title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRB019575_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019312_G1]

status: Public on Mar 19 2021

type: genomic

city: Memphis

first: Zhaoming

last: Wang

state: TN

address: 262 Danny Thomas Place

department: Epidemiology & Cancer Control

country: USA

institute: St. Jude Children's Research Hospital

description: blood from survivor of childhood cancer

hyb_protocol: Bisulphite converted DNA was amplified, fragmented and hybridized to Illumina Infinium MethylationEPIC BeadChips using standard Illumina protocal

scan_protocol: Arrays were stained and scanned using the Illumina HiScan system with standard recommended Illumina scanner setting

data_processing:
GenomeStudio V2011.1
Unmethylated and methylated signal intensities provided in the SJLIFE_IlluminaEPIC_2052samples_GEO_03162021_signal.txt
Average Beta provided in the SJLIFE_IlluminaEPIC_2052samples_GEO_03162021_processed.txt

label: Cy5 and Cy3

molecule: genomic DNA

organism: Homo sapiens

source_name: peripheral blood mononuclear cells

label_protocol: Standard Illumina Protocal

extract_protocol: DNA extracted from periperihal blood mononuclear cells using the QIAamp DNA Blood Mini Kit (Qiagen cat#51106)

tag: gender

value: Female

tag: age

tag: anthracyclines

tag: alkylating agent,classic

tag: corticosteroids

tag: epipodophyllotoxins

tag: vinca alkaloids

tag: asparaginase enzymes

tag: antimetabolites

tag: brainrt

tag: chestrt

tag: abdominalrt

tag: pelvicrt


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019228_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019411_G1]

description: blood from survivor of childhood cancer

value: Male


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019434_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019019_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019646_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019438_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018998_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB019599_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019081_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS019608_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019010_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019663_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL005044_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019050_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019403_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLM019374_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019458_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019000_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS019203_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCA019119_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019290_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019490_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019040_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019474_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018930_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019410_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018968_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019154_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019477_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019224_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018453_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019294_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJST019552_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018809_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019320_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018724_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018747_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018512_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018603_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLM019365_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018662_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018848_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018758_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018656_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018456_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019182_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018912_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018818_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018791_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018903_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHIST019243_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018567_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018541_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018783_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018822_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018660_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018610_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018705_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018412_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019392_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018721_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT018632_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018723_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018564_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018843_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018455_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018669_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018534_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018513_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018430_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018792_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018449_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018663_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018816_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018691_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJAML019113_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018445_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018713_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018425_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018693_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018979_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018710_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018742_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018599_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018718_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018799_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018647_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018436_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018856_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018424_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018756_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018423_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018905_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018401_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018452_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018658_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS003704_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018462_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018801_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018817_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018861_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018701_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018442_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018466_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018844_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018854_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018764_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018839_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018696_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018888_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018447_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018514_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS001201_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018621_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019227_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018496_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018683_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018524_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018406_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT018634_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018441_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS001206_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018716_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018717_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018443_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018711_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018464_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018511_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018672_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018876_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018810_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018582_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018794_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018440_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018700_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018491_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018736_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018399_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018542_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018686_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018781_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018508_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018422_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018416_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018522_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018681_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018782_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018413_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018676_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018813_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL005325_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018859_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018654_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018750_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLM018725_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018704_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018528_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018863_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018768_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018419_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018872_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018451_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018539_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018450_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018748_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS001214_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018898_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018772_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018609_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018532_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018786_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018851_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018808_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018434_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018569_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRB018827_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018526_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018468_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018592_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018719_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018457_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018812_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJAML018551_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018880_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018587_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018463_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018586_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018482_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018478_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018770_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018730_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS009090_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018465_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018778_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJAML018552_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018591_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHIST018645_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018601_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018762_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018788_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS001216_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018883_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018572_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018398_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018909_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL006048_G2]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018695_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018490_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018731_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018615_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018738_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018667_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018690_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018913_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018712_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018804_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018571_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018476_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018595_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018682_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018577_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJAML018550_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018895_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018613_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018653_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018617_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCA018563_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018708_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018400_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018897_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018703_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018489_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018581_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018714_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018664_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018608_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018720_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018576_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018410_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018448_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018460_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018417_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018675_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018414_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018537_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018759_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018518_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018432_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018600_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018659_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018606_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018661_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018467_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018760_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018709_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018593_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018795_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018570_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018722_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018428_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHIST018642_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018623_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018421_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT018633_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018806_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHIST018646_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018767_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018427_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018472_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018743_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018520_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018807_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018503_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT018639_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018789_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018842_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018408_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018692_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018749_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018755_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018502_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018529_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018625_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS001522_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018685_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS018611_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018732_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT018629_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018836_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJAML018557_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJAML018562_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018494_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018976_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018492_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018702_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018746_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018506_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018744_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018404_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018411_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT018638_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018916_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018821_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018773_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018407_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018805_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJAML018560_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018803_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018745_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018741_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB019595_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018493_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018677_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018486_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018845_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018698_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS019545_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018477_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018501_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018763_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018837_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018540_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018426_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL018706_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL018790_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS018578_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT018635_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM018881_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018549_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018474_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018446_G2]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS018811_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018865_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019384_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB018850_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019688_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019630_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJPML030005_G2]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJST019553_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019460_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHIST019240_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHIST019242_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019705_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019469_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS019600_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019702_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCML018604_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019672_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS019538_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019632_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS019625_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019274_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019673_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS019624_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019404_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLM019370_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS019522_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019685_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019457_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019459_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL018739_G2]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019425_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLM019367_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019399_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019451_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL018984_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019427_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019070_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019226_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLM019369_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCA019120_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS019539_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019703_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019500_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019148_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019467_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019453_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJST019550_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS019541_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019235_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019234_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019674_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019016_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019332_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019396_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS019601_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019471_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019382_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019229_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019087_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019406_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHM019549_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS019204_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019423_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB019577_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNPC019504_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS019540_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019021_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019659_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019671_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019361_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJAML019111_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019401_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019163_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLM019366_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHIST019241_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019695_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019014_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019390_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019223_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019018_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019316_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019808_G1]

