTM10


title: Young_G486_P1_21

description:
RHT2207
TPM_sc_young.txt


title: Young_G486_P1_17

description:
RHT2203
TPM_sc_young.txt


title: ein2/jar1_24h_rep 1


title: Col-0_Mp_48h_rep 2

value: wild type


title: blood_control_4

description:
202081130047_R06C01_Grn.idat
202081130047_R06C01_Red.idat
CTF4


title: Young_G486_P1_15

description:
RHT2201
TPM_sc_young.txt


title: Col-0_Mp_48h_rep 1


title: Young_G486_P1_13

description:
RHT2199
TPM_sc_young.txt


title: Col-0_Mp_24h_rep 2


title: Col-0_Mp_24h_rep 1


title: blood_control_11

description:
202081130047_R03C01_Grn.idat
202081130047_R03C01_Red.idat
CTM11


title: blood_patient_2132.1

description:
202081130046_R08C01_Grn.idat
202081130046_R08C01_Red.idat
T+2132.1F


title: Young_G486_P1_12

description:
RHT2198
TPM_sc_young.txt


title: Young_G486_P1_14

description:
RHT2200
TPM_sc_young.txt


title: blood_patient_829.1

description:
202081130047_R08C01_Grn.idat
202081130047_R08C01_Red.idat
T-829.1M


title: blood_control_8

description:
202081130046_R06C01_Grn.idat
202081130046_R06C01_Red.idat
CTF8


title: ein2/jar1_48h_rep 2


title: blood_control_20

description:
202081130046_R05C01_Grn.idat
202081130046_R05C01_Red.idat
CTM20


title: Young_G486_P1_10

description:
RHT2196
TPM_sc_young.txt


title: Young_G486_P1_11

description:
RHT2197
TPM_sc_young.txt


title: Young_G486_P1_9

description:
RHT2195
TPM_sc_young.txt


title: Col-0_24h_rep 1


title: Col-0_48h_rep 1


title: Young_G486_P1_8

description:
RHT2194
TPM_sc_young.txt


title: Young_G486_P1_6

description:
RHT2192
TPM_sc_young.txt


title: Young_G486_P1_7

description:
RHT2193
TPM_sc_young.txt


title: Col-0_24h_rep 2


title: Young_G486_P1_16

description:
RHT2202
TPM_sc_young.txt


title: Col-0_48h_rep 2


title: Young_G486_P1_2

description:
RHT2188
TPM_sc_young.txt


title: Young_G486_P1_3

description:
RHT2189
TPM_sc_young.txt


title: Young_G486_P1_1

description:
RHT2187
TPM_sc_young.txt


title: Young_G486_P1_5

description:
RHT2191
TPM_sc_young.txt


title: Young_EALL_P2_95

description:
RHT1642
TPM_sc_young.txt

value: EALL


title: Young_EALL_P2_94

description:
RHT1641
TPM_sc_young.txt


title: Young_EALL_P2_93

description:
RHT1640
TPM_sc_young.txt


title: Young_G486_P1_4

description:
RHT2190
TPM_sc_young.txt


title: Young_EALL_P2_91

description:
RHT1638
TPM_sc_young.txt


title: Young_G486_P1_24

description:
RHT2210
TPM_sc_young.txt


title: Young_EALL_P2_90

description:
RHT1637
TPM_sc_young.txt


title: Young_EALL_P2_89

description:
RHT1636
TPM_sc_young.txt


title: Young_EALL_P2_88

description:
RHT1635
TPM_sc_young.txt


title: Young_EALL_P2_87

description:
RHT1634
TPM_sc_young.txt


title: Young_EALL_P2_86

description:
RHT1633
TPM_sc_young.txt


title: Young_EALL_P2_92

description:
RHT1639
TPM_sc_young.txt


title: Young_EALL_P2_85

description:
RHT1632
TPM_sc_young.txt


title: Young_EALL_P2_84

description:
RHT1631
TPM_sc_young.txt


title: Young_EALL_P2_83

description:
RHT1630
TPM_sc_young.txt


title: blood_control_12

description:
202081130046_R04C01_Grn.idat
202081130046_R04C01_Red.idat
CTM12


title: Young_EALL_P2_82

description:
RHT1629
TPM_sc_young.txt


title: ubp8del_input_B

city: Oklahoma City

first: Rafal

last: Donczew

state: OK

address: 825 NE 13th St

department: Cell Cycle and Cancer Biology

institute: Oklahoma Medical Research Foundation

data_processing:
Paired-end sequencing reads were aligned to S. cerevisiae reference genome (sacCer3) and S. pombe reference genome (ASM294v2.20) with Bowtie2  using optional arguments “-I 10 -X 700 --local --very-sensitive-local --no-unal --no-mixed --no-discordant”.
For each base pair in the genome, we counted the number of paired-end fragments aligned over it.
Signal per base pair was normalized by the number of all S. pombe reads mapped for the sample, multiplied by 10000 (arbitrarily chosen number) and multiplied by the ratio of S. pombe to S. cerevisiae reads in the corresponding input sample.
