title: Histone ChIP-seq from skin epidermis (ENCLB360EGE)

description:
https://www.encodeproject.org/experiments/ENCSR386CKJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq of skin epidermis male adult (75 years). Note that tissue excised from donor is adjacent epidermis from Mohs cancer removal procedure.
experiment encode accession: ENCSR386CKJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR704QBF
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB360EGE
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (75 years) skin epidermis tissue

value: tissue

value: keratinocyte carcinoma surgical removal

value: 75 year

value: ENCBS497HUD at ENCODE; https://www.encodeproject.org/ENCBS497HUD/

value: Derived from ENCODE donor ENCDO317WFZ; https://www.encodeproject.org/ENCDO317WFZ/


title: Histone ChIP-seq from skin epidermis (ENCLB760XWT)

status: Public on Feb 27 2021

type: SRA

city: Stanford

first: ENCODE

last: DCC

state: CA

address: 300 Pasteur Dr

country: USA

institute: ENCODE DCC

description:
https://www.encodeproject.org/experiments/ENCSR835YED/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq of skin epidermis male adult (77 years). Note that tissue excised from donor is adjacent epidermis from Mohs cancer removal procedure.
experiment encode accession: ENCSR835YED
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR247FUH
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB760XWT
fragmentation methods: none
size range: 200-600

library_source: genomic

data_processing: See GSM*_README.txt supplementary file linked below

molecule: genomic DNA

organism: Homo sapiens

source_name: Homo sapiens male adult (77 years) skin epidermis tissue

tag: antibody

value: skin epidermis

tag: description

value: tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari. These cells contain no tumor.

tag: biosample encode accession

tag: Sex

value: male

tag: health state

tag: dev stage

value: adult

tag: age

value: 77 year

tag: lab

value: Bradley Bernstein, Broad

tag: source

value: Maryam M. Asgari, MD, MPH

tag: link

value: ENCBS488CYF at ENCODE; https://www.encodeproject.org/ENCBS488CYF/

value: Derived from ENCODE donor ENCDO739SDJ; https://www.encodeproject.org/ENCDO739SDJ/


title: Histone ChIP-seq from spleen (ENCLB913IRK)

description:
https://www.encodeproject.org/experiments/ENCSR907JPV/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on spleen male adult (26 years)
experiment encode accession: ENCSR907JPV
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR200QAA
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB913IRK
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (26 years) spleen tissue, preserved by flash-freezing

value: spleen

value: DM:no; HTN:no; CAD:no

value: 26 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS498SQU at ENCODE; https://www.encodeproject.org/ENCBS498SQU/

value: Derived from ENCODE donor ENCDO221IPH; https://www.encodeproject.org/ENCDO221IPH/


title: Control ChIP-seq from skin epidermis (ENCLB264DTY)

description:
https://www.encodeproject.org/experiments/ENCSR126UEY/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of skin epidermis female adult (71 years). Note that tissue excised from donor is adjacent epidermis from Mohs cancer removal procedure.
experiment encode accession: ENCSR126UEY
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB264DTY
size range: 200-600

source_name: Homo sapiens female adult (71 years) skin epidermis tissue

value: tissue

value: female

value: keratinocyte carcinoma surgical removal

value: 71 year

value: ENCBS823ZBL at ENCODE; https://www.encodeproject.org/ENCBS823ZBL/

value: Derived from ENCODE donor ENCDO588YPS; https://www.encodeproject.org/ENCDO588YPS/


title: Histone ChIP-seq from heart right ventricle (ENCLB191RBT)

description:
https://www.encodeproject.org/experiments/ENCSR900SJW/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on heart right ventricle female adult (46 years)
experiment encode accession: ENCSR900SJW
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR519UXW
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB191RBT
fragmentation methods: sonication (generic)
size range: 200-600
nucleic acid starting quantity: 12
nucleic acid starting quantity units: ng

source_name: Homo sapiens female adult (46 years) heart right ventricle tissue, preserved by flash-freezing

value: heart right ventricle

value: adult

value: 46 year

value: ENCBS824CUX at ENCODE; https://www.encodeproject.org/ENCBS824CUX/

value: Derived from ENCODE donor ENCDO411EVD; https://www.encodeproject.org/ENCDO411EVD/


title: Histone ChIP-seq from spleen (ENCLB244RSG)

description:
https://www.encodeproject.org/experiments/ENCSR377ILM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR377ILM
assay title: Histone ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR803JPO
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB244RSG
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (54 years) spleen tissue

value: spleen

value: male

value: 54 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS223WIE at ENCODE; https://www.encodeproject.org/ENCBS223WIE/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Control ChIP-seq from heart left ventricle (ENCLB267VRC)

description:
https://www.encodeproject.org/experiments/ENCSR403VPZ/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on heart left ventricle female adult (46 years)
experiment encode accession: ENCSR403VPZ
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB267VRC
size range: 200-600

source_name: Homo sapiens female adult (46 years) heart left ventricle tissue, preserved by flash-freezing

value: heart left ventricle

value: tissue

value: female

value: DM:no; HTN:no; CAD:no

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS273XUE at ENCODE; https://www.encodeproject.org/ENCBS273XUE/


title: Histone ChIP-seq from spleen (ENCLB738EJL)

description:
https://www.encodeproject.org/experiments/ENCSR831EDZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR831EDZ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB738EJL
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (51 years) spleen tissue

value: adult

value: 51 year

value: ENCBS363GBQ at ENCODE; https://www.encodeproject.org/ENCBS363GBQ/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from heart right ventricle (ENCLB467OPN)

description:
https://www.encodeproject.org/experiments/ENCSR900SJW/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on heart right ventricle female adult (46 years)
experiment encode accession: ENCSR900SJW
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR519UXW
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB467OPN
fragmentation methods: sonication (generic)
size range: 200-600
nucleic acid starting quantity: 12
nucleic acid starting quantity units: ng

value: heart right ventricle

value: 46 year

value: ENCBS824CUX at ENCODE; https://www.encodeproject.org/ENCBS824CUX/

value: Derived from ENCODE donor ENCDO411EVD; https://www.encodeproject.org/ENCDO411EVD/


title: Histone ChIP-seq from spleen (ENCLB021PET)

description:
https://www.encodeproject.org/experiments/ENCSR831EDZ/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR831EDZ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB021PET
fragmentation methods: sonication (generic)
size range: 200-600

value: spleen

value: Bradley Bernstein, Broad

value: Kristin Ardlie


title: Histone ChIP-seq from spleen (ENCLB895QPV)

description:
https://www.encodeproject.org/experiments/ENCSR589DBF/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR589DBF
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB895QPV
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue


title: Histone ChIP-seq from spleen (ENCLB124FAP)

description:
https://www.encodeproject.org/experiments/ENCSR377ILM/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR377ILM
assay title: Histone ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR803JPO
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB124FAP
fragmentation methods: none
size range: 200-600

value: male

value: 54 year

value: ENCBS223WIE at ENCODE; https://www.encodeproject.org/ENCBS223WIE/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from heart right ventricle (ENCLB548TTQ)

description:
https://www.encodeproject.org/experiments/ENCSR596TFH/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on heart right ventricle female adult (46 years)
experiment encode accession: ENCSR596TFH
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR519UXW
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB548TTQ
fragmentation methods: sonication (generic)
size range: 200-600

value: female

value: DM:no; HTN:no; CAD:no

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD


title: Histone ChIP-seq from spleen (ENCLB847BKD)

description:
https://www.encodeproject.org/experiments/ENCSR589DBF/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR589DBF
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB847BKD
fragmentation methods: sonication (generic)
size range: 200-600

value: adult

value: 51 year

value: ENCBS363GBQ at ENCODE; https://www.encodeproject.org/ENCBS363GBQ/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from heart right ventricle (ENCLB687VSU)

description:
https://www.encodeproject.org/experiments/ENCSR236KOX/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on heart right ventricle male adult (40 years)
experiment encode accession: ENCSR236KOX
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR839VEU
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB687VSU
fragmentation methods: sonication (generic)
size range: 200-600
nucleic acid starting quantity: 65
nucleic acid starting quantity units: ng

source_name: Homo sapiens male adult (40 years) heart right ventricle tissue, preserved by flash-freezing

