title: LK1380

description:
SH5Z343_Cell2
miRNA


title: LK1383

status: Public on Mar 30 2020

type: RNA

city: Kanagawa

first: Satoko

last: Takizawa

address: kamakurashi

country: Japan

institute: Toray industries inc

description:
SH5Z344_Cell1
miRNA

hyb_protocol: Hybridized for 16 h at 32 ºC with rotary shaker (250 rpm). Hybridization buffer and washing protocol was attached in the 3D-Gene® miRNA oligo chip kit.

scan_protocol: 3D-Gene® Scanner (Toray Industries, Inc.) was used for scanning. Images were quantified using Extraction version 2.0.0.6 (Toray Industries, Inc.).

data_processing: The presence of miRNA was determined based on a corresponding microarray signal of greater than [the mean + 2 × standard deviation] of the negative controls signal, of which the top and bottom ranked ones by signal intensity were removed. Once a miRNA was considered present, the mean signal of the negative controls of which the top and bottom 5% ranked by signal intensity were removed was subtracted from the miRNA signal. When the signal value was negative (or undetEsophageal Cancerted) after background subtraction, the value was replaced by 0.1 on a base 2 logarithm scale.

molecule: total RNA

organism: Homo sapiens

source_name: Serum

label_protocol: miRNA was labeled using 3D-Gene® miRNA Labeling kit in accordance with the manufacturer's instructions.

extract_protocol: Total RNA was extracted each from 300uL serum samples using 3D-Gene® RNA extraction reagent from liquid sample kit (Toray Industries, Inc.).