Genome_build: sacCer3 (S. cerevisiae), ASM294v2.20 (S. pombe)
Supplementary_files_format_and_content: Processed data is provided in a wig format and contains normalized signal per base pair.

organism: Saccharomyces cerevisiae

source_name: whole organism

growth_protocol: 30 degrees in synthetic medium to mid-log phase

extract_protocol:
ChIP-seq was performed similarly as described (Rodriguez et al., 2014; PMID:  25271716 ) with following modifications. Zirconia/silica beads were used for bead beating. Chromatin was sonicated for three rounds of 15 min. S. pombe (strain 972h) chromatin used as a spike-in was prepared the same way as S. cerevisiae samples (including cross linking, bead beating and sonication) and kindly supplied by Toshi Tsukiyama. Each IP reaction contained 1 ug of S. cerevisiae chromatin, 10 ng of S. pombe chromatin and 20 ul of Protein G dynabeads (Invitrogen, #10004D) conjugated with 4 ul of anti-H3K18Ac antibody (EMD Milipore, #07-354) and the final volume was brought to 500 ul with FA buffer. 25 ul of the S. cerevisiae/S. pombe chromatin mix was transferred to a separate tube as an ?input? sample before addition of beads and combined with 25 ul of the stop buffer. Chromatin-antibody complexes were eluted with two 25 ul volumes of stop buffer. IP and input samples were processed together from this point. After Proteinase K digestion DNA was purified by phenol extraction (two step extraction for input samples) followed by ethanol precipitation in the presence of 20 ug glycogen. Pelleted DNA was washed with 70% ethanol and resuspended in 15 ul 10 mM Tris-HCl (pH 7.5).
Sequencing libraries were prepared similarly as described (Warfield et al., 2017; PMID: 28918900) with few modifications. 2 ng of DNA was used as an input. Final adapter concentration during ligation was 6.5 nM. 15 cycles were used for library amplification.

tag: strain

tag: genotype

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0  ubp8 delta::KanMx

value: 6 minute RNA labeling with 4-tU

tag: growth


title: ubp8del_input_A

value: 30 degrees in synthetic medium to mid-log phase


title: blood_patient_178.1

description:
202081130046_R03C01_Grn.idat
202081130046_R03C01_Red.idat
T-178.1M

value: blood


title: Young_EALL_P2_81

description:
RHT1628
TPM_sc_young.txt

tag: donorid

tag: plateid

tag: batch

value: Young


title: ubp8del_B


title: ubp8del_A


title: blood_patient_882.1

description:
202081130046_R02C01_Grn.idat
202081130046_R02C01_Red.idat
T+882.1M

value: trisomy 21

tag: age


title: Young_EALL_P2_80

description:
RHT1627
TPM_sc_young.txt

tag: cell type

tag: developmental stage


title: JHU-A90-P4

city: Scottsdale

first: michael

middle: thomas

last: barrett

state: Arizona

address: 13400 east shea boulevard

institute: mayo clinic arizona

description: denosq-90P4ds_20589_S01_CGH_107_Sep09_1_1

hyb_protocol: Labeled DNA was hybridized without ozone scavenger and chips washed according to manufacture's protocol for 40 hours in a rotating 65°C oven.

scan_protocol: All microarray slides were scanned using an Agilent 2565C DNA scanner and the images were analyzed with Agilent Feature Extraction version 11.0 using default settings.

data_processing: Data was extracted from the TIFF files using Agilent FE 11.  The aCGH data was assessed with a series of QC metrics then analyzed using an aberration detection algorithm (ADM2) (Lipson et al., J Comput Biol. 2006 Mar;13(2):215-28). The latter identifies all aberrant intervals in a given sample with consistently high or low log ratios based on the statistical score derived from the average normalized log ratios of all probes in the genomic interval multiplied by the square root of the number of these probes. This score represents the deviation of the average of the normalized log ratios from its expected value of zero and is proportional to the height h (absolute average log ratio) of the genomic interval, and to the square root of the number of probes in the interval.