description: blood from survivor of childhood cancer


title: iSTAT3β_input-DNA

type: SRA

city: Melbourne

first: Marie

last: Bogoyevitch

state: VIC

address: Medical Building, Grattan Street

department: Department of Biochemistry and Molecular Biology

country: Australia

institute: The University of Melbourne

description: Input sample genomic DNA sequenced. Raw file "iSTAT3b_input_merged.bam" is the merged aligned reads in bam format.

library_source: genomic

data_processing:
Sequenced reads were adapter trimmed using trim_galore (v0.4.2) (Babraham Institute, UK), filtered for sequences with a quality score of at least 28 (Phred+33).
Reads were mapped to the mm9 genome assembly (NCBI m37, GCA_000001635.18) using STAR (v2.5.0a), with parameters adapted for mapping ChIP-seq reads (“--alignIntronMax 1 --alignEndsType EndToEnd”).
Duplicated mapped reads (tags) were removed using SAMBAMBA (v0.6.6) (http://lomereiter.github.io/sambamba/index.html) and then filtered for high complexity or empirical artefact blacklisted genomic regions (MOUSE mm9, http://mitra.stanford.edu/kundaje/akundaje/release/blacklists/mm9-mouse/mm9-blacklist.bed.gz) using Bedtools intersect (v2.26.0) (University of Utah, USA).
To call ChIP-enriched genomic regions (peaks), replicate BAM files were merged before peak-calling with MACS2 (v2.1.1.20160309) and HOMER (v4.9) software with the corresponding input sample as the background control. To reduce peak caller bias, only peaks identified by both MACS2 and HOMER were considered. Overlapping peaks were merged using Bedtools merge.
Genome_build: mm9
Supplementary_files_format_and_content: Enriched genomic regions in bed file format

organism: Mus musculus

source_name: Murine Embryonic Fibroblasts

growth_protocol: Inducible STAT3 spliceform (iSTAT3α and iSTAT3β) MEFs were maintained in DMEM (Dulbecco’s modified Eagle’s medium, Gibco, USA) supplemented with 10% (v/v) fetal calf serum (FCS) (DKSH, Switzerland) and 100 U/mL penicillin/streptomycin (P/S) (Gibco, USA) within a humidified incubator (5% CO2, 37°C). Cells were additionally supplemented with puromycin (10 μg/mL; Calbiochem, USA) to select cells with continued expression of the STAT3 spliceform gene constructs.