value: heart right ventricle

value: DM:no; HTN:yes; CAD:no

value: 40 year

value: ENCBS480XPH at ENCODE; https://www.encodeproject.org/ENCBS480XPH/

value: Derived from ENCODE donor ENCDO392CRK; https://www.encodeproject.org/ENCDO392CRK/


title: Histone ChIP-seq from pancreas (ENCLB278GIU)

description:
https://www.encodeproject.org/experiments/ENCSR245GEV/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on pancreas female adult (61 years)
experiment encode accession: ENCSR245GEV
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR130HAG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB278GIU
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (61 years) pancreas tissue, preserved by flash-freezing

value: pancreas

value: tissue

value: DM:no; HTN:no; CAD:no; lungs with moderate emphysema

value: 61 year

value: ENCBS297KRV at ENCODE; https://www.encodeproject.org/ENCBS297KRV/

value: Derived from ENCODE donor ENCDO186XRB; https://www.encodeproject.org/ENCDO186XRB/


title: Control ChIP-seq from skin epidermis (ENCLB895DJQ)

description:
https://www.encodeproject.org/experiments/ENCSR111ZAD/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of keratinocyte basal cell carcinoma female adult (48 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR111ZAD
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB895DJQ
size range: 200-600

source_name: Homo sapiens female adult (48 years) skin epidermis tissue with basal cell carcinoma

value: skin epidermis

value: BCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: female

value: keratinocyte carcinoma surgical removal. transplant recipient, iatrogenically immunosuppressed

value: 48 year

value: Bradley Bernstein, Broad

value: Maryam M. Asgari, MD, MPH

value: ENCBS365XEJ at ENCODE; https://www.encodeproject.org/ENCBS365XEJ/

value: Derived from ENCODE donor ENCDO615YQP; https://www.encodeproject.org/ENCDO615YQP/


title: Histone ChIP-seq from heart right ventricle (ENCLB912NHE)

description:
https://www.encodeproject.org/experiments/ENCSR236KOX/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on heart right ventricle male adult (40 years)
experiment encode accession: ENCSR236KOX
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR839VEU
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB912NHE
fragmentation methods: sonication (generic)
size range: 200-600
nucleic acid starting quantity: 65
nucleic acid starting quantity units: ng

value: heart right ventricle

value: male

value: DM:no; HTN:yes; CAD:no

value: adult

value: 40 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS480XPH at ENCODE; https://www.encodeproject.org/ENCBS480XPH/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB519VTU)

description:
https://www.encodeproject.org/experiments/ENCSR261ZUW/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 ChIP-seq on lower lobe of left lung male adult (60 years)
experiment encode accession: ENCSR261ZUW
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR089ZLR
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB519VTU
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (60 years) lower lobe of left lung tissue, preserved by flash-freezing

value: lower lobe of left lung

value: tissue

value: DM:no; HTN:yes; CAD:no; lungs with severe emphysema

value: 60 year

value: ENCBS105KGA at ENCODE; https://www.encodeproject.org/ENCBS105KGA/

value: Derived from ENCODE donor ENCDO520EJG; https://www.encodeproject.org/ENCDO520EJG/


title: Histone ChIP-seq from heart right ventricle (ENCLB876QQO)

description:
https://www.encodeproject.org/experiments/ENCSR596TFH/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on heart right ventricle female adult (46 years)
experiment encode accession: ENCSR596TFH
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR519UXW
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB876QQO
fragmentation methods: sonication (generic)
size range: 200-600

value: female

value: DM:no; HTN:no; CAD:no

value: 46 year

value: ENCBS824CUX at ENCODE; https://www.encodeproject.org/ENCBS824CUX/

value: Derived from ENCODE donor ENCDO411EVD; https://www.encodeproject.org/ENCDO411EVD/


title: Histone ChIP-seq from spleen (ENCLB731MOY)

description:
https://www.encodeproject.org/experiments/ENCSR826MTK/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR826MTK
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB731MOY
fragmentation methods: sonication (generic)
size range: 200-600

value: spleen

value: 51 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS363GBQ at ENCODE; https://www.encodeproject.org/ENCBS363GBQ/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from spleen (ENCLB006GOC)

description:
https://www.encodeproject.org/experiments/ENCSR826MTK/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR826MTK
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB006GOC
fragmentation methods: sonication (generic)
size range: 200-600
instrument models: Illumina HiSeq 2500,Illumina NextSeq 500

value: adult

value: ENCBS892ESJ at ENCODE; https://www.encodeproject.org/ENCBS892ESJ/


title: Histone ChIP-seq from spleen (ENCLB999FXV)

description:
https://www.encodeproject.org/experiments/ENCSR593INW/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR593INW
assay title: Histone ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR803JPO
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB999FXV
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue

value: male

value: 54 year

value: ENCBS949QWK at ENCODE; https://www.encodeproject.org/ENCBS949QWK/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from uterus (ENCLB419MVZ)

description:
https://www.encodeproject.org/experiments/ENCSR588FQI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR588FQI
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR859LXC
encode release date: 2019-02-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB419MVZ
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (51 year) uterus tissue

value: uterus

value: female

value: ENCBS443NGH at ENCODE; https://www.encodeproject.org/ENCBS443NGH/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB678POE)

description:
https://www.encodeproject.org/experiments/ENCSR218YUS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR218YUS
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR846VGG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB678POE
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (59 years) lower lobe of left lung tissue, preserved by flash-freezing

value: lower lobe of left lung

value: DM:yes; HTN:yes; CAD:no

value: 59 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS493HET at ENCODE; https://www.encodeproject.org/ENCBS493HET/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: Histone ChIP-seq from spleen (ENCLB579POQ)

description:
https://www.encodeproject.org/experiments/ENCSR479APW/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on spleen male adult (26 years)
experiment encode accession: ENCSR479APW
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR200QAA
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB579POQ
fragmentation methods: sonication (generic)
size range: 200-600

value: spleen

value: DM:no; HTN:no; CAD:no

value: adult

value: 26 year

value: ENCBS498SQU at ENCODE; https://www.encodeproject.org/ENCBS498SQU/

value: Derived from ENCODE donor ENCDO221IPH; https://www.encodeproject.org/ENCDO221IPH/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB852PJN)

description:
https://www.encodeproject.org/experiments/ENCSR218YUS/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR218YUS
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR846VGG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB852PJN
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue


title: Histone ChIP-seq from spleen (ENCLB802QQD)

description:
https://www.encodeproject.org/experiments/ENCSR593INW/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR593INW
assay title: Histone ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR803JPO
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB802QQD
fragmentation methods: sonication (generic)
size range: 200-600

value: male

value: 54 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS949QWK at ENCODE; https://www.encodeproject.org/ENCBS949QWK/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from spleen (ENCLB530QEE)

description:
https://www.encodeproject.org/experiments/ENCSR826MTK/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR826MTK
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB530QEE
fragmentation methods: sonication (generic)
size range: 200-600

value: female

value: 51 year

value: ENCBS363GBQ at ENCODE; https://www.encodeproject.org/ENCBS363GBQ/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Control ChIP-seq from heart left ventricle (ENCLB462ZGC)

description:
https://www.encodeproject.org/experiments/ENCSR403VPZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on heart left ventricle female adult (46 years)
experiment encode accession: ENCSR403VPZ
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB462ZGC
size range: 200-600

value: heart left ventricle

value: 46 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS273XUE at ENCODE; https://www.encodeproject.org/ENCBS273XUE/

value: Derived from ENCODE donor ENCDO411EVD; https://www.encodeproject.org/ENCDO411EVD/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB095KSQ)

description:
https://www.encodeproject.org/experiments/ENCSR875OQJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on lower lobe of left lung male adult (60 years)
experiment encode accession: ENCSR875OQJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR089ZLR
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB095KSQ
fragmentation methods: sonication (generic)
size range: 200-600

value: lower lobe of left lung

value: tissue

value: DM:no; HTN:yes; CAD:no; lungs with severe emphysema

value: adult

value: 60 year

value: ENCBS105KGA at ENCODE; https://www.encodeproject.org/ENCBS105KGA/

value: Derived from ENCODE donor ENCDO520EJG; https://www.encodeproject.org/ENCDO520EJG/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB742HND)