source_name: Adeosquamous cancer of the pancreas

label_protocol: DNAs from frozen tissue were treated with DNAse 1 prior to Klenow-based labeling. High molecular weight templates were digested for 30 minutes while the smaller fragmented FFPE-derived DNA samples were digested for only 1 minute. In each case 1 ul of 10x DNase 1 reaction buffer and 2 μl of DNase 1 dilution buffer were added to 7 μl of DNA sample and incubated at room temperature then transferred to 70°C for 30 minutes to deactivate DNase 1. Sample and reference templates were then labeled with Cy-5 dUTP and Cy-3 dUTP respectively using a BioPrime labeling kit (Invitrogen, Carlsbad, CA) according to our published protocols (Ruiz, C., et al., Proc Natl Acad Sci U S A, 2011. 108(29): p. 12054-9). All labeling reactions were assessed using a Nanodrop assay (Nanodrop, Wilmington, DE) prior to mixing and hybridization to CGH arrays (Agilent Technologies, Santa Clara, CA).

growth_protocol: Fresh tumor samples from xenografts and patients with adenosquamous cancer of the pancreas (ASCP) were flash-frozen and maintaned at -80 degrees C. Formalin fixed paraffin embedded (FFPE) tissue samples were collected at room temperature.

extract_protocol: Biopsies were minced in the presence of NST buffer and DAPI according to published protocols (Holley et al, 2012). Nuclei were disaggregated then filtered through a 40 μm mesh prior to flow sorting with an Influx cytometer (Becton-Dickinson, San Jose, CA) with ultraviolet excitation and DAPI emission collected at >450 nm. DNA content and cell cycle were analyzed using the software program MultiCycle (Phoenix Flow Systems, San Diego, CA).DNAs were extracted using Qiagen micro kits (Qiagen Valencia, CA).

tag: tissue source

value: Primary tumor

tag: tissue type

value: FFPE tissue

tag: flow sort content

value: Aneuploid

source_name: Reference pooled 46XX

tag: sample type

value: Normal female genome


title: spt7del_input_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 spt7 delta::HPH


title: Young_EALL_P2_79

description:
RHT1626
TPM_sc_young.txt


title: Young_EALL_P2_78

description:
RHT1625
TPM_sc_young.txt


title: JHU-A129-P4

description: PancAdenosq-129-P4ds20590_S01_CGH_107_Sep09_1_1


title: Young_EALL_P2_77

description:
RHT1624
TPM_sc_young.txt


title: spt7del_B


title: Young_EALL_P2_76

description:
RHT1623
TPM_sc_young.txt


title: spt7del_input_A


title: JHU-A53-P4

description: PancAdeSq-53-P4_21329_S01_CGH_107_Sep09_1_1


title: B2013-P3

description: AdeSq-B2013-P3_23759_S01_CGH_107_Sep09_1_2

value: Diploid


title: spt7del_A


title: UNeb-MetLung-P4

value: Lung metastasis rapid autopsy

value: frozen tissue


title: UNeb-MetPerigastric-P3

description: Perigastric-P3_21530_S01_CGH_107_Sep09_1_1

value: Perigastric metastasis rapid autopsy


title: spt3del_input_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 RPB3 - Flag3 ::KanMX spt3 delta::NAT MX


title: Young_EALL_P2_74

description:
RHT1621
TPM_sc_young.txt

value: EALL

value: Naive CD4 T cell


title: spt3del_B

value: 6 minute RNA labeling with 4-tU


title: UNeb-MetLiver-P4

description: UNEB-Liver-P4_21527_S01_CGH_107_Sep09_1_2

value: Liver metastasis rapid autopsy


title: spt3del_A

value: 30 degrees in synthetic medium to mid-log phase


title: Young_EALL_P2_75

description:
RHT1622
TPM_sc_young.txt

value: Young


title: UNeb-MetLung-P3


title: Young_EALL_P2_72

description:
RHT1619
TPM_sc_young.txt


title: gcn5del_input_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 gcn5 delta::KanMx