extract_protocol:
Cells were rinsed with PBS and cross-linked with 1% (w/v) formaldehyde at room temperature (10 min). The cross-linking reaction was quenched by adding 0.1 volume of 1.25 M glycine and incubated at room temperature (5 min). The cells were then rinsed with cold PBS and lysed in 5 mL nucleus isolation buffer (20 mM Tris-HCl pH 8.0, 85 mM KCl, 0.5% (v/v) NP-40) supplemented with Complete™ protease inhibitor mix (Roche Diagnostic, USA). The pellet, containing the crude nuclear preparation, was collected after centrifugation (1,200 × g, 5 min, 4°C) then lysed in 1 mL cold nucleus lysis buffer (150 mM NaCl, 50 mM Tris-HCl pH 7.3, 1 mM EDTA pH 8.0, 0.5% (w/v) sodium deoxycholate, 1% (w/v) SDS, 1% (v/v) NP-40) supplemented with Complete™ protease inhibitor mix.  The resulting nuclear extract was then sonicated (4°C, high setting, 20 cycles: 30 seconds on, 30 seconds off) in a Biorupter® Pico (Diagenode, USA) to obtain 200-500 bp DNA fragments.
Sequencing libraries were constructed using the NEBNext Ultra II DNA Library Prep kit (New England Biolabs, USA) according to the manufacturer’s protocol.
Libraries were sequenced using the Illumina NextSeq 550 System (Illumina, USA). Duplicate samples were prepared and analysed.

treatment_protocol: Cells were seeded on tissue culture dishes and maintained in growth medium within a humidified incubator (5% CO2, 37°C) for at least 16 h prior to treatment. For the expression of specific STAT3 spliceforms in iSTAT3α and iSTAT3β MEFs, 1 nM 4-hydroxytamoxifen (4-HT) (Sigma-Aldrich, USA) was included for at least 48 h. Medium was subsequently replaced with serum-free medium (DMEM supplemented with only 100 U/mL P/S) (Gibco, USA) 16 h prior to treatment with human recombinant oncostatin M (OSM) (10 ng/mL) (Calbiochem, USA) for 0, 30 or 180 min.

tag: genotype

value: STAT3-/- re-expressing STAT3beta

tag: chip antibody


title: iSTAT3β_30-min-OSM_ChIPSeq

description: Sample genomic DNA subjected to ChIP protocol and sequenced. Processed data file "iSTAT3b_30_peaks.bed" is a list of enriched peaks in bed format. Raw file "iSTAT3b_30_merged.bam" is the merged aligned reads in bam format.

value: Anti-pSTAT3 Tyr-705 rabbit monoclonal (Cell Signalling Technology #9131, USA)


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019728_G1]

description: blood from survivor of childhood cancer


title: iSTAT3β_180-min-OSM_ChIPSeq

description: Sample genomic DNA subjected to ChIP protocol and sequenced. Processed data file "iSTAT3b_180_peaks.bed" is a list of enriched peaks in bed format. Raw file "iSTAT3b_180_merged.bam" is the merged aligned reads in bam format.


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019782_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB019582_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019138_G1]

description: blood from survivor of childhood cancer


title: iSTAT3α_input-DNA

description: Input sample genomic DNA sequenced. Raw file "iSTAT3a_input_merged.bam" is the merged aligned reads in bam format.

value: STAT3-/- re-expressing STAT3alpha


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019060_G1]

description: blood from survivor of childhood cancer


title: iSTAT3β_0-min-OSM_ChIPSeq

description: Sample genomic DNA subjected to ChIP protocol and sequenced. Processed data file "iSTAT3b_0_peaks.bed" is a list of enriched peaks in bed format. Raw file "iSTAT3b_0_merged.bam" is the merged aligned reads in bam format.


title: iSTAT3α_180-min-OSM_ChIPSeq

description: Sample genomic DNA subjected to ChIP protocol and sequenced. Processed data file "iSTAT3a_180_peaks.bed" is a list of enriched peaks in bed format. Raw file "iSTAT3a_180_merged.bam" is the merged aligned reads in bam format.


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019845_G1]

description: blood from survivor of childhood cancer


title: iSTAT3α_30-min-OSM_ChIPSeq

description: Sample genomic DNA subjected to ChIP protocol and sequenced. Processed data file "iSTAT3a_30_peaks.bed" is a list of enriched peaks in bed format. Raw file "iSTAT3a_30_merged.bam" is the merged aligned reads in bam format.


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019783_G1]

description: blood from survivor of childhood cancer


title: iSTAT3α_0-min-OSM_ChIPSeq

description: Sample genomic DNA subjected to ChIP protocol and sequenced. Processed data file "iSTAT3a_0_peaks.bed" is a list of enriched peaks in bed format. Raw file "iSTAT3a_0_merged.bam" is the merged aligned reads in bam format.