description:
https://www.encodeproject.org/experiments/ENCSR875OQJ/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on lower lobe of left lung male adult (60 years)
experiment encode accession: ENCSR875OQJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR089ZLR
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB742HND
fragmentation methods: sonication (generic)
size range: 200-600

value: male


title: Histone ChIP-seq from uterus (ENCLB549WWS)

description:
https://www.encodeproject.org/experiments/ENCSR588FQI/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR588FQI
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR859LXC
encode release date: 2019-02-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB549WWS
fragmentation methods: sonication (generic)
size range: 200-600

value: uterus

value: female

value: 51 year

value: Bradley Bernstein, Broad

value: ENCBS443NGH at ENCODE; https://www.encodeproject.org/ENCBS443NGH/


title: Histone ChIP-seq from gastrocnemius medialis (ENCLB154QDL)

description:
https://www.encodeproject.org/experiments/ENCSR098OLN/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR098OLN
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR138WRC
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB154QDL
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (51 years) gastrocnemius medialis tissue

value: gastrocnemius medialis

value: i.e. REMC 6, 13, 14 and 15; EnTEX:Muscle - Skeletal also gastrocnemius medialis\n

value: Kristin Ardlie

value: ENCBS640TBC at ENCODE; https://www.encodeproject.org/ENCBS640TBC/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from pancreas (ENCLB460RAI)

description:
https://www.encodeproject.org/experiments/ENCSR211SBE/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on pancreas female adult (61 years)
experiment encode accession: ENCSR211SBE
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR130HAG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB460RAI
fragmentation methods: sonication (generic)
size range: 200-600

value: pancreas

value: tissue

value: DM:no; HTN:no; CAD:no; lungs with moderate emphysema

value: 61 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS297KRV at ENCODE; https://www.encodeproject.org/ENCBS297KRV/

value: Derived from ENCODE donor ENCDO186XRB; https://www.encodeproject.org/ENCDO186XRB/


title: Histone ChIP-seq from gastrocnemius medialis (ENCLB235BJQ)

description:
https://www.encodeproject.org/experiments/ENCSR098OLN/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR098OLN
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR138WRC
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB235BJQ
fragmentation methods: sonication (generic)
size range: 200-600

value: female

value: adult


title: Histone ChIP-seq from tibial nerve (ENCLB533NXK)

description:
https://www.encodeproject.org/experiments/ENCSR662ASZ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR662ASZ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR152HLZ
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB533NXK
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (54 years) tibial nerve tissue

value: tibial nerve

value: EnTEX:Nerve - Tibial

value: male

value: 54 year

value: Bradley Bernstein, Broad

value: ENCBS952IFF at ENCODE; https://www.encodeproject.org/ENCBS952IFF/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from left lung (ENCLB396FIJ)

description:
https://www.encodeproject.org/experiments/ENCSR157JGF/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K9me3 ChIP-seq on left lung male adult (40 years)
experiment encode accession: ENCSR157JGF
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR936CZX
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB396FIJ
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (40 years) left lung tissue, preserved by flash-freezing

value: left lung

value: DM:no; HTN:yes; CAD:no

value: 40 year

value: ENCBS628ZUJ at ENCODE; https://www.encodeproject.org/ENCBS628ZUJ/

value: Derived from ENCODE donor ENCDO392CRK; https://www.encodeproject.org/ENCDO392CRK/


title: Control ChIP-seq from spleen (ENCLB359WMH)

description:
https://www.encodeproject.org/experiments/ENCSR200QAA/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on spleen male adult (26 years)
experiment encode accession: ENCSR200QAA
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB359WMH
size range: 200-600

value: spleen

value: tissue

value: DM:no; HTN:no; CAD:no

value: 26 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS498SQU at ENCODE; https://www.encodeproject.org/ENCBS498SQU/

value: Derived from ENCODE donor ENCDO221IPH; https://www.encodeproject.org/ENCDO221IPH/


title: Histone ChIP-seq from left lung (ENCLB749DEH)

description:
https://www.encodeproject.org/experiments/ENCSR157JGF/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K9me3 ChIP-seq on left lung male adult (40 years)
experiment encode accession: ENCSR157JGF
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR936CZX
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB749DEH
fragmentation methods: sonication (generic)
size range: 200-600

value: male

value: adult


title: Histone ChIP-seq from tibial artery (ENCLB788YIU)

description:
https://www.encodeproject.org/experiments/ENCSR360UUM/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR360UUM
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR714GXC
encode release date: 2019-02-12
lab: Bradley Bernstein, Broad
library encode accession: ENCLB788YIU
fragmentation methods: none
size range: 200-600

source_name: Homo sapiens female adult (51 years) tibial artery tissue

value: tibial artery

value: EnTEX:Artery - Tibial

value: female

value: 51 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS636NCW at ENCODE; https://www.encodeproject.org/ENCBS636NCW/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from gastroesophageal sphincter (ENCLB190UYK)

description:
https://www.encodeproject.org/experiments/ENCSR364YAY/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR364YAY
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR728EIP
encode release date: 2019-08-01
lab: Bradley Bernstein, Broad
library encode accession: ENCLB190UYK
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (54 years) gastroesophageal sphincter tissue

value: gastroesophageal sphincter

value: tissue

value: EnTEX:Esophagus - Gastroesophageal Junction

value: 54 year

value: ENCBS542QYP at ENCODE; https://www.encodeproject.org/ENCBS542QYP/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from gastroesophageal sphincter (ENCLB965OUM)

description:
https://www.encodeproject.org/experiments/ENCSR364YAY/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR364YAY
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR728EIP
encode release date: 2019-08-01
lab: Bradley Bernstein, Broad
library encode accession: ENCLB965OUM
fragmentation methods: sonication (generic)
size range: 200-600


title: Histone ChIP-seq from tibial artery (ENCLB658ZVD)

description:
https://www.encodeproject.org/experiments/ENCSR360UUM/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR360UUM
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR714GXC
encode release date: 2019-02-12
lab: Bradley Bernstein, Broad
library encode accession: ENCLB658ZVD
fragmentation methods: none
size range: 200-600


title: Histone ChIP-seq from lower lobe of left lung (ENCLB081DQM)

description:
https://www.encodeproject.org/experiments/ENCSR155EOT/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR155EOT
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR846VGG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB081DQM
fragmentation methods: sonication (generic)
size range: 200-600

value: lower lobe of left lung

value: DM:yes; HTN:yes; CAD:no

value: 59 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS493HET at ENCODE; https://www.encodeproject.org/ENCBS493HET/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB580UCI)

description:
https://www.encodeproject.org/experiments/ENCSR155EOT/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR155EOT
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR846VGG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB580UCI
fragmentation methods: sonication (generic)
size range: 200-600

value: female

value: adult


title: Control ChIP-seq from skin epidermis (ENCLB951XFX)

description:
https://www.encodeproject.org/experiments/ENCSR583XAM/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of keratinocyte squamous cell carcinoma male adult (84 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR583XAM
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB951XFX
size range: 200-600

source_name: Homo sapiens male adult (84 years) skin epidermis tissue with squamous cell carcinoma

value: skin epidermis

value: SCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: male

value: keratinocyte carcinoma surgical removal

value: 84 year

value: Bradley Bernstein, Broad

value: Maryam M. Asgari, MD, MPH

value: ENCBS238CLI at ENCODE; https://www.encodeproject.org/ENCBS238CLI/

value: Derived from ENCODE donor ENCDO799UNP; https://www.encodeproject.org/ENCDO799UNP/


title: Histone ChIP-seq from pancreas (ENCLB114IZU)

description:
https://www.encodeproject.org/experiments/ENCSR868ZOR/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on pancreas female adult (59 years)
experiment encode accession: ENCSR868ZOR
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR490NCK
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB114IZU
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (59 years) pancreas tissue, preserved by flash-freezing

value: pancreas

value: tissue

value: DM:yes; HTN:yes; CAD:no

value: ENCBS483KZB at ENCODE; https://www.encodeproject.org/ENCBS483KZB/


title: Histone ChIP-seq from skin epidermis (ENCLB903AIH)

description:
https://www.encodeproject.org/experiments/ENCSR822EOS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq of keratinocyte squamous cell carcinoma female adult (80 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR822EOS
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR966IGL
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB903AIH
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (80 years) skin epidermis tissue with squamous cell carcinoma