title: PAX217-F1-P5

description: PAX217F1-AR-P5_27821_S01_CGH_107_Sep09_1_2

value: Patient derived xenograft

value: human tumor


title: gcn5del_input_A


title: PAX208-F2-P4

description: PAX208F2-AR-P4_27822_S01_CGH_107_Sep09_1_1

value: human tumor and mouse host


title: Young_EALL_P2_70

description:
RHT1617
TPM_sc_young.txt


title: Mayo-MS12-23048-P3

description: MS12-23048-P3_22855_S01_CGH_107_Sep09_1_2

value: Primary tumor

value: FFPE tissue

value: Normal female genome


title: Young_EALL_P2_69

description:
RHT1616
TPM_sc_young.txt


title: PAX139-F1-P6

description: PAX139F1-AR-P6_27823_S01_CGH_107_Sep09_1_2


title: UPCC-040-P4

value: Surgical resection

value: Aneuploid


title: gcn5del_A

value: 30 degrees in YPD to mid-log phase


title: UNeb-Primary-P4

description: UNEB-Primary-P4_21527_S01_CGH_107_Sep09_1_1

value: Primary rapid autopsy

value: frozen tissue


title: Young_EALL_P2_68

description:
RHT1615
TPM_sc_young.txt

value: EALL

value: Naive CD4 T cell


title: UNeb-Primary-P3

value: Diploid


title: WT565_input_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 RPB3 - Flag3 ::KanMX

value: 6 minute RNA labeling with 4-tU


title: PAX232-P4


title: PAX265-P4


title: Young_EALL_P2_67

description:
RHT1614
TPM_sc_young.txt

value: Young


title: gcn5del_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 gcn5 delta::KanMx


title: Young_EALL_P2_66

description:
RHT1613
TPM_sc_young.txt


title: WT565_B


title: Young_EALL_P2_65

description:
RHT1612
TPM_sc_young.txt


title: JHU-A53-P3


title: UNeb-MetPerigastric-P4

description: Perigastric-P4_21530_S01_CGH_107_Sep09_1_2

value: Perigastric metastasis rapid autopsy


title: Young_EALL_P2_64

description:
RHT1611
TPM_sc_young.txt


title: Young_EALL_P2_63

description:
RHT1610
TPM_sc_young.txt


title: Young_EALL_P2_61

description:
RHT1608
TPM_sc_young.txt


title: Young_EALL_P2_62

description:
RHT1609
TPM_sc_young.txt


title: WT4705_input_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0

value: 30 degrees in synthetic medium to mid-log phase


title: WT4705_input_A


title: WT565_input_A


title: WT4705_B


title: Young_EALL_P2_60

description:
RHT1607
TPM_sc_young.txt


title: Young_EALL_P2_59

description:
RHT1606
TPM_sc_young.txt


title: Young_EALL_P2_58

description:
RHT1605
TPM_sc_young.txt


title: Spt37degIAA_input_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 RPB3-3x Flag::NAT MX pGPD1-OSTIR::HIS3 SPT7-3xV5 IAA7::KanMX SPT3-3xV5 IAA7degron::URA3

value: 500 μM 3-IAA for 30 minutes followed by 6 minute RNA labeling with 4-tU


title: Spt37degDMSO_input_B

value: DMSO for 30 minutes followed by 6 minute RNA labeling with 4-tU


title: WT4705_A


title: Spt37degIAA_B


title: Young_EALL_P2_56

description:
RHT1603
TPM_sc_young.txt


title: Young_EALL_P2_55

description:
RHT1602
TPM_sc_young.txt


title: Young_EALL_P2_57

description:
RHT1604
TPM_sc_young.txt


title: WT565_A


title: blood_control_1

description:
202081130046_R01C01_Grn.idat
202081130046_R01C01_Red.idat
CTM1

tag: tissue

value: blood

tag: gender

value: male

tag: disease state

value: control

tag: cognition state

value: high


title: Spt37degIAA_A

tag: strain

tag: treatment


title: Spt37degIAA_input_A

tag: genotype

tag: growth


title: Spt37degDMSO_input_A


title: Young_EALL_P2_53

description:
RHT1600
TPM_sc_young.txt

tag: donorid

value: EALL

tag: plateid


title: Spt37degDMSO_B


title: Spt37degDMSO_A


title: Young_EALL_P2_50

description:
RHT1597
TPM_sc_young.txt

tag: batch

value: Naive CD4 T cell


title: gcn5_del_B

data_processing:
Paired-end sequencing reads were aligned to S. cerevisiae reference genome (sacCer3) and S. pombe reference genome (ASM294v2.20) with Bowtie2  using optional arguments “-I 10 -X 700 --local --very-sensitive-local --no-unal --no-mixed --no-discordant”.
SAM files for S. cerevisiae data were used as an input for HTseq-count with default settings. The GFF file with S. cerevisiae genomic features was downloaded from the Ensembl website.
Signal per gene was normalized by the number of all S. pombe reads mapped for the sample and multiplied by 10000 (arbitrarily chosen number). Genes classified as dubious, pseudogenes or transposable elements were excluded leaving 5794 genes for the downstream analysis.
Genome_build: sacCer3 (S. cerevisiae), ASM294v2.20 (S. pombe)
Supplementary_files_format_and_content: Processed CSV files contain normalized signal for all analyzed features (5794 mRNA genes).