tag: disease state

value: Lung cancer, pre-operation

tag: Sex

value: Male

tag: age

tag: tissue

value: serum


title: LK1379

description:
SH5Z343_Cell1
miRNA

value: Female


title: LK1376

description:
SH5Z342_Cell2
miRNA


title: LK1378

description:
SH5Z342_Cell4
miRNA


title: LK1377

description:
SH5Z342_Cell3
miRNA


title: LK1374

description:
SH5Z341_Cell4
miRNA


title: LK1373

description:
SH5Z341_Cell3
miRNA


title: LK1375

description:
SH5Z342_Cell1
miRNA


title: LK1386

description:
SH61F03_Cell1
miRNA


title: LK1369

description:
SH61F02_Cell1
miRNA


title: LK1371

description:
SH5Z341_Cell1
miRNA


title: LK1372

description:
SH5Z341_Cell2
miRNA


title: LK1370

description:
SH61F02_Cell2
miRNA


title: LK1367

description:
SH5Z336_Cell1
miRNA


title: LK1366

description:
SH5Z333_Cell4
miRNA


title: LK1363

description:
SH5Z333_Cell1
miRNA


title: LK1365

description:
SH5Z333_Cell3
miRNA


title: LK1364

description:
SH5Z333_Cell2
miRNA


title: LK1358

description:
SH5Z326_Cell4
miRNA


title: LK1360

description:
SH5Z327_Cell2
miRNA


title: LK1362

description:
SH5Z327_Cell4
miRNA


title: LK1381

description:
SH5Z343_Cell3
miRNA


title: LK1357

description:
SH5Z326_Cell3
miRNA


title: LK1356

description:
SH5Z326_Cell2
miRNA


title: LK1355

description:
SH5Z326_Cell1
miRNA


title: LK1352

description:
SH5Z325_Cell2
miRNA


title: LK1354

description:
SH5Z325_Cell4
miRNA


title: LK1353

description:
SH5Z325_Cell3
miRNA


title: LK1368

description:
SH5Z336_Cell2
miRNA


title: LK1347

description:
SH5Z323_Cell1
miRNA


title: LK1348

description:
SH5Z323_Cell2
miRNA


title: LK1359

description:
SH5Z327_Cell1
miRNA


title: LK1350

description:
SH5Z323_Cell4
miRNA


title: LK1361

description:
SH5Z327_Cell3
miRNA


title: LK1346

description:
SH5Z322_Cell4
miRNA


title: LK1344

description:
SH5Z322_Cell2
miRNA


title: LK1345

description:
SH5Z322_Cell3
miRNA


title: LK1343

description:
SH5Z322_Cell1
miRNA


title: LK1341

description:
SH5Z320_Cell3
miRNA


title: LK1340

description:
SH5Z320_Cell2
miRNA


title: LK1334

description:
SH5Z318_Cell4
miRNA


title: LK1333

description:
SH5Z318_Cell3
miRNA


title: LK1339

description:
SH5Z320_Cell1
miRNA


title: LK1338

description:
SH5Z319_Cell4
miRNA


title: LK1351

description:
SH5Z325_Cell1
miRNA


title: LK1326

description:
SH5Z316_Cell4
miRNA


title: LK1332

description:
SH5Z318_Cell2
miRNA


title: LK1330

description:
SH5Z317_Cell4
miRNA


title: LK1327

description:
SH5Z317_Cell1
miRNA


title: LK1337

description:
SH5Z319_Cell3
miRNA


title: LK1331

description:
SH5Z318_Cell1
miRNA


title: LK1336

description:
SH5Z319_Cell2
miRNA


title: LK1325

description:
SH61E21_Cell3
miRNA


title: LK1328

description:
SH5Z317_Cell2
miRNA


title: LK1324

description:
SH5Z316_Cell2
miRNA


title: LK1322

description:
SH5Z315_Cell4
miRNA


title: LK1321

description:
SH5Z315_Cell3
miRNA


title: LK1320

description:
SH61E21_Cell2
miRNA


title: LK1323

description:
SH5Z316_Cell1
miRNA


title: LK1317

description:
SH61E21_Cell1
miRNA


title: LK1318

description:
SH5Z314_Cell4
miRNA


title: LK1315

description:
SH61E20_Cell3
miRNA


title: LK1314

description:
SH5Z312_Cell4
miRNA


title: LK1312

description:
SH5Z312_Cell2
miRNA


title: LK1311

description:
SH5Z312_Cell1
miRNA


title: LK1313

description:
SH5Z312_Cell3
miRNA


title: LK1319

description:
SH5Z315_Cell1
miRNA


title: LK1310

description:
SH5Z311_Cell4
miRNA


title: LK1306

description:
SH5Z308_Cell4
miRNA


title: LK1305

description:
SH5Z308_Cell3
miRNA


title: LK1298

description:
SH5Z305_Cell4
miRNA


title: LK1295

description:
SH5Z305_Cell1
miRNA


title: LK1301

description:
SH5Z306_Cell3
miRNA


title: LK1303

description:
SH5Z308_Cell1
miRNA


title: LK1300

description:
SH5Z306_Cell2
miRNA


title: LK1297

description:
SH5Z305_Cell3
miRNA


title: LK1294

description:
SH5Z304_Cell4
miRNA


title: LK1296

description:
SH5Z305_Cell2
miRNA


title: LK1293

description:
SH5Z304_Cell3
miRNA


title: LK1292

description:
SH5Z304_Cell2
miRNA


title: LK1299

description:
SH5Z306_Cell1
miRNA


title: LK1291

description:
SH5Z304_Cell1
miRNA


title: LK1288

description:
SH5Z302_Cell2
miRNA


title: LK1309

description:
SH5Z311_Cell3
miRNA


title: LK1308

description:
SH5Z311_Cell2
miRNA


title: LK1307

description:
SH5Z311_Cell1
miRNA


title: LK1287

description:
SH5Z302_Cell1
miRNA


title: LK1285

description:
SH5Z254_Cell3
miRNA


title: LK1289

description:
SH5Z302_Cell3
miRNA


title: LK1286

description:
SH5Z254_Cell4
miRNA


title: LK1284

description:
SH5Z254_Cell2
miRNA


title: LK1304

description:
SH5Z308_Cell2
miRNA


title: LK1282

description:
SH61E20_Cell2
miRNA


title: LK1283

description:
SH5Z254_Cell1
miRNA


title: LK1281

description:
SH5Z252_Cell3
miRNA


title: LK1280

description:
SH5Z252_Cell2
miRNA


title: LK1290

description:
SH5Z302_Cell4
miRNA


title: LK1279

description:
SH5Z252_Cell1
miRNA


title: LK1278

description:
SH5Z250_Cell4
miRNA


title: LK1276

description:
SH5Z250_Cell2
miRNA


title: LK1277

description:
SH5Z250_Cell3
miRNA


title: LK1271

description:
SH5Z248_Cell1
miRNA


title: LK1272

description:
SH5Z248_Cell2
miRNA


title: LK1275

description:
SH5Z250_Cell1
miRNA


title: LK1270

description:
SH5Z247_Cell4
miRNA


title: LK1273

description:
SH5Z248_Cell3
miRNA


title: LK1269

description:
SH5Z247_Cell3
miRNA


title: LK1258

description:
SH5Z243_Cell4
miRNA


title: LK1265

description:
SH5Z246_Cell3
miRNA


title: LK1266

description:
SH5Z246_Cell4
miRNA


title: LK1257

description:
SH5Z243_Cell3
miRNA


title: LK1268

description:
SH5Z247_Cell2
miRNA


title: LK1255

description:
SH5Z243_Cell1
miRNA


title: LK1249

description:
SH5Z241_Cell3
miRNA


title: LK1251

description:
SH5Z242_Cell1
miRNA


title: LK1260

description:
SH5Z245_Cell2
miRNA


title: LK1253

description:
SH5Z242_Cell3
miRNA


title: LK1256

description:
SH5Z243_Cell2
miRNA


title: LK1254

description:
SH5Z242_Cell4
miRNA


title: LK1250

description:
SH5Z241_Cell4
miRNA


title: LK1248

description:
SH5Z241_Cell2
miRNA


title: LK1252

description:
SH5Z242_Cell2
miRNA


title: LK1261

description:
SH5Z245_Cell3
miRNA


title: LK1247

description:
SH5Z241_Cell1
miRNA


title: LK1246

description:
SH5Z240_Cell4
miRNA


title: LK1274

description:
SH5Z248_Cell4
miRNA


title: LK1245

description:
SH5Z240_Cell3
miRNA


title: LK1242

description:
SH5Z239_Cell4
miRNA


title: LK1243

description:
SH5Z240_Cell1
miRNA


title: LK1241

description:
SH5Z239_Cell3
miRNA


title: LK1239

description:
SH5Z239_Cell1
miRNA


title: LK1238

description:
SH61E20_Cell1
miRNA


title: LK1240

description:
SH5Z239_Cell2
miRNA


title: LK1234

description:
SH5Z235_Cell4
miRNA


title: LK1236

description:
SH5Z238_Cell2
miRNA


title: LK1233

description:
SH5Z235_Cell3
miRNA


title: LK1228

description:
SH5Z234_Cell2
miRNA


title: LK1232

description:
SH5Z235_Cell2
miRNA


title: LK1231

description:
SH5Z235_Cell1
miRNA


title: LK1230

description:
SH5Z234_Cell4
miRNA


title: LK1227

description:
SH5Z234_Cell1
miRNA


title: LK1229

description:
SH5Z234_Cell3
miRNA


title: LK1226

description:
SH5Z233_Cell4
miRNA


title: LK1220

description:
SH5Z229_Cell2
miRNA


title: LK1222

description:
SH5Z229_Cell4
miRNA


title: LK1217

description:
SH5Z227_Cell3
miRNA


title: LK1221

description:
SH5Z229_Cell3
miRNA


title: LK1218

description:
SH5Z227_Cell4
miRNA


title: LK1223

description:
SH5Z233_Cell1
miRNA


title: LK1213

description:
SH5Z225_Cell3
miRNA


title: LK1215

description:
SH61E19_Cell4
miRNA


title: LK1214

description:
SH5Z225_Cell4
miRNA


title: LK1235

description:
SH5Z238_Cell1
miRNA


title: LK1211

description:
SH5Z225_Cell1
miRNA


title: LK1205

description:
SH61E19_Cell3
miRNA


title: LK1203

description:
SH5Z215_Cell1
miRNA


title: LK1224

description:
SH5Z233_Cell2
miRNA


title: LK1204

description:
SH5Z215_Cell2
miRNA


title: LK1212

description:
SH5Z225_Cell2
miRNA


title: LK1210

description:
SH5Z223_Cell4
miRNA


title: LK1207

description:
SH5Z223_Cell1
miRNA


title: LK1209

description:
SH5Z223_Cell3
miRNA


title: LK1202

description:
SH5Z211_Cell4
miRNA


title: LK1194

description:
SH5Z204_Cell4
miRNA


title: LK1206

description:
SH5Z215_Cell4
miRNA


title: LK1193

description:
SH5Z204_Cell3
miRNA


title: LK1195

description:
SH5Z208_Cell1
miRNA


title: LK1189

description:
SH5Z148_Cell3
miRNA


title: LK1186

description:
SH5Z145_Cell4
miRNA


title: LK1191

description:
SH5Z204_Cell1
miRNA


title: LK1192

description:
SH5Z204_Cell2
miRNA


title: LK1196

description:
SH5Z208_Cell2
miRNA


title: LK1197

description:
SH5Z208_Cell3
miRNA


title: LK1199

description:
SH5Z211_Cell1
miRNA


title: LK1190

description:
SH5Z148_Cell4
miRNA


title: LK1200

description:
SH5Z211_Cell2
miRNA


title: LK1188

description:
SH5Z148_Cell2
miRNA


title: LK1183

description:
SH5Z145_Cell1
miRNA


title: LK1182

description:
SH5Z144_Cell4
miRNA


title: LK1181

description:
SH5Z144_Cell3
miRNA


title: LK1225

description:
SH5Z233_Cell3
miRNA


title: LK1180

description:
SH5Z144_Cell2
miRNA


title: LK1177

description:
SH5Z142_Cell3
miRNA


title: LK1176

description:
SH5Z142_Cell2
miRNA


title: LK1175

description:
SH5Z142_Cell1
miRNA


title: LK1178

description:
SH5Z142_Cell4
miRNA


title: LK1173

description:
SH5Z139_Cell3
miRNA


title: LK1187

description:
SH5Z148_Cell1
miRNA


title: LK1174

description:
SH5Z139_Cell4
miRNA


title: LK1185

description:
SH5Z145_Cell3
miRNA


title: LK1184

description:
SH5Z145_Cell2
miRNA


title: LK1172

description:
SH5Z139_Cell2
miRNA


title: LK1170

description:
SH5Z137_Cell4
miRNA


title: LK1168

description:
SH61E19_Cell2
miRNA


title: LK1167

description:
SH61E19_Cell1
miRNA


title: LK1158

description:
SH5Z133_Cell4
miRNA


title: LK1159

description:
SH5Z134_Cell1
miRNA


title: LK1156

description:
SH5Z133_Cell2
miRNA


title: LK1161

description:
SH5Z134_Cell3
miRNA


title: LK1162

description:
SH5Z134_Cell4
miRNA


title: LK1157

description:
SH5Z133_Cell3
miRNA


title: LK1164

description:
SH5Z135_Cell2
miRNA


title: LK1163

description:
SH5Z135_Cell1
miRNA


title: LK1154

description:
SH5Z125_Cell4
miRNA


title: LK1171

description:
SH5Z139_Cell1
miRNA


title: LK1153

description:
SH5Z125_Cell3
miRNA


title: LK1150

description:
SH5Z124_Cell4
miRNA


title: LK1144

description:
SH5Z123_Cell2
miRNA


title: LK1151

description:
SH5Z125_Cell1
miRNA


title: LK1145

description:
SH5Z123_Cell3
miRNA


title: LK1148

description:
SH5Z124_Cell2
miRNA


title: LK1152

description:
SH5Z125_Cell2
miRNA


title: LK1147

description:
SH5Z124_Cell1
miRNA


title: LK1166

description:
SH5Z135_Cell4
miRNA


title: LK1141

description:
SH5Z120_Cell3
miRNA


title: LK1143

description:
SH5Z123_Cell1
miRNA


title: LK1142

description:
SH5Z120_Cell4
miRNA


title: LK1146

description:
SH5Z123_Cell4
miRNA


title: LK1165

description:
SH5Z135_Cell3
miRNA


title: LK1155

description:
SH5Z133_Cell1
miRNA


title: LK1138

description:
SH5Z119_Cell4
miRNA


title: LK1140

description:
SH5Z120_Cell2
miRNA


title: LK1137

description:
SH5Z119_Cell3
miRNA


title: LK1133

description:
SH5Z118_Cell3
miRNA


title: LK1126

description:
SH5Z116_Cell4
miRNA


title: LK1132

description:
SH5Z118_Cell2
miRNA


title: LK1127

description:
SH5Z117_Cell1
miRNA


title: LK1131

description:
SH5Z118_Cell1
miRNA


title: LK1130

description:
SH5Z117_Cell4
miRNA


title: LK1125

description:
SH5Z116_Cell3
miRNA


title: LK1129

description:
SH5Z117_Cell3
miRNA


title: LK1122

description:
SH5Z115_Cell4
miRNA


title: LK1124

description:
SH5Z116_Cell2
miRNA


title: LK1123

description:
SH5Z116_Cell1
miRNA


title: LK1120

description:
SH5Z115_Cell2
miRNA


title: LK1118

description:
SH5Z114_Cell4
miRNA


title: LK1119

description:
SH5Z115_Cell1
miRNA


title: LK1112

description:
SH5Z111_Cell2
miRNA


title: LK1117

description:
SH5Z114_Cell3
miRNA


title: LK1115

description:
SH5Z114_Cell1
miRNA


title: LK1114

description:
SH5Z111_Cell4
miRNA


title: LK1113

description:
SH5Z111_Cell3
miRNA


title: LK1128

description:
SH5Z117_Cell2
miRNA


title: LK1109

description:
SH5Z109_Cell3
miRNA


title: LK1106

description:
SH5Z104_Cell4
miRNA


title: LK1108

description:
SH5Z109_Cell2
miRNA


title: LK1110

description:
SH5Z109_Cell4
miRNA


title: LK1149

description:
SH5Z124_Cell3
miRNA


title: LK1103

description:
SH5Z104_Cell1
miRNA


title: LK1121

description:
SH5Z115_Cell3
miRNA


title: LK1107

description:
SH5Z109_Cell1
miRNA


title: LK1102

description:
SH5Z103_Cell4
miRNA


title: LK1101

description:
SH5Z103_Cell3
miRNA


title: LK1111

description:
SH5Z111_Cell1
miRNA


title: LK1100

description:
SH5Z103_Cell2
miRNA


title: LK1105

description:
SH5Z104_Cell3
miRNA


title: LK1104

description:
SH5Z104_Cell2
miRNA


title: LK1096

description:
SH5Z102_Cell2
miRNA


title: LK1097

description:
SH5Z102_Cell3
miRNA


title: LK1099

description:
SH5Z103_Cell1
miRNA


title: LK1092

description:
SH5Z101_Cell2
miRNA


title: LK1095

description:
SH5Z102_Cell1
miRNA


title: LK1090

description:
SH5YY56_Cell4
miRNA


title: LK1091

description:
SH5Z101_Cell1
miRNA


title: LK1089

description:
SH5YY56_Cell3
miRNA


title: LK1085

description:
SH5YY55_Cell3
miRNA


title: LK1088

description:
SH5YY56_Cell2
miRNA


title: LK1086

description:
SH5YY55_Cell4
miRNA


title: LK1084

description:
SH5YY55_Cell2
miRNA


title: LK1083

description:
SH5YY55_Cell1
miRNA


title: LK1093

description:
SH5Z101_Cell3
miRNA


title: LK1081

description:
SH5YY54_Cell3
miRNA


title: LK1079

description:
SH5YY54_Cell1
miRNA


title: LK1078

description:
SH5YY53_Cell4
miRNA


title: LK1080

description:
SH5YY54_Cell2
miRNA


title: LK1075

description:
SH5YY53_Cell1
miRNA


title: LK1064

description:
SH5YY44_Cell2
miRNA


title: LK1066

description:
SH5YY44_Cell4
miRNA


title: LK1070

description:
SH5YY45_Cell4
miRNA


title: LK1074

description:
SH5YY46_Cell4
miRNA


title: LK1077

description:
SH5YY53_Cell3
miRNA


title: LK1073

description:
SH5YY46_Cell3
miRNA


title: LK1087

description:
SH5YY56_Cell1
miRNA


title: LK1076

description:
SH5YY53_Cell2
miRNA


title: LK1067

description:
SH5YY45_Cell1
miRNA


title: LK1060

description:
SH5YY43_Cell2
miRNA


title: LK1069

description:
SH5YY45_Cell3
miRNA


title: LK1068

description:
SH5YY45_Cell2
miRNA


title: LK1058

description:
SH5Z344_Cell3
miRNA


title: LK1063

description:
SH5YY44_Cell1
miRNA


title: LK1061

description:
SH5YY43_Cell3
miRNA


title: LK1057

description:
SH5Z344_Cell2
miRNA


title: LK1056

description:
SH5YY41_Cell2
miRNA


title: LK1054

description:
SH5YY40_Cell4
miRNA


title: LK1055

description:
SH5YY41_Cell1
miRNA


title: LK1053

description:
SH5YY40_Cell3
miRNA


title: LK1072

description:
SH5YY46_Cell2
miRNA


title: LK1062

description:
SH5Z344_Cell4
miRNA


title: LK1065

description:
SH5YY44_Cell3
miRNA


title: LK1046

description:
SH5YY38_Cell4
miRNA


title: LK1048

description:
SH5YY39_Cell2
miRNA


title: LK1036

description:
SH5YY36_Cell2
miRNA


title: LK1031

description:
SH5YY35_Cell1
miRNA


title: LK1040

description:
SH5YY37_Cell2
miRNA


title: LK1038

description:
SH5YY36_Cell4
miRNA


title: LK1047

description:
SH5YY39_Cell1
miRNA


title: LK1043

description:
SH5YY38_Cell1
miRNA


title: LK1045

description:
SH5YY38_Cell3
miRNA


title: LK1034

description:
SH5YY35_Cell4
miRNA


title: LK1051

description:
SH5YY40_Cell1
miRNA


title: LK1035

description:
SH5YY36_Cell1
miRNA


title: LK1049

description:
SH5YY39_Cell3
miRNA


title: LK1032

description:
SH5YY35_Cell2
miRNA


title: LK1033

description:
SH5YY35_Cell3
miRNA


title: LK1044

description:
SH5YY38_Cell2
miRNA


title: LK1050

description:
SH5YY39_Cell4
miRNA


title: LK1042

description:
SH5YY37_Cell4
miRNA


title: LK1037

description:
SH5YY36_Cell3
miRNA


title: LK1029

description:
SH5YY34_Cell3
miRNA


title: LK1039

description:
SH5YY37_Cell1
miRNA


title: LK1028

description:
SH5YY34_Cell2
miRNA


title: LK1022

description:
SH5YY30_Cell4
miRNA


title: LK1030

description:
SH5YY34_Cell4
miRNA


title: LK1023

description:
SH5YY33_Cell1
miRNA


title: LK1026

description:
SH5YY33_Cell4
miRNA


title: LK1025

description:
SH5YY33_Cell3
miRNA


title: LK1024

description:
SH5YY33_Cell2
miRNA


title: LK1021

description:
SH5YY30_Cell3
miRNA


title: LK1019

description:
SH5YY30_Cell1
miRNA


title: LK1027

description:
SH5YY34_Cell1
miRNA


title: LK1016

description:
SH5YY29_Cell2
miRNA


title: LK1018

description:
SH5YY29_Cell4
miRNA


title: LK1017

description:
SH5YY29_Cell3
miRNA


title: LK1013

description:
SH5YY28_Cell3
miRNA


title: LK1014

description:
SH5YY28_Cell4
miRNA


title: LK1005

description:
SH5YY26_Cell3
miRNA


title: LK1002

description:
SH5YY25_Cell4
miRNA


title: LK1003

description:
SH5YY26_Cell1
miRNA


title: LK1001

description:
SH5YY25_Cell3
miRNA


title: LK1009

description:
SH5YY27_Cell3
miRNA


title: LK1007

description:
SH5YY27_Cell1
miRNA


title: LK1000

description:
SH5YY25_Cell2
miRNA


title: LK1006

description:
SH5YY26_Cell4
miRNA


title: LK0997

description:
SH5YY23_Cell3
miRNA


title: LK0996

description:
SH5YY23_Cell2
miRNA


title: LK0994

description:
SH5YY22_Cell4
miRNA


title: LK0993

description:
SH5YY22_Cell3
miRNA


title: LK0992

description:
SH5YY22_Cell2
miRNA


title: LK0989

description:
SH5YY20_Cell3
miRNA


title: LK1004

description:
SH5YY26_Cell2
miRNA


title: LK0991

description:
SH5YY22_Cell1
miRNA


title: LK1015

description:
SH5YY29_Cell1
miRNA


title: LK0988

description:
SH5YY20_Cell2
miRNA


title: LK0987

description:
SH5YY20_Cell1
miRNA


title: LK0990

description:
SH5YY20_Cell4
miRNA


title: LK0985

description:
SH5YY19_Cell3
miRNA


title: LK0984

description:
SH5YY19_Cell2
miRNA


title: LK0981

description:
SH5YY18_Cell3
miRNA


title: LK0980

description:
SH5YY18_Cell2
miRNA


title: LK0998

description:
SH5YY23_Cell4
miRNA


title: LK0983

description:
SH5YY19_Cell1
miRNA


title: LK0971

description:
SH5YY16_Cell1
miRNA


title: LK0973

description:
SH5YY16_Cell3
miRNA


title: LK0970

description:
SH5YY15_Cell4
miRNA


title: LK0972

description:
SH5YY16_Cell2
miRNA


title: LK0974

description:
SH5YY16_Cell4
miRNA


title: LK0975

description:
SH5YY17_Cell1
miRNA


title: LK0976

description:
SH5YY17_Cell2
miRNA


title: LK1094

description:
SH5Z101_Cell4
miRNA


title: LK0969

description:
SH5YY15_Cell3
miRNA


title: LK0968

description:
SH5YY15_Cell2
miRNA


title: LK0965

description:
SH5YY14_Cell3
miRNA


title: LK0967

description:
SH5YY15_Cell1
miRNA


title: LK0977

description:
SH5YY17_Cell3
miRNA


title: LK0966

description:
SH5YY14_Cell4
miRNA


title: LK0964

description:
SH5YY14_Cell2
miRNA


title: LK0963

description:
SH5YY14_Cell1
miRNA


title: LK0961

description:
SH5YY13_Cell3
miRNA


title: LK0962

description:
SH5YY13_Cell4
miRNA


title: LK0978

description:
SH5YY17_Cell4
miRNA


title: LK0959

description:
SH5YY13_Cell1
miRNA


title: LK0979

description:
SH5YY18_Cell1
miRNA


title: LK0957

description:
SH5YY12_Cell3
miRNA


title: LK0960

description:
SH5YY13_Cell2
miRNA


title: LK0955

description:
SH5YY12_Cell1
miRNA


title: LK0952

description:
SH5YY11_Cell2
miRNA


title: LK0950

description:
SH5YY09_Cell4
miRNA


title: LK0954

description:
SH5YY11_Cell4
miRNA


title: LK0953

description:
SH5YY11_Cell3
miRNA


title: LK0945

description:
SH5YY08_Cell3
miRNA


title: LK0948

description:
SH5YY09_Cell2
miRNA


title: LK0947

description:
SH5YY09_Cell1
miRNA


title: LK0942

description:
SH5YY07_Cell4
miRNA


title: LK0949

description:
SH5YY09_Cell3
miRNA


title: LK0944

description:
SH5YY08_Cell2
miRNA


title: LK0943

description:
SH5YY08_Cell1
miRNA


title: LK0946

description:
SH5YY08_Cell4
miRNA


title: LK0938

description:
SH5YY06_Cell4
miRNA


title: LK0935

description:
SH5YY06_Cell1
miRNA


title: LK0939

description:
SH5YY07_Cell1
miRNA


title: LK0999

description:
SH5YY25_Cell1
miRNA


title: LK0936

description:
SH5YY06_Cell2
miRNA


title: LK0934

description:
SH5YY05_Cell4
miRNA


title: LK0956

description:
SH5YY12_Cell2
miRNA


title: LK0933

description:
SH5YY05_Cell3
miRNA


title: LK0928

description:
SH5YY03_Cell2
miRNA


title: LK0951

description:
SH5YY11_Cell1
miRNA


title: LK0932

description:
SH5YY05_Cell2
miRNA


title: LK0931

description:
SH5YY05_Cell1
miRNA


title: LK1012

description:
SH5YY28_Cell2
miRNA


title: LK0930

description:
SH5YY03_Cell4
miRNA


title: LK0940

description:
SH5YY07_Cell2
miRNA


title: LK0927

description:
SH5YY03_Cell1
miRNA


title: LK0941

description:
SH5YY07_Cell3
miRNA


title: LK0926

description:
SH5YY02_Cell4
miRNA


title: LK0924

description:
SH5YY02_Cell2
miRNA


title: LK0925

description:
SH5YY02_Cell3
miRNA


title: LK0923

description:
SH5YY02_Cell1
miRNA


title: LK0917

description:
SH5YS62_Cell3
miRNA


title: LK0922

description:
SH5YY01_Cell4
miRNA


title: LK0919

description:
SH5YY01_Cell1
miRNA


title: LK0918

description:
SH5YS62_Cell4
miRNA


title: LK0921

description:
SH5YY01_Cell3
miRNA


title: LK0915

description:
SH5YS62_Cell1
miRNA


title: LK0916

description:
SH5YS62_Cell2
miRNA


title: LK0914

description:
SH5YS60_Cell4
miRNA


title: LK0905

description:
SH5YS58_Cell3
miRNA


title: LK0908

description:
SH5YS59_Cell2
miRNA


title: LK0903

description:
SH5YS58_Cell1
miRNA


title: LK0912

description:
SH5YS60_Cell2
miRNA


title: LK0913

description:
SH5YS60_Cell3
miRNA


title: LK0906

description:
SH5YS58_Cell4
miRNA


title: LK0907

description:
SH5YS59_Cell1
miRNA


title: LK0910

description:
SH5YS59_Cell4
miRNA


title: LK0911

description:
SH5YS60_Cell1
miRNA


title: LK0904

description:
SH5YS58_Cell2
miRNA


title: LK0902

description:
SH5YS57_Cell4
miRNA


title: LK0901

description:
SH5YS57_Cell3
miRNA


title: LK0897

description:
SH5YS54_Cell3
miRNA


title: LK0895

description:
SH5YS54_Cell1
miRNA


title: LK0898

description:
SH5YS54_Cell4
miRNA


title: LK0896

description:
SH5YS54_Cell2
miRNA


title: LK0894

description:
SH5YS53_Cell4
miRNA


title: LK1020

description:
SH5YY30_Cell2
miRNA


title: LK0892

description:
SH5YS53_Cell2
miRNA


title: LK0891

description:
SH5YS53_Cell1
miRNA


title: LK0890

description:
SH5YS52_Cell4
miRNA


title: LK0887

description:
SH5YS52_Cell1
miRNA


title: LK0886

description:
SH5YS51_Cell4
miRNA


title: LK0889

description:
SH5YS52_Cell3
miRNA


title: LK0884

description:
SH5YS51_Cell2
miRNA


title: LK0888

description:
SH5YS52_Cell2
miRNA


title: LK0899

description:
SH5YS57_Cell1
miRNA


title: LK0885

description:
SH5YS51_Cell3
miRNA


title: LK0882

description:
SH5YS50_Cell4
miRNA


title: LK0883

description:
SH5YS51_Cell1
miRNA


title: LK0881

description:
SH5Z127_Cell4
miRNA


title: LK0880

description:
SH5YS50_Cell2
miRNA


title: LK0877

description:
SH5YS49_Cell3
miRNA


title: LK0879

description:
SH5YS50_Cell1
miRNA


title: LK0878

description:
SH5YS49_Cell4
miRNA


title: LK0875

description:
SH5YS49_Cell1
miRNA


title: LK0869

description:
SH5YS47_Cell3
miRNA


title: LK0874

description:
SH5YS48_Cell4
miRNA


title: LK0872

description:
SH5YS48_Cell2
miRNA


title: LK0873

description:
SH5YS48_Cell3
miRNA


title: LK0868

description:
SH5YS47_Cell2
miRNA


title: LK0871

description:
SH5YS48_Cell1
miRNA


title: LK0861

description:
SH5YS45_Cell3
miRNA


title: LK0870

description:
SH5YS47_Cell4
miRNA


title: LK0867

description:
SH5YS47_Cell1
miRNA


title: LK0865

description:
SH5YS46_Cell3
miRNA


title: LK0860

description:
SH5YS45_Cell2
miRNA


title: LK0864

description:
SH5YS46_Cell2
miRNA


title: LK0863

description:
SH5YS46_Cell1
miRNA


title: LK0876

description:
SH5YS49_Cell2
miRNA


title: LK0857

description:
SH5YS44_Cell3
miRNA


title: LK0855

description:
SH5YS44_Cell1
miRNA


title: LK0856

description:
SH5YS44_Cell2
miRNA


title: LK0853

description:
SH5YS43_Cell3
miRNA


title: LK0866

description:
SH5YS46_Cell4
miRNA


title: LK0847

description:
SH5YS42_Cell1
miRNA


title: LK0849

description:
SH5YS42_Cell3
miRNA


title: LK0846

description:
SH5YS41_Cell4
miRNA


title: LK0850

description:
SH5YS42_Cell4
miRNA


title: LK0845

description:
SH5Z127_Cell1
miRNA


title: LK0851

description:
SH5YS43_Cell1
miRNA


title: LK0852

description:
SH5YS43_Cell2
miRNA


title: LK0841

description:
SH5YS40_Cell3
miRNA


title: LK0843

description:
SH5YS41_Cell1
miRNA


title: LK0840

description:
SH5YS40_Cell2
miRNA


title: LK0838

description:
SH5YS39_Cell4
miRNA


title: LK0842

description:
SH5YS40_Cell4
miRNA


title: LK0859

description:
SH5YS45_Cell1
miRNA


title: LK0854

description:
SH5YS43_Cell4
miRNA


title: LK0837

description:
SH5YS39_Cell3
miRNA


title: LK0836

description:
SH5YS39_Cell2
miRNA


title: LK0835

description:
SH5YS39_Cell1
miRNA


title: LK0834

description:
SH5YS37_Cell4
miRNA


title: LK0829

description:
SH5YS34_Cell3
miRNA


title: LK0833

description:
SH5YS37_Cell3
miRNA


title: LK0828

description:
SH5YS34_Cell2
miRNA


title: LK0826

description:
SH5YS33_Cell4
miRNA


title: LK0832

description:
SH5YS37_Cell2
miRNA


title: LK0827

description:
SH5YS34_Cell1
miRNA


title: LK0844

description:
SH5YS41_Cell2
miRNA


title: LK0824

description:
SH5YS33_Cell2
miRNA


title: LK0839

description:
SH5YS40_Cell1
miRNA


title: LK0825

description:
SH5YS33_Cell3
miRNA


title: LK0819

description:
SH5YS32_Cell1
miRNA


title: LK0831

description:
SH5YS37_Cell1
miRNA


title: LK0817

description:
SH5YS30_Cell3
miRNA


title: LK0814

description:
SH5YS29_Cell4
miRNA


title: LK0822

description:
SH5YS32_Cell4
miRNA


title: LK0823

description:
SH5YS33_Cell1
miRNA


title: LK0811

description:
SH5YS29_Cell1
miRNA


title: LK0813

description:
SH5YS29_Cell3
miRNA


title: LK0815

description:
SH5YS30_Cell1
miRNA


title: LK0812

description:
SH5YS29_Cell2
miRNA


title: LK0820

description:
SH5YS32_Cell2
miRNA


title: LK0816

description:
SH5YS30_Cell2
miRNA


title: LK0810

description:
SH5YS28_Cell4
miRNA


title: LK0807

description:
SH5YS28_Cell1
miRNA


title: LK0821

description:
SH5YS32_Cell3
miRNA


title: LK0808

description:
SH5YS28_Cell2
miRNA


title: LK0803

description:
SH5YS27_Cell1
miRNA


title: LK0799

description:
SH5YS25_Cell1
miRNA


title: LK0800

description:
SH5YS25_Cell2
miRNA


title: LK0797

description:
SH5YS24_Cell3
miRNA


title: LK0809

description:
SH5YS28_Cell3
miRNA


title: LK0818

description:
SH5YS30_Cell4
miRNA


title: LK0806

description:
SH5YS27_Cell4
miRNA


title: LK0802

description:
SH5YS25_Cell4
miRNA


title: LK0794

description:
SH5YS23_Cell4
miRNA


title: LK0798

description:
SH5YS24_Cell4
miRNA


title: LK0796

description:
SH5YS24_Cell2
miRNA


title: LK0792

description:
SH5YS23_Cell2
miRNA


title: LK0789

description:
SH5YS22_Cell3
miRNA


title: LK0801

description:
SH5YS25_Cell3
miRNA


title: LK0795

description:
SH5YS24_Cell1
miRNA


title: LK0788

description:
SH5YS22_Cell2
miRNA


title: LK0791

description:
SH5YS23_Cell1
miRNA


title: LK0787

description:
SH5YS22_Cell1
miRNA


title: LK0786

description:
SH5YS21_Cell4
miRNA


title: LK0781

description:
SH5YS20_Cell3
miRNA


title: LK0790

description:
SH5YS22_Cell4
miRNA


title: LK0783

description:
SH5YS21_Cell1
miRNA


title: LK0785

description:
SH5YS21_Cell3
miRNA


title: LK0778

description:
SH5Z126_Cell2
miRNA


title: LK0780

description:
SH5YS20_Cell2
miRNA


title: LK0893

description:
SH5YS53_Cell3
miRNA


title: LK0793

description:
SH5YS23_Cell3
miRNA


title: LK0775

description:
SH5YS19_Cell1
miRNA


title: LK0776

description:
SH5YS19_Cell2
miRNA


title: LK0777

description:
SH5YS19_Cell3
miRNA


title: LK0784

description:
SH5YS21_Cell2
miRNA


title: LK0774

description:
SH5YS18_Cell4
miRNA


title: LK0773

description:
SH5YS18_Cell3
miRNA


title: LK0772

description:
SH5YS18_Cell2
miRNA


title: LK0779

description:
SH5YS20_Cell1
miRNA


title: LK0770

description:
SH5YS16_Cell4
miRNA


title: LK0769

description:
SH5YS16_Cell3
miRNA


title: LK0764

description:
SH5YS15_Cell2
miRNA


title: LK0766

description:
SH5YS15_Cell4
miRNA


title: LK0768

description:
SH5YS16_Cell2
miRNA


title: LK0767

description:
SH5YS16_Cell1
miRNA


title: LK0761

description:
SH5YS14_Cell3
miRNA


title: LK0765

description:
SH5YS15_Cell3
miRNA


title: LK0762

description:
SH5YS14_Cell4
miRNA


title: LK0759

description:
SH5YS14_Cell1
miRNA


title: LK0760

description:
SH5YS14_Cell2
miRNA


title: LK0750

description:
SH5Z126_Cell1
miRNA


title: LK0756

description:
SH5YS13_Cell2
miRNA


title: LK0749

description:
SH5YS11_Cell3
miRNA


title: LK0758

description:
SH5YS13_Cell4
miRNA


title: LK0755

description:
SH5YS13_Cell1
miRNA


title: LK0746

description:
SH5YS09_Cell4
miRNA


title: LK0771

description:
SH5YS18_Cell1
miRNA


title: LK0744

description:
SH5YS09_Cell2
miRNA


title: LK0743

description:
SH5YS09_Cell1
miRNA


title: LK0742

description:
SH5YS08_Cell4
miRNA


title: LK0748

description:
SH5YS11_Cell2
miRNA


title: LK0763

description:
SH5YS15_Cell1
miRNA


title: LK0753

description:
SH5YS12_Cell3
miRNA


title: LK0737

description:
SH59Q21_Cell3
miRNA


title: LK0738

description:
SH59Q21_Cell4
miRNA


title: LK0741

description:
SH5YS08_Cell3
miRNA


title: LK0736

description:
SH59Q21_Cell2
miRNA


title: hlh-30_AL_4

type: SRA

city: Koln

first: Jorge

last: Boucas

address: Joseph-Stelzmann-Str. 9b

department: Bioinformatics

country: Germany

institute: Max Planck Institute for Biology of Ageing

library_source: transcriptomic

data_processing:
Trimming: flexbar 2.5; -n 18 -ao 10 -u 5 -q 20 -m 20 -f i1.8 -ae ANY
Alignment: Hisat 0.1.6-beta
Guided assembly: StringTie 1.0.4; -p 18 -G ORIGINAL_GTF -f 0.99
Merging assemblies: Cuffmerge 2.2.1; --min-isoform-fraction 1.0
Quantification: Cuffquant 2.2.1
Differential analysis: Cuffdiff 2.2.1; --dispersion-method per-condition
Genome_build: WBcel235
Supplementary_files_format_and_content: gene.expression.tsv: tab-separated values

molecule: polyA RNA

organism: Caenorhabditis elegans

source_name: whole organism

growth_protocol: Worms were cultured at 20°C. Ad libitum (AL) bacteria conditions: Nematodes were cultured using standard techniques on nematode growth medium agar plates with the Escherichia coli strain OP50.

extract_protocol:
RNA was collected in Trizol. Total RNA and polyA+ mRNA were isolated using mRNAeasy Mini Kit (QIAGEN) and NEBNext Poly(A) mRNA Magnetics Isolation Module (New England Biolabs), respectively.
RNA-seq libraries were prepared with the NEBNext Ultra Directional RNA Library Prep Kit for Illumina (New England Biolabs).

treatment_protocol: To induce ARD, eggs were enriched by the standard hypochlorite treatment, grown to the mid L3 stage and larvae collected in 2ml M9 buffer in a 2.5ml Eppendorf tube. M9 buffer was replaced after 20 minutes, which was repeated four times to clear gut microbes. Afterwards, ca. 600 worms were pipetted onto 3cm plates with 4ml Nematode Growth Medium (NGM) containing UltraPureTM agarose (Thermo Fisher Scientific) and 50μg/ml ampicillin. One day after ARD induction plates were wrapped with parafilm.