value: 80 year

value: ENCBS741KVA at ENCODE; https://www.encodeproject.org/ENCBS741KVA/

value: Derived from ENCODE donor ENCDO856JFL; https://www.encodeproject.org/ENCDO856JFL/


title: Histone ChIP-seq from spleen (ENCLB733RBC)

description:
https://www.encodeproject.org/experiments/ENCSR080JPX/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR080JPX
assay title: Histone ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR803JPO
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB733RBC
fragmentation methods: none
size range: 200-600

source_name: Homo sapiens male adult (54 years) spleen tissue

value: spleen

value: adult

value: 54 year

value: Kristin Ardlie

value: ENCBS223WIE at ENCODE; https://www.encodeproject.org/ENCBS223WIE/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from pancreas (ENCLB566MEN)

description:
https://www.encodeproject.org/experiments/ENCSR868ZOR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on pancreas female adult (59 years)
experiment encode accession: ENCSR868ZOR
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR490NCK
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB566MEN
fragmentation methods: sonication (generic)
size range: 200-600

value: female

value: 59 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: Histone ChIP-seq from spleen (ENCLB118EMN)

description:
https://www.encodeproject.org/experiments/ENCSR080JPX/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR080JPX
assay title: Histone ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR803JPO
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB118EMN
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue

value: male

value: Bradley Bernstein, Broad


title: Histone ChIP-seq from lower lobe of left lung (ENCLB333IRM)

description:
https://www.encodeproject.org/experiments/ENCSR152VOJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR152VOJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR846VGG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB333IRM
fragmentation methods: sonication (generic)
size range: 200-600

value: lower lobe of left lung

value: DM:yes; HTN:yes; CAD:no

value: ENCBS493HET at ENCODE; https://www.encodeproject.org/ENCBS493HET/


title: Histone ChIP-seq from sigmoid colon (ENCLB017BWQ)

description:
https://www.encodeproject.org/experiments/ENCSR793IKH/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR793IKH
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR316ZPQ
encode release date: 2019-02-12
lab: Bradley Bernstein, Broad
library encode accession: ENCLB017BWQ
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (51 years) sigmoid colon tissue

value: sigmoid colon

value: EnTEX:Colon - Sigmoid

value: 51 year

value: ENCBS474RXX at ENCODE; https://www.encodeproject.org/ENCBS474RXX/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB238TEA)

description:
https://www.encodeproject.org/experiments/ENCSR152VOJ/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR152VOJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR846VGG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB238TEA
fragmentation methods: sonication (generic)
size range: 200-600

value: adult


title: Histone ChIP-seq from sigmoid colon (ENCLB397HXG)

description:
https://www.encodeproject.org/experiments/ENCSR793IKH/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR793IKH
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR316ZPQ
encode release date: 2019-02-12
lab: Bradley Bernstein, Broad
library encode accession: ENCLB397HXG
fragmentation methods: sonication (generic)
size range: 200-600

value: female

value: Kristin Ardlie


title: Histone ChIP-seq from left lung (ENCLB491AFI)

description:
https://www.encodeproject.org/experiments/ENCSR864ECD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on left lung male adult (40 years)
experiment encode accession: ENCSR864ECD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR936CZX
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB491AFI
fragmentation methods: sonication (generic)
size range: 200-600

value: left lung

value: DM:no; HTN:yes; CAD:no

value: 40 year

value: Michael Snyder, Stanford

value: ENCBS628ZUJ at ENCODE; https://www.encodeproject.org/ENCBS628ZUJ/

value: Derived from ENCODE donor ENCDO392CRK; https://www.encodeproject.org/ENCDO392CRK/


title: Histone ChIP-seq from heart left ventricle (ENCLB082INF)

description:
https://www.encodeproject.org/experiments/ENCSR863BVD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on heart left ventricle female adult (46 years)
experiment encode accession: ENCSR863BVD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR403VPZ
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB082INF
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (46 years) heart left ventricle tissue, preserved by flash-freezing

value: heart left ventricle

value: tissue

value: DM:no; HTN:no; CAD:no

value: 46 year

value: Yiing Lin, MD, PhD

value: ENCBS273XUE at ENCODE; https://www.encodeproject.org/ENCBS273XUE/

value: Derived from ENCODE donor ENCDO411EVD; https://www.encodeproject.org/ENCDO411EVD/


title: Histone ChIP-seq from pancreas (ENCLB484EUF)

description:
https://www.encodeproject.org/experiments/ENCSR211SBE/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on pancreas female adult (61 years)
experiment encode accession: ENCSR211SBE
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR130HAG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB484EUF
fragmentation methods: sonication (generic)
size range: 200-600

value: pancreas

value: DM:no; HTN:no; CAD:no; lungs with moderate emphysema

value: 61 year

value: ENCBS297KRV at ENCODE; https://www.encodeproject.org/ENCBS297KRV/

value: Derived from ENCODE donor ENCDO186XRB; https://www.encodeproject.org/ENCDO186XRB/


title: Histone ChIP-seq from heart left ventricle (ENCLB607ZXC)

description:
https://www.encodeproject.org/experiments/ENCSR863BVD/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on heart left ventricle female adult (46 years)
experiment encode accession: ENCSR863BVD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR403VPZ
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB607ZXC
fragmentation methods: sonication (generic)
size range: 200-600

value: female

value: adult


title: Histone ChIP-seq from left lung (ENCLB540YGN)

description:
https://www.encodeproject.org/experiments/ENCSR864ECD/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on left lung male adult (40 years)
experiment encode accession: ENCSR864ECD
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR936CZX
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB540YGN
fragmentation methods: sonication (generic)
size range: 200-600

value: left lung

value: male

value: DM:no; HTN:yes; CAD:no

value: 40 year

value: Michael Snyder, Stanford


title: Histone ChIP-seq from gastrocnemius medialis (ENCLB630HYL)

description:
https://www.encodeproject.org/experiments/ENCSR098OLN/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR098OLN
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR138WRC
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB630HYL
fragmentation methods: sonication (generic)
size range: 200-600

value: gastrocnemius medialis

value: tissue

value: i.e. REMC 6, 13, 14 and 15; EnTEX:Muscle - Skeletal also gastrocnemius medialis

value: 51 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS731GTN at ENCODE; https://www.encodeproject.org/ENCBS731GTN/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from pancreas (ENCLB231QLR)

description:
https://www.encodeproject.org/experiments/ENCSR137ZID/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on pancreas female adult (41 years)
experiment encode accession: ENCSR137ZID
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR462ZQL
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB231QLR
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (41 years) pancreas tissue, preserved by flash-freezing

value: pancreas

value: DM:no; HTN:no; CAD:no

value: 41 year

value: Yiing Lin, MD, PhD

value: ENCBS212NYF at ENCODE; https://www.encodeproject.org/ENCBS212NYF/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: Histone ChIP-seq from spleen (ENCLB473TOD)

description:
https://www.encodeproject.org/experiments/ENCSR401KZW/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on spleen male adult (26 years)
experiment encode accession: ENCSR401KZW
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR200QAA
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB473TOD
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (26 years) spleen tissue, preserved by flash-freezing

value: spleen

value: male

value: adult

value: 26 year

value: ENCBS498SQU at ENCODE; https://www.encodeproject.org/ENCBS498SQU/

value: Derived from ENCODE donor ENCDO221IPH; https://www.encodeproject.org/ENCDO221IPH/


title: Control ChIP-seq from skin epidermis (ENCLB484XFH)

description:
https://www.encodeproject.org/experiments/ENCSR564GJK/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of keratinocyte basal cell carcinoma male adult (58 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR564GJK
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB484XFH
size range: 200-600

source_name: Homo sapiens male adult (58 years) skin epidermis tissue with basal cell carcinoma

value: skin epidermis

value: tissue

value: BCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: keratinocyte carcinoma surgical removal. transplant recipient, iatrogenically immunosuppressed

value: 58 year

value: Maryam M. Asgari, MD, MPH

value: ENCBS486NQD at ENCODE; https://www.encodeproject.org/ENCBS486NQD/

value: Derived from ENCODE donor ENCDO536XJQ; https://www.encodeproject.org/ENCDO536XJQ/


title: Control ChIP-seq from skin epidermis (ENCLB223IWP)