extract_protocol:
Newly synthesized RNAs were labeled as previously described (Bonnet et al., 2014; PMID: 25228644). S. cerevisiae and previously labeled S. pombe cells were mixed in an 8:1 ratio and total RNA was extracted using the RiboPure yeast kit (Ambion, Life Technologies) using the following volumes:  480 μl lysis buffer, 48 μl 10% SDS, 480 μl phenol:CHCl3:IAA (25:24:1)  per S. cerevisiae pellet + 50 μl S. pombe (from a single S. pombe pellet resuspended in 850 μl lysis buffer). Total RNA was then biotinylated and purified essentially as described (Duffy et al., 2015; PMID: 26340425; Duffy and Simon, 2016; PMID: 27925666) using 40 μl (~40 μg) total RNA. In the last step 50 μl each of RNA sample eluted from streptavidin beads was adjusted to 100 μl with nuclease-free water and purified on RNeasy columns (Qiagen) using the modified protocol as described (Duffy and Simon, 2016; PMID: 27925666). RNAs were eluted into 14 μl nuclease-free water.
Ovation Universal RNA-seq System kits (Tecan)


title: Young_EALL_P2_49

description:
RHT1596
TPM_sc_young.txt

tag: cell type


title: Young_EALL_P2_51

description:
RHT1598
TPM_sc_young.txt

tag: developmental stage


title: ubp8_del_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0  ubp8 delta::KanMx


title: ubp8_del_A


title: WT_Rpb3Flag_DMSO_B

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 RPB3-3x Flag::NAT MX pGPD1-OSTIR::HIS3


title: gcn5_del_A

value: 6 minute RNA labeling with 4-tU


title: WT_Rpb3Flag_DMSO_A


title: WT_Rpb3Flag_3IAA_B


title: WT_4TU_input


title: Young_EALL_P2_54

description:
RHT1601
TPM_sc_young.txt

value: Young


title: WT_4705_B


title: WT_Rpb3Flag_3IAA_A


title: Young_EALL_P2_46

description:
RHT1593
TPM_sc_young.txt


title: Young_EALL_P2_44

description:
RHT1591
TPM_sc_young.txt


title: Young_EALL_P2_42

description:
RHT1589
TPM_sc_young.txt


title: Young_EALL_P2_45

description:
RHT1592
TPM_sc_young.txt


title: Young_EALL_P2_48

description:
RHT1595
TPM_sc_young.txt


title: Young_EALL_P2_47

description:
RHT1594
TPM_sc_young.txt


title: WT_4705_A


title: Young_EALL_P2_43

description:
RHT1590
TPM_sc_young.txt


title: Young_EALL_P2_52

description:
RHT1599
TPM_sc_young.txt


title: Rap1_B

description: Library strategy: ChEC-Seq

data_processing:
Paired-end sequencing reads were aligned to S. cerevisiae reference genome (sacCer3) and D. melanogaster reference genome (release 6.06) with Bowtie2 (Langmead and Salzberg, 2012) using optional arguments “-I 10 -X 700 --local --very-sensitive-local --no-unal --no-mixed --no-discordant”.
For each base pair in the genome, we counted the number of paired-end fragments aligned over it.
Signal per base pair was normalized by the number of all D. melanogaster reads mapped for the sample and multiplied by 10000 (arbitrarily chosen number).
Genome_build: sacCer3 (S. cerevisiae), release 6.06 (D. melanogaster)
Supplementary_files_format_and_content: Processed data is provided in a wig format and contains spike-in normalized signal per base pair.

extract_protocol:
ChEC-seq was performed as previously described (Grünberg et al., 2016; PMID: 27797823; Zentner et al., 2015; PMID: 26490019) with following modifications. The final calcium concentration in the reaction mixture was 0.2 mM (2 mM in the original protocol) and MNase digestion was done for 5 min for all collected samples. Stop buffer was supplemented with D. melanogaster MNase-digested DNA (1 ng/ml stock concentration) in the amount calculated based on S. cerevisiae culture A600 measurement (volume = A600 x 8 ul).
Sequencing libraries were prepared similarly as described (Warfield et al., 2017; PMID: 28918900) with several modifications. 1/6 vol of the final ChEC DNA sample was used as an input. Final adapter concentration during ligation was 6.5 nM. Following ligation, two-step cleanup was performed using 0.25X vol AMPure XP reagent in the first step and 1.1X vol in the second step. 18 cycles were used for library amplification.