tag: strain

tag: diet

value: ad libitum bacteria

tag: dev. stage

value: mid L3


title: LK0740

description:
SH5YS08_Cell2
miRNA


title: hlh-30_ARD_4

value: starvation from mid L3 on

value: 24 hours ARD


title: LK0745

description:
SH5YS09_Cell3
miRNA


title: N2_AL_4


title: LK0757

description:
SH5YS13_Cell3
miRNA


title: hlh-30_ARD_3


title: LK0754

description:
SH5YS12_Cell4
miRNA


title: LK0734

description:
SH59Q20_Cell4
miRNA


title: hlh-30_AL_3


title: LK0733

description:
SH59Q20_Cell3
miRNA


title: N2_AL_3


title: LK0747

description:
SH5YS11_Cell1
miRNA


title: hlh-30_ARD_2


title: N2_ARD_2


title: N2_ARD_4


title: LK0731

description:
SH59Q20_Cell1
miRNA


title: LK0729

description:
SH59Q19_Cell3
miRNA


title: LK0732

description:
SH59Q20_Cell2
miRNA


title: LK0730

description:
SH59Q19_Cell4
miRNA


title: hlh-30_AL_2


title: N2_AL_2


title: LK0727

description:
SH59Q19_Cell1
miRNA


title: LK0735

description:
SH59Q21_Cell1
miRNA


title: N2_ARD_1


title: hlh-30_ARD_1


title: hlh-30_AL_1


title: N2_AL_1


title: N2_ARD_3


title: LK0726

description:
SH59X30_Cell3
miRNA


title: LK0722

description:
SH59Q16_Cell4
miRNA


title: LK0723

description:
SH59Q18_Cell1
miRNA


title: LK0724

description:
SH59Q18_Cell2
miRNA


title: LK0721

description:
SH59Q16_Cell3
miRNA


title: WA09 low3

city: Bar Harbor

first: Christopher

middle: Lee

last: Baker

state: ME

address: 600 Main Street

department: Research

country: USA

institute: The Jackson Laboratory

library_source: genomic

data_processing:
Basecalls performed using CASAVA
Trimmomatic to remove Nextera adapters
Aligned with bwa v.0.7.15
converted to bam using samtools v.0.1.19
peaks called with MACS v.1.4.2
Genome_build: hg19
Supplementary_files_format_and_content: processed files are tab-delimited txt files representing the position of identified ATAC peaks in hg19 coordinates followed by read counts.

molecule: genomic DNA

source_name: human embryonic stem cells

growth_protocol: Human embryonic stem cells (WA09), were maintained as described previously in Reubinoff et al. NatBio. 2000. 18:399-404.

extract_protocol:
Tn5 transposase
Transposase libraries were amplified for 9 cycles using barcoded primers

treatment_protocol: Cells were collected from two FACS populations (GCTM-2highCD9high and GCTM-2midCD9mid)

tag: cell line

tag: cell type

value: human embryonic stem cells

tag: cell surface markers


title: WA09 low1


title: WA09 low2


title: LK0720

description:
SH59Q16_Cell2
miRNA


title: WA09 hi3


title: LK0728

description:
SH59Q19_Cell2
miRNA


title: WA09 hi2


title: LK0719

description:
SH59Q16_Cell1
miRNA


title: WA09 hi1


title: BAT1 shRNA #2 replicate 3

city: Chicago

first: Bakhtiar

last: Yamini

address: 900 E 57th St

department: Department of Surgery

institute: University of Chicago

description: shBAT1_2 rep 3

data_processing:
Illumina Casava1.7 software used for basecalling.
Sequenced reads were trimmed for adaptor sequence, and masked for low-complexity or low-quality sequence, then mapped to GENCODE human v29 whole genome using HISAT2 with default parameters
Raw counts for each gene was calculated with HT-Seq package
Normalized counts for each gene was estimated with DESeq2 software.
Genome_build: GENCODE Human V29
Supplementary_files_format_and_content: Comma seperated CSV files include normalized counts for each gene exported from DESeq2

source_name: BAT1 shRNA #2

growth_protocol: GBM44 cell line was maintained in DMEM/F12 medium supplemented with B27, FGF, EGF, and 10% PS

extract_protocol:
Cells were washed in PBS twice, total RNA was extracted from cells using Trizol reagent followed by DNase treatment and purification and stored at -80oC.
RNA libraries were prepared for sequencing using NEBNext Ultra RNA Library Prep Kit for Illumina.

treatment_protocol: GBM44 cells were infected with pLKO virus expressing Bat1 shRNA or non-targeting control. Cells were selected with puromycis at 5 microgrm / mL for 2 days and cultures for additional 3 days before harvesting

value: glioma cell line

tag: genotype/variation

value: BAT1 knockdown


title: BAT1 shRNA #2 replicate 1

description: shBAT1_2 rep 1


title: LK0718

description:
SH59Q15_Cell4
miRNA


title: BAT1 shRNA #1 replicate 3

description: shBAT1_1 rep 3

source_name: BAT1 shRNA #1


title: LK0714

description:
SH59Q14_Cell4
miRNA


title: BAT1 shRNA #2 replicate 2

description: shBAT1_2 rep 2


title: LK0725

description:
SH59Q18_Cell3
miRNA


title: LK0717

description:
SH59Q15_Cell3
miRNA


title: LK0716

description:
SH59Q15_Cell2
miRNA


title: BAT1 shRNA #1 replicate 2

description: shBAT1_1 rep 2


title: LK0711

description:
SH59Q14_Cell1
miRNA


title: BAT1 shRNA #1 replicate 1

description: shBAT1_1 rep 1


title: LK0715

description:
SH59Q15_Cell1
miRNA


title: Control shRNA replicate 3

description: sh_SCR rep 3

source_name: Control shRNA

value: Control


title: LK0708

description:
SH59Q13_Cell2
miRNA


title: LK0710

description:
SH59X30_Cell2
miRNA


title: LK0712

description:
SH59Q14_Cell2
miRNA


title: LK0706

description:
SH59Q12_Cell4
miRNA


title: Control shRNA replicate 2

description: sh_SCR rep 2


title: Control shRNA replicate 1

description: sh_SCR rep 1


title: LK0705

description:
SH59Q12_Cell3
miRNA


title: LK0703

description:
SH59Q12_Cell1
miRNA


title: LK0704

description:
SH59Q12_Cell2
miRNA


title: mouse epidermis - IMQ scRNAseq

city: irvine

first: Elyse

middle: Noelani

last: Greenberg

state: California

address: 839 medical sciences court, sprague hall rm. 250

institute: UC Irvine

description: single cell RNA-seq run on the chromium 10x system

data_processing:
Raw sequencing data were processed using the 10x Genomics Cell Ranger pipeline (version 2.1.0) to generate FASTQ files and aligned to mm10 genome to gene expression count.
The subsequent data analysis was performed using “Seurat” package and R scripts
Genome_build: mm10

organism: Mus musculus

source_name: primary epidermal cells

growth_protocol: Mouse back skin (male, C57BL/6J, p50) shaved dorsal back skin was treated with or without 1% IMQ for 6 hours. Epidermis was dissociated on ice using 0.25% trypsin for 1 hour. Primary mouse epidermal cells were collected from, dissociated and filtered through 70 um filters and run through FACS to isolate live (DAPI-vioabilitye780-) cells. Freshly sorted cells were resuspended in PBS containing 0.04% BSA at a concentration of 1000 cells/µl.

extract_protocol:
live cells were loaded onto the chromium 10x microfluidic device, where reverse transcription on the single cell level occurs.
Single-cell RNA libraries were prepared according to the Chromium™ Single Cell 3' Reagent Kits v2 User Guide (10x Genomics). Approximately 7,000 cells were loaded on a Chromium single cell Controller instrument (10x Genomics) to generate single cell gel beads in emulsion (GEMs). The barcoded sequencing libraries were constructed using the Chromium Single-Cell 3′ Library Kit (10x Genomics) for enzymatic fragmentation, end-repair, A-tailing, adaptor ligation, ligation cleanup, sample index PCR, and PCR cleanup. Libraries were sequenced with a Hiseq 4000 instrument (Illumina) with a depth of 2,000 median genes per cell. Raw sequencing data were processed using the 10x Genomics Cell Ranger pipeline (version 2.1.0) to generate FASTQ files and aligned to mm10 genome to gene expression count. The subsequent data analysis was performed using “Seurat” package and R scripts. Cells with mitochondrial read rate > 10% were considered as low-quality and filtered out. Normalized and scaled data were clustered using the top significant principal components of highly variable genes. The t-distributed stochastic neighbor embedding (t-SNE) algorithm was used to visualize the resulting clusters. Cluster-specific markers were identified to generate heatmap and feature plots in the identified cell clusters.

value: primary epidermal cells

tag: treatment

value: 6 hr IMQ treated

tag: barcodes

value: CCACTTAT, AACTGGCG, TTGGCATA, GGTAACGC


title: mouse epidermis - control scRNAseq

value: control

value: GTAATCTT, TCCGGAAG, AGTTCGGC, CAGCATCA


title: LK0702

description:
SH59Q11_Cell4
miRNA

value: Lung cancer, pre-operation


title: LK0700

description:
SH59Q11_Cell2
miRNA

value: Male


title: LK0699

description:
SH59Q11_Cell1
miRNA

value: serum


title: LK0698

description:
SH59Q10_Cell4
miRNA

value: Female


title: LK0693

description:
SH59H66_Cell3
miRNA


title: LK0692

description:
SH59H66_Cell2
miRNA


title: LK0713

description:
SH59Q14_Cell3
miRNA


title: LK0691

description:
SH59H66_Cell1
miRNA


title: LK0688

description:
SH59H65_Cell2
miRNA


title: LK0687

description:
SH59H65_Cell1
miRNA


title: LK0689

description:
SH59H65_Cell3
miRNA


title: LK0686

description:
SH59H64_Cell4
miRNA


title: S1594-00899_F1

city: Parma

first: Mirco

last: Govoni

address: Largo Francesco Belloli 11A

department: Global Clinical Development

country: Italy

institute: Chiesi Farmaceutici SpA

hyb_protocol: Labelled cDNA was combined with dimethyl sulfoxide, hybridization buffer and nuclease free water and hybridised onto a Prostate Disease Specific Array (ThermoFisher) for 18hrs at 40oC.  Following hybridization, all arrays were washed using buffers of varying salt concentrations and stained with streptavidin-phycoerythrin conjugate (SAPE) .    All reaction components are contained within the hybridization, wash and stain kit (ThermoFisher).

scan_protocol: The arrays were scanned on the GeneChip scanner system (Thermofisher) using an epiflourescent, confocal microscope.  A solid-state laser contained within the GeneChip system was used to excite fluorophores bound to the hybridized cDNA molecules. The fluorescent values were firstly converted into an electronic signal and then to a numerical value representing the fluorescent intensity.

data_processing: CEL file intensities have been normalised to probeset level using Robust Multichip Average (RMA) consisting background adjustment, quantile normalisation and summarisation pre-processing (Bolstad et al, 2003).

label: Biotin

source_name: Sputum

label_protocol: 3.5 µg of cDNA was first enzymatically fragmented by DNase at 37oC for 30min followed by labelling with a terminal deoxynucleotidyl transferase (TdT) and biotin at 37oC for 60min.  All reaction components are contained within the  Encore Biotin Module (NuGEN Inc).

extract_protocol: RNA was extracted from the blood samples using the PAXgene Blood RNA Kit on the automated QIAsymphony SP module, whilst the sputum samples were extracted using the RNA Stat 60 extraction method followed by Qiagen RNeasy Minelute Cleanup Kit.

tag: patient id

tag: patient age (years)

value: High dose

tag: time point

value: Post-dose

value: Sputum


title: S1594-00561_F1


title: LK0685

description:
SH59H64_Cell3
miRNA


title: S1594-00947_F1

value: Placebo


title: LK0684

description:
SH59H64_Cell2
miRNA


title: S1594-00468_F1

value: Mid dose


title: S1594-01009_F1


title: S1594-00390_F1


title: S1594-00569_F1


title: S1594-00681_F1


title: S1594-00761_F1


title: S1594-01035_F1_h


title: S1594-00765_F1


title: S1594-00069_F1


title: LK0695

description:
SH59Q10_Cell1
miRNA


title: S1594-00123_F1


title: LK0683

description:
SH59H64_Cell1
miRNA


title: LK0681

description:
SH59H63_Cell3
miRNA


title: LK0678

description:
SH59H61_Cell4
miRNA


title: LK0679

description:
SH59H63_Cell1
miRNA


title: LK0682

description:
SH59H63_Cell4
miRNA


title: LK0680

description:
SH59H63_Cell2
miRNA


title: S1594-00039_H

source_name: Blood

value: Blood


title: LK0676

description:
SH59H61_Cell2
miRNA


title: LK0677

description:
SH59H61_Cell3
miRNA


title: LK0674

description:
SH59H60_Cell4
miRNA


title: LK0675

description:
SH59H61_Cell1
miRNA


title: LK0673

description:
SH59H60_Cell3
miRNA


title: S1594-01062_F1


title: S1594-01061_F1

value: Pre-dose


title: S1594-00330_F1


title: S1594-01058_F1

source_name: High dose_Pre-dose_Sputum


title: LK0668

description:
SH59H58_Cell2
miRNA


title: LK0671

description:
SH59H60_Cell1
miRNA


title: S1594-01060_F1

source_name: High dose_Post-dose_Sputum


title: S1594-01038_F1


title: S1594-01032_F1


title: S1594-01019_F1


title: LK0667

description:
SH59H58_Cell1
miRNA


title: S1594-01028_F1

source_name: Mid dose_Pre-dose_Sputum


title: S1594-01030_F1

source_name: Mid dose_Post-dose_Sputum


title: S1594-01006_F1


title: S1594-01016_F1


title: S1594-01036_F1


title: LK0665

description:
SH59H57_Cell3
miRNA


title: LK0672

description:
SH59H60_Cell2
miRNA


title: LK0666

description:
SH59H57_Cell4
miRNA


title: S1594-01012_F1_h


title: S1594-01004_F1

source_name: Mid dose_NA_Sputum

extract_protocol: RNA was extracted from the blood samples using the PAXgene™ Blood RNA Kit on the automated QIAsymphony SP module, whilst the sputum samples were extracted using the RNA Stat 60 extraction method followed by Qiagen RNeasy Minelute Cleanup Kit.