description:
https://www.encodeproject.org/experiments/ENCSR785LQK/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of keratinocyte basal cell carcinoma male adult (65 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR785LQK
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB223IWP
size range: 200-600

source_name: Homo sapiens male adult (65 years) skin epidermis tissue with basal cell carcinoma

value: 65 year

value: Bradley Bernstein, Broad

value: ENCBS721DMB at ENCODE; https://www.encodeproject.org/ENCBS721DMB/

value: Derived from ENCODE donor ENCDO180HAI; https://www.encodeproject.org/ENCDO180HAI/


title: Histone ChIP-seq from pancreas (ENCLB682VOY)

description:
https://www.encodeproject.org/experiments/ENCSR137ZID/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on pancreas female adult (41 years)
experiment encode accession: ENCSR137ZID
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR462ZQL
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB682VOY
fragmentation methods: sonication (generic)
size range: 200-600

value: pancreas

value: female

value: DM:no; HTN:no; CAD:no

value: 41 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS212NYF at ENCODE; https://www.encodeproject.org/ENCBS212NYF/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: Histone ChIP-seq from skin epidermis (ENCLB359OGR)

description:
https://www.encodeproject.org/experiments/ENCSR531VWS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq of keratinocyte basal cell carcinoma male adult (77 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR531VWS
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR465UAX
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB359OGR
fragmentation methods: none
size range: 200-600

source_name: Homo sapiens male adult (77 years) skin epidermis tissue with basal cell carcinoma

value: skin epidermis

value: tissue

value: BCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: male

value: keratinocyte carcinoma surgical removal

value: adult

value: 77 year

value: ENCBS606CVB at ENCODE; https://www.encodeproject.org/ENCBS606CVB/

value: Derived from ENCODE donor ENCDO739SDJ; https://www.encodeproject.org/ENCDO739SDJ/


title: Histone ChIP-seq from skin epidermis (ENCLB159UWQ)

description:
https://www.encodeproject.org/experiments/ENCSR560BEL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq of keratinocyte basal cell carcinoma female adult (48 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR560BEL
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR111ZAD
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB159UWQ
fragmentation methods: none
size range: 200-600

source_name: Homo sapiens female adult (48 years) skin epidermis tissue with basal cell carcinoma

value: keratinocyte carcinoma surgical removal. transplant recipient, iatrogenically immunosuppressed

value: 48 year

value: Bradley Bernstein, Broad

value: Maryam M. Asgari, MD, MPH

value: ENCBS365XEJ at ENCODE; https://www.encodeproject.org/ENCBS365XEJ/

value: Derived from ENCODE donor ENCDO615YQP; https://www.encodeproject.org/ENCDO615YQP/


title: Control ChIP-seq from skin epidermis (ENCLB583OPG)

description:
https://www.encodeproject.org/experiments/ENCSR529OPX/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of keratinocyte squamous cell carcinoma female adult (71 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR529OPX
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB583OPG
size range: 200-600

source_name: Homo sapiens female adult (71 years) skin epidermis tissue with squamous cell carcinoma

value: SCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: female

value: 71 year

value: ENCBS607OCB at ENCODE; https://www.encodeproject.org/ENCBS607OCB/

value: Derived from ENCODE donor ENCDO588YPS; https://www.encodeproject.org/ENCDO588YPS/


title: Histone ChIP-seq from heart left ventricle (ENCLB296HBP)

description:
https://www.encodeproject.org/experiments/ENCSR848BXL/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me1 ChIP-seq on heart left ventricle female adult (46 years)
experiment encode accession: ENCSR848BXL
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR403VPZ
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB296HBP
fragmentation methods: sonication (generic)
size range: 200-600
nucleic acid starting quantity: 43
nucleic acid starting quantity units: ng

value: heart left ventricle

value: tissue

value: DM:no; HTN:no; CAD:no

value: 46 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS273XUE at ENCODE; https://www.encodeproject.org/ENCBS273XUE/

value: Derived from ENCODE donor ENCDO411EVD; https://www.encodeproject.org/ENCDO411EVD/


title: Histone ChIP-seq from esophagus muscularis mucosa (ENCLB278SDB)

description:
https://www.encodeproject.org/experiments/ENCSR077HGR/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR077HGR
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR777AJC
encode release date: 2018-12-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB278SDB
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (54 years) esophagus muscularis mucosa tissue

value: esophagus muscularis mucosa

value: EnTEX:Esophagus - Muscularis

value: male

value: adult

value: 54 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS390MKW at ENCODE; https://www.encodeproject.org/ENCBS390MKW/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from heart left ventricle (ENCLB475LOK)

description:
https://www.encodeproject.org/experiments/ENCSR848BXL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me1 ChIP-seq on heart left ventricle female adult (46 years)
experiment encode accession: ENCSR848BXL
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR403VPZ
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB475LOK
fragmentation methods: sonication (generic)
size range: 200-600
nucleic acid starting quantity: 43
nucleic acid starting quantity units: ng

value: heart left ventricle

value: female


title: Histone ChIP-seq from gastrocnemius medialis (ENCLB383EVA)

description:
https://www.encodeproject.org/experiments/ENCSR499VCQ/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR499VCQ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR138WRC
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB383EVA
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (51 years) gastrocnemius medialis tissue

value: gastrocnemius medialis

value: tissue

value: i.e. REMC 6, 13, 14 and 15; EnTEX:Muscle - Skeletal also gastrocnemius medialis

value: 51 year

value: ENCBS731GTN at ENCODE; https://www.encodeproject.org/ENCBS731GTN/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from gastrocnemius medialis (ENCLB111YNA)

description:
https://www.encodeproject.org/experiments/ENCSR499VCQ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR499VCQ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR138WRC
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB111YNA
fragmentation methods: none
size range: 200-600

value: i.e. REMC 6, 13, 14 and 15; EnTEX:Muscle - Skeletal also gastrocnemius medialis\n

value: ENCBS640TBC at ENCODE; https://www.encodeproject.org/ENCBS640TBC/


title: Histone ChIP-seq from pancreas (ENCLB753CHF)

description:
https://www.encodeproject.org/experiments/ENCSR847FTJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on pancreas female adult (41 years)
experiment encode accession: ENCSR847FTJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR462ZQL
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB753CHF
fragmentation methods: sonication (generic)
size range: 200-600

value: pancreas

value: DM:no; HTN:no; CAD:no

value: 41 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS212NYF at ENCODE; https://www.encodeproject.org/ENCBS212NYF/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: Histone ChIP-seq from esophagus muscularis mucosa (ENCLB578DZR)

description:
https://www.encodeproject.org/experiments/ENCSR077HGR/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR077HGR
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR777AJC
encode release date: 2018-12-14
lab: Bradley Bernstein, Broad
library encode accession: ENCLB578DZR
fragmentation methods: sonication (generic)
size range: 200-600

value: esophagus muscularis mucosa

value: EnTEX:Esophagus - Muscularis

value: male

value: adult

value: 54 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS390MKW at ENCODE; https://www.encodeproject.org/ENCBS390MKW/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from pancreas (ENCLB114BHE)

description:
https://www.encodeproject.org/experiments/ENCSR847FTJ/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on pancreas female adult (41 years)
experiment encode accession: ENCSR847FTJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR462ZQL
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB114BHE
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue

value: female


title: Control ChIP-seq from lower lobe of left lung (ENCLB418ZSS)

description:
https://www.encodeproject.org/experiments/ENCSR846VGG/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR846VGG
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB418ZSS
size range: 200-600

source_name: Homo sapiens female adult (59 years) lower lobe of left lung tissue, preserved by flash-freezing

value: lower lobe of left lung

value: DM:yes; HTN:yes; CAD:no

value: 59 year

value: ENCBS493HET at ENCODE; https://www.encodeproject.org/ENCBS493HET/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: Control ChIP-seq from skin epidermis (ENCLB956SZL)

description:
https://www.encodeproject.org/experiments/ENCSR360NJD/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of skin epidermis male adult (78 years). Note that tissue excised from donor is adjacent epidermis from Mohs cancer removal procedure.
experiment encode accession: ENCSR360NJD
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB956SZL
size range: 200-600

source_name: Homo sapiens male adult (78 years) skin epidermis tissue

value: skin epidermis

value: tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari. These cells contain no tumor.