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019841_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019844_G1]

description: blood from survivor of childhood cancer


title: POINTnano_HeLa_PlaB_Rep2

city: Lisboa

first: Rui

last: Sousa-Luís

address: Av. Professor Egas Moniz

country: Portugal

institute: Instituto de Medicina Molecular João Lobo Antunes

library_source: transcriptomic

data_processing:
Library strategy: POINT-5
POINT-seq and POINT-5 read adaptors were trimmed using TrimGalore v0.4.4 in paired-end mode, removing reads with less than 10 bases and/or low-quality ends (20 Phred score cut-off). The resultant reads were aligned against the reference human genome (GRCh38) using STAR v2.7.0 software (Dobin et al., 2013), requiring uniquely mapped reads (--outFilterMultimapNmax 1) and minimum alignment score (--outFilterScoreMin) of 10. Additionally, for POINT-5 the 5’end of the original RNA and their directionality was extracted. To do this, the script created for mNET-seq (Nojima et al., 2015) to obtain single nucleotide resolution profiles was adapted to define the 5’end of the first read in each pair as well as its directionality.
BAM files were split by strand with SAMtools v1.9 according their bitwise flags. In POINT-seq data, forward oriented strand had 83 and 163 flags associated while reverse oriented strand had 99 and 147 flags associated. Oppositely, 99 and 147 flags for POINT-5 correspond to the forward strand, while 83 and 163 to the reverse strand. For POINT-nano, 0 and 16 flags were used to call forward and reverse strand reads, respectively. Data was visualized applying genomeCoverageBed function of BedTools to each strand independently. Trackhubs in the UCSC browser were created by employing the UCSC bedGraphToBigWig v4 tool (Kent et al., 2002).
Genome_build: hg38
Supplementary_files_format_and_content: bigWig format - read counts per bp for each strand
Supplementary_files_format_and_content: bigBed format - long reads split by strand

molecule: total RNA

source_name: HeLa

extract_protocol:
POINT method was performed as previously described mNET-seq protocol (Nojima et al., 2016) with some alterations.  In brief, crude nuclear fraction was prepared from HeLa or HCT116 cells (1x107 for POINT-seq and POINT-5, 4x107 for POINT-nano) as in mNET protocol. Chromatin pellet was resuspended in NUN1 (20 mM Tris-HCl (pH 7.9), 75 mM NaCl, 0.5 mM EDTA and 50% Glycerol) and treated with modified NUN2 buffer (20 mM HEPES-KOH (pH 7.6), 300 mM NaCl, 0.2 mM EDTA, 7.5 mM MgCl2, 1% NP-40, 1 M Urea, 3% Empigen, 1x proteasome inhibitor Complete (-EDTA) and 1x PhosSTOP). Note Empigen-treated nuclear solution was gently mixed by inverting tube a few times to avoid chromatin aggregation and incubated on ice for 10 min. The chromatin pellet was centrifuged at 400g for 30 sec. The pellet was washed with PBS twice and then digested in DNase solution (10 mM Tris-HCl (pH 7.5), 400 mM NaCl, 100 mM MnCl2, 2 U/mL RiboLock and 0.2 U/mL Turbo DNase) for 15 min. After DNA digestion, soluble digested chromatin was collected by 13,000 rpm centrifugation for 10 min. The supernatant was ten times-diluted in ice-cold NET-2E buffer (50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 0.05 % NP-40 and 3% Empigen BB) and Pol II antibody-conjugated beads were added. 10 or 40 mg of Pol II antibody (200 or 800 mL of Dynabeads anti-mouse IgG) was used for POINT-seq and POINT-5 or POINT-nano methods. Immunoprecipitation was performed at 4oC for 1 hr. The beads were washed with 1 ml of ice-cold NET-2E buffer six times. The isolated nascent RNA was purified using Trizol reagent technology twice with once DNase treatment. Note that polyA tails were added to the isolated RNA by in vitro polyadenylation with E.coli PAP for POINT-nano. Then the pA+RNA was size-selected using SPRISelect reagent (x0.6 volume).
Library prep for illumina sequencing (NovaSeq6000) employed NEBNext Ultra II Directional RNA library prep kit and SMARTer Stranded RNA-seq kit for POINT-seq and POINT-5 analyses, respectively.  For ONT sequencing, Direct cDNA library prep kit was used for POINT-nano analysis. Illumina and ONT sequencing (PromethION) were conducted by Novogene UK and the high throughput genomics team of the Wellcome Trust Centre for Human Genetics (WTCHG), Oxford.