title: S1594-01003_F1


title: LK0661

description:
SH59H56_Cell3
miRNA


title: LK0660

description:
SH59H56_Cell2
miRNA


title: LK0663

description:
SH59H57_Cell1
miRNA


title: LK0662

description:
SH59H56_Cell4
miRNA


title: S1594-00999_F1

source_name: Mid dose_Pre-dose_Blood


title: LK0658

description:
SH59H55_Cell4
miRNA


title: S1594-00993_F1

source_name: High dose_Post-dose_Blood


title: S1594-00997_F1


title: S1594-00995_F1


title: LK0664

description:
SH59H57_Cell2
miRNA


title: LK0657

description:
SH59H55_Cell3
miRNA


title: LK0655

description:
SH59H55_Cell1
miRNA


title: LK0654

description:
SH59H54_Cell4
miRNA


title: LK0652

description:
SH59X30_Cell1
miRNA


title: LK0650

description:
SH59H53_Cell4
miRNA


title: LK0651

description:
SH59H54_Cell1
miRNA


title: LK0653

description:
SH59H54_Cell3
miRNA


title: LK0670

description:
SH59H58_Cell4
miRNA


title: S1594-00994_F1

source_name: High dose_Pre-dose_Blood


title: LK0649

description:
SH59H53_Cell3
miRNA

source_name: Serum


title: LK0646

description:
SH59H52_Cell4
miRNA


title: LK0647

description:
SH59H53_Cell1
miRNA


title: S1594-00998_F1

source_name: Mid dose_Post-dose_Blood


title: S1594-00990_F1


title: LK0644

description:
SH59H52_Cell2
miRNA


title: S1594-00979_F1


title: LK0645

description:
SH59H52_Cell3
miRNA


title: S1594-00983_F1


title: S1594-00981_F1


title: S1594-00978_F1


title: S1594-00992_F1


title: S1594-00988_F1


title: S1594-00989_F1


title: S1594-00975_F1


title: S1594-00977_F1


title: S1594-00969_F1


title: S1594-00976_F1


title: LK0643

description:
SH59H52_Cell1
miRNA


title: S1594-00971_F1


title: S1594-00973_F1


title: LK0639

description:
SH59H50_Cell1
miRNA


title: LK0641

description:
SH59H50_Cell3
miRNA


title: LK0642

description:
SH59H50_Cell4
miRNA


title: LK0640

description:
SH59H50_Cell2
miRNA


title: LK0638

description:
SH59H49_Cell4
miRNA


title: LK0637

description:
SH59H49_Cell3
miRNA


title: S1594-00967_F1


title: S1594-00965_F1


title: LK0633

description:
SH59H47_Cell3
miRNA


title: LK0631

description:
SH59H47_Cell1
miRNA


title: LK0635

description:
SH59H49_Cell1
miRNA


title: LK0636

description:
SH59H49_Cell2
miRNA


title: S1594-00966_F1


title: LK0630

description:
SH59H46_Cell4
miRNA


title: LK0628

description:
SH59H46_Cell2
miRNA


title: LK0634

description:
SH59H47_Cell4
miRNA


title: LK0629

description:
SH59H46_Cell3
miRNA


title: S1594-00962_F1


title: S1594-00963_F1

source_name: Mid dose_NA_Blood


title: S1594-00956_F1


title: LK0627

description:
SH59H46_Cell1
miRNA


title: S1594-00959_F1


title: S1594-00952_F2


title: S1594-00964_F1


title: S1594-00961_F1


title: S1594-00955_F2


title: LK0632

description:
SH59H47_Cell2
miRNA


title: LK0626

description:
SH59H45_Cell4
miRNA


title: LK0624

description:
SH59H45_Cell2
miRNA


title: S1594-00940_F1


title: S1594-00942_F1


title: S1594-00951_F1


title: S1594-00944_F1


title: LK0622

description:
SH59H44_Cell4
miRNA


title: S1594-00935_F1


title: S1594-00932_F1


title: S1594-00927_F1


title: S1594-00924_F1


title: LK0620

description:
SH59H44_Cell2
miRNA


title: LK0618

description:
SH59H41_Cell4
miRNA


title: LK0616

description:
SH59H41_Cell2
miRNA


title: LK0612

description:
SH59H40_Cell2
miRNA


title: LK0614

description:
SH59H40_Cell4
miRNA


title: LK0623

description:
SH59H45_Cell1
miRNA


title: LK0613

description:
SH59H40_Cell3
miRNA


title: LK0619

description:
SH59H44_Cell1
miRNA


title: LK0617

description:
SH59H41_Cell3
miRNA


title: S1594-00923_F1


title: LK0611

description:
SH59H40_Cell1
miRNA


title: LK0610

description:
SH59H39_Cell4
miRNA


title: S1594-00916_F1


title: S1594-00920_F1


title: LK0608

description:
SH59H39_Cell2
miRNA


title: S1594-00912_F1


title: S1594-00907_F2


title: S1594-00915_F1


title: LK0609

description:
SH59H39_Cell3
miRNA


title: LK0607

description:
SH59H39_Cell1
miRNA


title: S1594-00911_F1


title: S1594-00904_F2


title: LK0606

description:
SH59H38_Cell4
miRNA


title: LK0605

description:
SH59H38_Cell3
miRNA


title: LK0604

description:
SH59H38_Cell2
miRNA


title: S1594-00919_F1


title: S1594-00913_F1


title: S1594-00908_F1


title: S1594-00900_F1


title: S1594-00903_F1


title: S1594-00896_F1


title: LK0602

description:
SH59H37_Cell4
miRNA


title: S1594-00891_F1


title: S1594-00893_F1


title: S1594-00886_F1


title: S1594-00877_F1


title: S1594-00875_F1


title: S1594-00874_F1


title: LK0600

description:
SH59H37_Cell2
miRNA


title: LK0601

description:
SH59H37_Cell3
miRNA


title: LK0598

description:
SH59H36_Cell4
miRNA


title: LK0597

description:
SH59H36_Cell3
miRNA


title: LK0599

description:
SH59H37_Cell1
miRNA


title: LK0595

description:
SH59H36_Cell1
miRNA


title: S1594-00873_F1


title: LK0596

description:
SH59H36_Cell2
miRNA


title: S1594-00870_F1


title: LK0592

description:
SH59H35_Cell2
miRNA


title: S1594-00872_F1


title: LK0625

description:
SH59H45_Cell3
miRNA


title: S1594-00871_F1


title: S1594-00869_F1


title: LK0590

description:
SH59H34_Cell4
miRNA


title: LK0591

description:
SH59H35_Cell1
miRNA


title: S1594-00866_F1


title: LK0589

description:
SH59H34_Cell3
miRNA


title: LK0587

description:
SH59H34_Cell1
miRNA


title: LK0586

description:
SH59X29_Cell3
miRNA


title: LK0588

description:
SH59H34_Cell2
miRNA


title: LK0585

description:
SH59H33_Cell3
miRNA


title: S1594-00868_F1


title: S1594-00864_F1


title: S1594-00860_F1


title: LK0579

description:
SH59H32_Cell1
miRNA


title: LK0583

description:
SH59H33_Cell1
miRNA


title: LK0580

description:
SH59H32_Cell2
miRNA


title: LK0578

description:
SH59H31_Cell4
miRNA


title: S1594-00859_F1


title: LK0584

description:
SH59H33_Cell2
miRNA


title: S1594-00861_F1


title: S1594-00857_F1


title: S1594-00867_F1


title: S1594-00862_F1


title: LK0576

description:
SH59H31_Cell2
miRNA


title: S1594-00856_F1


title: LK0575

description:
SH59H31_Cell1
miRNA


title: LK0574

description:
SH59H30_Cell4
miRNA


title: S1594-00854_F1


title: S1594-00853_F1


title: LK0573

description:
SH59H30_Cell3
miRNA


title: LK0572

description:
SH59H30_Cell2
miRNA


title: S1594-00865_F1


title: S1594-00858_F1


title: S1594-00863_F1


title: LK0570

description:
SH59H28_Cell4
miRNA


title: S1594-00855_h


title: S1594-00848_F1


title: S1594-00852_F1


title: S1594-00849_F1


title: LK0567

description:
SH59H28_Cell1
miRNA


title: S1594-00851_F1


title: LK0566

description:
SH59H27_Cell4
miRNA


title: LK0562

description:
SH59H26_Cell4
miRNA


title: LK0563

description:
SH59H27_Cell1
miRNA


title: LK0565

description:
SH59H27_Cell3
miRNA


title: LK0561

description:
SH59H26_Cell3
miRNA


title: S1594-00845_F1


title: S1594-00844_F1


title: LK0569

description:
SH59H28_Cell3
miRNA


title: S1594-00841_F1


title: S1594-00846_F1


title: S1594-00842_F1


title: S1594-00843_F1


title: LK0560

description:
SH59H26_Cell2
miRNA


title: LK0568

description:
SH59H28_Cell2
miRNA


title: LK0559

description:
SH59H26_Cell1
miRNA


title: LK0558

description:
SH59H25_Cell4
miRNA


title: S1594-00847_F1


title: LK0557

description:
SH59H25_Cell3
miRNA


title: S1594-00837_F1


title: S1594-00840_F1


title: LK0556

description:
SH59H25_Cell2
miRNA


title: S1594-00834_F1


title: LK0554

description:
SH59H24_Cell4
miRNA


title: S1594-00838_F1


title: LK0553

description:
SH59H24_Cell3
miRNA


title: LK0552

description:
SH59H24_Cell2
miRNA


title: LK0550

description:
SH59H23_Cell4
miRNA


title: LK0549

description:
SH59H23_Cell3
miRNA


title: LK0555

description:
SH59H25_Cell1
miRNA


title: LK0551

description:
SH59H24_Cell1
miRNA


title: S1594-00839_F1


title: S1594-00835_F1


title: S1594-00832_F1


title: LK0548

description:
SH59H23_Cell2
miRNA


title: LK0546

description:
SH59H22_Cell4
miRNA


title: LK0547

description:
SH59H23_Cell1
miRNA


title: S1594-00833_F1


title: LK0545

description:
SH59H22_Cell3
miRNA


title: S1594-00831_F1


title: S1594-00830_F1


title: S1594-00827_F1


title: S1594-00828_F1


title: S1594-00824_F1


title: S1594-00822_F1


title: LK0543

description:
SH59H22_Cell1
miRNA


title: LK0544

description:
SH59H22_Cell2
miRNA


title: S1594-00826_F1


title: LK0542

description:
SH59H20_Cell4
miRNA


title: LK0540

description:
SH59H20_Cell2
miRNA


title: S1594-00823_F1


title: LK0541

description:
SH59H20_Cell3
miRNA


title: LK0536

description:
SH59H19_Cell2
miRNA


title: LK0535

description:
SH59H19_Cell1
miRNA


title: LK0537

description:
SH59H19_Cell3
miRNA


title: LK0534

description:
SH59H18_Cell4
miRNA


title: LK0533

description:
SH59H18_Cell3
miRNA


title: S1594-00825_F1


title: S1594-00850_F1


title: LK0532

description:
SH59H18_Cell2
miRNA


title: S1594-00821_F1


title: LK0531

description:
SH59H18_Cell1
miRNA


title: S1594-00819_F1


title: S1594-00817_F1


title: S1594-00816_F1


title: S1594-00818_F1


title: LK0538

description:
SH59H19_Cell4
miRNA


title: S1594-00811_F1


title: S1594-00812_F1


title: LK0530

description:
SH59H17_Cell4
miRNA


title: S1594-00820_F1


title: S1594-00814_F1


title: S1594-00810_F1


title: S1594-00809_F1


title: LK0529

description:
SH59H17_Cell3
miRNA


title: S1594-00805_F1


title: S1594-00815_F1


title: S1594-00808_F1


title: LK0527

description:
SH59H17_Cell1
miRNA


title: LK0528

description:
SH59H17_Cell2
miRNA


title: LK0526

description:
SH59H16_Cell4
miRNA


title: S1594-00803_F1


title: LK0525

description:
SH59H16_Cell3
miRNA


title: LK0524

description:
SH59H16_Cell2
miRNA


title: LK0523

description:
SH59H16_Cell1
miRNA


title: LK0522

description:
SH59H14_Cell4
miRNA


title: LK0519

description:
SH59H14_Cell1
miRNA


title: LK0520

description:
SH59H14_Cell2
miRNA


title: LK0521

description:
SH59H14_Cell3
miRNA


title: LK0515

description:
SH59H11_Cell1
miRNA


title: S1594-00800_F1


title: S1594-00804_F1


title: S1594-00802_F1


title: S1594-00797_F1


title: S1594-00801_F1


title: LK0513

description:
SH59H10_Cell3
miRNA


title: S1594-00795_F2


title: S1594-00796_F2


title: S1594-00791_F2


title: S1594-00789_F1


title: S1594-00798_F1


title: S1594-00787_F1


title: LK0518

description:
SH59H11_Cell4
miRNA


title: LK0512

description:
SH59H10_Cell2
miRNA


title: LK0516

description:
SH59H11_Cell2
miRNA


title: S1594-00788_F1


title: LK0517

description:
SH59X29_Cell2
miRNA


title: S1594-00786_F1


title: S1594-00792_F2


title: S1594-00793_F2


title: S1594-00799_F1


title: S1594-00790_F1


title: LK0511

description:
SH59H10_Cell1
miRNA


title: LK0577

description:
SH59H31_Cell3
miRNA


title: LK0514

description:
SH59H10_Cell4
miRNA


title: S1594-00785_F1


title: LK0509

description:
SH59H09_Cell3
miRNA


title: LK0507

description:
SH59H09_Cell1
miRNA


title: LK0508

description:
SH59H09_Cell2
miRNA


title: S1594-00784_F1


title: LK0506

description:
SH59H06_Cell4
miRNA


title: S1594-00782_F1


title: LK0505

description:
SH59H06_Cell3
miRNA


title: S1594-00781_F1


title: LK0510

description:
SH59H09_Cell4
miRNA


title: LK0503

description:
SH59H06_Cell1
miRNA


title: LK0504

description:
SH59H06_Cell2
miRNA


title: S1594-00780_F1


title: S1594-00783_F1


title: LK0502

description:
SH59H04_Cell4
miRNA


title: S1594-00776_F1


title: LK0500

description:
SH59H04_Cell2
miRNA


title: LK0501

description:
SH59H04_Cell3
miRNA


title: LK0498

description:
SH59H02_Cell4
miRNA


title: LK0499

description:
SH59H04_Cell1
miRNA


title: LK0497

description:
SH59H02_Cell3
miRNA


title: LK0495

description:
SH59H02_Cell1
miRNA


title: S1594-00775_F1


title: LK0496