value: keratinocyte carcinoma surgical removal

value: 78 year

value: Maryam M. Asgari, MD, MPH

value: ENCBS792ZTG at ENCODE; https://www.encodeproject.org/ENCBS792ZTG/

value: Derived from ENCODE donor ENCDO054KII; https://www.encodeproject.org/ENCDO054KII/


title: Histone ChIP-seq from spleen (ENCLB526ZCI)

description:
https://www.encodeproject.org/experiments/ENCSR401KZW/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on spleen male adult (26 years)
experiment encode accession: ENCSR401KZW
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR200QAA
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB526ZCI
fragmentation methods: sonication (generic)
size range: 200-600

value: spleen

value: male

value: DM:no; HTN:no; CAD:no

value: adult

value: 26 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS498SQU at ENCODE; https://www.encodeproject.org/ENCBS498SQU/

value: Derived from ENCODE donor ENCDO221IPH; https://www.encodeproject.org/ENCDO221IPH/


title: Histone ChIP-seq from gastrocnemius medialis (ENCLB057YLO)

description:
https://www.encodeproject.org/experiments/ENCSR499VCQ/
***************
biological replicate number: 1
technical replicate number: 3
description:
experiment encode accession: ENCSR499VCQ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR138WRC
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB057YLO
fragmentation methods: sonication (generic)
size range: 200-600

value: gastrocnemius medialis

value: tissue

value: i.e. REMC 6, 13, 14 and 15; EnTEX:Muscle - Skeletal also gastrocnemius medialis

value: female

value: 51 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS731GTN at ENCODE; https://www.encodeproject.org/ENCBS731GTN/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from stomach (ENCLB886IHL)

description:
https://www.encodeproject.org/experiments/ENCSR063HOI/
***************
biological replicate number: 1
technical replicate number: 2
description:
experiment encode accession: ENCSR063HOI
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR962EJE
encode release date: 2019-02-12
lab: Bradley Bernstein, Broad
library encode accession: ENCLB886IHL
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (54 years) stomach tissue

value: stomach

value: male

value: 54 year

value: ENCBS443LLE at ENCODE; https://www.encodeproject.org/ENCBS443LLE/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB060JLA)

description:
https://www.encodeproject.org/experiments/ENCSR842LST/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on lower lobe of left lung male adult (60 years)
experiment encode accession: ENCSR842LST
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR089ZLR
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB060JLA
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (60 years) lower lobe of left lung tissue, preserved by flash-freezing

value: lower lobe of left lung

value: DM:no; HTN:yes; CAD:no; lungs with severe emphysema

value: adult

value: 60 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS105KGA at ENCODE; https://www.encodeproject.org/ENCBS105KGA/

value: Derived from ENCODE donor ENCDO520EJG; https://www.encodeproject.org/ENCDO520EJG/


title: Histone ChIP-seq from stomach (ENCLB001DNE)

description:
https://www.encodeproject.org/experiments/ENCSR063HOI/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR063HOI
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR962EJE
encode release date: 2019-02-12
lab: Bradley Bernstein, Broad
library encode accession: ENCLB001DNE
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue

value: Bradley Bernstein, Broad


title: Histone ChIP-seq from gastrocnemius medialis (ENCLB386GDI)

description:
https://www.encodeproject.org/experiments/ENCSR499VCQ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR499VCQ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR138WRC
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB386GDI
fragmentation methods: sonication (generic)
size range: 200-600

value: gastrocnemius medialis

value: i.e. REMC 6, 13, 14 and 15; EnTEX:Muscle - Skeletal also gastrocnemius medialis

value: female

value: 51 year

value: Kristin Ardlie

value: ENCBS731GTN at ENCODE; https://www.encodeproject.org/ENCBS731GTN/


title: Control ChIP-seq from lower lobe of left lung (ENCLB968INI)

description:
https://www.encodeproject.org/experiments/ENCSR846VGG/
***************
biological replicate number: 1
technical replicate number: 3
description: Control ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR846VGG
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB968INI
size range: 200-600

value: DM:yes; HTN:yes; CAD:no

value: 59 year

value: ENCBS493HET at ENCODE; https://www.encodeproject.org/ENCBS493HET/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB149GVY)

description:
https://www.encodeproject.org/experiments/ENCSR842LST/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 ChIP-seq on lower lobe of left lung male adult (60 years)
experiment encode accession: ENCSR842LST
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR089ZLR
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB149GVY
fragmentation methods: sonication (generic)
size range: 200-600

value: lower lobe of left lung

value: male

value: DM:no; HTN:yes; CAD:no; lungs with severe emphysema

value: adult

value: 60 year


title: Control ChIP-seq from heart right ventricle (ENCLB581SFA)

description:
https://www.encodeproject.org/experiments/ENCSR839VEU/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on heart right ventricle male adult (40 years)
experiment encode accession: ENCSR839VEU
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB581SFA
size range: 200-600

source_name: Homo sapiens male adult (40 years) heart right ventricle tissue, preserved by flash-freezing

value: heart right ventricle

value: tissue

value: DM:no; HTN:yes; CAD:no

value: 40 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS480XPH at ENCODE; https://www.encodeproject.org/ENCBS480XPH/

value: Derived from ENCODE donor ENCDO392CRK; https://www.encodeproject.org/ENCDO392CRK/


title: Control ChIP-seq from heart right ventricle (ENCLB713YBR)

description:
https://www.encodeproject.org/experiments/ENCSR839VEU/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on heart right ventricle male adult (40 years)
experiment encode accession: ENCSR839VEU
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB713YBR
size range: 200-600


title: Control ChIP-seq from pancreas (ENCLB313RUF)

description:
https://www.encodeproject.org/experiments/ENCSR130HAG/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on pancreas female adult (61 years)
experiment encode accession: ENCSR130HAG
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB313RUF
size range: 200-600

source_name: Homo sapiens female adult (61 years) pancreas tissue, preserved by flash-freezing

value: pancreas

value: female

value: DM:no; HTN:no; CAD:no; lungs with moderate emphysema

value: 61 year

value: ENCBS297KRV at ENCODE; https://www.encodeproject.org/ENCBS297KRV/

value: Derived from ENCODE donor ENCDO186XRB; https://www.encodeproject.org/ENCDO186XRB/


title: Histone ChIP-seq from tibial artery (ENCLB737MOM)

description:
https://www.encodeproject.org/experiments/ENCSR342FPJ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR342FPJ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR819JOI
encode release date: 2018-12-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB737MOM
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (54 years) tibial artery tissue

value: tibial artery

value: EnTEX:Artery - Tibial

value: male

value: 54 year

value: Bradley Bernstein, Broad

value: ENCBS736PQK at ENCODE; https://www.encodeproject.org/ENCBS736PQK/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from tibial artery (ENCLB952YDE)

description:
https://www.encodeproject.org/experiments/ENCSR342FPJ/
***************
biological replicate number: 1
technical replicate number: 1
description:
experiment encode accession: ENCSR342FPJ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR819JOI
encode release date: 2018-12-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB952YDE
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue

value: adult

value: ENCBS646JZQ at ENCODE; https://www.encodeproject.org/ENCBS646JZQ/


title: Histone ChIP-seq from skin epidermis (ENCLB164OSE)

description:
https://www.encodeproject.org/experiments/ENCSR340ZTB/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq of skin epidermis female adult (80 years). Note that tissue excised from donor is adjacent epidermis from Mohs cancer removal procedure.
experiment encode accession: ENCSR340ZTB
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR621OKB
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB164OSE
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (80 years) skin epidermis tissue

value: skin epidermis

value: tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari. These cells contain no tumor.