tag: cell line

value: HeLa

tag: treatment

value: Untreated


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019804_G1]

description: blood from survivor of childhood cancer

tag: gender


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019462_G1]

description: blood from survivor of childhood cancer

tag: age


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019152_G1]

description: blood from survivor of childhood cancer

tag: anthracyclines


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB019831_G1]

description: blood from survivor of childhood cancer

tag: alkylating agent,classic


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJGCT019772_G1]

description: blood from survivor of childhood cancer

tag: corticosteroids


title: POINTnano_HeLa_PlaB_Rep1


title: POINTnano_HeLa_DMSO_Rep2


title: POINTnano_HeLa_DMSO_Rep1


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019726_G1]

description: blood from survivor of childhood cancer

tag: epipodophyllotoxins


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019849_G1]

description: blood from survivor of childhood cancer

tag: vinca alkaloids


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019781_G1]

description: blood from survivor of childhood cancer

tag: asparaginase enzymes


title: POINTnano_HeLa_Untr_Rep2


title: POINTnano_HeLa_Untr_Rep1


title: WT 1

city: Guangzhou

first: Ye

last: He

address: No.1023, South Shatai Road, Baiyun District

country: China

institute: Southern Medical University Nanfang Hospital

description: exosomal miRNA

data_processing:
Data were generated after sequencing, image analysis, base calling and quality filtering on Illumina sequencer.
The adaptor sequences were trimmed and the adaptor-trimmed-reads (>= 15nt) were left by cutadapt software (v1.9.3).
MiRDeep2 software (v2.0.0.5) was used to predict novel miRNAs
The trimmed reads were aligned to the merged pre-miRNA databases (known pre-miRNA from miRBase plus the newly predicted pre-miRNAs) using Novoalign software (v3.02.12) with at most one mismatch.
The numbers of mature miRNA mapped tags were defined as the raw expression levels of that miRNA. The read counts were normalized by TPM (tag counts per million aligned miRNAs) approach.
Differentially expressed miRNAs between two samples were filtered through Fold change. Differentially expressed miRNA between two groups were filtered by Fold Change and P-value based on volcano plot.
Genome_build: miRBase (v22)
Supplementary_files_format_and_content: The miRNA_expression.xlsx file includes the miRNA information and tag counts.
Supplementary_files_format_and_content: xlsx

source_name: BV2 cells

growth_protocol: Cells were cultured with Dulbecco's Modified Eagle Media (DMEM), supplemented with 10% fetal bovine serum (FBS), and incubated at 37 °C in a humified incubator containing 5% CO2.

extract_protocol:
We isolated the exosomes using the Umibio® exosome isolation kit (UR52121, Umibio, China). MiRNA was harvested using Trizol reagent for library construction.
Total RNA of each sample was used to prepare the miRNA sequencing library, which included the following steps: 1) 3'-adaptor ligation; 2) 5'-adaptor ligation; 3) cDNA synthesis; 4) PCR amplification; 5) Size selection of ~150 bp PCR amplicons (corresponding to ~22nt miRNAs)

treatment_protocol: The Optn-KD group was treated with siRNA for 24 hours.

tag: cell type

value: cell line

value: untreated


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRB019816_G1]

description: blood from survivor of childhood cancer

tag: antimetabolites

tag: brainrt


title: WT 3

description: exosomal miRNA


title: Optn-KD 3

description: exosomal miRNA

value: Optn-siRNA


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019713_G1]

description: blood from survivor of childhood cancer

tag: chestrt

tag: abdominalrt


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLM019798_G1]

description: blood from survivor of childhood cancer

tag: pelvicrt


title: Optn-KD 2

description: exosomal miRNA


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019037_G1]

description: blood from survivor of childhood cancer


title: Optn-KD 1

description: exosomal miRNA


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB019832_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019724_G1]

description: blood from survivor of childhood cancer


title: NC ctrl deep 3

city: Freising

first: Tobias

last: Fromme

address: Gregor-Mendel-Str. 2

department: Molecular Nutritional Medicine

country: Germany

institute: Technical University of Munich

data_processing:
Sequencing with Illumina HiSeq4000
Sequenced reads with masked adaptor sequence were mapped to the murine genome, NCBI build 38, by the Genomatix Mapper 3.7.6 (Genomatix Mining Station, settings: 'deep', min. quality 92%).
Unique hits were subjected to expression analysis for RNA-seq (Genomatix Genome Analyzer, ElDorado version 12-2013) and provided as reads per kilobase of exon per megabase of library size (RPKM).
Genome_build: murine NCBI genome build 38
Supplementary_files_format_and_content: tab-delimited text file providing RPKM values for each sample.