description:
SH59H02_Cell2
miRNA


title: S1594-00779_F1


title: S1594-00767_F1


title: LK0493

description:
SH59F36_Cell3
miRNA


title: LK0492

description:
SH59F36_Cell2
miRNA


title: S1594-00758_F1


title: S1594-00756_F1


title: S1594-00766_F1


title: S1594-00762_F1


title: S1594-00752_F1


title: S1594-00754_F1


title: LK0491

description:
SH59F36_Cell1
miRNA


title: LK0490

description:
SH59F35_Cell4
miRNA


title: LK0489

description:
SH59F35_Cell3
miRNA


title: S1594-00750_F1


title: S1594-00751_F1


title: S1594-00749_F1


title: LK0494

description:
SH59F36_Cell4
miRNA


title: LK0488

description:
SH59F35_Cell2
miRNA


title: LK0487

description:
SH59F35_Cell1
miRNA


title: S1594-00744_F1


title: S1594-00729_F1


title: LK0486

description:
SH59F33_Cell4
miRNA


title: S1594-00731_F1


title: LK0483

description:
SH59F33_Cell1
miRNA


title: LK0484

description:
SH59F33_Cell2
miRNA


title: S1594-00724_F1


title: LK0485

description:
SH59F33_Cell3
miRNA


title: S1594-00720_F1


title: S1594-00717_F1


title: LK0482

description:
SH59F32_Cell4
miRNA


title: LK0481

description:
SH59F32_Cell3
miRNA


title: LK0480

description:
SH59F32_Cell2
miRNA


title: LK0479

description:
SH59F32_Cell1
miRNA


title: S1594-00714_F1


title: S1594-00711_F1


title: S1594-00710_F1


title: S1594-00702_F1


title: LK0477

description:
SH59F31_Cell3
miRNA


title: S1594-00701_F1


title: S1594-00705_F1


title: S1594-00716_F1


title: S1594-00722_F1


title: LK0478

description:
SH59F31_Cell4
miRNA


title: LK0475

description:
SH59F31_Cell1
miRNA


title: LK0474

description:
SH59F30_Cell4
miRNA


title: LK0470

description:
SH59F29_Cell4
miRNA


title: LK0476

description:
SH59F31_Cell2
miRNA


title: LK0472

description:
SH59F30_Cell2
miRNA


title: LK0473

description:
SH59F30_Cell3
miRNA


title: LK0471

description:
SH59F30_Cell1
miRNA


title: LK0469

description:
SH59F29_Cell3
miRNA


title: LK0467

description:
SH59F29_Cell1
miRNA


title: S1594-00699_F1


title: S1594-00697_F1


title: LK0465

description:
SH59F28_Cell3
miRNA


title: S1594-00691_F1


title: S1594-00723_F1


title: LK0459

description:
SH59F27_Cell1
miRNA


title: LK0460

description:
SH59F27_Cell2
miRNA


title: S1594-00686_F1


title: S1594-00694_F1


title: S1594-00675_F1


title: LK0458

description:
SH59F26_Cell4
miRNA


title: LK0457

description:
SH59F26_Cell3
miRNA


title: S1594-00688_F1


title: LK0468

description:
SH59F29_Cell2
miRNA


title: S1594-00678_F1


title: LK0455

description:
SH59F26_Cell1
miRNA


title: LK0456

description:
SH59F26_Cell2
miRNA


title: S1594-00687_F1


title: LK0454

description:
SH59F25_Cell4
miRNA


title: S1594-00674_F1


title: S1594-00677_F1


title: S1594-00668_F1


title: S1594-00672_F1


title: S1594-00669_F1


title: S1594-00670_F1


title: S1594-00665_F1


title: LK0453

description:
SH59F25_Cell3
miRNA


title: S1594-00647_F1


title: LK0452

description:
SH59F25_Cell2
miRNA


title: S1594-00646_F1


title: LK0451

description:
SH59F25_Cell1
miRNA


title: S1594-00650_F1


title: LK0449

description:
SH59F24_Cell3
miRNA


title: LK0446

description:
SH59F23_Cell4
miRNA


title: LK0447

description:
SH59F24_Cell1
miRNA


title: LK0448

description:
SH59F24_Cell2
miRNA


title: LK0445

description:
SH59F23_Cell3
miRNA


title: LK0444

description:
SH59F23_Cell2
miRNA


title: LK0450

description:
SH59F24_Cell4
miRNA


title: LK0441

description:
SH59F22_Cell3
miRNA


title: LK0442

description:
SH59F22_Cell4
miRNA


title: S1594-00648_F1


title: LK0440

description:
SH59F22_Cell2
miRNA


title: LK0439

description:
SH59F22_Cell1
miRNA


title: S1594-00636_F1


title: S1594-00643_F1


title: LK0438

description:
SH59F21_Cell4
miRNA


title: S1594-00630_F1


title: S1594-00632_F1


title: S1594-00644_F1


title: S1594-00638_F1


title: S1594-00629_F1


title: S1594-00641_F1


title: S1594-00631_F1


title: S1594-00634_F1


title: S1594-00642_F1


title: LK0443

description:
SH59F23_Cell1
miRNA


title: S1594-00628_F1


title: LK0437

description:
SH59F21_Cell3
miRNA


title: S1594-00637_F1


title: S1594-00635_F1


title: LK0435

description:
SH59F21_Cell1
miRNA


title: LK0436

description:
SH59F21_Cell2
miRNA


title: S1594-00623_F1


title: S1594-00624_F1


title: LK0434

description:
SH59F20_Cell4
miRNA


title: S1594-00645_F1


title: LK0432

description:
SH59F20_Cell2
miRNA


title: LK0433

description:
SH59F20_Cell3
miRNA


title: S1594-00633_F1


title: LK0430

description:
SH59F12_Cell4
miRNA


title: LK0429

description:
SH59F12_Cell3
miRNA


title: LK0428

description:
SH59F12_Cell2
miRNA


title: LK0425

description:
SH59F11_Cell3
miRNA


title: S1594-00621_F1


title: LK0426

description:
SH59F11_Cell4
miRNA


title: LK0424

description:
SH59F11_Cell2
miRNA


title: S1594-00618_F1


title: S1594-00622_F1


title: LK0427

description:
SH59F12_Cell1
miRNA


title: S1594-00620_F1


title: S1594-00617_F1


title: LK0423

description:
SH59F11_Cell1
miRNA


title: LK0419

description:
SH59F10_Cell1
miRNA


title: LK0422

description:
SH59F10_Cell4
miRNA


title: LK0418

description:
SH59F08_Cell4
miRNA


title: S1594-00613_F1


title: S1594-00615_F1


title: S1594-00616_F1


title: LK0416

description:
SH59F08_Cell2
miRNA


title: LK0417

description:
SH59F08_Cell3
miRNA


title: S1594-00610_F1


title: S1594-00614_F1


title: S1594-00619_F1


title: S1594-00609_F1


title: S1594-00606_F1


title: LK0415

description:
SH59F08_Cell1
miRNA


title: S1594-00604_F1


title: S1594-00603_F1


title: LK0414

description:
SH59F07_Cell4
miRNA


title: LK0412

description:
SH59F07_Cell2
miRNA


title: LK0413

description:
SH59F07_Cell3
miRNA


title: S1594-00602_F1


title: LK0411

description:
SH59F07_Cell1
miRNA


title: S1594-00601_F1


title: LK0410

description:
SH59F06_Cell4
miRNA


title: LK0406

description:
SH59F05_Cell4
miRNA


title: LK0407

description:
SH59F06_Cell1
miRNA


title: LK0404

description:
SH59F05_Cell2
miRNA


title: LK0409

description:
SH59F06_Cell3
miRNA


title: S1594-00605_F1


title: LK0403

description:
SH59F05_Cell1
miRNA


title: S1594-00596_F2


title: LK0401

description:
SH59F04_Cell3
miRNA


title: S1594-00597_F2


title: LK0402

description:
SH59F04_Cell4
miRNA


title: LK0399

description:
SH59F04_Cell1
miRNA


title: LK0398

description:
SH59F03_Cell4
miRNA


title: LK0396

description:
SH59F03_Cell2
miRNA


title: LK0405

description:
SH59F05_Cell3
miRNA


title: S1594-00595_F2


title: S1594-00593_F2


title: S1594-00592_F2


title: S1594-00584_F1


title: S1594-00576_F1


title: S1594-00577_F1


title: LK0392

description:
SH59F02_Cell2
miRNA


title: LK0394

description:
SH59F02_Cell4
miRNA


title: S1594-00570_F1


title: S1594-00572_F1


title: S1594-00581_F1


title: S1594-00564_F1


title: S1594-00566_F1


title: S1594-00562_F1


title: S1594-00558_F1


title: S1594-00547_F1


title: LK0390

description:
SH58L27_Cell4
miRNA


title: LK0395

description:
SH59F03_Cell1
miRNA


title: S1594-00573_F1


title: LK0389

description:
SH58L27_Cell3
miRNA


title: LK0388

description:
SH58L27_Cell2
miRNA


title: LK0393

description:
SH59F02_Cell3
miRNA


title: S1594-00580_F1


title: LK0385

description:
SH58L25_Cell3
miRNA


title: LK0387

description:
SH58L27_Cell1
miRNA


title: LK0386

description:
SH5YL18_Cell4
miRNA


title: LK0380

description:
SH58L22_Cell2
miRNA


title: LK0377

description:
SH58L19_Cell3
miRNA


title: LK0378

description:
SH58L19_Cell4
miRNA


title: LK0384

description:
SH58L25_Cell2
miRNA


title: LK0382

description:
SH5YL18_Cell3
miRNA


title: LK0374

description:
SH58L18_Cell4
miRNA


title: LK0381

description:
SH58L22_Cell3
miRNA


title: S1594-00548_F1


title: LK0376

description:
SH58L19_Cell2
miRNA


title: S1594-00543_F1


title: S1594-00544_F1


title: S1594-00545_F1


title: LK0372

description:
SH58L18_Cell2
miRNA


title: LK0373

description:
SH58L18_Cell3
miRNA


title: S1594-00533_F1


title: S1594-00540_F1


title: S1594-00537_F1


title: S1594-00538_F1


title: S1594-00539_F1


title: S1594-00530_F1


title: S1594-00531_F1


title: S1594-00528_F1


title: LK0371

description:
SH58L18_Cell1
miRNA


title: S1594-00542_F1


title: S1594-00534_F1


title: S1594-00535_F1


title: S1594-00541_F1


title: S1594-00529_F1


title: S1594-00532_F1


title: S1594-00527_F1


title: LK0367

description:
SH58L17_Cell1
miRNA


title: LK0368

description:
SH5X605_Cell3
miRNA


title: LK0369

description:
SH5X605_Cell4
miRNA


title: LK0370

description:
SH5YL18_Cell1
miRNA


title: LK0365

description:
SH58L16_Cell3
miRNA


title: LK0366

description:
SH58L16_Cell4
miRNA


title: LK0364

description:
SH58L16_Cell2
miRNA


title: LK0362

description:
SH58L12_Cell4
miRNA


title: LK0358

description:
SH5X604_Cell4
miRNA


title: LK0356

description:
SH58L11_Cell2
miRNA


title: S1594-00523_F1


title: LK0360

description:
SH58L12_Cell2
miRNA


title: LK0361

description:
SH5X605_Cell1
miRNA


title: LK0357

description:
SH58L11_Cell3
miRNA


title: S1594-00526_F1


title: LK0355

description:
SH58L11_Cell1
miRNA


title: LK0354

description:
SH5X604_Cell3
miRNA


title: S1594-00521_F1


title: S1594-00520_F1


title: S1594-00522_F1


title: S1594-00515_F1


title: S1594-00513_F1


title: S1594-00514_F1


title: LK0353

description:
SH58L10_Cell3
miRNA


title: S1594-00519_F1


title: LK0352

description:
SH58L10_Cell2
miRNA


title: S1594-00512_F1


title: S1594-00510_F1


title: S1594-00511_F1


title: S1594-00518_F1


title: S1594-00508_F1


title: LK0351

description:
SH58L10_Cell1
miRNA


title: S1594-00507_F1


title: S1594-00516_F1


title: S1594-00505_F1


title: S1594-00506_F1


title: LK0349

description:
SH58L09_Cell3
miRNA


title: LK0350

description:
SH58L09_Cell4
miRNA


title: LK0345

description:
SH58L08_Cell3
miRNA


title: LK0348

description:
SH58L09_Cell2
miRNA


title: LK0344

description:
SH58L08_Cell2
miRNA


title: LK0347

description:
SH58L09_Cell1
miRNA


title: LK0342

description:
SH58L04_Cell4
miRNA


title: LK0343

description:
SH58L08_Cell1
miRNA


title: LK0339

description:
SH58L04_Cell1
miRNA


title: LK0338

description:
SH58L03_Cell4
miRNA


title: LK0336

description:
SH58L03_Cell2
miRNA


title: S1594-00500_F1


title: S1594-00502_F1


title: S1594-00498_F1


title: S1594-00504_F1


title: S1594-00501_F1


title: S1594-00497_F1


title: LK0335

description:
SH58L03_Cell1
miRNA


title: LK0337

description:
SH58L03_Cell3
miRNA


title: LK0334

description:
SH58L02_Cell4
miRNA


title: LK0331

description:
SH58L02_Cell1
miRNA


title: LK0332

description:
SH58L02_Cell2
miRNA


title: LK0328

description:
SH58L01_Cell2
miRNA


title: S1594-00494_F1


title: LK0333

description:
SH58L02_Cell3
miRNA


title: S1594-00491_F1


title: LK0325

description:
SH5X604_Cell2
miRNA


title: S1594-00487_F1


title: S1594-00492_F1


title: S1594-00495_F1


title: S1594-00484_F1


title: S1594-00486_F1


title: S1594-00490_F1


title: S1594-00493_F1


title: S1594-00485_F1


title: S1594-00488_F1


title: LK0322

description:
SH5X604_Cell1
miRNA


title: S1594-00482_F1


title: S1594-00483_F1


title: S1594-00480_F1


title: S1594-00478_F1


title: S1594-00481_F1


title: LK0327

description:
SH58L01_Cell1
miRNA


title: LK0320

description:
SH57Y63_Cell2
miRNA


title: LK0321

description:
SH5X603_Cell4
miRNA


title: LK0326

description:
SH57Y66_Cell4
miRNA


title: LK0319

description:
SH57Y63_Cell1
miRNA


title: S1594-00477_F1


title: LK0318

description:
SH57Y60_Cell4
miRNA


title: S1594-00476_F1


title: LK0324

description:
SH57Y66_Cell2
miRNA


title: S1594-00475_F1


title: LK0317

description:
SH5X603_Cell3
miRNA