value: keratinocyte carcinoma surgical removal

value: 80 year

value: Maryam M. Asgari, MD, MPH

value: ENCBS115YGN at ENCODE; https://www.encodeproject.org/ENCBS115YGN/

value: Derived from ENCODE donor ENCDO856JFL; https://www.encodeproject.org/ENCDO856JFL/


title: Control ChIP-seq from skin epidermis (ENCLB854YVB)

description:
https://www.encodeproject.org/experiments/ENCSR071DPR/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of keratinocyte squamous cell carcinoma male adult (75 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR071DPR
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB854YVB
size range: 200-600

source_name: Homo sapiens male adult (75 years) skin epidermis tissue with squamous cell carcinoma

value: SCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: 75 year

value: ENCBS073GVF at ENCODE; https://www.encodeproject.org/ENCBS073GVF/

value: Derived from ENCODE donor ENCDO317WFZ; https://www.encodeproject.org/ENCDO317WFZ/


title: Histone ChIP-seq from spleen (ENCLB435BUS)

description:
https://www.encodeproject.org/experiments/ENCSR123ASL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on spleen female adult (41 years)
experiment encode accession: ENCSR123ASL
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR749YQP
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB435BUS
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (41 years) spleen tissue, preserved by flash-freezing

value: spleen

value: female

value: DM:no; HTN:no; CAD:no

value: 41 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS248EXJ at ENCODE; https://www.encodeproject.org/ENCBS248EXJ/

value: Derived from ENCODE donor ENCDO575WHY; https://www.encodeproject.org/ENCDO575WHY/


title: Control ChIP-seq from pancreas (ENCLB503OYF)

description:
https://www.encodeproject.org/experiments/ENCSR130HAG/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on pancreas female adult (61 years)
experiment encode accession: ENCSR130HAG
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB503OYF
size range: 200-600

value: pancreas

value: tissue

value: DM:no; HTN:no; CAD:no; lungs with moderate emphysema

value: adult

value: 61 year

value: ENCBS297KRV at ENCODE; https://www.encodeproject.org/ENCBS297KRV/

value: Derived from ENCODE donor ENCDO186XRB; https://www.encodeproject.org/ENCDO186XRB/


title: Histone ChIP-seq from spleen (ENCLB916VZJ)

description:
https://www.encodeproject.org/experiments/ENCSR123ASL/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27me3 ChIP-seq on spleen female adult (41 years)
experiment encode accession: ENCSR123ASL
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR749YQP
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB916VZJ
fragmentation methods: sonication (generic)
size range: 200-600


title: Control ChIP-seq from skin epidermis (ENCLB576IMI)

description:
https://www.encodeproject.org/experiments/ENCSR033XKQ/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of skin epidermis female adult (66 years). Note that tissue excised from donor is adjacent epidermis from Mohs cancer removal procedure.
experiment encode accession: ENCSR033XKQ
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB576IMI
size range: 200-600

source_name: Homo sapiens female adult (66 years) skin epidermis tissue

value: skin epidermis

value: tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari. These cells contain no tumor.

value: keratinocyte carcinoma surgical removal

value: 66 year

value: Bradley Bernstein, Broad

value: Maryam M. Asgari, MD, MPH

value: ENCBS826CAW at ENCODE; https://www.encodeproject.org/ENCBS826CAW/

value: Derived from ENCODE donor ENCDO017WNO; https://www.encodeproject.org/ENCDO017WNO/


title: Histone ChIP-seq from skin epidermis (ENCLB581IFV)

description:
https://www.encodeproject.org/experiments/ENCSR339XMR/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq of keratinocyte basal cell carcinoma male adult (58 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR339XMR
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR564GJK
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB581IFV
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (58 years) skin epidermis tissue with basal cell carcinoma

value: BCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: male

value: keratinocyte carcinoma surgical removal. transplant recipient, iatrogenically immunosuppressed

value: 58 year

value: ENCBS486NQD at ENCODE; https://www.encodeproject.org/ENCBS486NQD/

value: Derived from ENCODE donor ENCDO536XJQ; https://www.encodeproject.org/ENCDO536XJQ/


title: Control ChIP-seq from lower lobe of left lung (ENCLB214FYD)

description:
https://www.encodeproject.org/experiments/ENCSR846VGG/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on lower lobe of left lung female adult (59 years)
experiment encode accession: ENCSR846VGG
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB214FYD
size range: 200-600

value: lower lobe of left lung

value: tissue

value: female

value: DM:yes; HTN:yes; CAD:no

value: adult

value: 59 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS493HET at ENCODE; https://www.encodeproject.org/ENCBS493HET/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: Histone ChIP-seq from spleen (ENCLB367DEP)

description:
https://www.encodeproject.org/experiments/ENCSR831EDZ/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR831EDZ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB367DEP
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (51 years) spleen tissue

value: spleen

value: 51 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS892ESJ at ENCODE; https://www.encodeproject.org/ENCBS892ESJ/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Control ChIP-seq from skin epidermis (ENCLB493RQM)

description:
https://www.encodeproject.org/experiments/ENCSR306YLG/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq of keratinocyte squamous cell carcinoma male adult (78 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR306YLG
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-09-03
lab: Bradley Bernstein, Broad
library encode accession: ENCLB493RQM
size range: 200-600

source_name: Homo sapiens male adult (78 years) skin epidermis tissue with squamous cell carcinoma

value: skin epidermis

value: SCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: male

value: keratinocyte carcinoma surgical removal

value: 78 year

value: Maryam M. Asgari, MD, MPH

value: ENCBS198XCO at ENCODE; https://www.encodeproject.org/ENCBS198XCO/

value: Derived from ENCODE donor ENCDO054KII; https://www.encodeproject.org/ENCDO054KII/


title: Histone ChIP-seq from spleen (ENCLB843VRX)

description:
https://www.encodeproject.org/experiments/ENCSR831EDZ/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR831EDZ
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB843VRX
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue

value: female

value: adult


title: Histone ChIP-seq from skin epidermis (ENCLB819RLZ)

description:
https://www.encodeproject.org/experiments/ENCSR321KDV/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq of keratinocyte squamous cell carcinoma female adult (71 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR321KDV
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR529OPX
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB819RLZ
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (71 years) skin epidermis tissue with squamous cell carcinoma

value: 71 year

value: ENCBS607OCB at ENCODE; https://www.encodeproject.org/ENCBS607OCB/

value: Derived from ENCODE donor ENCDO588YPS; https://www.encodeproject.org/ENCDO588YPS/


title: Histone ChIP-seq from spleen (ENCLB978ZPZ)

description:
https://www.encodeproject.org/experiments/ENCSR122MPC/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq on spleen female adult (59 years)
experiment encode accession: ENCSR122MPC
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR955OYW
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB978ZPZ
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (59 years) spleen tissue, preserved by flash-freezing

value: spleen

value: DM:yes; HTN:yes; CAD:no

value: 59 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS297MNR at ENCODE; https://www.encodeproject.org/ENCBS297MNR/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: Histone ChIP-seq from spleen (ENCLB684RFX)

description:
https://www.encodeproject.org/experiments/ENCSR377ILM/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR377ILM
assay title: Histone ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR803JPO
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB684RFX
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (54 years) spleen tissue

value: male

value: 54 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: ENCBS949QWK at ENCODE; https://www.encodeproject.org/ENCBS949QWK/

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/


title: Histone ChIP-seq from spleen (ENCLB791KWP)

description:
https://www.encodeproject.org/experiments/ENCSR122MPC/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on spleen female adult (59 years)
experiment encode accession: ENCSR122MPC
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR955OYW
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB791KWP
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue

value: female

value: adult


title: Histone ChIP-seq from spleen (ENCLB537ADU)

description:
https://www.encodeproject.org/experiments/ENCSR122MPC/
***************
biological replicate number: 1
technical replicate number: 3
description: H3K4me3 ChIP-seq on spleen female adult (59 years)
experiment encode accession: ENCSR122MPC
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR955OYW
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB537ADU
fragmentation methods: sonication (generic)
size range: 200-600


title: Histone ChIP-seq from spleen (ENCLB707RUO)

description:
https://www.encodeproject.org/experiments/ENCSR377ILM/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR377ILM
assay title: Histone ChIP-seq
assembly: hg19, GRCh38
possible controls: ENCSR803JPO
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB707RUO
fragmentation methods: sonication (generic)
size range: 200-600
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500


title: Histone ChIP-seq from skin epidermis (ENCLB849PVN)

description:
https://www.encodeproject.org/experiments/ENCSR291PVS/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K4me3 ChIP-seq of keratinocyte squamous cell carcinoma male adult (78 years). Note that tissue excised from donor is cancerous.
experiment encode accession: ENCSR291PVS
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR306YLG
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB849PVN
fragmentation methods: none
size range: 200-600

value: skin epidermis

value: SCC tumor tissue collected during keratinocyte carcinoma removal surgery under supervision of Maryam Asgari.