source_name: primary brite adipocytes

growth_protocol: Primary preadipocytes were prepared from stromal-vascular fraction of murine inguinal white adipose tissue of 129SvEv mice, induced at sub-confluence for 2 days and differentiated for 1 day in the presence of rosiglitazone to induce browning.

extract_protocol:
Differentiating brite adipocytes were washed with PBS and scraped into Trisure (Bioline). Total RNA was prepared from Trisure (Bioline) and column-purified (SV Total RNA Isolation System, Promega).
Libraries were constructed from total RNA (TruSeq Stranded Total RNA Kit (Illumina))

treatment_protocol: Cells were reverse transfected with lncRNA Ctcflos-targeting or non-targeting control LNA Gapmer Antisense oligonucleotides [50nM] and harvested either 24 hours or 72 hours post transfection.

tag: source organ

value: inguinal WAT

tag: genotype


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019776_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019424_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019795_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019802_G1]

description: blood from survivor of childhood cancer


title: NC ctrl deep 2


title: Ctcflos KD deep 3


title: WT 2

description: exosomal miRNA

tag: treatment


title: NC ctrl deep 1


title: POINTnano_HeLa_Untr_Rep3

tag: cell line


title: Ctcflos KD deep 2


title: Sample 4_HFDCD169_DTR3_S20_L003

city: SINGAPORE

first: JIA CHI

last: TAN

address: 8a Biomedical Grove

country: Singapore

institute: SIgN

data_processing:
cellranger-3.1.0 cellranger count was used to generate umi counts for each sample with refdata-cellranger-mm10-3.0.0, then cellranger aggr  was used to aggregate the 4 samples.
Genome_build: refdata-cellranger-mm10-3.0.0
Supplementary_files_format_and_content: filtered_feature_bc_matrix generated by cellranger

growth_protocol: Mice were fed with Normal Diet or High Fat Diet for 16 weeks

extract_protocol: Using the 10X Genomics Chromium Controller, about 8,700-14,000 cells were encapsulated in droplets at a targeted cell recovery of 7000 cells, resulting in estimated multiplet rates of 5.4%. Single cell 3’ Gene Expression libraries were prepared using the 10X Genomics Chromium Single Cell 3′ Library & Gel Bead Kit v3, A Chip Kit and i7 Multiplex Kit according to the manufacturer’s protocol (10X Genomics, Pleasanton, CA, USA).

treatment_protocol: DT treatment for 7 days.

tag: strain

value: High Fat Diet for 16 weeks; DT treatment for 7 days

tag: tissue

value: Epidimal adipose tissue

value: stromal vascular fraction cells


title: Ctcflos KD deep 1


title: Sample 4_HFDCD169_DTR3_S18_L003


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019721_G1]

description: blood from survivor of childhood cancer

tag: gender

tag: age

tag: anthracyclines

tag: alkylating agent,classic


title: Sample 4_HFDCD169_DTR3_S18_L002


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019762_G1]

description: blood from survivor of childhood cancer

tag: corticosteroids

tag: epipodophyllotoxins

tag: vinca alkaloids

tag: asparaginase enzymes


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019722_G1]

description: blood from survivor of childhood cancer

tag: antimetabolites

tag: brainrt

tag: chestrt


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019792_G1]

description: blood from survivor of childhood cancer

tag: abdominalrt

tag: pelvicrt


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019720_G1]

description: blood from survivor of childhood cancer


title: Sample 4_HFDCD169_DTR3_S20_L002

tag: treatment

tag: cell type


title: Sample 4_HFDCD169_DTR3_S19_L003

tag: strain


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRB019818_G1]

description: blood from survivor of childhood cancer


title: Sample 3_HFDWT3_S9_L003

tag: tissue


title: Sample 4_HFDCD169_DTR3_S17_L002


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019747_G1]

description: blood from survivor of childhood cancer

tag: gender


title: Sample 4_HFDCD169_DTR3_S19_L002


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019752_G1]

description: blood from survivor of childhood cancer

tag: age


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019791_G1]

description: blood from survivor of childhood cancer

tag: anthracyclines


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019719_G1]

description: blood from survivor of childhood cancer

tag: alkylating agent,classic


title: Sample 3_HFDWT3_S7_L002


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019788_G1]