title: S1594-00474_F1


title: S1594-00473_h


title: LK0315

description:
SH5X603_Cell2
miRNA


title: LK0312

description:
SH57Y59_Cell2
miRNA


title: LK0313

description:
SH57Y59_Cell3
miRNA


title: LK0311

description:
SH57Y59_Cell1
miRNA


title: LK0310

description:
SH5X602_Cell4
miRNA


title: S1594-00472_F1


title: LK0308

description:
SH57Y57_Cell2
miRNA


title: LK0309

description:
SH57Y57_Cell3
miRNA


title: LK0307

description:
SH57Y57_Cell1
miRNA


title: LK0306

description:
SH57Y56_Cell4
miRNA


title: LK0305

description:
SH57Y56_Cell3
miRNA


title: LK0316

description:
SH57Y60_Cell2
miRNA


title: LK0314

description:
SH5X603_Cell1
miRNA


title: LK0303

description:
SH57Y56_Cell1
miRNA


title: S1594-00470_F1


title: LK0304

description:
SH57Y56_Cell2
miRNA


title: S1594-00464_F1


title: S1594-00471_F1


title: S1594-00467_F1


title: LK0302

description:
SH57Y55_Cell4
miRNA


title: S1594-00466_F1


title: LK0301

description:
SH57Y55_Cell3
miRNA


title: S1594-00449_F1


title: S1594-00450_F1


title: S1594-00446_F1


title: S1594-00443_F1


title: S1594-00448_F1


title: S1594-00447_F1


title: LK0299

description:
SH57Y55_Cell1
miRNA


title: LK0300

description:
SH57Y55_Cell2
miRNA


title: S1594-00442_F1


title: S1594-00445_F1


title: LK0296

description:
SH57Y54_Cell2
miRNA


title: S1594-00435_F1


title: S1594-00439_F1


title: LK0293

description:
SH57Y51_Cell3
miRNA


title: LK0295

description:
SH57Y54_Cell1
miRNA


title: LK0294

description:
SH57Y51_Cell4
miRNA


title: LK0292

description:
SH57Y51_Cell2
miRNA


title: S1594-00434_F1


title: S1594-00431_F1


title: LK0291

description:
SH57Y51_Cell1
miRNA


title: LK0290

description:
SH59X34_Cell1
miRNA


title: LK0289

description:
SH59X33_Cell4
miRNA


title: S1594-00430_F1


title: S1594-00433_F1


title: LK0288

description:
SH59X33_Cell3
miRNA


title: S1594-00429_F1


title: LK0283

description:
SH59X32_Cell3
miRNA


title: S1594-00428_F1


title: LK0285

description:
SH59X33_Cell1
miRNA


title: LK0284

description:
SH5X602_Cell3
miRNA


title: LK0281

description:
SH59X32_Cell1
miRNA


title: LK0280

description:
SH59Q49_Cell4
miRNA


title: LK0286

description:
SH59X33_Cell2
miRNA


title: S1594-00404_F1


title: S1594-00425_F1


title: S1594-00427_F1


title: S1594-00403_F1


title: S1594-00392_F1


title: S1594-00385_F1


title: S1594-00377_F1


title: LK0279

description:
SH59Q49_Cell3
miRNA


title: S1594-00375_F1


title: S1594-00374_F2


title: S1594-00400_F1


title: LK0278

description:
SH59Q49_Cell2
miRNA


title: LK0270

description:
SH59Q47_Cell2
miRNA


title: LK0277

description:
SH59Q49_Cell1
miRNA


title: LK0271

description:
SH59Q47_Cell3
miRNA


title: LK0274

description:
SH59Q48_Cell2
miRNA


title: LK0269

description:
SH59Q47_Cell1
miRNA


title: LK0272

description:
SH59Q47_Cell4
miRNA


title: S1594-00363_F1


title: S1594-00362_F1


title: S1594-00367_F1


title: S1594-00503_F1


title: S1594-00373_F1


title: S1594-00361_F1


title: LK0275

description:
SH59Q48_Cell3
miRNA


title: LK0268

description:
SH59Q46_Cell4
miRNA


title: LK0267

description:
SH59Q46_Cell3
miRNA


title: S1594-00364_F1


title: S1594-00370_F1


title: S1594-00341_F1


title: S1594-00360_F1


title: S1594-00342_F1


title: S1594-00340_F1


title: LK0266

description:
SH59Q46_Cell2
miRNA


title: LK0261

description:
SH59Q45_Cell1
miRNA


title: LK0262

description:
SH59Q45_Cell2
miRNA


title: LK0263

description:
SH59Q45_Cell3
miRNA


title: LK0264

description:
SH59Q45_Cell4
miRNA


title: S1594-00333_F1


title: LK0265

description:
SH59Q46_Cell1
miRNA


title: S1594-00328_F2


title: S1594-00331_F1


title: S1594-00332_F1


title: LK0260

description:
SH59Q44_Cell4
miRNA


title: LK0259

description:
SH59Q44_Cell3
miRNA


title: S1594-00326_F1


title: S1594-00321_F1


title: S1594-00322_F1


title: S1594-00327_F1


title: LK0256

description:
SH59Q42_Cell4
miRNA


title: LK0252

description:
SH59Q41_Cell4
miRNA


title: LK0253

description:
SH59Q42_Cell1
miRNA


title: LK0255

description:
SH59Q42_Cell3
miRNA


title: S1594-00318_F1


title: LK0258

description:
SH59Q44_Cell2
miRNA


title: LK0249

description:
SH59Q41_Cell1
miRNA


title: LK0250

description:
SH5X602_Cell2
miRNA


title: S1594-00309_F1


title: LK0246

description:
SH59Q40_Cell2
miRNA


title: LK0245

description:
SH59Q40_Cell1
miRNA


title: S1594-00307_F1


title: S1594-00308_F1


title: S1594-00268_F1


title: S1594-00306_F1


title: S1594-00305_F1


title: LK0244

description:
SH59Q39_Cell4
miRNA


title: LK0243

description:
SH59Q39_Cell3
miRNA


title: LK0241

description:
SH59Q39_Cell1
miRNA


title: LK0242

description:
SH59Q39_Cell2
miRNA


title: S1594-00225_F1


title: S1594-00249_F1


title: LK0239

description:
SH59Q38_Cell3
miRNA


title: LK0240

description:
SH59Q38_Cell4
miRNA


title: LK0237

description:
SH59Q38_Cell1
miRNA


title: S1594-00247_F1


title: LK0238

description:
SH59Q38_Cell2
miRNA


title: LK0234

description:
SH59Q36_Cell2
miRNA


title: LK0230

description:
SH59Q33_Cell3
miRNA


title: LK0228

description:
SH59Q33_Cell2
miRNA


title: LK0225

description:
SH59Q32_Cell3
miRNA


title: LK0227

description:
SH59Q33_Cell1
miRNA


title: LK0226

description:
SH59Q32_Cell4
miRNA


title: S1594-00211_F1


title: S1594-00267_F1


title: S1594-00220_F1


title: S1594-00222_F1


title: S1594-00212_F1


title: S1594-00207_F1


title: S1594-00173_F1


title: S1594-00205_F1


title: S1594-00167_F1


title: LK0224

description:
SH59Q32_Cell2
miRNA


title: S1594-00170_F1


title: S1594-00166_F1


title: LK0223

description:
SH59Q32_Cell1
miRNA


title: LK0220

description:
SH59Q31_Cell2
miRNA


title: S1594-00219_F1


title: LK0221

description:
SH59Q31_Cell3
miRNA


title: S1594-00172_F1


title: S1594-00168_F1


title: LK0219

description:
SH59Q31_Cell1
miRNA


title: S1594-00165_F1


title: S1594-00163_F1


title: S1594-00164_F1


title: S1594-00169_F1


title: S1594-00162_F1


title: LK0215

description:
SH59Q30_Cell1
miRNA


title: LK0214

description:
SH59Q28_Cell4
miRNA


title: S1594-00159_F1


title: LK0212

description:
SH59Q28_Cell2
miRNA


title: LK0213

description:
SH59Q28_Cell3
miRNA


title: LK0211

description:
SH59Q28_Cell1
miRNA


title: S1594-00161_F1


title: S1594-00158_F1


title: LK0210

description:
SH59Q27_Cell4
miRNA


title: LK0209

description:
SH59Q27_Cell3
miRNA


title: LK0217

description:
SH59Q30_Cell3
miRNA


title: LK0218

description:
SH59Q30_Cell4
miRNA


title: LK0207

description:
SH59Q27_Cell1
miRNA


title: LK0206

description:
SH59Q24_Cell4
miRNA


title: S1594-00150_F1


title: S1594-00156_F1


title: S1594-00153_F1


title: S1594-00154_F1


title: S1594-00151_F1


title: LK0198

description:
SH59Q22_Cell4
miRNA


title: LK0200

description:
SH59Q23_Cell2
miRNA


title: LK0205

description:
SH59Q24_Cell3
miRNA


title: LK0201

description:
SH59Q23_Cell3
miRNA


title: S1594-00155_F1


title: LK0208

description:
SH59Q27_Cell2
miRNA


title: S1594-00160_F1


title: S1594-00149_F1


title: LK0196

description:
SH59Q22_Cell2
miRNA


title: LK0194

description:
SH57Y24_Cell4
miRNA


title: S1594-00148_F1


title: S1594-00147_F1


title: S1594-00152_F1


title: S1594-00146_F1


title: S1594-00145_F1


title: S1594-00144_F1


title: LK0193

description:
SH57Y43_Cell2
miRNA


title: S1594-00143_h


title: S1594-00142_F1


title: LK0191

description:
SH57Y24_Cell1
miRNA


title: LK0190

description:
SH57Y23_Cell4
miRNA


title: S1594-00140_F1


title: S1594-00141_F1


title: LK0189

description:
SH57Y23_Cell3
miRNA


title: LK0183

description:
SH57Y22_Cell1
miRNA


title: LK0184

description:
SH57Y22_Cell2
miRNA


title: LK0179

description:
SH57Y21_Cell1
miRNA


title: LK0192

description:
SH57Y24_Cell2
miRNA


title: LK0186

description:
SH57Y43_Cell1
miRNA


title: LK0180

description:
SH57Y21_Cell2
miRNA


title: LK0178

description:
SH57Y20_Cell4
miRNA


title: LK0181

description:
SH57Y41_Cell3
miRNA


title: LK0176

description:
SH57Y20_Cell2
miRNA


title: LK0177

description:
SH57Y41_Cell2
miRNA


title: LK0175

description:
SH57Y20_Cell1
miRNA


title: S1594-00137_F1


title: S1594-00135_F1


title: S1594-00131_F1


title: S1594-00128_F1


title: LK0188

description:
SH57Y23_Cell2
miRNA


title: S1594-00138_F1


title: LK0174

description:
SH57Y19_Cell4
miRNA


title: S1594-00136_F1


title: S1594-00130_F1


title: S1594-00115_F1


title: S1594-00120_F1


title: S1594-00133_F1


title: S1594-00129_F1


title: LK0173

description:
SH57Y19_Cell3
miRNA


title: S1594-00111_F1


title: S1594-00108_F1


title: S1594-00134_F1


title: S1594-00132_F1


title: LK0171

description:
SH57Y19_Cell1
miRNA


title: LK0170

description:
SH57Y41_Cell1
miRNA


title: LK0167

description:
SH57Y18_Cell1
miRNA


title: LK0165

description:
SH57Y17_Cell3
miRNA


title: LK0168

description:
SH57Y18_Cell2
miRNA


title: LK0161

description:
SH57Y16_Cell3
miRNA


title: LK0160

description:
SH57Y16_Cell2
miRNA


title: LK0172

description:
SH57Y19_Cell2
miRNA


title: LK0163

description:
SH57Y17_Cell1
miRNA


title: LK0159

description:
SH57Y16_Cell1
miRNA


title: S1594-00106_F1


title: LK0158

description:
SH57Y15_Cell4
miRNA


title: S1594-00096_F1


title: S1594-00093_F1


title: LK0156

description:
SH57Y15_Cell2
miRNA


title: S1594-00098_F1


title: LK0155

description:
SH57Y15_Cell1
miRNA


title: LK0154

description:
SH57Y14_Cell4
miRNA


title: S1594-00086_F1


title: LK0151

description:
SH57Y14_Cell1
miRNA


title: LK0153

description:
SH57Y14_Cell3
miRNA


title: S1594-00095_F1


title: S1594-00092_F2


title: S1594-00103_F1


title: S1594-00073_F1


title: S1594-00077_F1


title: S1594-00088_F1


title: LK0150

description:
SH57Y13_Cell4
miRNA


title: S1594-00085_F1


title: S1594-00066_F1


title: S1594-00070_F1


title: S1594-00082_F1


title: LK0148

description:
SH57Y13_Cell2
miRNA


title: S1594-00080_F1


title: S1594-00065_F2


title: LK0147

description:
SH57Y13_Cell1
miRNA


title: LK0146

description:
SH57Y12_Cell4
miRNA


title: S1594-00058_F1


title: LK0145

description:
SH57Y12_Cell3
miRNA


title: LK0143

description:
SH57Y12_Cell1
miRNA


title: LK0144

description:
SH57Y12_Cell2
miRNA


title: LK0141

description:
SH57Y09_Cell3
miRNA


title: LK0139

description:
SH57Y09_Cell1
miRNA


title: S1594-00057_F1


title: S1594-00062_F2


title: S1594-00054_F1


title: S1594-00048_F1


title: S1594-00043_F1


title: S1594-00050_F1


title: S1594-00061_F1


title: LK0134

description:
SH57Y03_Cell4
miRNA


title: LK0138

description:
SH57Y07_Cell4
miRNA


title: S1594-00040_F1


title: LK0132

description:
SH57Y03_Cell2
miRNA


title: LK0131

description:
SH57Y01_Cell2
miRNA


title: LK0135

description:
SH57Y07_Cell1
miRNA


title: LK0149

description:
SH57Y13_Cell3
miRNA


title: LK0130

description:
SH57Y01_Cell1
miRNA


title: LK0128

description:
SH57X66_Cell3
miRNA


title: LK0127

description:
SH57X66_Cell2
miRNA


title: S1594-00038_F1


title: S1594-00034_F1


title: S1594-00035_F1


title: S1594-00032_F1


title: LK0129

description:
SH57X66_Cell4
miRNA


title: S1594-00031_F1


title: S1594-00037_F1


title: S1594-00022_F1


title: LK0122

description:
SH57X65_Cell1
miRNA


title: S1594-00028_F1


title: S1594-00021_F1


title: SG11474142_252665248198_S001_GE1_1105_Oct12_1_3

city: Borstel/Suelfeld

first: Maja

last: Reimann

state: Schleswig Holstein

address: Parkallee 35

department: Clinical infectious disease

institute: Research Center Borstel

description: Romanian MDR Cohort

hyb_protocol: Agilent Low Input Quick Amp Labelling Kit One Color according to manufacturers instructions