value: keratinocyte carcinoma surgical removal

value: 78 year

value: Maryam M. Asgari, MD, MPH

value: ENCBS198XCO at ENCODE; https://www.encodeproject.org/ENCBS198XCO/

value: Derived from ENCODE donor ENCDO054KII; https://www.encodeproject.org/ENCDO054KII/


title: Histone ChIP-seq from spleen (ENCLB161HZJ)

description:
https://www.encodeproject.org/experiments/ENCSR589DBF/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR589DBF
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB161HZJ
fragmentation methods: sonication (generic)
size range: 200-600

value: spleen

value: 51 year

value: ENCBS892ESJ at ENCODE; https://www.encodeproject.org/ENCBS892ESJ/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Control ChIP-seq from heart left ventricle (ENCLB431UEM)

description:
https://www.encodeproject.org/experiments/ENCSR120ITZ/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on heart left ventricle female adult (59 years)
experiment encode accession: ENCSR120ITZ
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB431UEM
size range: 200-600

source_name: Homo sapiens female adult (59 years) heart left ventricle tissue, preserved by flash-freezing

value: heart left ventricle

value: DM:yes; HTN:yes; CAD:no

value: 59 year

value: Michael Snyder, Stanford

value: Yiing Lin, MD, PhD

value: ENCBS830TZX at ENCODE; https://www.encodeproject.org/ENCBS830TZX/

value: Derived from ENCODE donor ENCDO856ZOJ; https://www.encodeproject.org/ENCDO856ZOJ/


title: Control ChIP-seq from heart left ventricle (ENCLB718YUQ)

description:
https://www.encodeproject.org/experiments/ENCSR120ITZ/
***************
biological replicate number: 1
technical replicate number: 2
description: Control ChIP-seq on heart left ventricle female adult (59 years)
experiment encode accession: ENCSR120ITZ
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB718YUQ
size range: 200-600

value: tissue

value: female

value: adult


title: Histone ChIP-seq from spleen (ENCLB402EIG)

description:
https://www.encodeproject.org/experiments/ENCSR826MTK/
***************
biological replicate number: 2
technical replicate number: 1
description:
experiment encode accession: ENCSR826MTK
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB402EIG
fragmentation methods: sonication (generic)
size range: 200-600
instrument models: Illumina NextSeq 500,Illumina HiSeq 2500

value: Bradley Bernstein, Broad

value: Kristin Ardlie


title: Histone ChIP-seq from heart left ventricle (ENCLB468UMX)

description:
https://www.encodeproject.org/experiments/ENCSR371UJJ/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K36me3 ChIP-seq on heart left ventricle female adult (46 years)
experiment encode accession: ENCSR371UJJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR403VPZ
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB468UMX
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens female adult (46 years) heart left ventricle tissue, preserved by flash-freezing

value: DM:no; HTN:no; CAD:no

value: 46 year

value: ENCBS273XUE at ENCODE; https://www.encodeproject.org/ENCBS273XUE/

value: Derived from ENCODE donor ENCDO411EVD; https://www.encodeproject.org/ENCDO411EVD/


title: Histone ChIP-seq from spleen (ENCLB441LXE)

description:
https://www.encodeproject.org/experiments/ENCSR589DBF/
***************
biological replicate number: 2
technical replicate number: 2
description:
experiment encode accession: ENCSR589DBF
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR711URW
encode release date: 2019-09-11
lab: Bradley Bernstein, Broad
library encode accession: ENCLB441LXE
fragmentation methods: sonication (generic)
size range: 200-600

value: spleen

value: 51 year

value: ENCBS892ESJ at ENCODE; https://www.encodeproject.org/ENCBS892ESJ/

value: Derived from ENCODE donor ENCDO271OUW; https://www.encodeproject.org/ENCDO271OUW/


title: Histone ChIP-seq from heart left ventricle (ENCLB016HUQ)

description:
https://www.encodeproject.org/experiments/ENCSR371UJJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K36me3 ChIP-seq on heart left ventricle female adult (46 years)
experiment encode accession: ENCSR371UJJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR403VPZ
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB016HUQ
fragmentation methods: sonication (generic)
size range: 200-600

value: heart left ventricle

value: Michael Snyder, Stanford


title: Histone ChIP-seq from heart right ventricle (ENCLB209JTP)

description:
https://www.encodeproject.org/experiments/ENCSR370OQJ/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K27ac ChIP-seq on heart right ventricle male adult (40 years)
experiment encode accession: ENCSR370OQJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR839VEU
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB209JTP
fragmentation methods: sonication (generic)
size range: 200-600

value: heart right ventricle

value: male

value: DM:no; HTN:yes; CAD:no

value: 40 year

value: Yiing Lin, MD, PhD

value: ENCBS480XPH at ENCODE; https://www.encodeproject.org/ENCBS480XPH/

value: Derived from ENCODE donor ENCDO392CRK; https://www.encodeproject.org/ENCDO392CRK/


title: Histone ChIP-seq from heart right ventricle (ENCLB142WXD)

description:
https://www.encodeproject.org/experiments/ENCSR370OQJ/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27ac ChIP-seq on heart right ventricle male adult (40 years)
experiment encode accession: ENCSR370OQJ
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR839VEU
encode release date: 2020-09-15
lab: Bradley Bernstein, Broad
library encode accession: ENCLB142WXD
fragmentation methods: sonication (generic)
size range: 200-600

value: tissue

value: adult


title: Histone ChIP-seq from esophagus squamous epithelium (ENCLB295FVY)

description:
https://www.encodeproject.org/experiments/ENCSR024JJL/
***************
biological replicate number: 1
technical replicate number: 1
description: H3K27me3 ChIP-seq on esophagus squamous epithelium male adult (54 years)
experiment encode accession: ENCSR024JJL
assay title: Histone ChIP-seq
assembly: GRCh38, hg19
possible controls: ENCSR644XSS
encode release date: 2021-01-28
lab: Bradley Bernstein, Broad
library encode accession: ENCLB295FVY
fragmentation methods: sonication (generic)
size range: 200-600

source_name: Homo sapiens male adult (54 years) esophagus squamous epithelium tissue

value: esophagus squamous epithelium

value: EnTEX:Esophagus - Mucosa

value: 54 year

value: Bradley Bernstein, Broad

value: Kristin Ardlie

value: Derived from ENCODE donor ENCDO451RUA; https://www.encodeproject.org/ENCDO451RUA/

value: ENCBS143WXN at ENCODE; https://www.encodeproject.org/ENCBS143WXN/


title: Control ChIP-seq from lower lobe of left lung (ENCLB587MOM)

description:
https://www.encodeproject.org/experiments/ENCSR089ZLR/
***************
biological replicate number: 1
technical replicate number: 1
description: Control ChIP-seq on lower lobe of left lung male adult (60 years)
experiment encode accession: ENCSR089ZLR
assay title: Control ChIP-seq
assembly: GRCh38
encode release date: 2020-07-06
lab: Bradley Bernstein, Broad
library encode accession: ENCLB587MOM
size range: 200-600

source_name: Homo sapiens male adult (60 years) lower lobe of left lung tissue, preserved by flash-freezing

value: lower lobe of left lung

value: DM:no; HTN:yes; CAD:no; lungs with severe emphysema

value: 60 year

value: Michael Snyder, Stanford

value: ENCBS105KGA at ENCODE; https://www.encodeproject.org/ENCBS105KGA/

value: Derived from ENCODE donor ENCDO520EJG; https://www.encodeproject.org/ENCDO520EJG/


title: Histone ChIP-seq from lower lobe of left lung (ENCLB605BFN)

description:
https://www.encodeproject.org/experiments/ENCSR368BOE/
***************
biological replicate number: 1
technical replicate number: 2
description: H3K4me3 ChIP-seq on lower lobe of left lung male adult (60 years)
experiment encode accession: ENCSR368BOE
assay title: Histone ChIP-seq
assembly: GRCh38
possible controls: ENCSR089ZLR
encode release date: 2020-09-10
lab: Bradley Bernstein, Broad
library encode accession: ENCLB605BFN
fragmentation methods: sonication (generic)
size range: 200-600

value: male

value: Yiing Lin, MD, PhD