description: blood from survivor of childhood cancer

tag: corticosteroids


title: Sample 3_HFDWT3_S6_L002


title: Sample 3_HFDWT3_S8_L003


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019076_G1]

description: blood from survivor of childhood cancer

tag: epipodophyllotoxins


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019785_G1]

description: blood from survivor of childhood cancer

tag: vinca alkaloids


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019794_G1]

description: blood from survivor of childhood cancer

tag: asparaginase enzymes


title: Sample 3_HFDWT3_S7_L003


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019789_G1]

description: blood from survivor of childhood cancer

tag: antimetabolites


title: Sample 3_HFDWT3_S8_L002


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019710_G1]

description: blood from survivor of childhood cancer

tag: brainrt


title: Sample 2_NDCD169_DTR3_S5_L002

value: Normal Diet for 16 weeks; DT treatment for 7 days


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019811_G1]

description: blood from survivor of childhood cancer

tag: chestrt


title: Sample 2_NDCD169_DTR3_S5_L003


title: Sample 4_HFDCD169_DTR3_S17_L003


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNBL019805_G1]

description: blood from survivor of childhood cancer

tag: abdominalrt


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJWLM019839_G1]

description: blood from survivor of childhood cancer

tag: pelvicrt


title: Sample 2_NDCD169_DTR3_S16_L003

tag: treatment


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNHL019810_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS019814_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJEWS019771_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019777_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019736_G1]

description: blood from survivor of childhood cancer


title: Sample 1_NDWT3_S3_L002

tag: cell type


title: Sample 3_HFDWT3_S9_L002

tag: strain


title: Sample 2_NDCD169_DTR3_S15_L002

tag: tissue


title: Sample 2_NDCD169_DTR3_S16_L002


title: Sample 2_NDCD169_DTR3_S15_L003


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLGG001203_G1]

description: blood from survivor of childhood cancer

tag: gender


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019759_G1]

description: blood from survivor of childhood cancer

tag: age


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019766_G1]

description: blood from survivor of childhood cancer

tag: anthracyclines


title: Sample 2_NDCD169_DTR3_S14_L003


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019787_G1]

description: blood from survivor of childhood cancer

tag: alkylating agent,classic


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJLGG001211_G1]

description: blood from survivor of childhood cancer

tag: corticosteroids


title: Sample 1_NDWT3_S1_L002


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJNPC019800_G1]

description: blood from survivor of childhood cancer

tag: epipodophyllotoxins


title: Sample 2_NDCD169_DTR3_S14_L002


title: Sample 1_NDWT3_S4_L003


title: Sample 3_HFDWT3_S6_L003


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCA019767_G1]

description: blood from survivor of childhood cancer

tag: vinca alkaloids


title: Sample 1_NDWT3_S4_L002


title: RSD 38

city: Rome

first: Luisa

last: Lo Iacono

address: via del fosso di Fiorano 64

department: behavioral neuroscience

country: Italy

institute: Fondazione Santa Lucia IRCCS

data_processing:
Illumina novaSeq base call (BCL) files were converted in fastq file through bcl2fastq(version v2.20.0.422)
Sequence reads were trimmed using bbduk software[2] (bbmap suite 37.31) to remove adapter sequences, poly-A tails and low-quality end bases (regions with average quality below 6)
Alignment was performed with STAR 2.6.0a on rn6 assembly downloaded from UCSC Genome Browser website
The expression levels of genes were determined with htseq-count 0.9.1 by using Ensembl genes annotations (Version 6.0).
Individual sample counts were normalized via Relative Log Expression (RLE) using DESeq2 R library
Genome_build: rn6 genome from UCSC genome browser
Supplementary_files_format_and_content: excl file including raw gene counts values for each sample in a matrix. We remove all genes having Perc MM reads > 20% and the genes having < 1 cpm in less than n_min1 samples.  All the genes not passing either of the filters are indicated in the column “Removed gene” with TRUE.

organism: Rattus norvegicus

source_name: Heart

extract_protocol:
Hearts were excised, flash frozen on dry ice, and punches form left ventricles were dissected. RNA was extracted using Norgen minicolumn ( Total RNA purification Kit) and quality checked via Agilent  2100 bioanalyzer assay
Libraries were prepared from 100ng of total RNA using the QuantSeq 3' mRNA-Seq Library Prep Kit FWD for Illumina (Lexogen GmbH). Libraries were sequenced on a NovaSeq 6000 sequencing system using an S1, 100 cycles flow cell (Illumina Inc.)
RNA-Seq (mRNA 3' Digital Gene Expression)

treatment_protocol: Social defeat stress was based on a classical “resident–intruder” paradigm (Miczeck, 1979), The defeat sessions were repeated for 8 consecutive days.