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 RAP1-3xFlag-MNase::TRP1


title: Young_EALL_P2_41

description:
RHT1588
TPM_sc_young.txt


title: Rap1_A

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_40

description:
RHT1587
TPM_sc_young.txt


title: Young_EALL_P2_39

description:
RHT1586
TPM_sc_young.txt


title: Abf1_A

description: Library strategy: ChEC-Seq

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 ABF1-3xFlag-MNase::TRP1


title: Young_EALL_P2_37

description:
RHT1584
TPM_sc_young.txt


title: Young_EALL_P2_38

description:
RHT1585
TPM_sc_young.txt


title: Young_EALL_P2_36

description:
RHT1583
TPM_sc_young.txt


title: Abf1_B

description: Library strategy: ChEC-Seq


title: Taf13_C

description: Library strategy: ChEC-Seq

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 kin28 is Taf13-3xFlag-MNase::TRP1


title: Young_EALL_P2_35

description:
RHT1582
TPM_sc_young.txt


title: Taf7_D

description: Library strategy: ChEC-Seq

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 kin28 is Taf7-3xFlag-MNase::TRP1


title: Young_EALL_P2_32

description:
RHT1579
TPM_sc_young.txt


title: Young_EALL_P2_34

description:
RHT1581
TPM_sc_young.txt


title: Taf13_B

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_29

description:
RHT1576
TPM_sc_young.txt


title: Taf7_B

description: Library strategy: ChEC-Seq


title: Taf1_D

description: Library strategy: ChEC-Seq

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 RPB3-3x Flag::NAT MX pGPD1-OSTIR::HIS3 bdf2 delta::HPH BDF1-3xV5 IAA7::KanMX TAF1-3xFlag-MNase::TRP1


title: Young_EALL_P2_33

description:
RHT1580
TPM_sc_young.txt


title: Taf13_A

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_30

description:
RHT1577
TPM_sc_young.txt


title: Young_EALL_P2_31

description:
RHT1578
TPM_sc_young.txt


title: Taf7_A

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_28

description:
RHT1575
TPM_sc_young.txt


title: Taf1_B

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_25

description:
RHT1572
TPM_sc_young.txt


title: Taf7_C

description: Library strategy: ChEC-Seq


title: Taf1_A

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_26

description:
RHT1573
TPM_sc_young.txt


title: Spt7_D

description: Library strategy: ChEC-Seq

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 SPT7-3xFlag-MNase::TRP1


title: Taf13_D

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_24

description:
RHT1571
TPM_sc_young.txt


title: Young_EALL_P2_22

description:
RHT1569
TPM_sc_young.txt


title: Spt7_B

description: Library strategy: ChEC-Seq


title: Spt7_A

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_20

description:
RHT1567
TPM_sc_young.txt


title: Young_EALL_P2_21

description:
RHT1568
TPM_sc_young.txt


title: Young_EALL_P2_23

description:
RHT1570
TPM_sc_young.txt


title: Spt3_D

description: Library strategy: ChEC-Seq

value: mat alpha delta ade2::hisG his3 delta 200 leu2 delta 0 lys2 delta 0 met15 delta 0 trp1 delta 63 ura3 delta 0 SPT3-3xFlag-MNase::TRP1


title: Spt3_C

description: Library strategy: ChEC-Seq


title: Spt3_B

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_19

description:
RHT1566
TPM_sc_young.txt


title: Taf1_C

description: Library strategy: ChEC-Seq


title: Spt3_A

description: Library strategy: ChEC-Seq


title: Young_EALL_P2_18

description:
RHT1565
TPM_sc_young.txt


title: Young_EALL_P2_17

description:
RHT1564
TPM_sc_young.txt


title: Young_EALL_P2_27

description:
RHT1574
TPM_sc_young.txt


title: Young_EALL_P2_16

description:
RHT1563
TPM_sc_young.txt


title: Young_EALL_P2_73

description:
RHT1620
TPM_sc_young.txt