data_processing: Data has been log-transformed and normalized (percentile shift) within the Agilent GeneSpring V13 software

source_name: Pat_RVC_52Day 28

extract_protocol: Paxgene blood RNA isolation kit according to manufacturers instructions

treatment_protocol: Whole-blood samples were stored using PAX gene tubes

value: MDR

value: whole-blood


title: LK0124

description:
SH57X65_Cell3
miRNA


title: SG11474142_252665248199_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

scan_protocol: Agilent Low Input Quick Amp Labelling Kit One Color according to manufacturers instructions

source_name: Pat_RVC_52Day 450


title: LK0120

description:
SH57X64_Cell3
miRNA


title: SG11474142_252665248199_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_52Day 600

label_protocol: Agilent Low Input Quick Amp Labelling Kit One Color according to manufacturers instructions


title: SG11474142_252665248311_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_51Day 600


title: SG11474142_252665248311_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_51Day 450


title: SG11474142_252665248198_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_52Day 180


title: SG11474142_252665248310_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_51Day 180


title: LK0117

description:
SH57X63_Cell4
miRNA


title: LK0119

description:
SH57X64_Cell2
miRNA


title: LK0115

description:
SH57X63_Cell2
miRNA


title: LK0126

description:
SH57X66_Cell1
miRNA


title: SG11474142_252665241149_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_51Day 28


title: LK0114

description:
SH57X63_Cell1
miRNA


title: SG11474142_252665241149_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_51Day 14


title: SG11474142_252665248199_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_52Day 300


title: SG11474142_252665241149_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_51Day 0


title: SG11474142_252665248198_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_50Day 600


title: SG11474142_252665248198_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_52Day 0


title: LK0113

description:
SH57X60_Cell4
miRNA


title: LK0111

description:
SH57X60_Cell2
miRNA


title: LK0112

description:
SH57X60_Cell3
miRNA


title: SG11474142_252665241158_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_50Day NA


title: SG11474142_252665240353_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_50Day 180


title: LK0118

description:
SH57X64_Cell1
miRNA

source_name: Serum


title: SG11474142_252665248193_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_50Day 450


title: SG11474142_252665241167_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_50Day 28


title: LK0121

description:
SH57X64_Cell4
miRNA


title: LK0108

description:
SH57X59_Cell3
miRNA


title: LK0106

description:
SH57X59_Cell1
miRNA


title: LK0107

description:
SH57X59_Cell2
miRNA


title: LK0110

description:
SH57X60_Cell1
miRNA


title: SG11474142_252665241158_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_50Day 14


title: SG11474142_252665241158_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_50Day 0


title: SG11474142_252665248213_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_49Day 300


title: SG11474142_252665248205_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_48Day 450


title: LK0103

description:
SH57X58_Cell2
miRNA


title: SG11474142_252665248205_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_48Day 300


title: SG11474142_252665248208_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_48Day 180


title: LK0102

description:
SH57X58_Cell1
miRNA


title: SG11474142_252665240653_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_48Day 28


title: LK0101

description:
SH57X57_Cell4
miRNA


title: LK0100

description:
SH57X57_Cell3
miRNA


title: LK0098

description:
SH57X57_Cell1
miRNA


title: LK0097

description:
SH57X55_Cell4
miRNA


title: SG11474142_252665240653_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_48Day 14


title: SG11474142_252665248309_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_47Day 600


title: SG11474142_252665240653_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_48Day 0


title: LK0096

description:
SH57X55_Cell3
miRNA


title: SG11474142_252665248309_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_47Day 300


title: SG11474142_252665241165_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_47Day 28


title: SG11474142_252665248216_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_47Day 180


title: SG11474142_252665241152_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_47Day 14


title: LK0094

description:
SH57X55_Cell1
miRNA

source_name: Serum


title: LK0095

description:
SH57X55_Cell2
miRNA


title: LK0105

description:
SH57X58_Cell4
miRNA


title: LK0090

description:
SH57X54_Cell1
miRNA


title: LK0093

description:
SH57X54_Cell4
miRNA


title: LK0092

description:
SH57X54_Cell3
miRNA


title: LK0091

description:
SH57X54_Cell2
miRNA


title: SG11474142_252665248308_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_46Day 450


title: SG11474142_252665241151_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_46Day 300


title: LK0089

description:
SH57X51_Cell4
miRNA


title: LK0085

description:
SH57X50_Cell4
miRNA


title: LK0088

description:
SH57X51_Cell3
miRNA


title: LK0083

description:
SH57X50_Cell2
miRNA


title: SG11474142_252665248310_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_46Day 600


title: SG11474142_252665248216_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_47Day 450


title: SG11474142_252665241168_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_45Day 28


title: LK0086

description:
SH57X51_Cell1
miRNA


title: SG11474142_252665241151_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_46Day 0


title: SG11474142_252665241151_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_46Day 180


title: LK0081

description:
SH57X47_Cell4
miRNA


title: SG11474142_252665241166_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_46Day 14


title: LK0078

description:
SH57X47_Cell1
miRNA


title: LK0077

description:
SH57X44_Cell4
miRNA


title: SG11474142_252665248209_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_44Day 600


title: SG11474142_252665241151_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_45Day 14


title: LK0076

description:
SH57X44_Cell3
miRNA


title: SG11474142_252665241152_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_47Day 0


title: SG11474142_252665248207_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_44Day 450


title: LK0074

description:
SH57X44_Cell1
miRNA


title: SG11474142_252665248207_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_44Day 180


title: SG11474142_252665248207_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_44Day 300


title: SG11474142_252665248207_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_44Day 28


title: LK0075

description:
SH57X44_Cell2
miRNA


title: LK0084

description:
SH57X50_Cell3
miRNA


title: SG11474142_252665248208_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_44Day 14


title: LK0068

description:
SH57X39_Cell3
miRNA

source_name: Serum


title: SG11474142_252665248206_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_44Day 0


title: LK0073

description:
SH57X43_Cell4
miRNA


title: LK0070

description:
SH57X43_Cell1
miRNA


title: LK0067

description:
SH57X39_Cell2
miRNA


title: SG11474142_252665248214_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_43Day 600


title: SG11474142_252665248214_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_43Day 450


title: LK0066

description:
SH57X39_Cell1
miRNA


title: SG11474142_252665248213_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_43Day 180


title: SG11474142_252665248214_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_43Day 300


title: SG11474142_252665241150_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_43Day 14


title: LK0065

description:
SH57X36_Cell4
miRNA


title: SG11474142_252665241166_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_43Day 0


title: LK0063

description:
SH57X36_Cell2
miRNA


title: SG11474142_252665241150_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_42Day NA


title: LK0062

description:
SH57X36_Cell1
miRNA


title: LK0061

description:
SH57X35_Cell4
miRNA


title: LK0059

description:
SH57X35_Cell2
miRNA


title: SG11474142_252665241149_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_42Day 0


title: SG11474142_252665241150_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_42Day 28


title: LK0060

description:
SH57X35_Cell3
miRNA


title: LK0058

description:
SH57X35_Cell1
miRNA


title: SG11474142_252665248210_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_41Day 450


title: LK0057

description:
SH57X34_Cell4
miRNA


title: LK0056

description:
SH57X34_Cell3
miRNA


title: SG11474142_252665248210_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_41Day 300


title: SG11474142_252665240351_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_41Day 0


title: SG11474142_252665241150_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_43Day 28


title: LK0064

description:
SH57X36_Cell3
miRNA


title: SG11474142_252665240656_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_40Day 14


title: SG11474142_252665240351_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_41Day 14


title: LK0052

description:
SH57X33_Cell3
miRNA

source_name: Serum


title: SG11474142_252665240656_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_40Day 0


title: LK0051

description:
SH57X33_Cell2
miRNA


title: LK0054

description:
SH57X34_Cell1
miRNA


title: LK0050

description:
SH57X33_Cell1
miRNA


title: LK0053

description:
SH57X33_Cell4
miRNA


title: SG11474142_252665248312_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_39Day 600


title: LK0049

description:
SH57X30_Cell4
miRNA


title: SG11474142_252665248312_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_39Day 450


title: SG11474142_252665241166_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_39Day 300


title: LK0046

description:
SH57X30_Cell1
miRNA


title: SG11474142_252665240656_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_39Day 180


title: LK0048

description:
SH57X30_Cell3
miRNA


title: SG11474142_252665248210_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_41Day 600


title: LK0055

description:
SH57X34_Cell2
miRNA


title: SG11474142_252665240656_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_39Day NA


title: SG11474142_252665241152_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_39Day 28


title: SG11474142_252665241165_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_39Day 14


title: LK0045

description:
SH57X28_Cell4
miRNA


title: SG11474142_252665241165_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_39Day 0


title: LK0041

description:
SH57X27_Cell4
miRNA


title: LK0040

description:
SH57X27_Cell3
miRNA


title: SG11474142_252665248201_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_38Day NA


title: LK0037

description:
SH57X26_Cell4
miRNA


title: LK0039

description:
SH57X27_Cell2
miRNA


title: LK0036

description:
SH57X26_Cell3
miRNA


title: LK0035

description:
SH57X26_Cell2
miRNA


title: SG11474142_252665240652_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_38Day 28


title: SG11474142_252665248201_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_38Day 180


title: LK0034

description:
SH57X26_Cell1
miRNA


title: SG11474142_252665248201_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_38Day 300


title: LK0033

description:
SH57X25_Cell4
miRNA


title: SG11474142_252665248215_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_37Day 600


title: LK0031

description:
SH57X25_Cell2
miRNA


title: LK0032

description:
SH57X25_Cell3
miRNA


title: SG11474142_252665248215_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_37Day 300


title: SG11474142_252665248201_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_38Day 450


title: SG11474142_252665248214_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_37Day 180


title: SG11474142_252665240652_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_38Day 14


title: LK0038

description:
SH57X27_Cell1
miRNA

source_name: Serum


title: SG11474142_252665241164_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_37Day 0


title: LK0029

description:
SH57X24_Cell4
miRNA


title: LK0030

description:
SH57X25_Cell1
miRNA


title: SG11474142_252665240654_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_37Day 14


title: LK0027

description:
SH57X24_Cell2
miRNA


title: LK0028

description:
SH57X24_Cell3
miRNA


title: SG11474142_252665240762_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_36Day 28


title: LK0023

description:
SH57X23_Cell2
miRNA


title: SG11474142_252665240383_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_36Day 14


title: LK0026

description:
SH57X24_Cell1
miRNA


title: LK0025

description:
SH57X23_Cell4
miRNA


title: SG11474142_252665241165_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_35Day 14


title: LK0024

description:
SH57X23_Cell3
miRNA


title: SG11474142_252665241168_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_36Day 0


title: SG11474142_252665248308_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_34Day 600


title: LK0022

description:
SH57X23_Cell1
miRNA


title: LK0021

description:
SH57X22_Cell4
miRNA


title: SG11474142_252665241152_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_35Day 0


title: SG11474142_252665248215_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_37Day 450


title: SG11474142_252665248310_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_34Day 450


title: LK0019

description:
SH57X22_Cell2
miRNA


title: LK0020

description:
SH57X22_Cell3
miRNA


title: LK0018

description:
SH57X22_Cell1
miRNA


title: SG11474142_252665240654_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_37Day 28


title: SG11474142_252665248308_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_34Day 300


title: LK0017

description:
SH57X21_Cell4
miRNA


title: SG11474142_252665248308_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_34Day 180


title: SG11474142_252665241155_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_34Day 14


title: SG11474142_252665241156_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_34Day NA


title: SG11474142_252665241167_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_34Day 28


title: SG11474142_252665241155_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_34Day 0


title: LK0011

description:
SH57X20_Cell2
miRNA

source_name: Serum


title: SG11474142_252665248200_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_33Day 450


title: SG11474142_252665240383_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_33Day 180


title: SG11474142_252665248200_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_33Day 600


title: LK0015

description:
SH57X21_Cell2
miRNA


title: LK0012

description:
SH57X20_Cell3
miRNA


title: LK0013

description:
SH57X20_Cell4
miRNA


title: SG11474142_252665240383_S001_GE1_1105_Oct12_1_1

description: Romanian MDR Cohort

source_name: Pat_RVC_33Day 14


title: LK0014

description:
SH57X21_Cell1
miRNA


title: LK0010

description:
SH57X20_Cell1
miRNA


title: SG11474142_252665240382_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_33Day 0


title: LK0005

description:
SH57X18_Cell4
miRNA


title: LK0016

description:
SH57X21_Cell3
miRNA


title: LK0007

description:
SH57X19_Cell2
miRNA


title: LK0006

description:
SH57X19_Cell1
miRNA


title: LK0003

description:
SH57X18_Cell2
miRNA


title: LK0008

description:
SH57X19_Cell3
miRNA


title: SG11474142_252665240351_S001_GE1_1105_Oct12_1_2

description: Romanian MDR Cohort

source_name: Pat_RVC_32Day 28


title: LK0004

description:
SH57X18_Cell3
miRNA


title: SG11474142_252665248212_S001_GE1_1105_Oct12_1_3

description: Romanian MDR Cohort

source_name: Pat_RVC_32Day 450


title: SG11474142_252665248212_S001_GE1_1105_Oct12_1_4

description: Romanian MDR Cohort

source_name: Pat_RVC_32Day 600


title: LK0002

description:
SH57X18_Cell1
miRNA


title: LK0009

description:
SH57X19_Cell4
miRNA


title: LK0001

description:
SH57X17_Cell4
miRNA