value: wild-type Groningen rats

value: Heart - left ventricle

tag: Sex

value: male

value: adult

value: Repeated Social Defeated (RSD)


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL003454_G1]

description: blood from survivor of childhood cancer

value: Male

tag: asparaginase enzymes

tag: antimetabolites


title: Sample 1_NDWT3_S2_L003


title: Sample 1_NDWT3_S2_L002


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJCNS019755_G1]

description: blood from survivor of childhood cancer

tag: brainrt

tag: chestrt


title: KMS12PE cells treated with 2 μM melphalan for 5 days

type: RNA

city: Maebashi

first: Tsukasa

last: Oda

state: Gunma

address: Showa-machi, 3-39-15

department: IMCR

country: Japan

institute: Gunma University

description: Gene expression after 5 days in melphalan-treated KMS12PE cells

hyb_protocol: Cy3-labelled cRNA (specific activity >6 pmol Cy3/ug cRNA) was fragmented. Hybridization and wash were performed using Gene Expression Wash Pack (5188-5327:Agilent)

scan_protocol: Slides were scanned on the Agilent DNA Microarray Scanner using one color scan setting

data_processing: The scanned images were analyzed with Feature Extraction Software 9.1 (Agilent)

label_protocol: Cyanine-3 (Cy3) labeled cRNA was prepared from 100 ng RNA using the One-Color Low Input Quick Amp Labeling kit (5190-2305: Agilent) according to the manufacturer's instructions, followed by RNAeasy mini kit (QIAGEN).  Dye incorporation and cRNA yield were checked with the NanoDrop ND-1000 Spectrophotometer.

growth_protocol: Multiple myeloma cell line KMS12PE was cultured in RPMI 1640 medium supplemented with 10% heat-inactivated fetal bovine serum.  The cultures were incubated at 37 ºC in a humidified incubator with 5% CO2.

extract_protocol: Total RNA was prepared using the RNeasy Mini kit (QIAGEN, Hilden, Germany). RNA was quantified using a NanoDrop-1000 spectrophotometer and quality was monitored with the Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA).

treatment_protocol: KMS12PE cells were treated with vehicle, 2 μM melphalan, or 50 nM adriamycin for 5 days.

value: 2 μM melphalan, 5days


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019748_G1]

description: blood from survivor of childhood cancer

value: Female

tag: abdominalrt

tag: pelvicrt


title: CTR 27

tag: treatment

value: Unhandled control


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJACT019754_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019723_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL004736_G1]

description: blood from survivor of childhood cancer


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019741_G1]

description: blood from survivor of childhood cancer


title: RSD 40

tag: strain

value: female


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019715_G1]

description: blood from survivor of childhood cancer


title: Sample 1_NDWT3_S3_L003

tag: tissue

tag: cell type


title: CTR 25

tag: age

value: unhandled control


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB019835_G1]

description: blood from survivor of childhood cancer

tag: gender

tag: anthracyclines


title: CTR 24


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRB019829_G1]

description: blood from survivor of childhood cancer

tag: alkylating agent,classic

tag: corticosteroids


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJOS019813_G1]

description: blood from survivor of childhood cancer

tag: epipodophyllotoxins

tag: vinca alkaloids


title: KMS12PE cells treated with 50 nM adriamycin for 5 days

description: Gene expression after 5 days in adriamycin-treated KMS12PE cells

value: 50 nM adriamycin, 5days


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJHL019786_G1]

description: blood from survivor of childhood cancer

tag: asparaginase enzymes


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJRHB019833_G1]

description: blood from survivor of childhood cancer

tag: antimetabolites


title: KMS12PE cells treated with vehicle for 5 days

description: Gene expression after 5 days in vehicle-treated KMS12PE cells

value: vehicle, 5days


title: RSD 39

tag: Sex


title: Sample 1_NDWT3_S1_L003


title: RSD 35


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJALL019733_G1]

description: blood from survivor of childhood cancer

tag: brainrt

tag: chestrt


title: genomic DNA derived from blood samples from survivor of childhood cancer [SJSTS018855_G1]

description: blood from survivor of childhood cancer

tag: abdominalrt

tag: pelvicrt